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Conserved domains on  [gi|1151119848|gb|AQV09889|]
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NADH dehydrogenase subunit 4 (chloroplast) [Lupinus princei]

Protein Classification

NADH dehydrogenase subunit 4( domain architecture ID 11413988)

NADH dehydrogenase subunit 4 catalyzes the conversion from NAD(P)H and plastoquinone to NAD(P)(+) and plastoquinol

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ndhD CHL00011
NADH dehydrogenase subunit 4
7-504 0e+00

NADH dehydrogenase subunit 4


:

Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 964.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848   7 TNFFPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRF 86
Cdd:CHL00011    1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 GIDGLSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKR 166
Cdd:CHL00011   81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 167 LYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 246
Cdd:CHL00011  161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGI 326
Cdd:CHL00011  241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 327 GSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFII 406
Cdd:CHL00011  321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 407 FFGIITSQKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPD 486
Cdd:CHL00011  401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
                         490
                  ....*....|....*...
gi 1151119848 487 FILSFSVDKVEAILSNFL 504
Cdd:CHL00011  481 FVLSLSVDKVEAILSNYF 498
 
Name Accession Description Interval E-value
ndhD CHL00011
NADH dehydrogenase subunit 4
7-504 0e+00

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 964.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848   7 TNFFPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRF 86
Cdd:CHL00011    1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 GIDGLSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKR 166
Cdd:CHL00011   81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 167 LYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 246
Cdd:CHL00011  161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGI 326
Cdd:CHL00011  241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 327 GSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFII 406
Cdd:CHL00011  321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 407 FFGIITSQKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPD 486
Cdd:CHL00011  401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
                         490
                  ....*....|....*...
gi 1151119848 487 FILSFSVDKVEAILSNFL 504
Cdd:CHL00011  481 FVLSLSVDKVEAILSNYF 498
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
10-503 4.65e-172

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 493.83  E-value: 4.65e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  10 FPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLTENYKWIQFFDFYWRFGID 89
Cdd:COG1008     3 MPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  90 GLSIGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLY 168
Cdd:COG1008    82 GISLPLVLLTALLTPLAILASwNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILGIGLYSsNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAH 248
Cdd:COG1008   162 AAIKFFLYTLAGSLLMLVAILALYFLA-GALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 249 YSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGS 328
Cdd:COG1008   241 TAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 329 LSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFF 408
Cdd:COG1008   321 LNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 409 GIITSQkyllmtkILITFVTAIGMILTPIYSLSMLRQMFYGYklFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFI 488
Cdd:COG1008   401 GAFQVN-------PWLAILAALGLILTAAYLLWMYQRVFFGP--LKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
                         490
                  ....*....|....*
gi 1151119848 489 LSFSVDKVEAILSNF 503
Cdd:COG1008   472 LDLIEPSVEALLARV 486
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
13-503 3.13e-141

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 415.11  E-value: 3.13e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLTENYKWIQFFDFYWRFGIDGLS 92
Cdd:TIGR01972   1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLL-FQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 IGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT 171
Cdd:TIGR01972  80 LLLVLLTALLTLLAILASwESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 172 KFLLYTAGGSIFLLMGIlgIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 251
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAI--LGLYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 252 CMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 331
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 332 TGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGII 411
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 412 TsqkyllmTKILITFVTAIGMILTPIYSLSMLRQMFYGyKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFILSF 491
Cdd:TIGR01972 398 K-------VNPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
                         490
                  ....*....|..
gi 1151119848 492 SVDKVEAILSNF 503
Cdd:TIGR01972 470 TEPSVNNLLSQV 481
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
137-425 1.13e-45

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 161.33  E-value: 1.13e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 137 SRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT-KFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVGL 215
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGmKYFLLTLLGSSILLFGISLMYNYTG---TLSFDELSKALTGGLN 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 216 EIIFYIGFL---IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIeLLPRAHSIFSPWLMIIGSI 292
Cdd:pfam00361  78 SSGLLLLFLlilVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSL-LYLPSSPFIQQILLILAII 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 293 QIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAG-TGYDRLRLLYLDEMG 371
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYG 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1151119848 372 GMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILIT 425
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
 
Name Accession Description Interval E-value
ndhD CHL00011
NADH dehydrogenase subunit 4
7-504 0e+00

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 964.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848   7 TNFFPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRF 86
Cdd:CHL00011    1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 GIDGLSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKR 166
Cdd:CHL00011   81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 167 LYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 246
Cdd:CHL00011  161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGI 326
Cdd:CHL00011  241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 327 GSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFII 406
Cdd:CHL00011  321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 407 FFGIITSQKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPD 486
Cdd:CHL00011  401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
                         490
                  ....*....|....*...
gi 1151119848 487 FILSFSVDKVEAILSNFL 504
Cdd:CHL00011  481 FVLSLSVDKVEAILSNYF 498
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
10-485 0e+00

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 575.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  10 FPWLTIVVVLPIAGGSLIFLFPHRGN-KVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRFGI 88
Cdd:PRK02546    6 FPWLTTIILFPIVAALLIPFIPDKGDgKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWSVGA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  89 DGLSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLY 168
Cdd:PRK02546   86 DGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQY 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILGIGLYSSNePTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAH 248
Cdd:PRK02546  166 AATKFILYTAGSSLFILLAALAMAFYGDT-PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 249 YSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGS 328
Cdd:PRK02546  245 APVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGS 324
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 329 LSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFF 408
Cdd:PRK02546  325 FTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFV 404
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 409 GIITSQKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFYG---YKLfnTPNSYFFDSGPRELFISISILIPVIGIGIYP 485
Cdd:PRK02546  405 GFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGpenKEL--VSHEKLVDAEPREVFIIACLLVPIIGIGLYP 482
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
35-485 0e+00

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 568.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  35 NKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRFGIDGLSIGPILLTGFITTLATLAAHPVT 114
Cdd:PRK12561    4 GKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 115 RESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILGIGLY 194
Cdd:PRK12561   84 RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALS 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 195 SSNePTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIEL 274
Cdd:PRK12561  164 GDT-FTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQM 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 275 LPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFL 354
Cdd:PRK12561  243 LPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFL 322
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 355 AGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGMIL 434
Cdd:PRK12561  323 TGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGLIL 402
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1151119848 435 TPIYSLSMLRQMFYGYKLFNTP-NSYFFDSGPRELFISISILIPVIGIGIYP 485
Cdd:PRK12561  403 TPIYLLSMLRRVFYGPRSELLPaLAVVEDAKPRELFIALSLLVPIIGIGFYP 454
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
10-503 4.65e-172

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 493.83  E-value: 4.65e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  10 FPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLTENYKWIQFFDFYWRFGID 89
Cdd:COG1008     3 MPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLL-AGFDPGTGGFQFVESYPWIPSLGISYHLGVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  90 GLSIGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLY 168
Cdd:COG1008    82 GISLPLVLLTALLTPLAILASwNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILGIGLYSsNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAH 248
Cdd:COG1008   162 AAIKFFLYTLAGSLLMLVAILALYFLA-GALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 249 YSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGS 328
Cdd:COG1008   241 TAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 329 LSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFF 408
Cdd:COG1008   321 LNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 409 GIITSQkyllmtkILITFVTAIGMILTPIYSLSMLRQMFYGYklFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFI 488
Cdd:COG1008   401 GAFQVN-------PWLAILAALGLILTAAYLLWMYQRVFFGP--LKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
                         490
                  ....*....|....*
gi 1151119848 489 LSFSVDKVEAILSNF 503
Cdd:COG1008   472 LDLIEPSVEALLARV 486
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
10-503 4.93e-142

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 417.68  E-value: 4.93e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  10 FPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCyHFKLDDPLIQLTENYKWIQFFDFYWRFGID 89
Cdd:PRK05846    3 WPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWI-GFDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  90 GLSIGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLY 168
Cdd:PRK05846   82 GISLLLVVLTALLTPLAVLASwEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILGIGLYSSNEP-TLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEA 247
Cdd:PRK05846  162 AATKFFLYTLLGSLLMLVAIIYLVVVYYNATgTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQA 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 248 HYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIG 327
Cdd:PRK05846  242 PTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIF 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 328 SLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIF 407
Cdd:PRK05846  322 AGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 408 FGIITsqkyllmTKILITFVTAIGMILTPIYSLSMLRQMFYGYKlfNTPNSYFFDSGPRELFISISILIPVIGIGIYPDF 487
Cdd:PRK05846  402 LGSFQ-------VNPVIAFIATTGLILAAVYSLWLYQRVMFGPV--KNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
                         490
                  ....*....|....*.
gi 1151119848 488 ILSFSVDKVEAILSNF 503
Cdd:PRK05846  473 LLDVIHPSVENLLQWV 488
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
13-503 3.13e-141

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 415.11  E-value: 3.13e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLTENYKWIQFFDFYWRFGIDGLS 92
Cdd:TIGR01972   1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLL-FQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 IGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT 171
Cdd:TIGR01972  80 LLLVLLTALLTLLAILASwESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 172 KFLLYTAGGSIFLLMGIlgIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 251
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAI--LGLYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 252 CMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 331
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 332 TGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGII 411
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 412 TsqkyllmTKILITFVTAIGMILTPIYSLSMLRQMFYGyKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFILSF 491
Cdd:TIGR01972 398 K-------VNPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
                         490
                  ....*....|..
gi 1151119848 492 SVDKVEAILSNF 503
Cdd:TIGR01972 470 TEPSVNNLLSQV 481
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
13-481 5.89e-93

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 291.60  E-value: 5.89e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWRFGIDGLS 92
Cdd:PRK06473    2 LSALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGLS 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 IGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATK 172
Cdd:PRK06473   82 LPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATK 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 173 FLLYTAGGSIFLLMGILGIGlYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTC 252
Cdd:PRK06473  162 FLLYTAISGILILVSFLGLV-WLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 253 MLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDT 332
Cdd:PRK06473  241 VLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPL 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 333 GLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIP---MPKIFTIFSIFSMASLALPGMSGFVAEFIIF-- 407
Cdd:PRK06473  321 SILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEFLVFrg 400
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1151119848 408 -FGIITSQKYLLMtkilitfvtaIGMILTPIYSLSMLRQMFYGY---KLFNTPNSYFFDSGPRelfISISILIPVIGI 481
Cdd:PRK06473  401 sFPIFPVQTLLCM----------IGTGLTAVYFLLLVNRVFFGRltaELSNLPRVLWSERLPA---LVLAVLIVVLGI 465
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
13-409 9.64e-82

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 262.73  E-value: 9.64e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHR-GNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLTENYKWIQFFDFYWRFGIDGL 91
Cdd:PRK07363    2 LSVLLWLPILGAIIIGFFPGNlPSARLRQITLVFAVLVLAWSLFLL-TQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  92 SIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT 171
Cdd:PRK07363   81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 172 KFLLYTAGGSIFLLMGILGIGLYSSNePTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 251
Cdd:PRK07363  161 KFLIYTAVSGLLVLAAFLGIVWLSGS-TSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 252 CMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 331
Cdd:PRK07363  240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 332 TGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIP---MPKIFTIFSIFSMASLALPGMSGFVAEFIIFF 408
Cdd:PRK07363  320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399

                  .
gi 1151119848 409 G 409
Cdd:PRK07363  400 G 400
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
12-433 1.11e-67

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 223.49  E-value: 1.11e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  12 WLTIVVVLPIAGGSLIFLFPHRGnKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTEnykWIQFFDFYwrFGIDGL 91
Cdd:COG0651     4 LLILPVLLPLLAAALLLLLGRRR-RLQRALSLLASLALLALALALLLQVLAGGPLVYALGG---WPAPFGIV--LVADRL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  92 SIGPILLTGFITTLATLAA---HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLY 168
Cdd:COG0651    78 SALFLLLTALVALAVLLYSigyMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALR 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNR--SYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 246
Cdd:COG0651   158 AGLKYLILNLVGSALFLLGVGLLYGATG---TLNMADLAARlaELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVRINIELLP-RAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIG 325
Cdd:COG0651   235 APSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 326 IGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFI 405
Cdd:COG0651   315 LGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWL 394
                         410       420
                  ....*....|....*....|....*....
gi 1151119848 406 IFFGIITSQKYLLMTKILIT-FVTAIGMI 433
Cdd:COG0651   395 LLQAALEAGAWLLAAVLLLSsLLTLAYFV 423
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
86-489 4.52e-61

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 207.99  E-value: 4.52e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK 164
Cdd:MTH00204   79 FAVDGVSLFFILLTTLLIPICILISwKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSR 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 K-RLYSATKFLLYTAGGSIFLLMGILGIglySSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDT 243
Cdd:MTH00204  159 EeKVRASYYFFFYTFAGSVFMLLGIFQL---YSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQA 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 244 HGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFII 323
Cdd:MTH00204  236 HVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 324 IGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAE 403
Cdd:MTH00204  316 LGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE 395
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 404 fiiFFGIITSQKYLLMTKILITFvtaiGMILTPIYSLSMLRQMFYG----YKLFNTpnsyffDSGPRELFISISILIPVI 479
Cdd:MTH00204  396 ---FFSLLAAFEYSLGLGVLVTS----GMVWSAAYSLYLYNRISFGggsnYLLFSR------DLNRRELLAILPLIIAIF 462
                         410
                  ....*....|
gi 1151119848 480 GIGIYPDFIL 489
Cdd:MTH00204  463 LLGIVPFIII 472
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
13-490 2.04e-56

