|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
3.68e-160 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 451.58 E-value: 3.68e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
....*....
gi 116734739 321 TTTPIAILM 329
Cdd:MTH00112 321 KNTLTATLT 329
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
1.95e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 386.47 E-value: 1.95e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSlNPTLMTTLAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHL-TK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLpST 319
|
330
....*....|
gi 116734739 320 PTTTPIAILM 329
Cdd:MTH00135 320 QLTLPLAIST 329
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
4.01e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 367.71 E-value: 4.01e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*....
gi 116734739 321 TTTPIAILM 329
Cdd:MTH00070 321 TNNLLSLTI 329
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
8.22e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 346.83 E-value: 8.22e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
....*
gi 116734739 321 TTTPI 325
Cdd:MTH00105 321 KPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
1.83e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 289.95 E-value: 1.83e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*....
gi 116734739 321 TTTPIAILM 329
Cdd:MTH00200 321 SNLLVGLLL 329
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-328 |
3.09e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 274.12 E-value: 3.09e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
....*...
gi 116734739 321 TTTPIAIL 328
Cdd:MTH00041 321 ITVYGVIL 328
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
7.96e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 210.84 E-value: 7.96e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 1 MNPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 81 SGqwditqLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILlltSNSLNPTLMTTLAIT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 161 STAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTyYSTITLPPNSTNYMKQWHLTKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKKKNKF 311
|
....*....
gi 116734739 321 TTTPIAILM 329
Cdd:MTH00160 312 SLILNFLSF 320
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
1.26e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 184.32 E-value: 1.26e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 11 MTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDItqlt 90
Cdd:MTH00144 11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS---- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 91 lptpSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPI-TILLLTSNSLNPTLMTTLAITSTAIGGWMG 169
Cdd:MTH00144 87 ----MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 170 LNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFnSTKAMTMTTLMTTWAKSPMLNATLMLVLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL-WSGDSGSMKDLGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 116734739 250 SLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTI 302
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-310 |
1.62e-53 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 178.82 E-value: 1.62e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 12 TLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSmanawsSGQWDITQLTL 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 92 PTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAITSTAIGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 172 QTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPMLNATLMLVLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 116734739 252 AGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTyYSTITLPPNSTN 310
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
10-302 |
3.28e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 154.44 E-value: 3.28e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 10 YMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMAnawssgqwdiTQL 89
Cdd:MTH00197 4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSL----------SFS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 90 TLPTPSIF---LTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPItiLLLTSNSLNPTLMTTLAITSTAIGG 166
Cdd:MTH00197 74 NLYLSLLSvvlVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPL--LILAFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 167 WMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPMLNATLML 246
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 116734739 247 VLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYSTI 302
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-299 |
1.62e-37 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 139.87 E-value: 1.62e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 14 ALGTTMTISSNHWVMAWVGLELNTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAILLF--------------SSMANA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 79 WSSGQWDITQLTLPTpsIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMK----FPPITILLLTSNSLNP--- 151
Cdd:COG1007 192 LAAGGANSPLLLLGL--VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwq 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 152 TLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSM--LTFYL--YVITTTTVFLTFNS-TKAMT 226
Cdd:COG1007 270 LLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLlSRKGG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 116734739 227 MTTLMTTWA----KSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYY 299
Cdd:COG1007 350 EAEEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.87e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 121.68 E-value: 1.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 13 LALGTTMTISSNHWVMAWVGLELNTLAIIPLI-SKSHHPRAVEAAIKYFLVQATASAILLFS-------------SMANA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 79 WSSGQWDITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMttLA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLI--GG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 159 ITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIII----IYNPKLSMLTFYLYVITTTTVF---LTFNSTKAMTMTTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 116734739 232 TTwAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-299 |
2.03e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 123.01 E-value: 2.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 14 ALGTTMTISSNHWVMAWVGLELNTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAILL--------------FSSMANA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 79 WSSGQwdITQLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMK---FPPIT-ILLLTSNSLNPT-- 152
Cdd:PRK05777 193 LADGS--GNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 153 -LMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSM--LTFYL--YVITTTTVF--LTFNSTKAM 225
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 116734739 226 TMTTLMTtWA----KSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYY 299
Cdd:PRK05777 351 EAESISD-FAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
5.25e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 116.27 E-value: 5.25e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 13 LALGTTMTISSNHWVMAWVGLELNTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 88 QLTLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTtlAITSTAIGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 168 MGLNQTQIRKILAFSSITHLGW----MTIIIIYNPKLSMLTFYLYVITTTTVF---LTFNSTKAMTMTTLMTTwAKSPML 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 116734739 241 NATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.80e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 5.80e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 23 SNHWVMAWVGLELNTLAIIPLI-SKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQLTLPTP------- 94
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 95 ----SIFLTTAIAMKLGLVPFHFWFPEVLQGT-TMTTALLLSTVMKFPPITILLLT------SNSLNPTLMTtLAITSTA 163
Cdd:pfam00361 81 llllFLLILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYGLIRRSllylpsSPFIQQILLI-LAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 164 IGGWMGLNQTQIRKILAFSSITHLGWMTIII----IYNPKLSMLTFYLYVITTTTVFLTFNS-----TKAMTMTTLMTTW 234
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....
