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Conserved domains on  [gi|1150151009|ref|YP_009349983|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Homogryllacris anelytra]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 3.61e-21

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 79.43  E-value: 3.61e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009  3 MCYFVVMVFMFMMGAFIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1150151009 83 THGNDFFQS 91
Cdd:MTH00162  81 SHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 3.61e-21

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 79.43  E-value: 3.61e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009  3 MCYFVVMVFMFMMGAFIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1150151009 83 THGNDFFQS 91
Cdd:MTH00162  81 SHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
24-97 7.29e-08

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 46.02  E-value: 7.29e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVL--VMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:pfam00420 20 RRNLLRVLLSLELMLNavNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLLKG 95
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-91 3.61e-21

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 79.43  E-value: 3.61e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009  3 MCYFVVMVFMFMMGAFIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIR 82
Cdd:MTH00162   1 MMMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIR 80


                 ....*....
gi 1150151009 83 THGNDFFQS 91
Cdd:MTH00162  81 SHGNDYFSS 89
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 24-97 5.97e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 56.39  E-value: 5.97e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSM--VFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:MTH00125  23 RTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMpiILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-97 2.02e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 54.98  E-value: 2.02e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009  1 MLMCYFVVMVFMFMMGAFIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSM 80
Cdd:MTH00188   1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                         90
                 ....*....|....*..
gi 1150151009 81 IRTHGNDFFQSFVILQC 97
Cdd:MTH00188  81 IRSHGSDYVSSLNLIKC 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 2.73e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 54.59  E-value: 2.73e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFS--MVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 24-97 5.23e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 51.53  E-value: 5.23e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFS--MVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 16-97 8.07e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 51.00  E-value: 8.07e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009 16 GAFIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVIL 95
Cdd:MTH00149  16 GVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSSLSSL 95


                 ..
gi 1150151009 96 QC 97
Cdd:MTH00149  96 KF 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
24-97 7.29e-08

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 46.02  E-value: 7.29e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVL--VMFMMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:pfam00420 20 RRNLLRVLLSLELMLNavNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLLKG 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 20-95 4.13e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 43.78  E-value: 4.13e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150151009 20 FCSKRKHLLVVLLSLEFMVLVMF--MMLFMYLNMFNYELFFSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVIL 95
Cdd:MTH00181  16 LSLYKTHLLSLLLCLEGMMLFLFllLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTHGSDHLLKFNLL 93
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 24-97 5.89e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 43.77  E-value: 5.89e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 24 RKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELFFSM--VFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQC 97
Cdd:MTH00107  23 RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMpiILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 23-96 8.29e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 40.67  E-value: 8.29e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150151009 23 KRKHLLVVLLSLEFMVLVMFMMLFMYLNMFNYELF--FSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQ 96
Cdd:MTH00043  22 NRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNHNSDLVASLNLLQ 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 18-97 2.21e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 39.35  E-value: 2.21e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151009 18 FIFCSKRKHLLVVLLSLEFMVLVMFMMLFMYL-NMFNYELFFSMVFLVFSVCEGVLGLSILVSMIRTHGNDFFQSFVILQ 96
Cdd:MTH00013  17 FNLSLQRKHLLMSLLSLEAMILSLALFIPLSLmFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKSLTSNK 96


                 .
gi 1150151009 97 C 97
Cdd:MTH00013  97 C 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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