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Conserved domains on  [gi|1170501128|emb|SLY92125|]
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putative outer membrane protein N precursor [Klebsiella variicola]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
div_DrpB_YedR NF038392
cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division ...
 2-86 2.10e-45

cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division protein with a limited taxonomic range, found in enteric bacteria such as Escherichia coli.


:

Pssm-ID: 439684  Cd Length: 86  Bit Score: 140.60  E-value: 2.10e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1170501128  2 EEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDLGTTAGKWLGALLGMLVLAGIGAILGAVVWY 81
Cdd:NF038392   1 EEKATRSPGGKLALWVFYAFCGYFVWAMVRYVWVVSRIQSVPGAGIEGDLGSTSGKWLGALLGFLVLGVVGAILGGIAWY 80


                 ....*
gi 1170501128 82 TRPSR 86
Cdd:NF038392  81 TRPRQ 85
 
Name Accession Description Interval E-value
div_DrpB_YedR NF038392
cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division ...
 2-86 2.10e-45

cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division protein with a limited taxonomic range, found in enteric bacteria such as Escherichia coli.


Pssm-ID: 439684  Cd Length: 86  Bit Score: 140.60  E-value: 2.10e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1170501128  2 EEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDLGTTAGKWLGALLGMLVLAGIGAILGAVVWY 81
Cdd:NF038392   1 EEKATRSPGGKLALWVFYAFCGYFVWAMVRYVWVVSRIQSVPGAGIEGDLGSTSGKWLGALLGFLVLGVVGAILGGIAWY 80


                 ....*
gi 1170501128 82 TRPSR 86
Cdd:NF038392  81 TRPRQ 85
 
Name Accession Description Interval E-value
div_DrpB_YedR NF038392
cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division ...
 2-86 2.10e-45

cell division protein DrpB; DrpB (division ring protein B) is a non-essential cell division protein with a limited taxonomic range, found in enteric bacteria such as Escherichia coli.


Pssm-ID: 439684  Cd Length: 86  Bit Score: 140.60  E-value: 2.10e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1170501128  2 EEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDLGTTAGKWLGALLGMLVLAGIGAILGAVVWY 81
Cdd:NF038392   1 EEKATRSPGGKLALWVFYAFCGYFVWAMVRYVWVVSRIQSVPGAGIEGDLGSTSGKWLGALLGFLVLGVVGAILGGIAWY 80


                 ....*
gi 1170501128 82 TRPSR 86
Cdd:NF038392  81 TRPRQ 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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