gi 116734739 235 AKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-296 |
2.66e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 111.58 E-value: 2.66e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 8 ITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 87 TQLTLPTPS------------IFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMK---FPPITILLLT-----S 146
Cdd:TIGR01770 186 EDLLLFLSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYilfgfS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 147 NSLNPTLMTtLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSM--LTFYL--YVITTTTVFLTFNST 222
Cdd:TIGR01770 266 EAWQIFLAI-IAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 223 KamtmtTLMTTWAKS-----------PMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLF 291
Cdd:TIGR01770 345 R-----SYKDEWIEYisdfaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
....*
gi 116734739 292 FYLRL 296
Cdd:TIGR01770 420 YYLRV 424
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-305 |
1.58e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 98.39 E-value: 1.58e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 3 PHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAV---------EAAIKYFLVQATASAILLF- 72
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFg 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 73 ----------SSMANAWSSGQWDITQLTLPTPSI---FLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFppI 139
Cdd:MTH00198 267 calyfgftgnEGMLGTILSATLETTNIELRQGSLgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 140 TILLLTSNSLNPTLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVIT-TTTVFLT 218
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 219 F------------------------NSTKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQA 274
Cdd:MTH00198 425 FtvictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 116734739 275 MALTATIIAMLSLLGL-------FFYLRL--TYYSTITLP 305
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRIvaTIYFNFTRP 544
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-296 |
1.14e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.21 E-value: 1.14e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 10 YMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQL 89
Cdd:COG0651 113 FLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 90 ----------TLPTPSIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNP-------- 151
Cdd:COG0651 193 aarlaeldpgLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadpalflg 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 152 TLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVI----TTTTVFLT----FNSTK 223
Cdd:COG0651 273 TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLAagaiERATG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 116734739 224 AMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRL 296
Cdd:COG0651 353 TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-328 |
1.29e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 83.51 E-value: 1.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 7 LITYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHP-RAVEAAIKYFLVQATASAILL-------------- 71
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygfswlyglsggei 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 72 -FSSMANAWSSGQWDITQLTLPTPsIFLTTAIAMKLGLVPFHFWFPEVLQG-----------TTMTTALLLSTVMkfppI 139
Cdd:CHL00049 194 eLQEIVNGLINTQMYNSPGISIAL-IFITVGIGFKLSLAPFHQWTPDVYEGsptpvvaflsvTSKVAASALATRI----F 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 140 TILLLTSNSLNPTLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIII----YNPKLSMLTFYLYVI----- 210
Cdd:CHL00049 269 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsNDGYASMITYMLFYIfmnlg 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 211 TTTTVFLTFNSTKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGL 290
Cdd:CHL00049 349 TFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISI 428
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 116734739 291 FFYLRLTYYSTITLPPNSTNYMKQ---WHLTKPTTTPIAIL 328
Cdd:CHL00049 429 YYYLKIIKLLMTGRNQEITPYVRNyrrSPLRSNNSIELSMI 469
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
11-263 |
3.93e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 79.32 E-value: 3.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 11 MTLALGTTMTISSNHWVMAWVGLElnTLAIIPLISKSH---HPRAVEAAIKYFLVQATASAILLF-SSMANAWSSGQwdi 86
Cdd:PRK02504 117 LTATLGGMFLSGATELVMIFISLE--TLSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS--- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 87 TQLTLPTPSI-------------FLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFP----PITILLLTSNSL 149
Cdd:PRK02504 192 TQLSAIALALitspslglalalvFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 150 NP---TLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPK--LSMLTFYLYVI------TTTTVFLT 218