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 195.27  E-value: 2.04e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHrgNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFFDFYWR---FGID 89
Cdd:MTH00217    2 LELVFILPLIGILHLLIIPR--DNIVRLKKIALEWSLLTLTATILLWASFDGEGQFQAIKKFEWIPGIEPVFGpvvFAVD 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  90 GLSIGPILLTGFITTLATLaahpVTRES-----RLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK 164
Cdd:MTH00217   80 GISIFFLILTALLTPICIL----ISWNSikfliKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSR 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 K-RLYSATKFLLYTAGGSIFLLMGIlgIGLYSsNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDT 243
Cdd:MTH00217  156 EeKVQASYYFFFYTFIGSVFMLLGI--FTLYS-YAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 244 HGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFII 323
Cdd:MTH00217  233 HVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 324 IGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAE 403
Cdd:MTH00217  313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 404 FIIFFGiitsqkyLLMTKILITFVTAIGMILTPIYSLSMlrqmfYGYKLFNTPNSYFF---DSGPRELFISISILIPVIG 480
Cdd:MTH00217  393 FLSLLA-------AFEYSYIVGVLASLGMVLSAGYSIYL-----YNRVCFGAPSKYLYfsrDLNRREFYVLLPLVFLIYL 460
                         490
                  ....*....|
gi 1151119848 481 IGIYPDFILS 490
Cdd:MTH00217  461 MGIFPFIIID 470
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
86-489 9.29e-51

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 180.89  E-value: 9.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATLAA-HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK 164
Cdd:MTH00226   98 FAVDGISIYFIILTGFIVPCSILISwHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 K-RLYSATKFLLYTAGGSIFLLMGILGigLYSSNEPTLNFQMLTNRSYPVG-LEIIFYIGFLIAFAVKSPIIPFHTWLPD 242
Cdd:MTH00226  178 EeKMQAAYYFFFYTLIGSVLMLLCLFS--LYNIHGTTDYLTLASCSHVVSEqTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 243 THGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFI 322
Cdd:MTH00226  256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 323 IIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVA 402
Cdd:MTH00226  336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 403 EFIiffGIITSQKYllmtKILITFVTAIGMILTPIYSLSMLRQMFYGYKlfNTPNSYFFDSGPRELFISISILIPVIGIG 482
Cdd:MTH00226  416 EYL---SILSSFNW----NPIIGVFVCSGVILSAVYSFYFANRVTFGAP--GNLITFARDVNRREFYITASMVFFAFLIG 486

                  ....*..
gi 1151119848 483 IYPDFIL 489
Cdd:MTH00226  487 IYPIFIL 493
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
86-492 2.20e-50

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 179.30  E-value: 2.20e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATLAAHPVTRE-SRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK 164
Cdd:PRK08375   73 LRADSLSALFLLVTSILAIAALLYAIGYGEHrQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 KRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSNEPTLNFQMLTNRSYPVG-LEIIFYIgFLIAFAVKSPIIPFHTWLPDT 243
Cdd:PRK08375  153 RALAAARKYLIVGLIGSTFLL---IGVGLLYGVTGTLNMADLAGALAENPtVVTAFGF-VLLALALKAAVFPLHTWLPRA 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 244 HGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPW---LMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMG 320
Cdd:PRK08375  229 YPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 321 FIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGF 400
Cdd:PRK08375  309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 401 VAEFIIFFGIITSQKYLLMTKILI-TFVTAigmiltpiysLSMLRqmFYGYKLFNTPNSYffdSGPRELFISISILIPV- 478
Cdd:PRK08375  389 VSKWYLVVGAVEAGQWLVLAVLLAsSLLAL----------LYFLR--IWYRAFFGPPPPG---SEAPKQEAPLGMLAPSl 453
                         410       420
                  ....*....|....*....|
gi 1151119848 479 ------IGIGIYPDFILSFS 492
Cdd:PRK08375  454 alallsLLLGIYAGPLLQLA 473
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
86-488 3.04e-50

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 177.82  E-value: 3.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLT------GFITTLATLAAHPVTReSRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLS 159
Cdd:MTH00206   55 LSYDPLSSPLVILScwllplMFLASQNHMKNEPINR-QRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLIT 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 160 MWGGKK-RLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYpvgLEIIFYIGFLIAFAVKSPIIPFHT 238
Cdd:MTH00206  134 RWGNQKeRLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHL 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 239 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSH 318
Cdd:MTH00206  211 WLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF-FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 319 MGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMS 398
Cdd:MTH00206  290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 399 GFVAEFIIFFGIITSQKYLLmtkilitFVTAIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFfdSGPRELFISISILIPV 478
Cdd:MTH00206  370 NLFGELLIITSLFSWSNFTL-------PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSP--SSTREHLLLFLHLFPV 440
                         410
                  ....*....|
gi 1151119848 479 IGIGIYPDFI 488
Cdd:MTH00206  441 ILLILNPNLI 450
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
137-425 1.13e-45

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 161.33  E-value: 1.13e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 137 SRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT-KFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVGL 215
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGmKYFLLTLLGSSILLFGISLMYNYTG---TLSFDELSKALTGGLN 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 216 EIIFYIGFL---IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIeLLPRAHSIFSPWLMIIGSI 292
Cdd:pfam00361  78 SSGLLLLFLlilVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSL-LYLPSSPFIQQILLILAII 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 293 QIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAG-TGYDRLRLLYLDEMG 371
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYG 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1151119848 372 GMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILIT 425
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
84-489 6.44e-45

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 163.61  E-value: 6.44e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  84 WRFGIDGLSIGPILLTGFITTLATLAAHPV-----TRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLL 158
Cdd:MTH00044   55 LSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 159 SMWGGKKRLYSA-TKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFH 237
Cdd:MTH00044  135 TRWGAQKERIQAgLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFH 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 238 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINiellprahSIFS-PWLMIIGSIQIIY----AALTS---LGQRNLKK 309
Cdd:MTH00044  215 LWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLI--------NLFSlPSANNISFILIVFccwgALITSiicLRQTDLKA 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 310 RIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSM 389
Cdd:MTH00044  287 LIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCA 366
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 390 ASLALPGMSGFVAEFIIFFGIITsqkyllmTKILITFVTAIGMILTPIYSLSMLrQMFYGYKLFNTpNSYFFDSGPRELF 469
Cdd:MTH00044  367 ANLGLPPLPNLIGELLIISSIIS-------WSILSFPIIGLATVFGAIYSLLIY-QLTNSGSFPSW-ISNVSPISSREHL 437
                         410       420
                  ....*....|....*....|
gi 1151119848 470 ISISILIPVIGIGIYPDFIL 489
Cdd:MTH00044  438 LIFLHLLPLILIIINPNIIL 457
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
86-492 3.88e-44

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 160.78  E-value: 3.88e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATLAAHPVTRESR---LFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWG 162
Cdd:MTH00150   20 FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNkssSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 163 GK-KRLYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLP 241
Cdd:MTH00150  100 YQpERLQAGMYMMLYTVGASLPLLLVILWMSSSYG---SSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLP 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 242 DTHGEAHYSTCMLLAGILLKMGAYGLVRINIeLLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGF 321
Cdd:MTH00150  177 KAHVEAPVAGSMILAGILLKLGGYGILRMMM-VFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 322 IIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRL--RLLYLdeMGGMAIPMPKIFTIFSIFSMASLALPGMSG 399
Cdd:MTH00150  256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVhsRSLFL--SKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 400 FVAEFIIFFGIITSQKYLLMTKILITFVTAigmiltpIYSLSMLRQMFYG-YKLFNTPnsyFFDSGPRELFISISILIPV 478
Cdd:MTH00150  334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSG-------LYSLYLYTSIQHGgSSSFLKP---FNELKSSEMLLLLLHWVPL 403
                         410
                  ....*....|....
gi 1151119848 479 IGIGIYPDFILSFS 492
Cdd:MTH00150  404 LLLILKSDLLFMWI 417
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
101-443 8.87e-44

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 160.75  E-value: 8.87e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 101 FITTLATLAAhpvtresrlfhFLMLAmysgqigpFSSRDILLFFIMWELELIPVYLLLSMWGG-KKRLYSATKFLLYTAG 179
Cdd:MTH00124   95 FLTTLILLQT-----------FLILA--------FSATELTLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLI 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 180 GSIFLLMGILGIGlYSSNEPTLNFQMLTNRSYPVGL-EIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGI 258
Cdd:MTH00124  156 SSLPLLIAILYLH-NQTGTLSLPMLQLTHPTLTNSWtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 259 LLKMGAYGLVRINIELLPRAHSIFSPwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAI 338
Cdd:MTH00124  235 LLKLGGYGIIRITLLLPPLSNTLHYP-FLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAM 313
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 339 LQIISHGFIGAALFFLAGTGYDRL--RLLYLdeMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIffgIITSQKY 416
Cdd:MTH00124  314 ILMIAHGLTSSMLFCLANTNYERThsRTLLL--TRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTI---MTSLFNW 388
                         330       340
                  ....*....|....*....|....*..
gi 1151119848 417 LLMTKILitfvTAIGMILTPIYSLSML 443
Cdd:MTH00124  389 SPTTIIL----TGLATLITASYTLYMF 411
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
87-443 2.46e-42

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 156.65  E-value: 2.46e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 GIDGLSIGPILLTGFITTLATLAAH------PVTREsRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSM 160
Cdd:MTH00127   58 ATDPLSTPLLVLTCWLLPLMILASQnhtapePINRQ-RMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITR 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 161 WGGKK-RLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTW 239
Cdd:MTH00127  137 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLW 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 240 LPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWlMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHM 319
Cdd:MTH00127  217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 320 GFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSG 399
Cdd:MTH00127  296 GLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPN 375
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1151119848 400 FVAEFIiffgIITSQKYLLMTKILItfvTAIGMILTPIYSLSML 443
Cdd:MTH00127  376 LMGELM----IITSLFNWSPWTLAL---TGLGTLITAGYSLYMF 412
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
86-443 4.39e-42

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 155.84  E-value: 4.39e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATLAA------HPVTREsRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLS 159
Cdd:MTH00068   56 FGIDQISSPLLILTCWLLPLMILASqnhlknEPINRQ-RTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 160 MWGGKK-RLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHT 238
Cdd:MTH00068  135 RWGNQEeRLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHL 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 239 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSH 318
Cdd:MTH00068  215 WLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYP-FIILALWGVLMTSLICLRQTDLKSLIAYSSVSH 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 319 MGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRL--RLLYLdeMGGMAIPMPKIFTIFSIFSMASLALPG 396
Cdd:MTH00068  294 MGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERThsRTLLL--LRGAQTILPLMATWWLLSNLSNMALPP 371
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1151119848 397 MSGFVAEFIIFFGIITSQKYLLMtkilitfVTAIGMILTPIYSLSML 443
Cdd:MTH00068  372 SPNLWGELTIMVSLFNWSNWTIL-------ITGLGTLITAAYTLYMF 411
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
79-489 1.07e-41

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 154.54  E-value: 1.07e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  79 FFDFYWRFGIDGLSIGPILLTGFITTLATLAAHPVTR---ESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVY 155
Cdd:MTH00163   45 FSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKknnYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 156 LLLSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILgigLYSSNEPTLNFQMLTNRSYpvgLEIIFYIGFLIAFAVKSPII 234
Cdd:MTH00163  125 FLILGWGYQpERLQAGIYLLFYTLFASLPLLVGIF---YLYNNSGSLSFFLLNFFGS---LNFLWYLSMILAFLVKMPMF 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 235 PFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIeLLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYS 314
Cdd:MTH00163  199 FVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMS-FFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYS 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 315 SVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRL--RLLYLDEmgGMAIPMPKIFTIFSIFSMASL 392
Cdd:MTH00163  278 SVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLgsRSLLINK--GLLNFMPSMSLWWFLLSSSNM 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 393 ALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAigmiltpIYSLSMLRQMFYGykLFNTPNSYFFDSGPRELFISI 472
Cdd:MTH00163  356 AAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSA-------AYSLYLYSYSQHG--KYYSGLYSCSSGKVREYLLLF 426
                         410
                  ....*....|....*..
gi 1151119848 473 SILIPVIGIGIYPDFIL 489
Cdd:MTH00163  427 LHWLPLNLLILKSDLFM 443
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
89-491 2.25e-37

