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Conserved domains on  [gi|1150151006|ref|YP_009349980|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Homogryllacris anelytra]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.45e-44

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 140.30  E-value: 1.45e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   3 MMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQ 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1150151006  83 WSNLLSWTITTMTFLIILLVGLYHEWNQGALDW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.45e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 140.30  E-value: 1.45e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   3 MMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQ 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1150151006  83 WSNLLSWTITTMTFLIILLVGLYHEWNQGALDW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 1.99e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.04  E-value: 1.99e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQwSNLLSWTITTMTFLIILLVGLYHEWNQG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1150151006 112 ALD 114
Cdd:pfam00507  92 ALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 1.01e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 1.01e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILqwsNLLSWT--ITTMTFLIILLVGLYHEWN 109
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF---RELGWFglIEMLVFIAILLVGLIYAWK 111


                  ....*.
gi 1150151006 110 QGALDW 115
Cdd:COG0838   112 KGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.45e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 140.30  E-value: 1.45e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   3 MMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQ 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1150151006  83 WSNLLSWTITTMTFLIILLVGLYHEWNQGALDW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 3.32e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 134.60  E-value: 3.32e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   1 MLMMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1150151006  81 LQWSNLLSWTITTMTFLIILLVGLYHEWNQGALDWAH 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 9.66e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 128.57  E-value: 9.66e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   1 MLMMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1150151006  81 LQWSNLLSWTITTMTFLIILLVGLYHEWNQGALDWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 6.05e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 111.10  E-value: 6.05e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   1 MLMMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1150151006  81 LQWSNLLSWTITTMTFLIILLVGLYHEWNQGALDWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-116 9.40e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 103.08  E-value: 9.40e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPiiviLQWSNLLSWTITT----MTFLIILLVGLYHE 107
Cdd:MTH00136   31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP----LPWGDQLPSPLLTffwaTAVLILLTLGLIYE 106


                  ....*....
gi 1150151006 108 WNQGALDWA 116
Cdd:MTH00136  107 WLQGGLEWA 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 1.59e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 102.33  E-value: 1.59e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  34 EKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWTITTMTFLIILLVGLYHEWNQGAL 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 1150151006 114 DWA 116
Cdd:MTH00106  112 EWT 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 3.23e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 101.60  E-value: 3.23e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   1 MLMMLMLTVIILTICIIIMLLATFLSKKSInDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1150151006  81 LQWSNLLSWTITTMTFLIILLVGLYHEWNQGALDWA 116
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 1.99e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.04  E-value: 1.99e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQwSNLLSWTITTMTFLIILLVGLYHEWNQG 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1150151006 112 ALD 114
Cdd:pfam00507  92 ALE 94
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-116 3.03e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 99.18  E-value: 3.03e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   3 MMLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQ 82
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1150151006  83 WSNLLSWTITTMTFLIILLVGLYHEWNQGALDWA 116
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-116 7.39e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 95.83  E-value: 7.39e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   4 MLMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQW 83
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1150151006  84 SNLLSWTITTMTFLIILLVGLYHEWNQGALDWA 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-115 2.11e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 94.58  E-value: 2.11e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   5 LMLTVIILTICIIIMLLATFLSKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIvilqWS 84
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLP----WS 79

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1150151006  85 NLLSWTITTM--TFLIILLVGLYHEWNQGALDW 115
Cdd:MTH00203   80 NQLSSLSLLLafLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 1.01e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 87.87  E-value: 1.01e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILqwsNLLSWT--ITTMTFLIILLVGLYHEWN 109
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF---RELGWFglIEMLVFIAILLVGLIYAWK 111


                  ....*.
gi 1150151006 110 QGALDW 115
Cdd:COG0838   112 KGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-116 2.21e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.84  E-value: 2.21e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWtITTMTFLIILLVGLYHEWNQG 111
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGF-VEAMIFILVLLVGLVYLWRKG 116


                  ....*
gi 1150151006 112 ALDWA 116
Cdd:PRK06602  117 ALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 2.61e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 81.68  E-value: 2.61e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSwTITTMTFLIILLVGLYHEWNQG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFG-FWVMYLFLIILTIGLIYEWVKG 113


                  ....
gi 1150151006 112 ALDW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 24-115 3.50e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.25  E-value: 3.50e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  24 FLSKKSiNDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLS-WTIttMTFLIILLV 102
Cdd:MTH00018   23 FLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGfWTM--VGFLFILTL 99

                          90
                  ....*....|...
gi 1150151006 103 GLYHEWNQGALDW 115
Cdd:MTH00018  100 GLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 5.85e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 73.43  E-value: 5.85e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWTItTMTFLIILLVGLYHEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWI-VYTFLIVLAIGLAYEWIKG 118


                  ....
gi 1150151006 112 ALDW 115
Cdd:MTH00030  119 GLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-115 7.28e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 57.30  E-value: 7.28e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  34 EKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWtITTMTFLIILLVGLYHEWNQGAL 113
Cdd:CHL00022   39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAF-IEALIFVLILIVGLVYAWRKGAL 117


                  ..
gi 1150151006 114 DW 115
Cdd:CHL00022  118 EW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 1.17e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 49.36  E-value: 1.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSwTITTMTFLIILLVGLYHEWNQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA-LIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1150151006 112 ALDW 115
Cdd:PRK07756  118 VLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
22-115 2.48e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 48.51  E-value: 2.48e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  22 ATFLSKKSIN-DRE--KSSPFECGFDP-KSSARLpfSLRFFLIAVIFLIFDVEIALLLPIIVILQwsnLLSW--TITTMT 95
Cdd:PRK08489   31 ARFISRKLAQkNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFK---LLGLfgLIEMLL 105

                          90       100
                  ....*....|....*....|
gi 1150151006  96 FLIILLVGLYHEWNQGALDW 115
Cdd:PRK08489  106 FIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 1.11e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.59  E-value: 1.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLP--FSLRFFLIAVIFLIFDVEIALLLPIIVilQWSNLLSWTITTMT-FLIILLVGLYHEW 108
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAV--SFDALGVFGLVEMAlFMLTVFVAYAYVW 111


                  ....*..
gi 1150151006 109 NQGALDW 115
Cdd:PRK07928  112 RRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 4.85e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.88  E-value: 4.85e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006   1 MLMMLMLTVIILTICIIIMLLATFLSKKSiNDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVi 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLV- 78

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1150151006  81 lqwsNLLSWTITTMTFLIILLVGLYHEWNQGALDW 115
Cdd:MTH00092   79 ----SDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 26-115 1.45e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 41.04  E-value: 1.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  26 SKKSINDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWtitTMTFLIILLVGLY 105
Cdd:MTH00060   28 NKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWY---YYFFLLLLFLGFV 104

                          90
                  ....*....|
gi 1150151006 106 HEWNQGALDW 115
Cdd:MTH00060  105 VELFSGYVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 2.33e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 38.25  E-value: 2.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150151006  32 DREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIVILQWSNLLSWtITTMTFLIILLVGLYHEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1150151006 112 ALDW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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