Cdd:PRK02504 272 DEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEagYASMVFYLLAYlfmnlgAFACVILF 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 116734739 219 FNSTKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 352 SLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
31-299 |
4.95e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.74 E-value: 4.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 31 VGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQL--------TLPTPSIFLTTAI 102
Cdd:PRK08375 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaenpTVVTAFGFVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 103 AMKLGLVPFHFWFPEVLQGTTMTTALLLS-TVMKFPPITILLLT---------SNSLNPTLMTTLAITSTAIGGWMGLNQ 172
Cdd:PRK08375 213 ALKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIRIYftvfggdfrFALGLGWLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 173 TQIRKILAFSSITHLGWMTIIIIYNPKLSML--TFYL--YVITTTTVFLTFNSTKAMTMTTLMTTWA----KSPMLNATL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIEVTYGTRRLSELSglgrRMPLTAAAF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 116734739 245 MLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYY 299
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-192 |
3.53e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.87 E-value: 3.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 38 LAIIP---LISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQW-----DITQLTLPTPS---IFLTTAI--AM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAqllLFLAFFIafAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 105 KLGLVPFHFWFPEVL-QGTTMTTALLLSTVMKFP-------PITILLLTSNSLNPTLMTtLAITSTAIGGWMGLNQTQIR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHvEAPTAGSVLLAGVLLKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170
....*....|....*.
gi 116734739 177 KILAFSSITHLGWMTI 192
Cdd:COG1008 301 RLIAYSSVSHMGFVLL 316
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
1.05e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.57 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 50 PRAVEAAIKYFLVQATASAILLFSSMANAWSSGQ-WDITQLTLPTPSIFLTT--------AIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 120 QGTTMTTALLLSTVMKFPPITILLL-------TSNSLNPTLMtTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 193 IIIYNPKLSMLTFYLYV----ITTTTVFL----TFNSTKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 116734739 265 LIIQELTKqamalTATIIAMLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
2.89e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.23 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 13 LALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATA------SAILLFSSMANAWSSGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 87 TQLTLPTP----------SIFLTTAIAMKLGLVPFHFWFPEV-LQGTTMTTALLLSTVMKFPPITIL----LLTSNSLNP 151
Cdd:PRK08676 191 TELAAHASllspsvlgasFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILrlsaLLRQSGAAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 152 T---LMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSM--LTFYLYVITTTTVFLTFNST---- 222
Cdd:PRK08676 271 QfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALfwMLFHMLAHSLVKSGLFFSAGilhr 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 116734739 223 --KAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLG---LFFYLR 295
Cdd:PRK08676 351 qyRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-293 |
2.97e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.24 E-value: 2.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 23 SNHWVMAWVGLELNTLAIIPLISKSHH-PRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQL-----TLPTPSI 96
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 97 FLTTAIAM------KLGLVPFHFWFPEVLQGTTMTTALLLSTVM---------KFPPITillltsnSLNPTLMTTLAI-- 159
Cdd:COG1009 210 LTLILLLLllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPLF-------ALSPVWLTVVAIig 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 160 TSTAI-GGWMGLNQTQIRKILAFSSITHLGWMTIIIiynpKLSMLTFYLYVITTTTVFltfnstKAMT------------ 226
Cdd:COG1009 283 AITALfAALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLTHAFF------KALLflgagsvihatg 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 116734739 227 ---MTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQE-LTKQAMALTATIIAMLSLLGLFFY 293
Cdd:COG1009 353 trdIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFY 423
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-288 |
3.30e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 58.02 E-value: 3.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 10 YMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLV------QATASAILLFSS--------- 74
Cdd:PRK06458 114 YQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvmgdge 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 75 MANAWSS-----GQWDITQLTLptPSIFLTTAIAMKLGLVPFHFWFPE-----------VLQGTTMTTALLlsTVMKFPP 138
Cdd:PRK06458 194 MAILWTEllkhaSLLDPTLMKL--AFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALY--AVLRYYI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 139 ITILLLTSNSLNPtLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVI----TTTT 214