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 142.96  E-value: 2.25e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  89 DGLSIGPILLTGFITTLATLAAHPV---TRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK- 164
Cdd:MTH00014   58 DMLSAPLITLTLWITALMILASFKIfqnNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQp 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 KRLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGfliAFAVKSPIIPFHTWLPDTH 244
Cdd:MTH00014  138 ERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITIL---AFMVKMPLYTVHLWLPKAH 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 245 GEAHYSTCMLLAGILLKMGAYGLVRINiELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIII 324
Cdd:MTH00014  215 VEAPVAGSMILAGILLKLGGYGLLRMS-SLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTA 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 325 GIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYD--RLRLLYLdeMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVA 402
Cdd:MTH00014  294 GIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYEttHTRSLFL--TKGLLSLFPTMTMWWFLLSAANMAAPPSINLLS 371
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 403 EFIIFFGIITSQKYLLMTKILITFVTAigmiltpIYSLSMLRQMFYG-YKLFNTPNSYFfdsGPRELFISISILIPVIGI 481
Cdd:MTH00014  372 EIMLLTSILSSSLSTAILLAITSFLAA-------AYSLFLYTSTQHGsPPSFMNPLNLF---TPRNHTLMTLHLVPLFIL 441
                         410
                  ....*....|
gi 1151119848 482 GIYPDFILSF 491
Cdd:MTH00014  442 ILKPDLITNW 451
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
10-430 1.69e-36

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 141.65  E-value: 1.69e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  10 FPWLTIVVVLPIAGG---SLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLtenykwiqFFDFYWRF 86
Cdd:PRK12667    3 MDIVGLTPILLVLFAfllPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYL--------FGGWPAPI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 GI----DGLSIGPILLTGFITTLATLAAHPVTRESRL---FHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLS 159
Cdd:PRK12667   75 GIvyevDLLGALLGLLTALVMFLILIYSYWYLEHESGpewYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVA 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 160 MWGGKKR-LYSATKFLLYTAGGSIfllMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEI-------------IFYIGFLI 225
Cdd:PRK12667  155 YYRDRGDaVEAAIKYALIGAVGTT---LYFLALAFLYATFGTLNMADLSAKIRGLSFPLtgglagnpplalgVALALALW 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 226 AFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRI------NIELLPRAHSIFSPWLMIIGSIQIIYAAL 299
Cdd:PRK12667  232 AFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGAL 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 300 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPK 379
Cdd:PRK12667  312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1151119848 380 IFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAI 430
Cdd:PRK12667  392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISL 442
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
74-430 1.98e-35

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 137.42  E-value: 1.98e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  74 YKWIQFFdfywrFGIDGLSIGPILLTGFITTLATLAAHPV---TRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELE 150
Cdd:MTH00205   46 TSFISSS-----FSFDSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEAS 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 151 LIPVYLLLSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILGIglySSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAV 229
Cdd:MTH00205  121 LIPTLILILGWGYQpERLQASMYMMMYTLCASLPLLIGLFFL---NSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLV 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 230 KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKK 309
Cdd:MTH00205  198 KLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI-TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKS 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 310 RIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSM 389
Cdd:MTH00205  277 LIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLIS 356
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1151119848 390 ASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAI 430
Cdd:MTH00205  357 CNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGA 397
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
135-491 6.68e-34

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 133.09  E-value: 6.68e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 135 FSSRDILLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILGIglySSNEPTLNFQMLTNRSYPV 213
Cdd:MTH00110  110 FTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALLYI---QNNLGSLNFLLLQLWAQPL 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 214 GLE---IIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHS------IFSP 284
Cdd:MTH00110  187 PNSwsnNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFmaypflMLSL 266
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 285 WLMIIGSiqiiyaaLTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRL-- 362
Cdd:MTH00110  267 WGMIMTS-------SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhs 339
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 363 RLLYLDEmgGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIffgIITSQKYLLMTKILitfvTAIGMILTPIYSLSM 442
Cdd:MTH00110  340 RTMILAR--GLQTLLPLMATWWLLASLTNLALPPTINLIGELFV---IMSSFSWSNITIIL----MGLNMLITALYSLYM 410
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1151119848 443 LRQMFYGYKLFNTPNSYffDSGPRELFISISILIPVIGIGIYPDFILSF 491
Cdd:MTH00110  411 LITTQRGKLTHHINNIK--PSFTRENTLMALHLLPLLLLSLNPKIILGP 457
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
13-491 1.19e-33

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 134.35  E-value: 1.19e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFphrgnKVIRWytICICLVDLLLTTYAFCYHFKLDdplIQLTENYkWIQFFDFYWRFGIDGLS 92
Cdd:PRK08668    3 LTLLLLTPLIGSVLAYLL-----KKINE--KIGVIGNALPLLFLIKLYFTLK---VGTGEKL-TLFFGGFKLTFTLTHLS 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 ---IGPILLTGFITTLATLAAHpvTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYS 169
Cdd:PRK08668   72 wffAMISLLVIFSVAFFMVSEK--TKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKAS 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 170 ATKFLLYTAGGSIFLLmgilGIGLYSSNEPTLNFQMLTN--RSYPVGLEIIFYIGFLIAFAV-KSPIIPFHTWLPDTHGE 246
Cdd:PRK08668  150 LKYFVLSAIGAYAMLY----AIFLIYAKTGTFDFADISQglINDTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSE 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVrINIELLP-----------RAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSS 315
Cdd:PRK08668  226 APQSFSAVLSGQLSKLGAYGFL-LVLYVLPgtklfsefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSS 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 316 VSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTI--FSIFSMAslA 393
Cdd:PRK08668  305 VANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMylVAIISLA--G 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 394 LPGMSGFVAEFIIFFGIITSQKYLLmtkiliTFVTAIGMILTPIYSLSMLRQMFYGYKlfnTPNSYFFDSGPRELFISIS 473
Cdd:PRK08668  383 IPPMSGFASKWLIFEALISKGMPIT------AFMAFFGSIGSFLYVFRPLAGVFLGQL---PSDHKDVKEAPLPMLIPMA 453
                         490
                  ....*....|....*....
gi 1151119848 474 IL-IPVIGIGIYPDFILSF 491
Cdd:PRK08668  454 ILvLLNVVFGVAPGLVLQE 472
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
12-449 2.47e-31

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 127.58  E-value: 2.47e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  12 WLTIVVVLPIAGGSLIFLFPHR-GNKVIRWYTICICLVDLLLTTYAFcYHFKLDDPLIQLtenYKWIQF--FDFYWRFGI 88
Cdd:COG1009     3 LLWLIPLLPLLGALLAGLLGRRlGRRAAGWLAALAPLAAFVLSLLLF-PAVLGGEVVVEL---YTWIPVgsLGLDFGFRL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  89 DGLSIGPILLTGFITTLATLAA----HPVTRESRLFHFLML---AMysgqIGPFSSRDILLFFIMWELELIPVYLLLSMW 161
Cdd:COG1009    79 DGLSLLMLLLVTGVGLLVHIYSigymSGDPGLARFFAYLLLfmaAM----LGLVLSDNLLLLFVFWELVGLCSYLLIGFW 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 162 GGKKR-LYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQ-MLTNRSYPVGLEIIFYIGFLIAFAV--KSPIIPFH 237
Cdd:COG1009   155 YEKPSaRRAARKAFLVTRVGDLGLLLGILLLGAIAG---TLNFSeLLAAAPTILSSPLLTLILLLLLLGAfgKSAQFPLH 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 238 TWLPDTHgEA--------HYSTcMLLAGILLkmgaygLVRIN--IELLPRAHSIfspwLMIIGSIQIIYAALTSLGQRNL 307
Cdd:COG1009   232 FWLPDAM-EGptpvsallHAAT-MVKAGVYL------LARLSplFALSPVWLTV----VAIIGAITALFAALIALAQTDI 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 308 KKRIAYSSVSHMGFIIIGIGSlsdTGLNGAILQIISHGFIGAALFFLAG-----TGYDRLRllyldEMGGMAIPMPKIFT 382
Cdd:COG1009   300 KRVLAYSTVSQLGYMFLALGV---GAYVAALFHLLTHAFFKALLFLGAGsvihaTGTRDIR-----KMGGLRKKMPITAI 371
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1151119848 383 IFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYllmtKILITFVTAIGMILTPIYSLSMLRQMFYG 449
Cdd:COG1009   372 TFLIGALSLAGIPPFAGFFSKEAILEAALEAGGL----GPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
12-500 1.14e-29

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 121.60  E-value: 1.14e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  12 WLTIV-VVLPIAGGSLIFLFPHRgNKVIRWYTICiCLVDLLLTTYAFCYHFKLDDPLIqltenykwIQFFDFYWRFGI-- 88
Cdd:PRK12663    4 NLLILpMLLPLLCGLVLVFLRNR-DRLQRYLAIG-TLTILTLISLALLIYVQRHGPIT--------LDFGGWLPPFGIqf 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  89 --DGLSIGPILLTGFITTLA---TLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGG 163
Cdd:PRK12663   74 tgDSLSALMVTTASFVATAImayGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 164 KKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSNEPTLNFQMLTNRSYPVGLE---IIFYIGFLIAFAVKSPIIPFHtWL 240
Cdd:PRK12663  154 REQLRGAIKYVVLNLIGSWLFL---LGIGLLYGTFGTLNMAHIAMRLNDMGDTatlTTIALLFLLAFGMKAALFPFM-WL 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 241 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMG 320
Cdd:PRK12663  230 PAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIG 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 321 FIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGF 400
Cdd:PRK12663  310 FILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGF 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 401 VAEFIIFFGIITSQKYLLMTKILITfvtaiGMILTpiysLSMLRQMFYGYKLFNTPNSYFFDSGPRELFISISILI-PVI 479
Cdd:PRK12663  390 WGKVLLVQGALDNGAYILLALMLIT-----SLITM----YSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAvVVI 460
                         490       500
                  ....*....|....*....|.
gi 1151119848 480 GIGIYPDFILSFSVDKVEAIL 500
Cdd:PRK12663  461 AMGIAAEPLLNLTQDAAEGLL 481
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
12-491 3.29e-29

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 119.84  E-value: 3.29e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  12 WLTIVVVLPIAGGSLIFLF-----PHRGNKVIRWYTICICLVDLLLTTYAFCYHFKlddpliqltenykwIQFFDFYWrf 86
Cdd:COG1007     4 LLALLPEIILLLGALVLLLldlflPRRSRRLLAGLALLGLLLALALLLLALGGGTG--------------TAFGGMFV-- 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  87 gIDGLSIGPILLTGFITTLATLAAHPVTRESRLFHF----LMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWG 162
Cdd:COG1007    68 -VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGefyaLLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRR 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 163 GKKR-LYSATKFLLYTAGGSIFLLMGI-LGIGLYSSneptLNFQMLTNR-SYPVGLEIIFYIGF---LIAFAVKSPIIPF 236
Cdd:COG1007   147 DDRRsSEAALKYFLLGALSSGFLLYGIsLLYGATGS----LNLAGIAAAlAAGGANSPLLLLGLvlvLAGLAFKLSAVPF 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 237 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSV 316
Cdd:COG1007   223 HMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 317 SHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALF-FLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFsMASLA-L 394
Cdd:COG1007   303 AHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF-LLSLAgI 381
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 395 PGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGmiltpiYSLSMLRQMFygyklFNTPNSYFFDSGPRELFISISI 474
Cdd:COG1007   382 PPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY------YYLRVVKAMY-----FDEPEEEAPISAPPGLRVALVI 450
                         490
                  ....*....|....*...
gi 1151119848 475 L-IPVIGIGIYPDFILSF 491
Cdd:COG1007   451 AaLLVLLLGIFPGPLLDL 468
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
86-490 2.34e-27

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 115.19  E-value: 2.34e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGIDGLSIGPILLTGFITTLATL-AAHPVTRESRL--FHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWg 162
Cdd:PRK08376   86 WEVDLFGAFMALIATIVSFLAVLySISYMKHDTGLdkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR- 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 163 gKKRLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNR--SYPVGLEIIFYIGFLIAFAVKSPIIPFHTWL 240
Cdd:PRK08376  165 -NDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKmsENPTVVAKIALALFIAGLAMKSGAVPVHMWL 243
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 241 PDTHGEAHYS-TCMLLagILLKMGAYGLVRINIELL-PRAHSIFSPWLMII-GSIQIIYAALTSLGQRNLKKRIAYSSVS 317
Cdd:PRK08376  244 PDAYPAAPSSiSAMLL--VIKQAGLYALARVLFSIYgPAINLATVGWVIIIlGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 318 HMGFIIIGIG------------SLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFS 385
Cdd:PRK08376  322 QIGYMLLGLGvglaalgdpamaSYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFL 401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 386 IFSMASLALPGMSGFVAEFIIFfgiitsqKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFYGYKLfntPNSYFFDSGP 465
Cdd:PRK08376  402 IGAAAIVGLPPFNGFASKWLIY-------ESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPS---EKVMNVKEPP 471
                         410       420
                  ....*....|....*....|....*.
gi 1151119848 466 RELFISISIL-IPVIGIGIYPDFILS 490
Cdd:PRK08376  472 KPMLVPMLILaIAIIGMGLFPWQISD 497
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
79-429 7.75e-26

