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Conserved domains on  [gi|114690505|ref|XP_001136508|]
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fetal and adult testis-expressed transcript protein [Pan troglodytes]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Miff super family cl05292
Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and ...
 119-182 2.12e-06

Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and peroxisomal fission.


The actual alignment was detected with superfamily member pfam05644:

Pssm-ID: 461701  Cd Length: 292  Bit Score: 46.75  E-value: 2.12e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114690505  119 DAVAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLWMN 182
Cdd:pfam05644 228 DSTLDLTPDDMTLVDATSLRRQIIKLNRRLQLLEEENKERQKREMIMYSVTVAFWLLNTWIWLR 291
 
Name Accession Description Interval E-value
Miff pfam05644
Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and ...
 119-182 2.12e-06

Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and peroxisomal fission.


Pssm-ID: 461701  Cd Length: 292  Bit Score: 46.75  E-value: 2.12e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114690505  119 DAVAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLWMN 182
Cdd:pfam05644 228 DSTLDLTPDDMTLVDATSLRRQIIKLNRRLQLLEEENKERQKREMIMYSVTVAFWLLNTWIWLR 291
 
Name Accession Description Interval E-value
Miff pfam05644
Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and ...
 119-182 2.12e-06

Mitochondrial and peroxisomal fission factor Mff; This protein has a role in mitochondrial and peroxisomal fission.


Pssm-ID: 461701  Cd Length: 292  Bit Score: 46.75  E-value: 2.12e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114690505  119 DAVAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLWMN 182
Cdd:pfam05644 228 DSTLDLTPDDMTLVDATSLRRQIIKLNRRLQLLEEENKERQKREMIMYSVTVAFWLLNTWIWLR 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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