Cdd:PRK06458 270 LIDAAIGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLnhslTKSA 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 215 VF------LTFNSTKAMTMTTLMTtwAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMaLTATIIAMLSLL 288
Cdd:PRK06458 349 IFfasgnvLQKYGTRDINVIRGLL--KVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGP-LLIAILLLLLLT 425
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-328 |
1.86e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.49 E-value: 1.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 30 WVGLELNTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAILLFssmANAWSSGQWD----------ITQLTLPTPSI-- 96
Cdd:PRK08376 147 FVFLEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLL---GIALLYGQYGtlnmaylavkMSENPTVVAKIal 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 97 -FLTTAIAMKLGLVPFHFWFPEVLQG--TTMTTALLLSTVMKFPPITILLLT--SNSLNPT----LMTTLAITSTAIGGW 167
Cdd:PRK08376 224 aLFIAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 168 MGLNQTQIRKILAFSSITHLGWMTI---IIIYNPKLSMLTFYLYVITTTTVFLTFNST--KAMTMTTLMTTW-------- 234
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGYMLLglgVGLAALGDPAMASYGEIALAGGIYHIVNHAlyKALLFLTAGAVIyetgtrnl 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 235 -------AKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIqELTKQAMALTATIIAMLSLLGLFFYLRLTYysTITLPPN 307
Cdd:PRK08376 384 nelgglaRTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIY-ESSALFNPILGVIAMIGSVLTLASFVKVFH--TAFFGPP 460
|
330 340
....*....|....*....|.
gi 116734739 308 STNYMKQWHLTKPTTTPIAIL 328
Cdd:PRK08376 461 SEKVMNVKEPPKPMLVPMLIL 481
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
2.42e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.39 E-value: 2.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 2 NPHAKLITYMTLALGTTMTISSNHWVMAWVGLELNTLA---IIPLISKshhpRAVEAAIKYFLVQATASAILLFSSMANA 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 79 WSSGQWDIT---QLTLPTPS--------IFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSN 147
Cdd:PRK08668 172 AKTGTFDFAdisQGLINDTStgfalivfLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 148 SLNPT-----------------LMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLS----MLTFY 206
Cdd:PRK08668 252 VLPGTklfsefgtyrgvplfnyILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 207 LYVITTTTVFLTFNS----TKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATII 282
Cdd:PRK08668 332 NHALFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
330
....*....|....*.
gi 116734739 283 AMLSLLGLFFYLRLTY 298
Cdd:PRK08668 412 FFGSIGSFLYVFRPLA 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
90-293 |
5.33e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.19 E-value: 5.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 90 TLPTPSIFLTTAIAMKLGLVPFhFWFPEVLQGTTMTTALLLSTVMK-------FPPITILLLTSNSLNPTLMTTLAITST 162
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 163 AIGGWMGLNQTQIRKILAFSSITHLGWMTI-IIIYNPK-LSMLTFYLY--VITTTTVFLTFNSTKAMTMTTLMTT----W 234
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVhdMVVKTALFLIAGSLVRLTGYRSLQYlgglY 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 116734739 235 AKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQ-ELTKQAMALTAT-----IIAMLSLLGLFFY 293
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALmlitsLITMYSLFRIFFL 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-283 |
1.01e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.77 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 109 VPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLltsnSLNPTL------MTTLAI---TSTAIGGWMGLNQTQIRKIL 179
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLA----RLNPVLggtplwQTILPLfggLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 180 AFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTT----TVFLTF----NSTKAMTMTTLMTTWAKSPMLNATLMLVLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAgiidHETGTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|....*
gi 116734739 252 AGLPPLTGFLPKWLI---IQELTKQAMALTATIIA 283
Cdd:PRK12647 368 AGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVL 402
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-277 |
4.58e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.02 E-value: 4.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 27 VMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQLTLPTPSIF--LTTAIAM 104
Cdd:PRK07234 117 ISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFalIALGLLV 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 105 KLGLVPFHFWFPEVLQGTTMTTALLLS-TVMK---FPPITILLLTSNSLNPtlMTTLAITSTAIGGWMGLNQTQIRKILA 180
Cdd:PRK07234 197 KGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 181 FSSITHLGWmtiiIIYNPklsmLTFYLYVITTTTVFLTFNSTKAMTMTTLMTTWAKSPMLNATLMLVLL---SLAGLPPL 257
Cdd:PRK07234 275 FSTISQLGF----ILAAP----LVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMasfSIAGFPLL 346
|
250 260
....*....|....*....|.
