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Conserved domains on  [gi|116668513|ref|YP_829497|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Apus apus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 6.74e-38

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 122.26  E-value: 6.74e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 6.74e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 122.26  E-value: 6.74e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 7.51e-11

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 53.72  E-value: 7.51e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  11 AFTLSSLGLAFHRtHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 116668513  91 HTLNMLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 2.66e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 36.58  E-value: 2.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFtLSSLGL--AFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAML 78
Cdd:COG0713   1 IPLEHYLILAAI-LFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                        90
                ....*....|....*...
gi 116668513 79 VASTRTHGSDHLHTLNML 96
Cdd:COG0713  80 VALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 6.74e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 122.26  E-value: 6.74e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.63e-36

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 118.91  E-value: 1.63e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 9.97e-36

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 117.01  E-value: 9.97e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.60e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 85.37  E-value: 2.60e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 116668513 81 STRTHGSDHLHTLNMLQC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 3.88e-17

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 69.59  E-value: 3.88e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  4 THLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTR 83
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|...
gi 116668513 84 THGSDHLHTLNML 96
Cdd:MTH00181 81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 3.76e-15

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 64.55  E-value: 3.76e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 116668513 81 STRTHGSDHLHTLNMLQ 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 7.51e-11

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 53.72  E-value: 7.51e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  11 AFTLSSLGLAFHRtHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 116668513  91 HTLNMLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 3.66e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 51.90  E-value: 3.66e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  6 LSFYSAFTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFtlMPILMLTFSACEAGTGLAMLVASTRTH 85
Cdd:MTH00188  7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELY--LSLVLLTFAACEASVGLALLVSLIRSH 84

                        90
                ....*....|...
gi 116668513 86 GSDHLHTLNMLQC 98
Cdd:MTH00188 85 GSDYVSSLNLIKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.56e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 45.02  E-value: 1.56e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513 12 FTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 116668513 92 TLNMLQ 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 12-98 8.16e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 43.30  E-value: 8.16e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513 12 FTLSSLGLAFHRTHLISPLLCLESMMLSMYI-ILSIWPAENQATTFTLMpilMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:MTH00149 13 FLMGVFALLFQYKHLLSILLSLEALMLSLLVmMFSSSGLISFSSYLFLI---ILTFGACEASLGLSLLVSLIRLHGNDYV 89


                ....*...
gi 116668513 91 HTLNMLQC 98
Cdd:MTH00149 90 SSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-98 1.74e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 42.43  E-value: 1.74e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513 12 FTLSSLGLAFHRTHLISPLLCLESMMLSMyIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00013 12 PFISMFNLSLQRKHLLMSLLSLEAMILSL-ALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLK 90


                ....*..
gi 116668513 92 TLNMLQC 98
Cdd:MTH00013 91 SLTSNKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-90 6.72e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 40.52  E-value: 6.72e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 116668513 12 FTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMpiLMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLL--FFLTFSVCEGALGLSILVSMIRSHGNDYF 87
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 8.03e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.82  E-value: 8.03e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513 12 FTLSSLGLAFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 116668513 92 TLNMLQ 97
Cdd:MTH00001 93 SLNSLR 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 2.66e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 36.58  E-value: 2.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513  1 MSFTHLSFYSAFtLSSLGL--AFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAML 78
Cdd:COG0713   1 IPLEHYLILAAI-LFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                        90
                ....*....|....*...
gi 116668513 79 VASTRTHGSDHLHTLNML 96
Cdd:COG0713  80 VALYRNRGTIDVDDLNEL 97
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 5.29e-04

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 35.92  E-value: 5.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116668513   1 MSFTHLSFYSA--FTLSSLGLaFHRTHLISPLLCLESMMLSMYIILSIWPAENQATTFTLMPILMLTFSACEAGTGLAML 78
Cdd:PRK05715   2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                         90
                 ....*....|....*...
gi 116668513  79 VASTRTHGSDHLHTLNML 96
Cdd:PRK05715  81 LQLYRNRGTIDVDDLNEL 98
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 61-98 2.26e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 35.32  E-value: 2.26e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 116668513  61 ILMLTFSACEAGTGLAMLVASTRTHGSDHLHTLNMLQC 98
Cdd:MTH00127 395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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