|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
1.91e-101 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 293.23 E-value: 1.91e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDPTTSvMNLSLNWLSTFLGLLMLPLLFWLIPSRITVTWYTIIHSLHTEFKTLIGPTaHNGSTFIFISLFSL 80
Cdd:MTH00157 1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 81 ILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAV 160
Cdd:MTH00157 79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1150150819 161 RLAANMIAGHLLLTLLGNTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-225 |
2.62e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 158.14 E-value: 2.62e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 5 LFSIFDPTTSVM-NLSLNWLSTFLGLLMLPLLFWL----IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFiSLFS 79
Cdd:TIGR01131 1 LFSQFDISPITLfSLTLLSLILLLSLLIFLISSSLsrwlIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 80 LILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLA 159
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150150819 160 VRLAANMIAGHLLLTLLGNTGPSLV-ISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
73-222 |
1.16e-43 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 143.69 E-value: 1.16e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 73 IFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNI 152
Cdd:cd00310 7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSS 222
Cdd:cd00310 87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
39-222 |
5.40e-27 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 102.95 E-value: 5.40e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFISLFSLILFNNFLGLF---PYIFTSSSHLSMTLTLALPLWLSFM 115
Cdd:pfam00119 26 VPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVH 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 116 LYGWINH-TTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMS---IL 191
Cdd:pfam00119 106 YYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLlgvIP 185
|
170 180 190
....*....|....*....|....*....|.
gi 1150150819 192 LIAQMLLMTLESAVAIIQSYVFAILATLYSS 222
Cdd:pfam00119 186 PLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
39-220 |
1.83e-22 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 90.90 E-value: 1.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFiSLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYG 118
Cdd:COG0356 27 VPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 119 WINH-TTHMFAHMVPQGTPPiLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMSILLiaQML 197
Cdd:COG0356 106 IKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVA 182
|
170 180
....*....|....*....|...
gi 1150150819 198 LMTLESAVAIIQSYVFAILATLY 220
Cdd:COG0356 183 WTAFELLVGFLQAYIFTMLTAVY 205
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
1.91e-101 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 293.23 E-value: 1.91e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDPTTSvMNLSLNWLSTFLGLLMLPLLFWLIPSRITVTWYTIIHSLHTEFKTLIGPTaHNGSTFIFISLFSL 80
Cdd:MTH00157 1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 81 ILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAV 160
Cdd:MTH00157 79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1150150819 161 RLAANMIAGHLLLTLLGNTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-225 |
2.62e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 158.14 E-value: 2.62e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 5 LFSIFDPTTSVM-NLSLNWLSTFLGLLMLPLLFWL----IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFiSLFS 79
Cdd:TIGR01131 1 LFSQFDISPITLfSLTLLSLILLLSLLIFLISSSLsrwlIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 80 LILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLA 159
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150150819 160 VRLAANMIAGHLLLTLLGNTGPSLV-ISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
1.99e-47 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 155.96 E-value: 1.99e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDPTTSVM--NLSLNWLSTFLGLLMLPLLFWLIPSRITVTWYTIiHSLHTEFKTLIGPTAHNGSTFIFISLF 78
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMF-STFLPEMILRSNGSYILGSASIIISLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 79 SLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTL 158
Cdd:MTH00176 80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1150150819 159 AVRLAANMIAGHLLLTLLGNTGPSLVIST---MSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSEV 224
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSpliGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
73-222 |
1.16e-43 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 143.69 E-value: 1.16e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 73 IFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNI 152
Cdd:cd00310 7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSS 222
Cdd:cd00310 87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
73-223 |
3.66e-36 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 126.86 E-value: 3.66e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 73 IFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNI 152
Cdd:MTH00120 72 ILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLL 151
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150150819 153 IRPGTLAVRLAANMIAGH-------LLLTLLGNTGPSLVISTMSILLiaqmLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00120 152 IRPLALGVRLTANLTAGHlliqlisTATLNLLPTMPTLSLLTLIILL----LLTILELAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
8.64e-36 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 125.83 E-value: 8.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDpTTSVMNLSLNWLSTFLG-LLMLPLLFWLIPSRITVTWYTIIHSLHTEFKTLIGPTAHNGStFIFISLFS 79
Cdd:MTH00179 1 MMLSMFDQFE-SPSLLGIPLLALALLLPwLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 80 LILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLA 159
Cdd:MTH00179 79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1150150819 160 VRLAANMIAGHLLLTLLGnTGPSLVISTMSIL----LIAQMLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00179 159 VRLTANITAGHLLMHLIS-SAVFVLMNFMGMValltLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