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 110.23  E-value: 7.75e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  79 FFDFYWRFGIDGLSIGPILLTGFITTLATLAAHPVT-----------RESRLFHFLMLAMYSGQIGPFSSRDILLFFIMW 147
Cdd:PRK08676   52 YFMESRYLFIDHLGIFVVLIASVVFILAALYARGYVdhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFA 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 148 ELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGIlgIGLYS-----SNEPTLNFQMLTNRS--YPVGLEIIFY 220
Cdd:PRK08676  132 ELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGL--IFLFSltrqaLGTGTLNWTELAAHAslLSPSVLGASF 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 221 IGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELL-PRAHSIFSPWLMIIGSIQIIYAAL 299
Cdd:PRK08676  210 LFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqSGAAEQFSNVLIGLGIFSIAVAAF 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 300 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPK 379
Cdd:PRK08676  290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPV 369
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1151119848 380 IFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTA 429
Cdd:PRK08676  370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAA 419
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
88-418 9.40e-26

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 110.04  E-value: 9.40e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  88 IDGLSIGPILLTGFITtLATLAAHPVTRESRLFHFLmLAMYSGQIG-PFSSRDILLFFIMWELELIPVYLLLSMWGGKKR 166
Cdd:PRK07234   65 ADALSGYFILTNALVT-LAVIFYCWESAKTRFFYAQ-LLILHGSVNaAFVCADLISLYVALEVLSIATFLLVAYPRTDRA 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 167 LYSATKFLLYTAGGSIFLLMGIlgIGLYSSNEpTLNFQMLTNRSyPVGLEIIFyIGFLiafaVKSPIIPFHTWLPDTHGE 246
Cdd:PRK07234  143 IWVGLRYLFYSNVAMLFYLIGA--VLVYQANG-TFAFSGLATAD-PEAFALIA-LGLL----VKGGIFVSGLWLPLTHSE 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AHYSTCMLLAGILLKMGAYGLVRINIellprAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGi 326
Cdd:PRK07234  214 AEPPVSALLSGVVVKAGVFPLVRCAL-----DVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA- 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 327 gslsdtGLNGAILQiISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIfsmasLALPGMSGFVAEFII 406
Cdd:PRK07234  288 ------PLVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASFSI-----AGFPLLAGFVSKVLT 355
                         330
                  ....*....|..
gi 1151119848 407 FFGIITSQKYLL 418
Cdd:PRK07234  356 LKNLLPWQAIAL 367
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
91-482 1.42e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 106.44  E-value: 1.42e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  91 LSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSrDILLFFIMWELELIPVYLLL-------SMWGG 163
Cdd:PRK06589   90 LLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTISTAFLIghtrnniSLSGG 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 164 KKRLysatKFLLYTAggsifLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAfavKSPIIPFHTWLPdT 243
Cdd:PRK06589  169 YKYL----KILMISA-----LLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIA---KTAIFPVHSWLP-A 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 244 HGEAHYSTCMLL-AGILLKMGAYGLVRINIEL--LPRAHSIF--SPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSH 318
Cdd:PRK06589  236 AMVAHYPVSALLhAVIVVKTGLFCIYKILLYIfgLSYLQRIFaeFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 319 MGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMS 398
Cdd:PRK06589  316 LSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 399 GFVAEFIIFFGIitSQKYLLMTKILITFVTAIGMILTPIYSLSMLrqmFYGYKLFNTPNSYFFDSGPRELFISISILIPV 478
Cdd:PRK06589  396 GFISKFLILLAA--SEQNQPWLSIIVMLVVIASSILSALYLLKIL---SSIYKPSLSENSFITKSLPYLMQISVITCCCA 470

                  ....
gi 1151119848 479 IGIG 482
Cdd:PRK06589  471 LTLF 474
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
88-448 1.80e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 106.36  E-value: 1.80e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  88 IDGLSIGPILLTGFITTLATL-AAHPVTRESRL-----FHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMW 161
Cdd:PRK12662   74 VDILSATMLVLVNFIAVMSVLyGIYPNRKEISVnkipsFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMG 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 162 GGKKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAF---AVKSPIIPFHT 238
Cdd:PRK12662  154 RDKKALVAAFEYLIIGTIGATFYL---IGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMvglFIKAALFPFHK 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 239 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIEL----LPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYS 314
Cdd:PRK12662  231 WLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 315 SVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLAL 394
Cdd:PRK12662  311 SISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGM 390
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1151119848 395 PGMSGFVAEFIIFFGIITSQKYLLMtkilitFVTAIGMILTPIYSLSMLRQMFY 448
Cdd:PRK12662  391 PPTSGFVAKWYILDAFIKSNAWIGL------VVLLVGSGLSVIYVWKIVEALYF 438
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
86-425 2.44e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 105.80  E-value: 2.44e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGI----DGLSIGPILLTGFITTLATLAAHP---VTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLL 158
Cdd:PRK07691   69 FGIvfvaDMFAALLVLTSSIITFLVILYSFQtigIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLI 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 159 SMWGGKKRLYSATKFLLYTAGGSIFLLMGIlgiGLYSSNEPTLNFQMLTNR-----SYPVGLEIIFYIGFLIAFAVKSPI 233
Cdd:PRK07691  149 VIGGTKIQLRESIKYVLINVVSSAFFVVAV---AILYSVVGTLNMADISVKiaelsAGQTGLITVVAILFLFVFATKAGL 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 234 IPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAY 313
Cdd:PRK07691  226 FPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIY 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 314 SSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIfSMASLA 393
Cdd:PRK07691  306 NIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFI-AALSLA 384
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1151119848 394 -LPGMSGFVAEFIIFFGIITSQKYLLMTKILIT 425
Cdd:PRK07691  385 gIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
111-449 1.64e-23

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 103.13  E-value: 1.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 111 HPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGiLG 190
Cdd:PRK06525  106 HPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLA-AA 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 191 IGLYSSNeptlNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRI 270
Cdd:PRK06525  185 TLFLQTG----TFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA 260
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 271 NIELLPRAHSIFspWLM-IIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSL---SDTGLNGAILQIISHGF 346
Cdd:PRK06525  261 IQSMGPIPHVIG--YVGaVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAF 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 347 IGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFG--IITSQKYLLMTKILI 424
Cdd:PRK06525  339 AKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgfELSVEYWILLPAMVL 418
                         330       340
                  ....*....|....*....|....*
gi 1151119848 425 TFVTAIGMIltpIYSLSMLRQMFYG 449
Cdd:PRK06525  419 LLIESVASF---AWFLRWFGRVVFG 440
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
13-484 3.48e-23

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 102.32  E-value: 3.48e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHRGnkVIRWYTICICLVDLLLTtyAFCYHFKLDDPLIqltenykwiqfFDFYWRFGIDGLS 92
Cdd:PRK06458    7 FALLLLIPLLASLLLFALRKRR--LVATLNVLGITLTLILA--LWLVFTVPDAGEI-----------FAAGLWFFIDDLN 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 IGPILLTGFITTLATLAAHPVTRESR------------------LFHFLML-AMYSGQIGpfssrdillffIMW---ELE 150
Cdd:PRK06458   72 VFFLALIGVVGFLTSLYSIGYMRHEVehgelspvtlrlyygmyqLFLFTMLlALTSNNLG-----------LMWvaiEAT 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 151 LIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGIlgIGLYSSNEPTL---NFQMLTNRSYPVGLE---IIFYIGF- 223
Cdd:PRK06458  141 TLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGT--ILVYANAATVMgdgEMAILWTELLKHASLldpTLMKLAFv 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 224 --LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMII-GSIQIIYAALT 300
Cdd:PRK06458  219 flLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfGLLSVLVAAFF 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 301 SLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKI 380
Cdd:PRK06458  299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLT 378
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 381 FTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGMIltpiysLSMLRQMFYGYKLFNTPNSyf 460
Cdd:PRK06458  379 GWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAAL------VRRVAGMVFGEPPEAVNRG-- 450
                         490       500
                  ....*....|....*....|....
gi 1151119848 461 fDSGPRELFISISILIPVIGIGIY 484
Cdd:PRK06458  451 -DLGWLTTSPMFVHLVLVLVLGLY 473
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
11-422 9.56e-23

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 101.89  E-value: 9.56e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  11 PWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWIQFfdfywRFGIDG 90
Cdd:PRK06521    6 QLLLLSLLLYLALGLAGLLLLRRPRLAIRLSGPTGLLGGLLGLASGLTALFAGPTLAAVLPLGLPFLPF-----HLRLDA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  91 LSIGPILLTGFITTLATLAAHPVTRES-----RLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKK 165
Cdd:PRK06521   81 LSAFFLLVISLLGAAASLYSLGYFREYegkgpGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 166 RLYSATKFLLYTAGGSIFLLMgiLGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHG 245
Cdd:PRK06521  161 EIRRAGFLYLLMAHAGALAIL--LAFGLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 246 EA--HYSTcmLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFII 323
Cdd:PRK06521  239 AApsHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIF 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 324 IGIG-----------SLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASL 392
Cdd:PRK06521  317 VGLGlamvfiaygmpLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAIS 396
                         410       420       430
                  ....*....|....*....|....*....|
gi 1151119848 393 ALPGMSGFVAEFIIFfgiitsQKYLLMTKI 422
Cdd:PRK06521  397 ALPPLNGFVSEWLLL------QSLLSSPGL 420
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
85-413 4.63e-22

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 99.81  E-value: 4.63e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  85 RFGIDGLSIGPILLTGFITTLATL-------AAHPVTRESRLFHFLMLAMYSgQIGPFSSRDILLFFIMWEL-ELIPVYL 156
Cdd:PRK08667   72 TFHIDRLAAFFIILIGLVSLCVAIyslgyneHMSSNERANLLSALTALFILS-MLGVVASANTFSFLFFWEImALSSFFL 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 157 LLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLtnrSYPVGLEIIFYIGFLIAFAVKSPIIPF 236
Cdd:PRK08667  151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG---SFELSPL---GASAGILSLVFLLLFLGFGIKAGIIPF 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 237 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIellprahSIFSP---WLMII---GSIQIIYAALTSLGQRNLKKR 310
Cdd:PRK08667  225 HKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM-------DVLSPelwWGVLIllaGSISALLGVIYALKEHDLKGL 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 311 IAYSSVSHMGFIIIGIG-----------SLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPK 379
Cdd:PRK08667  298 LAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1151119848 380 IFTIFSIFSMASLALPGMSGFVAEFIIFFGIITS 413
Cdd:PRK08667  378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQS 411
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
88-491 1.31e-21

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 97.58  E-value: 1.31e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  88 IDGLSIGPILLTGFITTLATLAAHPVTRESRLFHFLMLAMYS--GQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKK 165
Cdd:PRK05777   71 VDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFAllGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 166 R-LYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNF-----QMLTNRSYPVGLeiIFYIGFLIA-FAVKSPIIPFHT 238
Cdd:PRK05777  151 RsLEAAIKYFVLGALASGFLLYGMSLLYGATG---SLSFagiakALADGSGNSLLL--LFGLVFLLVgLAFKLSAVPFHM 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 239 WLPDTHGEAHYSTCMLLAGILlKMGAYG-LVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVS 317
Cdd:PRK05777  226 WTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 318 HMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALF-FLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFsMASLA-LP 395
Cdd:PRK05777  305 HAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIF-MLSLAgIP 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 396 GMSGFVAEFIIFFGIITSQKYLLmtkilitfvTAIGMILTPI---YSLSMLRQMFygyklFNTPNS-YFFDSGPRELFIS 471
Cdd:PRK05777  384 PTAGFWGKFYVFEAAVEAGLWWL---------AVIGVLNSAIgafYYLRVIKLMY-----FDEPPRdAPVNWPLSAGGAV 449
                         410       420
                  ....*....|....*....|.
gi 1151119848 472 ISIL-IPVIGIGIYPDFILSF 491
Cdd:PRK05777  450 LSVSaLLVLVLGIFPQPLLDL 470
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
14-489 2.13e-21

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 97.14  E-value: 2.13e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  14 TIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTENYKWiqffdfywRFGIDgLSI 93
Cdd:PRK08377    6 SLLIALPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGGWKP--------PVGIN-LYI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  94 GP--------ILLTGFITTLATLAA---HPVTRESRLFHFLMLamysGQIGPFSSRDILLFFIMWELELIPVYLLLSMWG 162
Cdd:PRK08377   77 GPfaalfvliIAIVSFIMSIFSLKAvevEPIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 163 GKKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSNEPTLNFQMLTNRS-------YPVGLEIIFYigfliAFAVKSPIIP 235
Cdd:PRK08377  153 TGEAAEASMKYIVLGGIGSSFFL---IGVALIYGATGTLNMAHIAQLAgtidptvAQVGLALLIF-----GLAVEAELFP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 236 FHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInIELLPRAHSI--FSPWLMIIGSIQIIYAALTSLGQRNLKKRIAY 313
Cdd:PRK08377  225 LNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARI-LYLMQNANGWssVLKLVIIMATLTVFFAELSALRQKNVKRMIAY 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 314 SSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLA 393
Cdd:PRK08377  304 SSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVG 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 394 LPGMSGFVAEFIIFFGIITSQKYLLMTKILitfvtaIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDsgprelFISIS 473
Cdd:PRK08377  384 IPLFNVFWSKFRIILAGLSAGYTWPVALVL------GASVVEAVYYFRLIHTMWFKGEGERIRENAAIG------IILLL 451
                         490
                  ....*....|....*.
gi 1151119848 474 ILIPVIGIGIYPDFIL 489
Cdd:PRK08377  452 LAALIVVIGIYPTPFW 467
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
120-407 7.13e-21

