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Conserved domains on  [gi|1150151010|ref|YP_009349984|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Homogryllacris anelytra]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 10-174 5.54e-30

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 107.20  E-value: 5.54e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  10 NIFTTFMFIQCNHPLSMTLIIILQTLLICTFTGMISQSFWFSYILFLVFLGGMLVLFIYITSLASNEMFSIPTTTIFSCM 89
Cdd:MTH00166    8 LLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSLKLLILFL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  90 IIMMFIILLSwsldstfptlitnNLDMNSTNLTSTNYWTETTLPLIKLYNNPTNLNTLMLMLYLFLTLIAIVKITNIFHG 169
Cdd:MTH00166   88 LMLLLMLNNF-------------IKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1150151010 170 PLRSM 174
Cdd:MTH00166  155 PLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 10-174 5.54e-30

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 107.20  E-value: 5.54e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  10 NIFTTFMFIQCNHPLSMTLIIILQTLLICTFTGMISQSFWFSYILFLVFLGGMLVLFIYITSLASNEMFSIPTTTIFSCM 89
Cdd:MTH00166    8 LLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSLKLLILFL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  90 IIMMFIILLSwsldstfptlitnNLDMNSTNLTSTNYWTETTLPLIKLYNNPTNLNTLMLMLYLFLTLIAIVKITNIFHG 169
Cdd:MTH00166   88 LMLLLMLNNF-------------IKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1150151010 170 PLRSM 174
Cdd:MTH00166  155 PLRSK 159
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 10-174 5.54e-30

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 107.20  E-value: 5.54e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  10 NIFTTFMFIQCNHPLSMTLIIILQTLLICTFTGMISQSFWFSYILFLVFLGGMLVLFIYITSLASNEMFSIPTTTIFSCM 89
Cdd:MTH00166    8 LLILSIIFLFLNHPLSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFSLKLLILFL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  90 IIMMFIILLSwsldstfptlitnNLDMNSTNLTSTNYWTETTLPLIKLYNNPTNLNTLMLMLYLFLTLIAIVKITNIFHG 169
Cdd:MTH00166   88 LMLLLMLNNF-------------IKNSEMSNFNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*
gi 1150151010 170 PLRSM 174
Cdd:MTH00166  155 PLRSK 159
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 14-172 9.03e-09

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 51.93  E-value: 9.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  14 TFMFIQCNHPLSMTLIIILQTLLICTFTGMISQSfWFSYILFLVFLGGMLVLFIYITSLASNEMFSIPTTTIFSCMIIMM 93
Cdd:MTH00212   14 MLLFPLSAHPLTLGVSLLLSSLLSCLIITMESNS-WYGYILFLIYIGGLLVLFGYMVALSPNEHLFFKKYFKGFGMILIS 92

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1150151010  94 FIILLSWSLDSTFPTLITNNLDMNSTnltstnywtettlpLIKLYNNPTNLNTLMLMLYLFLTLIAIVKITNIFHGPLR 172
Cdd:MTH00212   93 LNLYLLLMTLGSSNFSPMLNLKLELN--------------VSKILSNNNIPILLFLGLILLIALLMVVKICQYYKGPLR 157
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 15-172 1.41e-07

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 48.73  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151010  15 FMFIQCNHPLSMTLIIILQTLLICTFTGMISqSFWFSYILFLVFLGGMLVLFIYITSLASNEMFSIPTTTIFSCMIIMMF 94
Cdd:MTH00152   15 LLLPLSKQPLSLGLVLLLLSLFVCVEIGLTL-SSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNFKFVFFSLTLFGF 93

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150151010  95 IILLSWSLDSTFPTLITNNLDMNSTNLTSTNYWTETTLPLIKLYnnptnlntLMLMLYLFLTLIAIVKITNIFHGPLR 172
Cdd:MTH00152   94 LGLFFFFLYLYSSGGLSLSSLFDGSSGSLSFGGGLYSSSGWSIF--------VFLAVLLLIVMVSVVKICYYEEGSLR 163
ND6 MTH00138
NADH dehydrogenase subunit 6; Provisional
 47-74 3.51e-04

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 177196  Cd Length: 173  Bit Score: 39.35  E-value: 3.51e-04
                          10        20
                  ....*....|....*....|....*...
gi 1150151010  47 SFwFSYILFLVFLGGMLVLFIYITSLAS 74
Cdd:MTH00138   49 SF-LSLVLFLIYLGGMLVVFAYSAALAA 75
ND6 MTH00065
NADH dehydrogenase subunit 6; Provisional
 51-73 4.22e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214415  Cd Length: 172  Bit Score: 35.98  E-value: 4.22e-03
                          10        20
                  ....*....|....*....|...
gi 1150151010  51 SYILFLVFLGGMLVLFIYITSLA 73
Cdd:MTH00065   52 SLVLFLIYLGGMLVVFAYSAALA 74
ND6 MTH00115
NADH dehydrogenase subunit 6; Provisional
 49-74 6.80e-03

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214424  Cd Length: 174  Bit Score: 35.49  E-value: 6.80e-03
                          10        20
                  ....*....|....*....|....*.
gi 1150151010  49 WFSYILFLVFLGGMLVLFIYITSLAS 74
Cdd:MTH00115   50 FVSLVLFLVYLGGMLVVFAYSVSLAA 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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