gi 116734739 258 TGFLPKWLIIQELTK-QAMAL 277
Cdd:PRK07234 347 AGFVSKVLTLKNLLPwQAIAL 367
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-291 |
6.22e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 47.66 E-value: 6.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 9 TYMTLALGTTMTISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFS-SMANAwSSGQWDIT 87
Cdd:PRK12665 116 TYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGiALVYA-ATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 88 QLTLPTPSI----------FLTTAIAMKLGLVPFHFWFPEVLQGT----TMTTALLLSTVMKFPPITI--LLLTSNSLNP 151
Cdd:PRK12665 195 DLAVRLDELpsgtrtalfaVLLVAFGIKAAVFPLSFWLPDSYPTApapvTAVFAGLLTKVGVYAIIRThtLLFPGGGLDT 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 152 TLMTtLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVI----TTTTVFLTF----NSTK 223
Cdd:PRK12665 275 LLMV-VALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAhhitVQTTLFLVVglieRQAG 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 116734739 224 AMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQ----ELTKQAMALTATIIAMlSLLGLF 291
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEagaeDGTWLAWALVAGGVVT-SLLTLY 424
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
3.43e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.58 E-value: 3.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 50 PRAVEAAIKYFLVQATASAILLFSSMA----NAWSSGQWDITQLTLPTPSIFLTT--------AIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 118 V-LQGTTMTTALLLSTVMK-------------FPpitillLTSNSLNPTLMTtLAITSTAIGGWMGLNQTQIRKILAFSS 183
Cdd:PRK05846 237 AhVQAPTAGSVLLAGILLKmgaygllrfslplFP------DASHEFAPIIIT-LGVIAIIYGALVALAQTDIKKLIAYSS 309
|
170
....*....|.
gi 116734739 184 ITHLGWMTIII 194
Cdd:PRK05846 310 ISHMGFVTLGI 320
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
30-298 |
8.17e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.25 E-value: 8.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 30 WVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQ-----LTLPTPSIFLTtAIAM 104
Cdd:PRK06277 126 YVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYG-GLLL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 105 KL-------GLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILL--------LTSNSLNPTLMTTLAITSTAIGGWMG 169
Cdd:PRK06277 205 LIfgllygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 170 LNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLY----VITTTTVFLTF----NSTKAMTMTTLMTTWAKSPMLN 241
Cdd:PRK06277 285 LLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHainhVIYKSALFLGAgivsYRTKTSNLRKLGGLLPVMPVVA 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 116734739 242 ATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTY 298
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
8.96e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.53 E-value: 8.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 80 SSGQWDITQL-TLPTPSIFLTTAIAM-------KLGLVPFHFWFPEVLQGTTMTTALLLSTVM---------KFPPItil 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 143 LLTSNSLNPTLMtTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPK------LSMLTfyLYVITTTTVF 216
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 116734739 217 LTF----NSTKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-267 |
9.79e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.95 E-value: 9.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 30 WVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFS-----------SMANAWSSGQWDITQLTLPTPSIFL 98
Cdd:PRK12662 136 YVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFI 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 99 TTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLS----TVMKFPPITI--------LLLTSNSLNPTLMTtLAITSTAIGG 166
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFNNVFMI-LAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 167 WMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVIT----TTTVFLT-------FNSTKamtMTTLMTTWA 235
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNhsivKSALFMVsgsisyhFGTTK---LEDCLNLWK 371
|
250 260 270
....*....|....*....|....*....|..
gi 116734739 236 KSPMLNATLMLVLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-285 |
1.04e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.81 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 33 LELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQLTLPTPS------IFLTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSlkylvfLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 107 GLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNP------TLMTTLAITSTAIGGWMGLNQTQIRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 181 FSSITHLGWMTIIIIYNP-------KLSMLTFYLYVITTTTVFLTFN----STKAMTMTTLMTTWAKSPMLNATLMLVLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAIlgsrlalEGSIAYIFNHAFAKSLFFLVAGalsySCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250 260 270
....*....|....*....|....*....|....*....