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 95.42  E-value: 7.13e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 120 FH--FLMLAMysGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSN 197
Cdd:PRK12665  113 FLptYLILVA--GVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFL---IGIALVYAA 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 198 EPTLNFQMLTNR--SYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELL 275
Cdd:PRK12665  188 TGTLNMADLAVRldELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLF 267
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 276 PrAHSIFSPwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLA 355
Cdd:PRK12665  268 P-GGGLDTL-LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVV 345
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1151119848 356 GTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIF 407
Cdd:PRK12665  346 GLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
PRK12646 PRK12646
DUF4040 family protein;
76-449 3.65e-20

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 94.05  E-value: 3.65e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  76 WIQFFDFYWRFGIDGLSIGPILLTGFITTLATLAAHPVTRES-----RLFHFLMLAMYSgQIGPFSSRDILLFFIMWELE 150
Cdd:PRK12646   64 WMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkdnlpRFYFYLTLFMFS-MIGIVLSDNTILMYVFWELT 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 151 LIPVYLLLSMWGGKK-RLYSATKFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAV 229
Cdd:PRK12646  143 SVSSFLLISYWYNNGdSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFT 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 230 KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSpwLMIIGSIQIIYAALTSLGQRNLKK 309
Cdd:PRK12646  223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYI--VTFVGLITMLFGSITALKQWDLKG 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 310 RIAYSSVSHMGFIIIGIG--------------SLSDTGLNGAILQIISHGFIGAALFFLAG-----TGYDRLRLLyldem 370
Cdd:PRK12646  301 ILAYSTISQLGMIMAMVGigggyaqhqqdaiaSIYVFVLFAALFHLMNHAIFKCALFMGVGiidheAGTRDIRIL----- 375
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 371 GGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITS---QKYLLMTKILITFVTAIGMILTPIYSLSMLRQMF 447
Cdd:PRK12646  376 SGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVF 455

                  ..
gi 1151119848 448 YG 449
Cdd:PRK12646  456 WG 457
PRK12650 PRK12650
DUF4040 family protein;
139-440 2.18e-19

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 91.64  E-value: 2.18e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 139 DILLFFIMWELELIPVYLLLSMWGGKKRLySATKFLLYTAGGSIFLLMGiLGIGLYSSNEPTLNfQMLTNRSYPVGLEII 218
Cdd:PRK12650  131 DVVVLFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAA-VAIAATQTGTTSLS-GILHSDVWAEKPGLT 207
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 219 FYIGFLIAFAV--KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRiniellprahsiFSP---------WLM 287
Cdd:PRK12650  208 TVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLR------------FSPvfhdvavwnWLL 275
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 288 II-GSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAG-----TGYDR 361
Cdd:PRK12650  276 IIvGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGvvdhqAGTRD 355
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 362 LRllyldEMGGMAIPMPKIFTIFSI--FSMAslALPGMSGFVAE---FIIFFGIITSQKYLlmtkILITFVTAIGMILTP 436
Cdd:PRK12650  356 IR-----RLGSLWRRMPFTFVSVTIaaLSMA--AVPPLFGFVSKegmLTAFLEAPGGNAGV----VLLLVGAALGAVFTF 424

                  ....
gi 1151119848 437 IYSL 440
Cdd:PRK12650  425 AYSA 428
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
13-485 2.34e-19

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 91.45  E-value: 2.34e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLI-FLFPHRGNKVIRWYTICICLVDLLLTtyAFCYHFKLDDPLIQLTENykWIQFFDFYWRFGIDGL 91
Cdd:TIGR00940   1 LHSAFILPPFAASLIpILYPSDQRIHIGWFVLAIPLVCFLYT--LGLYPYTASGGVLHYTID--WVPELGLNFTLYMDGL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  92 S-IGPILLTGFITTLATLAAHPVTRESRL--FHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGK-KRL 167
Cdd:TIGR00940  77 AlLFSLLITGIGVLVVLYSIYYLSKEEPLpnFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRaHSR 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 168 YSATKFLLYTAGGSIFLLMGILGIGL----YSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLiafaVKSPIIPFHTWLPDT 243
Cdd:TIGR00940 157 YGAQKSLTITVFGGLAMLGGLILLGKitgsFSIDAVIASADAIRNSPLFGTAMVLVLLGAF----TKSAQFPFHIWLPDA 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 244 HGEAHYSTCMLLAGILLKMGAYGLVRINIELlprAHSIFSPWLM-IIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFI 322
Cdd:TIGR00940 233 MEAPTPVSAYLHSATMVKAGLYLLARFTPVF---AGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 323 --IIGIGSLS-----------DTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSM 389
Cdd:TIGR00940 310 mvLLGLGSPSyhyqgddskiyALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASA 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 390 ASLALPGMSGFVAEFIIFFGIITSQKYLLMT----KILITFVTAIGMILTPIYSLSMLRQMFYG-YKLFNTPNSYffDSG 464
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFAEAITAHLVNPFDtvtlGYLFPYVATVASVFTFVYSLRFIHGVFFGrPKPEDLPRKP--HEP 467
                         490       500
                  ....*....|....*....|..
gi 1151119848 465 PRELFISISILIP-VIGIGIYP 485
Cdd:TIGR00940 468 PRWMLASPDILVLlVLVFGLFP 489
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
8-451 3.27e-18

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 87.96  E-value: 3.27e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848   8 NFFPWLTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTTYAFCYHFKLDdpliQLTENYKWIQFFDFYWRFG 87
Cdd:PRK12649    2 DSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGWFAAAIAFTSFALIAQVAPEVIHGT----IITGSISWLPSAGVEFSIY 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  88 IDGLS--IGPILLTGFITTLATLAAHPVTRE--SRLFHFLMLAMYSgQIGPFSSRDILLFFIMWELELIPVYLLLSMWGG 163
Cdd:PRK12649   78 ADGLAvlIGLIASGIGVIIMSYSNGYMSHKEdlPRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITSFMLIGYWRH 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 164 K-KRLYSATKFLLYTAGGSIFLLMGILGI----GLYSSNEPTLNFQMLTN-RSYPVGLEIIFYIgfLIAFAVKSPIIPFH 237
Cdd:PRK12649  157 RpESVYGATKSLLITAGGGLFMFAGFLLLhvitGTYDIATILQDSELIENiKGHPLFLITLILI--FIGAAAKSAQGPFY 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 238 TWLPDTHGEAHYSTCMLLAGILLKMGAYglvrinieLLPRAHSIFS---PWLMII---GSIQIIYAALTSLGQRNLKKRI 311
Cdd:PRK12649  235 IWLPNAMEAPTPVSAFLHSATMVKAGVY--------LVARIHPIFSgteAWFILVsgtGMITMVLAGFLAFRQTDIKAIL 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 312 AYSSVSHMGFIIIGIGSLS----DTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIF 387
Cdd:PRK12649  307 AYSTISQLAYLMTMYGYTTyhepGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIA 386
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1151119848 388 SMASLALPGMSGFVAEFIIFFGIITSQKYL-LMTKILITFVTAIGMILTPIYSLSMLRQMFYGYK 451
Cdd:PRK12649  387 ALAMAGIPPLNGFLSKEMFYETSVEMGALIgGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGER 451
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
139-407 1.02e-17

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 86.10  E-value: 1.02e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 139 DILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILgigLYSSNEPTLNFQMLTnrsypvGLEII 218
Cdd:PRK12668  114 DLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGIL---LHYAETGSFAFGAIA------GLGGT 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 219 FYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRinieLLPRAHsifspWLMIIGSIQIIYAA 298
Cdd:PRK12668  185 AAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGTE-----LLIYIGAAMAVYGV 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 299 LTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTgydrlrLLY------LDEMGG 372
Cdd:PRK12668  256 FFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGA------VLYrtgtekLTELGG 329
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1151119848 373 MAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIF 407
Cdd:PRK12668  330 LYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
70-402 1.37e-16

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 82.66  E-value: 1.37e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  70 LTENYKWIQFFDFYWRFGIDGLSIGPILLTGFITTLATLAA------HPvtRESRLFHFLMLAMYSgQIGPFSSRDILLF 143
Cdd:PRK12647   44 VRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAggylkgHP--DLGRFYSYILLFMAS-MLGLVLSDNLITL 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 144 FIMWELELIPVYLLLSMWGGKKRLY-SATKFLLYTAGGSIFLLMGILGIG----------LYSSNEptlnfqMLTNRSYP 212
Cdd:PRK12647  121 FVFWELTSITSFLLIGFNHEREAARrAALQALLVTGGGGLALLAGLILLGnvtgtyslseLLASGD------VIREHPLY 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 213 VGLEIIFYIGfliAFAvKSPIIPFHTWLPD-----THGEAH-YSTCMLLAGIllkmgaYGLVRINIELlpRAHSIFSPWL 286
Cdd:PRK12647  195 LAILLLVLGG---AFT-KSAQFPFHFWLPNameapTPVSAYlHSATMVKAGI------YLLARLNPVL--GGTPLWQTIL 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 287 MIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAG-----TGY-D 360
Cdd:PRK12647  263 PLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGiidheTGTrD 342
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1151119848 361 RLRLlyldemGGMAIPMPKIFTIFSIFSMASLALPGMSGFVA 402
Cdd:PRK12647  343 ITKL------GGLRRAMPITAAAALLAALSMAGLPPLFGFLA 378
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
135-461 2.09e-16

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 81.11  E-value: 2.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 135 FSSRDILLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILgiglyssneptLNFQMLTNRSYPV 213
Cdd:MTH00094   79 FVSSNMLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAAFFSFPFLFVYL-----------KNFFFFSLCYFDF 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 214 GLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInielLPRAHSIFSPWLMIIGSIQ 293
Cdd:MTH00094  148 FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI----LGSLNFVYNNFWIIFSLLG 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 294 IIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGY--DRLRLLYLdeMG 371
Cdd:MTH00094  224 MILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYhiSKSRLIYF--MN 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 372 GMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILItfvtaigMILTPIYSLSMLRQMFYGYK 451
Cdd:MTH00094  302 SFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFY-------FLVSFYYSLFLIVSSFMGKK 374
                         330
                  ....*....|
gi 1151119848 452 LFNTPNSYFF 461
Cdd:MTH00094  375 FSNFNNFNVG 384
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
69-440 2.25e-16

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 82.28  E-value: 2.25e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  69 QLTENYKWIQFFDFYWRFGIDGLSIGPILLTGFITTLATL--AAHPVTRESRLFHF--LMLAMYSGQIGPFSSRDILLFF 144
Cdd:PRK12644   53 APTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFaaELVAFAGAMFGLVTSDNLLLLY 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 145 IMWELELIPVYLLLSMWGGKKR-LYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVGLEIIFYIGF 223
Cdd:PRK12644  133 VFWELTTVLSFLLIGHYAERAAsRRAALQALLVTTAGGLAMLVGIIILGQAAG---TYRLSELLADPPTGPAVSVAVVLI 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 224 LIAFAVKSPIIPFHTWLPDT-----------HGEAhystcMLLAGILLkmgayglvrinIELLPRAHSIFSPWLMII--- 289
Cdd:PRK12644  210 LVGALSKSAIVPFHFWLPGAmaaptpvsaylHAAA-----MVKAGIYL-----------VARLAPGFADVPVWRPTVlvl 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 290 GSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFII--IGIGSlSDTGLNGAILqIISHGFIGAALFFLAG-----TGYDRL 362
Cdd:PRK12644  274 GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTvlVGIGT-RDAALAGLAM-LLAHALFKAALFLVVGiidhsTGTRDI 351
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1151119848 363 RllyldEMGGMAIPMPKIFtIFSIFSMASLA-LPGMSGFVAEFIIFFGIITSQkYLLMTKILITFVTAIGMILTPIYSL 440
Cdd:PRK12644  352 R-----KLSGLGRRQPVLA-VVAALAAASMAgLPPLLGFVAKEAALEAVLHDG-ALGPAGPVVLAGIVLGSILTVAYSL 423
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
136-489 2.57e-16