1.71e-35 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 125.23 E-value: 1.71e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDPTTSVMNLSLN----WLSTFLGLLMLPLLFWLIPSRITVTWYTIIHSLHTEFKTLIGpTAHNGSTFIFIS 76
Cdd:MTH00005 1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 77 LFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPG 156
Cdd:MTH00005 80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 157 TLAVRLAANMIAGHLLLTLLGNTGPSLV---ISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIYAASALfssISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
1.49e-34 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 122.67 E-value: 1.49e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 1 MMNNLFSIFDPTTSVMNL--SLNWLSTFLGLLMLPLLFWLIPSRITVTWYTIIHSLHTEFKTLIGpTAHNGSTFIFISLF 78
Cdd:MTH00173 1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 79 SLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTL 158
Cdd:MTH00173 80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1150150819 159 AVRLAANMIAGHLLLTLLGNTGPSLVISTMS----ILLIAQMLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
3-223 |
2.12e-33 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 119.69 E-value: 2.12e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 3 NNLFSIFDPTTsVMNLSLNWLSTFLGLLMLPLLFWL--IPSRITVTWYTIIHSLhteFKTLIGPTAHNGSTFI--FISLF 78
Cdd:MTH00035 5 NSIFGQFSPDT-ILFIPLTLLSSVIALSWLFFINPTnwLPSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTVF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 79 SLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTL 158
Cdd:MTH00035 81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1150150819 159 AVRLAANMIAGHLLLTLLGNTGPSLVISTM--SILLIAQMLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00035 161 GLRLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
73-223 |
8.68e-33 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 118.05 E-value: 8.68e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 73 IFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNI 152
Cdd:MTH00132 72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1150150819 153 IRPGTLAVRLAANMIAGHLLLTLLGNTGPSL--VISTMSILLIAQMLLMT-LESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00132 152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlpLMPTVAILTATLLFLLTlLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
54-223 |
2.58e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 116.99 E-value: 2.58e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 54 LHTEFKTLIGPTAHNGS--TFIFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMV 131
Cdd:MTH00073 51 LQNFTKQLMLPLNTPGHkwALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 132 PQGTPPILMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGN-------TGPSLVISTMSILLiaqmLLMTLESA 204
Cdd:MTH00073 131 PEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTatlvllpLMPTVSILTMIVLF----LLTLLEIA 206
|
170
....*....|....*....
gi 1150150819 205 VAIIQSYVFAILATLYSSE 223
Cdd:MTH00073 207 VAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
77-220 |
1.72e-31 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 114.66 E-value: 1.72e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 77 LFSLILF---NNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNII 153
Cdd:MTH00101 72 LMSLILFigsTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFI 151
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 154 RPGTLAVRLAANMIAGHLLLTLLGNTGPSLV---ISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLY 220
Cdd:MTH00101 152 QPMALAVRLTANITAGHLLIHLIGGATLALMsisTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
39-222 |
5.40e-27 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 102.95 E-value: 5.40e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFISLFSLILFNNFLGLF---PYIFTSSSHLSMTLTLALPLWLSFM 115
Cdd:pfam00119 26 VPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVH 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 116 LYGWINH-TTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMS---IL 191
Cdd:pfam00119 106 YYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLlgvIP 185
|
170 180 190
....*....|....*....|....*....|.
gi 1150150819 192 LIAQMLLMTLESAVAIIQSYVFAILATLYSS 222
Cdd:pfam00119 186 PLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
39-220 |
1.23e-25 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 99.73 E-value: 1.23e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRitvtWYTIIHSLHTEFKTLIGPTAHNGSTFIF---ISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFM 115
Cdd:MTH00172 41 IPKR----WQSIIEIIYNHFHGVVKDNLGNEGLKYFpfiISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVT 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 116 LYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTM--SILLI 193
Cdd:MTH00172 117 LAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGflSLFPL 196
|
170 180
....*....|....*....|....*...
gi 1150150819 194 AQMLLMT-LESAVAIIQSYVFAILATLY 220
Cdd:MTH00172 197 LIMVFITlLEIAVAVIQAYVFCLLTTIY 224
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
75-220 |
3.17e-23 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 93.53 E-value: 3.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 75 ISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIR 154
Cdd:MTH00175 87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 155 PGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMSILLIAQMLLMT----LESAVAIIQSYVFAILATLY 220
Cdd:MTH00175 167 AISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
39-220 |
1.83e-22 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 90.90 E-value: 1.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIFiSLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYG 118
Cdd:COG0356 27 VPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 119 WINH-TTHMFAHMVPQGTPPiLMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTMSILLiaQML 197
Cdd:COG0356 106 IKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVA 182
|
170 180
....*....|....*....|...