gi 116734739 250 SLAGLPPLTGFLPKWLIIQ---ELTKQAMALTATIIAML 285
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIFAagfELSVEYWILLPAMVLLL 420
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.20e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 43.66 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 107 GLVPFHFWFPEVLQGTTMTTALLLSTV-MKFPPITILLLTSNSLNPTL-----MTTLAITSTAIGGWMGLNQTQIRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 181 FSSITHLG--------WMTIIIIYNPKLSMLTFY--LYVITT-----TTVFL----TFNSTKAMTMTTLMTTWAKSPMLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNhslfkSVLFLgagsVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 116734739 242 ATLMLVLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
27-194 |
2.48e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.11 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 27 VMAWVGLELNTLAIIPLISKSHhPRAVEAAIKYFLVQAtASAILLFSSMANAwsSGQWDITQLTLPTPSIF------LTT 100
Cdd:PRK12650 133 VVLFVAWELVSLASFFLIARSG-SGGEAGSIRTLILTF-FGGLTLLAAVAIA--ATQTGTTSLSGILHSDVwaekpgLTT 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 101 AIAM--------KLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSL--NPT---LMTTLAITSTAIGGW 167
Cdd:PRK12650 209 VVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAV 288
|
170 180
....*....|....*....|....*..
gi 116734739 168 MGLNQTQIRKILAFSSITHLGWMTIII 194
Cdd:PRK12650 289 FAVQKTDLKKLTAYSTVSQLGWIVATI 315
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
4.37e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.25 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 111 FHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAIT-----STAIGGWMGLNQTQIRKILAFSSIT 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 186 HLGWMTIIIIYNPKLSMLTFYL--YVITTTTVFLTFNSTKAMTMTTLMTTWAKSPMLNA-----TLMLV-LLSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGSVIHSTTVDEQDMRKMGGLIHSipftyTMMLIgSFSIMGLPYL 403
|
170
....*....|.
gi 116734739 258 TGFLPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-203 |
6.88e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.22 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 38 LAIIPL---ISKSHHPRAVEAAIKYFLVQATASAILLFSSMANAWSSG--QWDITQL---TLPTPSIFLTTA-----IAM 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 105 KLGLVPFHFWFPEV-LQGTTMTTALLLSTVMKFPP-------ITILLLTSNSLNPTLmTTLAITSTAIGGWMGLNQTQIR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTygllrfgVGLFPEAWVYLAPWL-ATWAVVSVLYGASCAIAQKDMK 296
|
170 180
....*....|....*....|....*..
gi 116734739 177 KILAFSSITHLGWMTIIIIYNPKLSML 203
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSIL 323
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
8-277 |
8.72e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 8.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 8 ITYMTLALGTTMTISSNHWVM---AWVGLELNTLAIIPLISKSHHPRAVeaaikyFLVQATASAILLFSSMANAWS-SGQ 83
Cdd:PRK06459 76 SLYILTILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 84 WDITQLTLPTPSIFLTTAIAMKLGLVPFHF--WFPEVLQGTTMTTALLLSTVMK----FPPITILLLTSNSLNPTLMTTL 157
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFGLTI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 158 AIT---STAIGGWMGLNQTQIRKILAFSSITHLGWM-----TIIIIYNPKLSMLTFYLYVITT---------TTVFLTFN 220
Cdd:PRK06459 230 LAIgafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSG 309
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 116734739 221 STKAMTMTTLMTTWAKSPMLNATLMLvlLSLAGLPPLTGFLPKWLIIQELTKQAMAL 277
Cdd:PRK06459 310 LQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESLFMFAYVL 364
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
9.08e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 41.16 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 52 AVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQL-----------TLPtPSIFLTTAIAMKLGLV------PFHFW 114
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIadrlselvssgAVS-GWLALLLCILVFLGPMaksaqfPLHVW 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 115 FPEVLQGTTMTTALLLSTVMKFPPITIL--LLTSNSLNPTLMTTLAITSTA---IGGWMGLNQTQIRKILAFSSITHLGW 189
Cdd:PRK07376 250 LPDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGY 329
|
.