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 81.15  E-value: 2.57e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 136 SSRDILLFFIMWELELIPVYLLLSMWGGKKR-LYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVG 214
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGISLIYGFTG---SLNFEDLLLFLSNGM 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 215 LEIIFY----IGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIG 290
Cdd:TIGR01770 197 LNISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIA 276
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 291 SIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALF--FLAGTGYDRLRLLYLD 368
Cdd:TIGR01770 277 FLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgvLSLLRSYKDEWIEYIS 356
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 369 EMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLmtkiliTFVTAIGMILTPIYSLSMLRQMFy 448
Cdd:TIGR01770 357 DFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWL------AVIAVLTSVIGAFYYLRVVKVMY- 429
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1151119848 449 gyklFNTPNSYFFDSGPR--ELFISISILIPVIGIGIYPDFIL 489
Cdd:TIGR01770 430 ----FDKPERRIPSNPQSkaQSLLLSISALFILFLGLFPSLIL 468
PRK12666 PRK12666
putative monovalent cation/H+ antiporter subunit D; Reviewed
86-432 3.09e-16

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237166 [Multi-domain]  Cd Length: 528  Bit Score: 81.44  E-value: 3.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  86 FGI----DGLSIGPILLTGFITTLATLAAhpVTRESR-------LFHFLMLamysGQIGPFSSRDILLFFIMWELELIPV 154
Cdd:PRK12666   72 FGIvlvlDRLSALMLLLTALLALAALLYA--LAGWDRagphfhaLFQFQLM----GLNGAFLTGDLFNLFVFFEVLLAAS 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 155 YLLLSMWGGKKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSSNEPTLNFQMLTNR--SYPVGLEIIFYIG---FLIAFAV 229
Cdd:PRK12666  146 YGLLLHGSGRARVRAGLHYVAINLVASSLFL---IGVGLIYGVTGTLNMADLAQRiaQLPAADRALLEAGaalLLVVFLI 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 230 KSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLVRINIELLPRA----HSIFSPWLMIIGSIQIIYAALTSLGQR 305
Cdd:PRK12666  223 KAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEagasAGFGQDWLLPGGLATLAFGAIGVLAAQ 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 306 NLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLA-------GTGYDRL---RLLYLDEMG---- 371
Cdd:PRK12666  302 RLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRLavtPELYDLDEEeeee 381
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1151119848 372 -GMAIPMPKIF--TIFSIFSMASLALPGMSGFVAEFIIFFGII----TSQKYLLMTKILIT-FVTAIGM 432
Cdd:PRK12666  382 vGVAIPATMALlgLLFFICALALAGLPPLSGFLGKFALLQALLnppgAGAAWWLWALVLLSgLAALIAL 450
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
177-443 3.74e-16

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 81.03  E-value: 3.74e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 177 TAGGSIFLLMGILGIGLYS-------SNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHY 249
Cdd:PRK08042  133 SKEGKLWFALGRLGTLLLAiacwllwQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASA 212
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 250 STCMLLAGILLKMGAYGLVRINIeLLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGS- 328
Cdd:PRK08042  213 PAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAg 291
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 329 ----------LSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMS 398
Cdd:PRK08042  292 vtgialeqpaLIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLN 371
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1151119848 399 GFVAEFII---FFGIITSQKY-------LLMTKILITFVTAIgMILTPIYSLSML 443
Cdd:PRK08042  372 GFAGEWVIyqsFFKLSNSGAFvarllgpLLAVGLAITGALAV-MCMAKVYGVTFL 425
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
70-504 2.93e-15

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 78.81  E-value: 2.93e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  70 LTENYKWIQFFDFYWRFGIDGLSIGPILLTGFITTLATLAA--HPVTRESRLFHF---LMLAMySGQIGPFSSRDILLFF 144
Cdd:PRK12645   58 VMKTLPWIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSiyYLSKKKEQLGNFyvyLLLFM-GAMLGVVLSDNLIVLY 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 145 IMWELELIPVYLLLSMWGGKKR-LYSATKFLLYTAGGSIFLLMGILGIGL----YSSNEPTLNFQMLTNRSYPVGLEIIF 219
Cdd:PRK12645  137 LFWELTSISSFLLISYWYEREAsRYGAQKSMLITVFGGLSMLGGFILLYImtgsFSIREMIANADEIQNSPLFIPAMILI 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 220 YIGfliAFAvKSPIIPFHTWLPD-----THGEAH-YSTCMLLAGILLkmgayglvrinielLPRAHSIF---SPW---LM 287
Cdd:PRK12645  217 LLG---AFT-KSAQFPFYIWLPDameapTPVSAYlHSATMVKAGIYL--------------VARFTPIFagsQVWfwtVT 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 288 IIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFII--IGIGSLS-----------DTGLNGAILQIISHGFIGAALFFL 354
Cdd:PRK12645  279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMslLGIGAASlhyqgddskiyAAAITAAIFHLINHATFKGSLFMI 358
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 355 AG-----TGYDRLRLLyldemGGMAIPMPKIFTIFSI--FSMAslALPGMSGFVAEFIIFFGIITSQKYLLMT----KIL 423
Cdd:PRK12645  359 VGivdheTGTRDIRKL-----GGLMTIMPITFTIALIgaLSMA--GLPPFNGFLSKEMFFESMLNATEANLFSldtwGVL 431
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 424 ITFVTAIGMILTPIYSLSMLRQMFYG-YKLFNTPNSYffDSGPRELFISISIL-IPVIGIGIYPDfILSFSVDK--VEAI 499
Cdd:PRK12645  432 FPVIAWVASVFTFVYSIIFIFKTFFGkYKPEQLPKKA--HEAPIGMLISPIILaSLVVVFGLFPN-ILTNSIIEpaVSAI 508

                  ....*
gi 1151119848 500 LSNFL 504
Cdd:PRK12645  509 LPTLI 513
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
45-407 6.57e-15

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 77.31  E-value: 6.57e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  45 ICLVDLLLTTYAFCYHFKLDDPLIQLtENYKWIQFFDFYWRFGI--DGLSIGPILLTGFITTLATLAAHPVTRES----- 117
Cdd:MTH00032   34 ICMGSSTLIALFLAYEVLINDAVVHI-ELYKWIESEIFITHIGLlyDTLSVTMLLVISSISTLVHIYSTSYMSDDphvpr 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 118 -----RLFHFLMLAMysgqigpFSSRDILLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFLLYTAGGSIFLLMGI--- 188
Cdd:MTH00032  113 flcylSLFTFLMMVL-------VTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGMvli 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 189 -----------LGIGLYSSNEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAG 257
Cdd:MTH00032  186 yktigsldfltFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAA 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 258 ILLKMGAYGLVRIN--IELLPRAHSIFSpwlmIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGslSDTGLN 335
Cdd:MTH00032  266 TMVTAGVFLMIRSFplFEKAPLTLLIIT----IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIG--IEGSHN 339
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1151119848 336 GAILQIISHGFIGAALFFLAGTGYDRLRLLYLD--EMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIF 407
Cdd:MTH00032  340 VGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDmrKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
13-449 1.63e-12

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 70.22  E-value: 1.63e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHRGNKVIRWYTICICLVDLLLTtyAFCYHFKLDDPLIQLTenYKWIQFFDFYWRFGIDGLS 92
Cdd:PRK12648    3 LLLLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVLL--ALLYPAVAAGEVIRAE--IEWLPALGLNLSLRLDGLA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  93 -IGPILLTGfITTLATLAAH-------PVtreSRLFHFLMLAMYSgQIGPFSSRDILLFFIMWELELIPVYLLLSMWggk 164
Cdd:PRK12648   79 wLFALLILG-IGLLVVLYARyylspadPV---PRFFSFLLLFMGA-MLGIVLSGNLILLVVFWELTSLSSFLLIGYW--- 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 165 KRLYSATK----FLLYTAGGSIFLLMGILGIG-----------LYSSNeptlnfQMLTNRSYPVGLEIIfyigfLIAFAV 229
Cdd:PRK12648  151 HHRADARRgarmALTVTGAGGLALLAGVLLLGhivgsydldvvLAAGD------LIRAHPLYPPALVLI-----LLGAFT 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 230 KSPIIPFHTWLPdtHGEA---------HYSTcMLLAGILLkmgayglvrinielLPRAHSIFS---PWLMIIGS---IQI 294
Cdd:PRK12648  220 KSAQFPFHFWLP--HAMAaptpvsaylHSAT-MVKAGVFL--------------LARLWPVLAgteEWFWIVGGaglITL 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 295 IYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAG-----TGYDRLRLLylde 369
Cdd:PRK12648  283 LLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGiidheTGTRDMRRL---- 358
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 370 mGGMAIPMPKIFTIFSIFSMASLALPGMSGFVA-EfiIFFGIITSQKYLLMTKILITFVTAIGMILTPIYSLSMLRQMFY 448
Cdd:PRK12648  359 -SGLRRLMPITATLAMVAAAAMAGVPLLNGFLSkE--MFFAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFF 435

                  .
gi 1151119848 449 G 449
Cdd:PRK12648  436 G 436
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
119-440 2.56e-12

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 69.34  E-value: 2.56e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 119 LFHFLMLAMysgqigpFSSRDILLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFLLYTAGGSIFLLMGILGIGLYSSn 197
Cdd:MTH00020  119 LFTFLMVVL-------VTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAnKAAIKAMLVNRVGDIGLLLAMFLLWDRFG- 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 198 epTLNFQMLTNRSYPVGLEIIFYIGFLIAFAV--KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRIN--IE 273
Cdd:MTH00020  191 --SLDFSSVFNMVVSAPSSDITLICLFLFIGAvgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFE 268
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 274 LLPRAHSIFSpwlmIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIG-SLSDTGLngaiLQIISHGFIGAALF 352
Cdd:MTH00020  269 QAPLALIIVT----IVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGlSHYSISL----FHLMNHAFFKALLF 340
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 353 FLAGTGYDRLrllyLDE-----MGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIfFGIITSQKYLlmtkILITFV 427
Cdd:MTH00020  341 LSAGSVIHAL----SDEqdmrkMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI-LELAFGQYYL----IFAYWL 411
                         330
                  ....*....|...
gi 1151119848 428 TAIGMILTPIYSL 440
Cdd:MTH00020  412 GCFSALLTAFYSI 424
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
136-455 2.76e-11

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 65.74  E-value: 2.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 136 SSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSAT-KFLLYTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNRSYpvg 214
Cdd:MTH00211  128 SANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAAlQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLT--- 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 215 leiIFYIGFLIAFAVKSPIIPFHTWLPDTHgEA--------HYSTcMLLAGILLkmgaygLVRINiELLPRAHSIFSpWL 286
Cdd:MTH00211  205 ---LFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsallHSST-MVVAGVFL------LIRLS-PLFQNNQLILG-AV 271
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 287 MIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGsLSDTGLngAILQIISHGFIGAALFFLAGTG-YDRLRLL 365
Cdd:MTH00211  272 LLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLG-LNQPQL--AFLHICTHAFFKAMLFMCSGSIiHGLNNEQ 348
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 366 YLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMtkiliTFVTAIGMILTPIYSLSMLRQ 445
Cdd:MTH00211  349 DIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWA-----LLLTLLATSLTAAYSFRLIFL 423
                         330
                  ....*....|
gi 1151119848 446 MFYGYKLFNT 455
Cdd:MTH00211  424 SLGGYPRFLS 433
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
13-400 2.70e-09

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 59.40  E-value: 2.70e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  13 LTIVVVLPIAGGSLIFLFPHR-GNKVIRWYTICICLVDLLLTTYAFCYHFKLDDPLIQLTeNYKWIQF--FDFYWRFGID 89
Cdd:PRK06590    5 LWLIVLLPLIGALILGLFGRRiGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQT-LWTWISVgdFDVDFGLRVD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  90 GLSIGPILLTGFITTLATLAA----HPVTRESR------LFHF--LMLAMysgqigpfsSRDILLFFIMWELELIPVYLL 157
Cdd:PRK06590   84 GLSATMLVVVTGVSFLVHIYSigymAHDEGYRRffaylnLFTFsmLMLVL---------SDNLLQLFFGWEGVGLCSYLL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 158 LSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILGIGLYSSnepTLNFQMLTNRSYPVGLE---IIFYIGFL--IAFAVKS 231
Cdd:PRK06590  155 IGFWYKKpSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFG---SLNYDEVFAAAPQFFGLgwsALTLICLLlfIGAMGKS 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 232 PIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgayglvrinielLPRAHSIF--SP----WLMIIGSIQIIYAA 298
Cdd:PRK06590  232 AQFPLHTWLPDamegpTPVSAliHAAT-MVTAGVYL--------------VARMSPLFelSPeallFVAIVGAVTALFAA 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 299 LTSLGQRNLKKRIAYSSVSHMGFIIIGIGSlsdTGLNGAILQIISHGFIGAALFFLAGT---GYDrlrllylDE-----M 370
Cdd:PRK06590  297 FIGLVQTDIKRVLAYSTMSQLGYMFLALGV---GAYAAAIFHLMTHAFFKALLFLGAGSvihAMH-------HEqdirkM 366
                         410       420       430
                  ....*....|....*....|....*....|
gi 1151119848 371 GGMAIPMPKIFTIFSIFSMASLALPGMSGF 400
Cdd:PRK06590  367 GGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
136-356 2.81e-09