gi 1150150819 198 LMTLESAVAIIQSYVFAILATLY 220
Cdd:COG0356 183 WTAFELLVGFLQAYIFTMLTAVY 205
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
39-220 |
7.66e-19 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 81.91 E-value: 7.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 39 IPSRITVTWYTIIHSLHTEFKTLIGPTAHNGSTFIfISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYG 118
Cdd:MTH00174 60 VPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 119 WINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLVISTM---SILLIAQ 195
Cdd:MTH00174 139 LITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGIligSFVPFAI 218
|
170 180
....*....|....*....|....*.
gi 1150150819 196 MLLMT-LESAVAIIQSYVFAILATLY 220
Cdd:MTH00174 219 LIFVTiLEMAVAIIQAYVFTLLTIVY 244
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
73-220 |
1.09e-17 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 78.30 E-value: 1.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 73 IFISLFSLILFNNFLGLFP-YIFTSSSHLSMTLTLALPLWLSFMLYG-WINHTTHMFAHMVPQgtppiLMPFMVCIETIS 150
Cdd:PRK05815 75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 151 NIIRPGTLAVRLAANMIAGHLLLTLLGnTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
75-220 |
1.33e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 59.76 E-value: 1.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 75 ISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWL-----SFMLYGWINHTTHMFAhmvpqGTPPILMPFMVCIETI 149
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFitqyaAIKAHGIKGYLAHLTG-----GTHWSLWIIMIPIEFI 249
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1150150819 150 SNIIRPGTLAVRLAANMIAGHLLLTLLgnTGPSLVISTMsILLIAQMLLMT-----LESAVAIIQSYVFAILATLY 220
Cdd:PRK13419 250 GLFTKPFALTVRLFANMTAGHIVILSL--IFISFILKSY-IVAVAVSVPFAifiylLELFVAFLQAYIFTMLSALF 322
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
70-223 |
6.50e-08 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 51.13 E-value: 6.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 70 STFIFISLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYGWINhtTHMFAHMVPQGTPPILMPF-MVCIET 148
Cdd:MTH00087 51 SSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEI 128
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1150150819 149 ISNIIRPGTLAVRLAANMIAGHLLLtllgntgpSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLYSSE 223
Cdd:MTH00087 129 VSELSRPLALTLRLTVNLMVGHLIS--------SLLNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
95-220 |
1.84e-07 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 50.66 E-value: 1.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 95 TSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETI-SNIIRPGTLAVRLAANMIAGHLLL 173
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1150150819 174 T-LLGNTGPSLVISTMSILLIAQMLLMTLESAVAIIQSYVFAILATLY 220
Cdd:PRK13417 297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
|
|
| PRK13420 |
PRK13420 |
F0F1 ATP synthase subunit A; Provisional |
40-220 |
2.74e-06 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237382 [Multi-domain] Cd Length: 226 Bit Score: 46.66 E-value: 2.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 40 PSRITVTWYTIIHSLHTEFKTLIgpTAHNGSTFIFI-SLFSLILFNNFLGLFPYIFTSSSHLSMTLTLALPLWLSFMLYG 118
Cdd:PRK13420 45 PGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 119 -----WINHTTHmfaHMVPQgtpPILMPFMVcietISNIIRPGTLAVRLAANMIaghllltllgntgpSLVISTMSILLI 193
Cdd:PRK13420 123 iraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGNIM--------------SLELAALLVLLV 178
|
170 180 190
....*....|....*....|....*....|.
gi 1150150819 194 AQML----LMTLESAVAIIQSYVFAILATLY 220
Cdd:PRK13420 179 AGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
80-169 |
5.48e-05 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 42.18 E-value: 5.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150819 80 LILFNNFLGL-FPYIFTSSSHLSMTLTLALPLWLSFMLYGWINHTTHMFAHMVPQGTPPILMPFMVCIETISNIIRPGTL 158
Cdd:MTH00050 31 FIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVL 110
|
90
....*....|.
gi 1150150819 159 AVRLAANMIAG 169
Cdd:MTH00050 111 ILRPFINISLG 121
|
|
|