gi 116734739 190 M 190
Cdd:PRK07376 330 M 330
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-300 |
9.82e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.92 E-value: 9.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 21 ISSNHWVMAWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSS---MANAWSSGQWDI---------TQ 88
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIgflLSITGSLNMTDIaaylqehtnSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 89 LTLPTPSIFLTTAIaMKLGLVPFHFWFPEVLQGTT---------MTTALLLSTVMKFPPITILLLTSNSLNPTLMTTLAI 159
Cdd:PRK06591 212 IITIAIGFFLIGAI-LKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIAL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 160 TSTAIGGWMGLNQTQIRKILAFSSITHLGWMTIIIIYNPKLSMLTFYLYVITTTTVFLTFNSTkamtmttLMTTWAKSPm 239
Cdd:PRK06591 291 ATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFLIDA-------YNESYKREP- 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 116734739 240 LNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLSLLGLFFYLRLTYYS 300
Cdd:PRK06591 363 NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
2.60e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 39.71 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 55 AAIKYFLVQATASAILLFSSMANAWSSGQWDITQLTLPTPS-----IFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 130 LSTVM-KFPPITILLLTSNSLNP-----TLMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLG--------WMTIIII 195
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 196 YNPKLSMLTF-------YLYVITTTTVFLTFNS----TKAMTMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggalfhsLNHALFKSLLFLTAGSvvhaTGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*....
gi 116734739 265 LIIQELTkQAMALTATI--IAMLSLLGLF 291
Cdd:PRK08667 403 LLYESFF-QSFSVADPLikILLFSVLAIF 430
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.19e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 48 HHPRAVEAAIKYFLVQATASAILLFSSMANAWSSGQWDITQL--------TLPTPSIFLTTAIAMKLGLV------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselieNIKGHPLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 114 WFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSLNPT-----LMTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 189 WMTIIIIYNPK------LSMLTFYLYVITT--TTVFLTFN--STKAMTMTTLMTTWAKSPMLNATLMLVL--LSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLVAGivAHEAATRDIRKLGGLRKEMPITFIVASIaaLAMAGIPP 395
|
....*..
gi 116734739 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
70-316 |
4.45e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.90 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 70 LLFSSMANAWSSGqwDITQLTLPTpsIFLTTAIAMKLGLVPFHFWFPEVLQGTTMTTALLLSTVMKFPPITILLLTSNSL 149
Cdd:MTH00020 192 LDFSSVFNMVVSA--PSSDITLIC--LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 150 NPTLMTTLAIT-----STAIGGWMGLNQTQIRKILAFSSITHLGWMTIII-IYNPKLSMLTFYLYVITTTTVFLTFNSTK 223
Cdd:MTH00020 268 EQAPLALIIVTivgslTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 224 AMTM----TTLMTTWAKSPMLNATLMLV-LLSLAGLPPLTGFLPKWLIIQELTKQAMALTATIIAMLS-LLGLFFYLRLT 297
Cdd:MTH00020 348 HALSdeqdMRKMGGLISFLPLTYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLI 427
|
250
....*....|....*....
gi 116734739 298 YYSTITLPPNSTNYMKQWH 316
Cdd:MTH00020 428 YLTFLSNTNLKKAVFFHLH 446
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-289 |
6.27e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.26 E-value: 6.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 11 MTLALGTTMTISSNHWVMaWVGLELNTLAIIPLISKSHHPRAVEAAIKYFLVQATASAILLFSSMA---NAWSSGQWDIT 87
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 88 QLTLPTPSIFLTTAIAMKLG---LVPFHFWFPEVLQGTTMTTALLLSTVM----KFPPITILLLTSNSLNPT-------L 153
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGIAktaIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQrifaefnW 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116734739 154 MTTLAITSTAIGGWMGLNQTQIRKILAFSSITHLGW--MTIIIIYNPKLSMLTFYL--YVITTTTVFLTFNS----TKAM 225
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMGSiyslKKED 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 116734739 226 TMTTLMTTWAKSPMLNATLMLVLLSLAGLPPLTGFLPKWLIIQELTKQAMALTAtIIAMLSLLG 289
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLS-IIVMLVVIA 425
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-330 |
8.87e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 34.16 E-value: 8.87e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 116734739 291 FFYLRLTYYSTITLPPNSTNYMKQWHLTKP-TTTPIAILMA 330
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTkNTLLLPTLTT 41
|
|
| |