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 59.60  E-value: 2.81e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 136 SSRDILLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFLLYTAGGSIFLLMgILGIGLYSSNEPTLNfQMLTNRSYPVG 214
Cdd:MTH00208  156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNRIGDIGIIL-FLSLSLINFNSWNLN-EILSLNNSNSF 233
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 215 LEIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIniELLPRAHSIFSPWLM 287
Cdd:MTH00208  234 LINILLFGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------LIRT--SPLISNSPWFLSLCL 304
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151119848 288 IIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIgslsdtGLNG---AILQIISHGFIGAALFFLAG 356
Cdd:MTH00208  305 ILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAI------GLNQpnlALFHICTHAFFKAMLFLCSG 370
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
122-475 4.58e-09

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 58.06  E-value: 4.58e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 122 FLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILgiglyssneptL 201
Cdd:MTH00200    8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL-----------L 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 202 NFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGIllkmGAYGLVRINIELLPRAHSI 281
Cdd:MTH00200   77 NAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTW----QKLAPFALLIQLAPALNSN 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 282 FspwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDR 361
Cdd:MTH00200  153 I---LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINS 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 362 LRllyldeMGGMAIPMPKIFTIFSIFSMAslALPGMSGFvaeFIIFFGIITSQKYLLmtkilitFVTAIGMILTPIYSLS 441
Cdd:MTH00200  230 LS------SSKTKNPILSMLLGLTLLSLG--GLPPLTGF---FPKWLILQELSKQGL-------FIYATILLLGSLLSLF 291
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1151119848 442 MLRQMFYGYKLFNTPNSYFFDSGPRELFISISIL 475
Cdd:MTH00200  292 FYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLV 325
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
118-400 5.17e-09

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 58.88  E-value: 5.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 118 RLFHFLMLaMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKK-RLYSATKFLLYTAGGSIFLLMGILGigLYSS 196
Cdd:PRK07376  123 RFFAYLSL-FSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKgAADAAQKAFVVNRVGDFGLLLGILG--LFWA 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 197 NEpTLNFQMLTNR--------SYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLK 261
Cdd:PRK07376  200 TG-SFDFDGIADRlselvssgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFLV 277
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 262 MGAYGLvrinIELLPRAHSIFSpwlmIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSlsdtGLNGA-ILQ 340
Cdd:PRK07376  278 ARMYPV----FEQFPAVMTVIA----WTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGC----GAYSAgLFH 345
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1151119848 341 IISHGFIGAALFFLAGT---------GYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGF 400
Cdd:PRK07376  346 LMTHAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
96-329 7.14e-09

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 58.26  E-value: 7.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  96 ILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRlysatKFLL 175
Cdd:PRK06459   50 SIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR-----PAFV 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 176 YTAGGSIFLLMGILGIGLYSSNEPTLNFQMLTNrsyPVGLeIIFYIGFLIafavKSPIIPFH--TWLPDTHGEAHYSTCM 253
Cdd:PRK06459  125 FMAFGELSTVLILAGFAWAFIISGTTNFSYLPS---PVPL-ILASFGFII----KMGMMPFLvsEWLPIAHGNAPSNFSA 196
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1151119848 254 LLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSL 329
Cdd:PRK06459  197 ILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLY 272
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
137-430 1.03e-08

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 57.37  E-value: 1.03e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 137 SRDILLFFIMWELELIPVYLllsMWGGKKR----LYSATKFLLYTAGGSIFLLMG---ILGIGLYSSNEPTLNFQMLTNR 209
Cdd:PRK02504  129 ATELVMIFISLETLSIASYL---LTGYMKRdprsNEAALKYLLIGAASSAIFLYGsslLYGLSGGSTQLSAIALALITSP 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 210 SYPVGLEIIFYIGfLIAFavKSPIIPFHTWLPD------THGEAHYSTCMLLAG----ILLKMGAYGLVRINIELLPRAH 279
Cdd:PRK02504  206 SLGLALALVFVIA-GIAF--KISAVPFHQWTPDvyegspTPVVAFLSVGSKAAGfalaIRLLVTAFPSFDEQWKLLFTAL 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 280 SIFSpwlMIIGSIqiiyaalTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISH------GFIGAALFF 353
Cdd:PRK02504  283 AILS---MVLGNV-------VALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYlfmnlgAFACVILFS 352
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1151119848 354 LAgTGYDRlrllyLDEMGGMAIPMPKIFTIFSIfSMASLA-LPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAI 430
Cdd:PRK02504  353 LR-TGTDQ-----ISDYAGLYQKDPLLTLGLSL-CLLSLGgIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISI 423
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
119-400 1.16e-08

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 57.71  E-value: 1.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 119 LFHFLMLAMysgqigpFSSRDILLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFLLYTAGGSIFLLMGILGI-GLYSS 196
Cdd:MTH00210  119 LFTFLMIVL-------VTSDNYVQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINRVGDIGLVLAMIMIlKEFGT 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 197 NEPTLNFQMLTNRSYPVGLEIIFYIGFLIAFAvKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLvr 269
Cdd:MTH00210  192 LEFSTISSLLVTNINKESLTIICLLLFIGAVG-KSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFLIIRSGPL-- 267
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 270 inIELLPRAHSIfspwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLsdtGLNGAILQIISHGFIGA 349
Cdd:MTH00210  268 --FEGSPLALTI----VTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---NYSTSLFHLMNHAFFKA 338
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1151119848 350 ALFFLAGTGYDRLRllylDE-----MGGMAIPMPKIFTIFSIFSMASLALPGMSGF 400
Cdd:MTH00210  339 LLFLSAGSVIHAVS----DEqdmrkMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
141-442 1.21e-08

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 57.48  E-value: 1.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 141 LLFFIMWELELIPVYLLLSMWGGkkRLYSATKFL---LYTAGGSIFLlmgILGIGLYSSNEPTLNFQ-MLTNRSYPvgle 216
Cdd:MTH00004  138 FQLFIGWEGVGIMSFLLIGWWSG--RAEANTAALqaiIYNRIGDIGL---ILSMAWLAMTLNTWEIQqLFSPTQTP---- 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 217 IIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--IELLPRAHSIfspwLM 287
Cdd:MTH00004  209 TLPLLGLILAATGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRTHplLQNNQTALTI----CL 277
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 288 IIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIgslsdtGLNG---AILQIISHGFIGAALFFLAGTGYDRLRl 364
Cdd:MTH00004  278 CLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNQpqlAFLHISTHAFFKAMLFLCSGSIIHNLN- 350
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 365 lylDE-----MGGMAIPMPkifTIFSIFSMASLALPGM---SGFVAEFIIFFGIITSQkylLMTKILITfvTAIGMILTP 436
Cdd:MTH00004  351 ---NEqdirkMGGLQKTLP---ITSSCLTIGNLALMGTpflSGFYSKDTIIETLNTSY---LNAWALLL--TLLATSFTA 419

                  ....*.
gi 1151119848 437 IYSLSM 442
Cdd:MTH00004  420 AYSLRM 425
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
180-440 7.16e-08

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 54.92  E-value: 7.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 180 GSIFLLMGILGIGLYSsnePTLNFQMLTNRSYPVGLE--IIFYIGF-LIAFAV-KSPIIPFHTWLpDTHGEAHYSTCMLL 255
Cdd:PRK07390  183 GDLLLLMGVVALSPLA---GTLNFSDLAAWAATANLDplTATLLGLaLIAGPTgKCAQFPLHLWL-DEAMEGPNPASILR 258
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 256 AGILLKMGAYGLVRIN--IELLPRAHSIfspwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGsLSDTG 333
Cdd:PRK07390  259 NSVVVATGAWVLIKLQpvLALSPVALTV----LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVG-LQQPD 333
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 334 LngAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITS 413
Cdd:PRK07390  334 I--ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAV 411
                         250       260
                  ....*....|....*....|....*..
gi 1151119848 414 QKYLLMTKILITFVTAIGmiLTPIYSL 440
Cdd:PRK07390  412 SPWLVGVLLLVNALTAFN--LTRVFRL 436
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
96-502 1.29e-07

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 53.88  E-value: 1.29e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848  96 ILLTGFITTLATLAAHPVTRESRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLL 175
Cdd:PRK06277   78 IFVLSLIASLVLITGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMI 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 176 Y-TAGGSIFLLmgilGIGLYSSNEPTLN-----FQMLTNRSYPVgleiiFYIGFL---IAFAVKSPIIPFHTWLPDTHGE 246
Cdd:PRK06277  158 LgNVAGSILLL----GIGFLLASTGTLNitdihNALLVNPTSPV-----IYGGLLlliFGLLYGSGLPPFHTIKSDIYAK 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 247 AH-YSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIG 325
Cdd:PRK06277  229 AKpFGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAG 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 326 IGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAefi 405
Cdd:PRK06277  309 LALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQS--- 385
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 406 iffgiitsqKYLLMTKILITFVT--AIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDSG--PRELFISISILIPV-IG 480
Cdd:PRK06277  386 ---------KLMLAQAAMQANMPelAIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKkvPKYAVFSLAVLTILcII 456
                         410       420
                  ....*....|....*....|..
gi 1151119848 481 IGIYPDFILSFSVDKVEAILSN 502
Cdd:PRK06277  457 LGLFPDLVTNYLYPFANEIGRN 478
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
141-434 1.36e-07

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 53.77  E-value: 1.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 141 LLFFIMWELELIP-VYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILGIGLyssNEPTLNFQMLTNRSYpvGLEIIF 219
Cdd:MTH00062   94 LLFWFFYELSIIPlLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSL---VNGSFNFSDWGSDDS--VSLIVY 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 220 YIGFLIaFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLPRAHSIFSPWLMIIGsiqiIYAAL 299
Cdd:MTH00062  169 YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFS----VFFLI 243
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 300 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYD----RLRLLYLDEMGGMAI 375
Cdd:MTH00062  244 TACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEvsgsRNWVLLKSGINGSLV 323
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 376 PMpkiftIFSIFSMASLA-LPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGMIL 434
Cdd:MTH00062  324 LR-----VIVVFSFLSLCsFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLIL 378
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
136-442 4.42e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 52.60  E-value: 4.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 136 SSRDILLFFIMWELELIPVYLLLSMWGGkkRLYSATKFL---LYTAGGSIFLLMGILGIgLYSSNEPTLNFQMLTNRSyp 212
Cdd:MTH00066  131 TANNLFQLFIGWEGVGIMSFLLIGWWHA--RADANTAALqavLYNRVGDIGLILSMAWL-AMNTNSWELQQIFLLNDN-- 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 213 vglEIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--IELLPRAHSIfs 283
Cdd:MTH00066  206 ---STLPLLGLILAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRFHplLENNQTALTI-- 273
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 284 pwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGsLSDTGLngAILQIISHGFIGAALFFLAGTGYDRLR 363
Cdd:MTH00066  274 --CLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIG-LNQPQL--AFFHICTHAFFKAMLFLCSGSIIHSLN 348
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 364 llylDE-----MGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSqkYLLMTKILITFvtaIGMILTPIY 438
Cdd:MTH00066  349 ----DEqdirkMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTS--NLNSWALILTL---IATSFTAVY 419

                  ....
gi 1151119848 439 SLSM 442
Cdd:MTH00066  420 SFRI 423
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
218-431 6.05e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 51.57  E-value: 6.05e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 218 IFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYG-LVRINIELLprahsifspWLMIIGSIQIIY 296
Cdd:MTH00196   96 IGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSiLVSIGLNVN---------ILLIGGLFSLFV 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 297 AALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTGYDRLRLLYLDEMGGMAIP 376
Cdd:MTH00196  166 GAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSGLSRRLP 245
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1151119848 377 MPKIFTIFSIFSMAslALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIG 431
Cdd:MTH00196  246 ILAITLALTFLSIA--GIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGV 298
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
224-465 8.86e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 51.30  E-value: 8.86e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 224 LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRinieLLPRAHSI--FSPWLMIIGSIQIIYAALTS 301
Cdd:MTH00207  186 MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIR----FYPFLSSTywFNPALLLTASLTMLMAGLSA 261
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 302 LGQRNLKKRIAYSSVSHMGFIiigIGSLSDTGLNGAILQIISHGFIGAALFFLAGTG-YDRLRLLYLDEMGGMAIPMPKI 380
Cdd:MTH00207  262 MTECDMKKIIALSTLSQLGVM---MASLGLGMPKLALFHLITHALFKALLFVCAGSLiHSHHHSQDLRTMGNLTNQMPLT 338
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 381 FTIFSIFSMASLALPGMSGFVA-EFIIFFGIITSQKYLLMtkILITFVTAigmiLTPIYSLSMLRQMFYGyKLFNTPNSY 459
Cdd:MTH00207  339 TSCLLIANLALCGSPFLSGFYSkDLILESSLFYPHNSLMI--LMIFLATA----LTAAYSTRFTLAVLWS-PNSSSPYHH 411

