NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1150150799|ref|YP_009349811|]
View 

NADH dehydrogenase subunit 3 (mitochondrion) [Loxoblemmus doenitzi]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 32-115 1.19e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 125.66  E-value: 1.19e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00161   30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00161  110 ALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 32-115 1.19e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 125.66  E-value: 1.19e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00161   30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00161  110 ALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 4.90e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.57  E-value: 4.90e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMP-AMIIQNtsNSYTWMMTMTFFIVILLLGLYHEWNQ 110
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwAVSFRE--LGWFGFVEMLIFIAILLVGLVYAWKK 90


                  ....
gi 1150150799 111 GALQ 114
Cdd:pfam00507  91 GALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 2.98e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.71  E-value: 2.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILLLGLYHEWNQG 111
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1150150799 112 ALQW 115
Cdd:COG0838   114 ALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 32-115 1.19e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 125.66  E-value: 1.19e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00161   30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00161  110 ALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 32-117 7.16e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 123.81  E-value: 7.16e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPamIIQNTSNSYT-WMMTMTF-FIVILLLGLYHEWN 109
Cdd:MTH00148   32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFP--VLQSLGSSFSvWSLTSLFiFLLILILGLFHEWN 109


                  ....*...
gi 1150150799 110 QGALQWAE 117
Cdd:MTH00148  110 EGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 1.22e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 115.47  E-value: 1.22e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799   1 MLLIITTSMLIMLLTLIILMLSLSLSKKSILDREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1150150799  81 QNTSNSYTWMMTMTFFIVILLLGLYHEWNQGALQWAE 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 32-116 4.66e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 109.18  E-value: 4.66e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00012   32 DREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREG 111


                  ....*
gi 1150150799 112 ALQWA 116
Cdd:MTH00012  112 SLDWS 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 1.03e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 103.14  E-value: 1.03e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00042   31 DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNG 110


                  ....*.
gi 1150150799 112 ALQWAE 117
Cdd:MTH00042  111 GLEWAE 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-117 7.08e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 100.76  E-value: 7.08e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMP-AMIIQNTSNSYTWMMTMTfFIVILLLGLYHEWNQ 110
Cdd:MTH00136   31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPlPWGDQLPSPLLTFFWATA-VLILLTLGLIYEWLQ 109


                  ....*..
gi 1150150799 111 GALQWAE 117
Cdd:MTH00136  110 GGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-117 7.16e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 98.09  E-value: 7.16e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  34 EKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILL-LGLYHEWNQGA 112
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNT-MLTMALLLISLLaLSLAYEWTQKG 110


                  ....*
gi 1150150799 113 LQWAE 117
Cdd:MTH00106  111 LEWTE 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 32-117 4.15e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 96.22  E-value: 4.15e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMP---AMIIQNTSNSYTWMMTmtffIVILL-LGLYHE 107
Cdd:MTH00069   29 DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPtpwASQLNTPTNTLFWSTL----ILILLtLGLIYE 104

                          90
                  ....*....|
gi 1150150799 108 WNQGALQWAE 117
Cdd:MTH00069  105 WIQGGLEWAE 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 4.90e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.57  E-value: 4.90e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMP-AMIIQNtsNSYTWMMTMTFFIVILLLGLYHEWNQ 110
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwAVSFRE--LGWFGFVEMLIFIAILLVGLVYAWKK 90


                  ....
gi 1150150799 111 GALQ 114
Cdd:pfam00507  91 GALE 94
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 32-116 7.49e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 95.72  E-value: 7.49e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00113   30 DNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLGLIYEWLQG 109


                  ....*
gi 1150150799 112 ALQWA 116
Cdd:MTH00113  110 GLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 32-115 2.13e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 94.58  E-value: 2.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMmtMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00203   31 DGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLL--AFLFLILLTLGLIYEWLQG 108


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00203  109 GLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 2.98e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.71  E-value: 2.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILLLGLYHEWNQG 111
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFG-LIEMLVFIAILLVGLIYAWKKG 113


                  ....
gi 1150150799 112 ALQW 115
Cdd:COG0838   114 ALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-116 4.44e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 83.76  E-value: 4.44e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSnSYTWMMTMTFFIVILLLGLYHEWNQG 111
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI-GWLGFVEAMIFILVLLVGLVYLWRKG 116


                  ....*
gi 1150150799 112 ALQWA 116
Cdd:PRK06602  117 ALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.97e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 79.37  E-value: 1.97e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSY-TWmmTMTFFIVILLLGLYHEWNQ 110
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFW--VMYLFLIILTIGLIYEWVK 112


                  ....*
gi 1150150799 111 GALQW 115
Cdd:MTH00055  113 GGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-115 2.53e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 78.95  E-value: 2.53e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWmMTMTFFIVILLLGLYHEWNQG 111
Cdd:MTH00018   30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGF-WTMVGFLFILTLGLIYEWIKG 108


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00018  109 GLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 2.66e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.50  E-value: 2.66e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMTMTfFIVILLLGLYHEWNQG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKG 118


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00030  119 GLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 1.98e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.98  E-value: 1.98e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILLLGLYHEWNQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFA-LIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1150150799 112 ALQW 115
Cdd:PRK07756  118 VLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
35-115 8.61e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 46.97  E-value: 8.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  35 KNSPFECGFDP-KSSARLpfSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILLLGLYHEWNQGAL 113
Cdd:PRK08489   47 KLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLGLFG-LIEMLLFIVLLTIGFIYAWKKGAL 123


                  ..
gi 1150150799 114 QW 115
Cdd:PRK08489  124 EW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 1.78e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.20  E-value: 1.78e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLP--FSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTwMMTMTFFIVILLLGLYHEWN 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFG-LVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1150150799 110 QGALQW 115
Cdd:PRK07928  113 RGGLEW 118
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 32-115 4.80e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.50  E-value: 4.80e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  32 DREKNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMMtmtFFIVILLLGLYHEWNQG 111
Cdd:MTH00060   34 GFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWYYY---FFLLLLFLGFVVELFSG 110


                  ....
gi 1150150799 112 ALQW 115
Cdd:MTH00060  111 YVRW 114
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 35-115 1.69e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.95  E-value: 1.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1150150799  35 KNSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALIMPAMIIQNTSNSYTWMmtmtfFIVILLLGLYHEWNQGALQ 114
Cdd:MTH00092   34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISFFM-----LMIFIFFGFYMEWWYGKLI 108


                  .
gi 1150150799 115 W 115
Cdd:MTH00092  109 W 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH