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Conserved domains on  [gi|1154824147|ref|WP_078737548|]
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glycosyltransferase [Porphyromonas circumdentaria]

Protein Classification

glycosyltransferase( domain architecture ID 1904539)

glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds; similar to Xanthomonas campestris glucuronosyltransferase GumK

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_4 super family cl48185
Glycosyltransferase Family 4;
29-193 7.19e-03

Glycosyltransferase Family 4;


The actual alignment was detected with superfamily member pfam13439:

Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 37.13  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147  29 LALKRIEVDIIlhCFEYDRPQAEQLNSICSEVYYYPrktgwkanLSTLPYNVYGRKAPKLLKRLLQDEYPILfeglHSCY 108
Cdd:pfam13439  14 LARRGHEVTVV--TPGGPGPLAEEVVRVVRVPRVPL--------PLPPRLLRSLAFLRRLRRLLRRERPDVV----HAHS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147 109 YLSHPLLRKRYKVFRACNI---EHHYYRAIGDAEKNPLKKIFYYTEALRFQHfeqtvQNADLLLAVSQTEAEYLQKTF-- 183
Cdd:pfam13439  80 PFPLGLAALAARLRLGIPLvvtYHGLFPDYKRLGARLSPLRRLLRRLERRLL-----RRADRVIAVSEAVADELRRLYgv 154

                         170
                  ....*....|
gi 1154824147 184 PNKQVQFIPC 193
Cdd:pfam13439 155 PPEKIRVIPN 164
 
Name Accession Description Interval E-value
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
29-193 7.19e-03

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 37.13  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147  29 LALKRIEVDIIlhCFEYDRPQAEQLNSICSEVYYYPrktgwkanLSTLPYNVYGRKAPKLLKRLLQDEYPILfeglHSCY 108
Cdd:pfam13439  14 LARRGHEVTVV--TPGGPGPLAEEVVRVVRVPRVPL--------PLPPRLLRSLAFLRRLRRLLRRERPDVV----HAHS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147 109 YLSHPLLRKRYKVFRACNI---EHHYYRAIGDAEKNPLKKIFYYTEALRFQHfeqtvQNADLLLAVSQTEAEYLQKTF-- 183
Cdd:pfam13439  80 PFPLGLAALAARLRLGIPLvvtYHGLFPDYKRLGARLSPLRRLLRRLERRLL-----RRADRVIAVSEAVADELRRLYgv 154

                         170
                  ....*....|
gi 1154824147 184 PNKQVQFIPC 193
Cdd:pfam13439 155 PPEKIRVIPN 164
 
Name Accession Description Interval E-value
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
29-193 7.19e-03

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 37.13  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147  29 LALKRIEVDIIlhCFEYDRPQAEQLNSICSEVYYYPrktgwkanLSTLPYNVYGRKAPKLLKRLLQDEYPILfeglHSCY 108
Cdd:pfam13439  14 LARRGHEVTVV--TPGGPGPLAEEVVRVVRVPRVPL--------PLPPRLLRSLAFLRRLRRLLRRERPDVV----HAHS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1154824147 109 YLSHPLLRKRYKVFRACNI---EHHYYRAIGDAEKNPLKKIFYYTEALRFQHfeqtvQNADLLLAVSQTEAEYLQKTF-- 183
Cdd:pfam13439  80 PFPLGLAALAARLRLGIPLvvtYHGLFPDYKRLGARLSPLRRLLRRLERRLL-----RRADRVIAVSEAVADELRRLYgv 154

                         170
                  ....*....|
gi 1154824147 184 PNKQVQFIPC 193
Cdd:pfam13439 155 PPEKIRVIPN 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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