                  ....*.
gi 1151119848 460 FFDSGP 465
Cdd:MTH00207  412 LEDEDK 417
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
225-429 1.76e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 50.40  E-value: 1.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 225 IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYG-LVRINIEllprahsifSPWLMIIGSIQIIYAALTSLG 303
Cdd:MTH00199  198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSiLVQIGPV---------TNVVLICAVLSIIYGAIGALN 267
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 304 QRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTgyDRLRLLYLDEMGGMAIPMPKIFTI 383
Cdd:MTH00199  268 QTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILS--LKLTKGLIVEVSGLSRKNPVIALT 345
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1151119848 384 FSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTA 429
Cdd:MTH00199  346 LALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIA 391
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
203-406 1.98e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 50.11  E-value: 1.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 203 FQMLTNRSYPVGLEIIFYIGFLIAFAVkspiIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRIniellprahsiF 282
Cdd:PRK12664  134 SGQAQNGQYTGYCKLLFMLGLLINCAC----FPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF-----------F 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 283 S--PWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGA--ILQIISHGFIGAALFFLAGTG 358
Cdd:PRK12664  199 SgeEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVAIGilILQIVLSVVYQTLLFMVADSV 278
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1151119848 359 YDRLRLLYLDEMGGM-AIPMPKIFTIFSIFSMAslALPGMSGFVAEFII 406
Cdd:PRK12664  279 INRTRKFNLNRVGGLfKMSLEAMCCIIAILNMG--AFPGTAGFVSKSLI 325
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
122-457 3.46e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 48.90  E-value: 3.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 122 FLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILGIglyssneptl 201
Cdd:MTH00197    2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLS---------- 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 202 nfqmltnrSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLvrinieLLPRAHSI 281
Cdd:MTH00197   72 --------FSNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLI------LAFNSSSF 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 282 FSpwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSlsdtGLNGAILQIISHGFIGAALFFLagtgYDR 361
Cdd:MTH00197  137 MG--LLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVY----SPSIFMLYYLIYFVIMFMLFLF----LSK 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 362 LRLLYLDEMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGMILTPIYSLS 441
Cdd:MTH00197  207 NNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSL 286
                         330
                  ....*....|....*.
gi 1151119848 442 MLRQMFYGYKLFNTPN 457
Cdd:MTH00197  287 ILSNWMINFLMKINLL 302
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
122-463 4.15e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 48.73  E-value: 4.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 122 FLMLaMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILGiglyssneptl 201
Cdd:MTH00144    9 FLFL-MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLI----------- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 202 nfqmltnrSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGI-------LLKMGAYGLVRINIel 274
Cdd:MTH00144   77 --------MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWqkvaplfLLSNFLDLYWLAYL-- 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 275 lprahsifspwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIISHGFIgaaLFFL 354
Cdd:MTH00144  147 -----------LCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSL 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 355 AGTGYDRLRLLYldemGGMAIPMPKIFTIFSIFSMAslALPGMSGFVAEFIIFFGIITsqkyllMTKILITFVTAIGMIL 434
Cdd:MTH00144  213 WSGDSGSMKDLG----SLKPSYKTGLSIISLLLSLG--GLPPFLGFCSKLLVLISSME------SSPLLLILLLLLGSLI 280
                         330       340       350
                  ....*....|....*....|....*....|
gi 1151119848 435 TPIYSLSMLRQMF-YGYKLFNTPNSYFFDS 463
Cdd:MTH00144  281 SLFFYLSVFFSSFlSSSKSKKSNSSKVLNS 310
ND2 MTH00198
NADH dehydrogenase subunit 2; Provisional
220-334 2.46e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214454 [Multi-domain]  Cd Length: 607  Bit Score: 46.78  E-value: 2.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 220 YIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLVRINIellprahsIFSPWLMIIGSIQIIYAAL 299
Cdd:MTH00198  302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLTSLV--------ITSKLLLSVAIISLVVGAF 372
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1151119848 300 TSLGQRNLKKRIAYSSVSHMGFIIIGIGSLSDTGL 334
Cdd:MTH00198  373 GALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESL 407
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
215-480 5.72e-05

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 45.79  E-value: 5.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 215 LEIIFYIGFLIAFA--VKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINIELLprAHSIFSPWLMIIGSI 292
Cdd:MTH00209  171 SNLGSVISVLIVLAamTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF--SSPFFSMSLLLLGSL 248
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 293 QIIYAALTSLGQRNLKKRIAYSSVSHMG--FIIIGIGslsdtGLNGAILQIISHGFIGAALFFLAGTG-YDRLRLLYLDE 369
Cdd:MTH00209  249 TTLMASMSANVESDLKKIIALSTLSQLGlmMCSLGLN-----QPELAFFHLITHALFKALLFICAGNIiHSHGHSQDIRM 323
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 370 MGGMAIPMPKIFTIFSIFSMASLALPGMSGFVAEFIIFFGIITSqKYLLMTKILITFVTAigmiLTPIYSLSMLRQMFYG 449
Cdd:MTH00209  324 VGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLES-NMPIMTLILMFLSTS----LTAAYSMRLSYFSLWG 398
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1151119848 450 YKLFNTPNSYFFDSGprelFISISILIPVIG 480
Cdd:MTH00209  399 PNSSKSLNSSFDQNK----LNLKPMLVLTLG 425
PRK06591 PRK06591
putative monovalent cation/H+ antiporter subunit D; Reviewed
117-322 1.72e-04

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235837 [Multi-domain]  Cd Length: 432  Bit Score: 44.00  E-value: 1.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 117 SRLFHFLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLmgiLGIGLYSS 196
Cdd:PRK06591  114 KSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLIL---IAIGFLLS 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 197 NEPTLNFQMLTNR--SYPVGLEIIFYIGF-LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVR---- 269
Cdd:PRK06591  191 ITGSLNMTDIAAYlqEHTNSRIITIAIGFfLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyi 270
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1151119848 270 -INIELLPRAHSIFspwLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFI 322
Cdd:PRK06591  271 iIGYETIKTAITNF---IRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
180-476 5.23e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 42.44  E-value: 5.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 180 GSIFLLMGILGIGLYSSneptLNFQMLTNRSYPVGLEIIFYIGFLIAFAVKSPIIPFHTWLPdthgEA-----------H 248
Cdd:MTH00165  147 GDVAILLSIAWMMNFGS----WNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLP----AAmaaptpvsalvH 218
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 249 YSTcmllagiLLKMGAYGLVRINIELLpraHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIgIGS 328
Cdd:MTH00165  219 SST-------LVTAGVYLLIRFNNLLF---SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS-ILS 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 329 LSDTGLngAILQIISHGFIGAALFFLAGT------GYDRLRLlyldeMGGMAIPMPKIFTIFSIFSMASLALPGMSGFVA 402
Cdd:MTH00165  288 LGFPKL--AFFHLLTHALFKALLFLCAGSiihnmsNSQDIRF-----MGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYS 360
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1151119848 403 -EFIIffgiitsqKYLLMTKI--LITFVTAIGMILTPIYSLSMlrqMFYGY-KLFNTPNSYFFDSGPRELFISISILI 476
Cdd:MTH00165  361 kDLIL--------EMVSMSNLnfFIFFLFFFSTGLTVSYSFRL---IYYSMsGDFNLKSLNNLSDESKFMLKSMILLL 427
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
224-404 6.90e-04

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 41.99  E-value: 6.90e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 224 LIAFAV--KSPIIPFHTWLPDTHGEAHYSTCMLLAGILlKMGAYGLVRIN--IELLPRAHSIfspwLMIIGSIQIIYAAL 299
Cdd:PRK08168  205 LLVLAVilKTAQLPVHGWLIQVMEAPTPVSALLHAGVV-NLGGFVLIRFAplLEQAPPARWL----LVLVGLATAVLAGL 279
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 300 TSLGQRNLKKRIAYSSVSHMGFIIIGIGslsdTGL-NGAILQIISHGFIGAALFFLAGTGYDRLRLLyldEMGGMAIPMP 378
Cdd:PRK08168  280 VMLTRISIKVRLAWSTVAQMGFMLLECG----LGLyELALLHLVAHSLYKAHAFLSASEAVRDTRLR---RLQGPQSAAG 352
                         170       180
                  ....*....|....*....|....*..
gi 1151119848 379 KIFTIFSIF-SMASLALPGMSGFVAEF 404
Cdd:PRK08168  353 VVSLLLAPLlSAALVLLLQSLLPLGAW 379
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
122-491 7.00e-04

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 41.84  E-value: 7.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 122 FLMLAMYSGQIGPFSSRDILLFFIMWELELIPVYLLLSMWGGKKRLYSATKFLLYTAGGSIFLLMGILgiglyssneptl 201
Cdd:MTH00041    8 FLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGAL------------ 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 202 nFQMLTNRSYPVG--LEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINiellpraH 279
Cdd:MTH00041   76 -IQAWLSGSWSINgpLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-------N 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 280 SIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIgigsLSDTGLNGAILQIISHGFIGAALFFLAgtgy 359
Cdd:MTH00041  148 LLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIII----TSAYSPNASIIMFLIYIIINTSIFLIG---- 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 360 DRLRLLYLDEMGGMAIPMPkIFTIFSIFSMASLA-LPGMSGFVAEFIIFFGIITSQKYLLMTKILITFVTAIGMILTPIY 438
Cdd:MTH00041  220 NNFSLSTLSHLNKLSQLNP-ISAFLFILSILSLGgLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISF 298
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1151119848 439 SLSMLrqMFYGYKLFNTPNSYFFDSGPRELFISISILIPVIGIGIYPDFILSF 491
Cdd:MTH00041  299 NTSLT--LFPQHSISLFSWRNSGNITVYGVILSILSSISILGLLLIPLFLSFL 349
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
221-443 8.74e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 41.76  E-value: 8.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 221 IGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--IELLPRAHSIfspwLMIIGS 291
Cdd:MTH00108  214 MGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGVFL------LIRFHplMENNKTIQTL----TLCLGA 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 292 IQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIgslsdtGLNG---AILQIISHGFIGAALFFLAGTGYDRLRllylD 368
Cdd:MTH00108  283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQphlAFLHICTHAFFKAMLFMCSGSIIHNLN----D 352
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 369 E-----MGGMAIPMPkiFTIFSIFsMASLALPGM---SGFVAEFIIFFGIITSqkYLLMTKILITFvtaIGMILTPIYSL 440
Cdd:MTH00108  353 EqdirkMGGLFKTLP--FTSTALI-IGSLALTGMpflTGFYSKDLIIEAANTS--YTNAWALLITL---IATSLTAAYST 424

                  ...
gi 1151119848 441 SML 443
Cdd:MTH00108  425 RII 427
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
225-425 3.72e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 39.52  E-value: 3.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 225 IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLvrinieLLPRAHSIFSPWLMIIGSIQIIYAALTSLGQ 304
Cdd:MTH00070  100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILS-TWQKLAPMAL------LIQISHLLNSNLLIIMGLLSTLIGGWGGLNQ 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 305 RNLKKRIAYSSVSHMGFIIIGIGSLSDTGLNGAILQIIshgfIGAALFFLagtgydrLRLLYLDEMGGMAIPMPK--IFT 382
Cdd:MTH00070  173 TQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLI----MTSSMFLM-------LMNLNSTNINKLSSSWSKnpTLT 241
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1151119848 383 IFSIFSMASLA-LPGMSGFVAEFIIFFGIITSQKYLLMTKILIT 425
Cdd:MTH00070  242 SMMMLTLLSLGgLPPTTGFIPKWLILQELTKQNLTTLATLMALS 285
ND2 MTH00105
NADH dehydrogenase subunit 2; Provisional
169-324 4.24e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177167 [Multi-domain]  Cd Length: 347  Bit Score: 39.44  E-value: 4.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 169 SATKFLLYTAGGSIFLLMGILgIGLYSSNEPTLnfqmlTNRSYPVGLEIIfyigfLIAFAVKSPIIPFHTWLPD-THGEA 247
Cdd:MTH00105   55 AATKYFLTQATASMLLMMAII-INLMYSGQWTI-----TKLTNPTASTLM-----TIALAMKLGLAPFHFWVPEvTQGIP 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 248 HYSTCMLLA-------GILLKMgayglvriniellprAHSIFSPWLMIIGSIQIIYAALTSLGQRNLKKRIAYSSVSHMG 320
Cdd:MTH00105  124 LSSGMILLTwqklaplSILYQI---------------SPSINPNLLLTLAILSILIGGWGGLNQTQLRKILAYSSIAHMG 188

                  ....
gi 1151119848 321 FIII 324
Cdd:MTH00105  189 WMTA 192
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
221-404 6.65e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 39.04  E-value: 6.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 221 IGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--IELLPRAHSIfspwLMIIGS 291
Cdd:MTH00137  219 LGLILAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRLSplMENNQTALTT----CLCLGA 287
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151119848 292 IQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGslsdtgLNG---AILQIISHGFIGAALFFLAGTGYDRLRllylD 368
Cdd:MTH00137  288 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIG------LNQpqlAFLHICTHAFFKAMLFLCSGSIIHSLN----D 357
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1151119848 369 E-----MGGMAIPMPkiFTIfSIFSMASLALPGMSgFVAEF 404
Cdd:MTH00137  358 EqdirkMGGLHHLTP--FTS-SCLTIGSLALTGTP-FLAGF 394
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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