|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
15-371 |
1.96e-144 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 418.03 E-value: 1.96e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00156 2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFprTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00156 82 ICIYLHIGRGIYYGSYKL--KHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00156 160 VDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNI-DKIPFHPYFTFKDLVGFIIMLMLLILLTLINPY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00156 239 LLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIF 318
|
330 340 350
....*....|....*....|....*....|....*..
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLL 371
Cdd:MTH00156 319 VNIVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
15-374 |
2.18e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 376.05 E-value: 2.18e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:COG1290 21 ASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFF 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:COG1290 101 AAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEF 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYL-LPFVIALLSAYHIYQLHKSGSSNELGIRSHYLNK---ISFYPYFLVKDFFGLFIILFVFSIFVF 250
Cdd:COG1290 181 PGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEKvdgVPFHPYYTVKDGFGFFVFLGVFALLAF 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 251 FFPeaFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSI--LNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNR 328
Cdd:COG1290 261 FFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIpgSAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRT 338
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 11466189 329 TLFWFFSFNFLFLGYLGSQAPVypYIEFGVICSHFHLLYFFLLIPL 374
Cdd:COG1290 339 ALGVAFIVFFIVLTILGANPPI--ATLLGSINTVTYFAFFLIVLPI 382
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
14-211 |
6.49e-78 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 242.27 E-value: 6.49e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 14 SKALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFF 93
Cdd:cd00284 3 LIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 94 FFLVYIHILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGY 173
Cdd:cd00284 83 FLMLYLHIFRGLYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGF 162
|
170 180 190
....*....|....*....|....*....|....*...
gi 11466189 174 SINNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSS 211
Cdd:cd00284 163 SVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
21-209 |
3.24e-68 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 216.86 E-value: 3.24e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:pfam00033 81 IFRGLYYGGFSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSG 209
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb_ExtP |
NF040969 |
selenite/tellurite reduction operon b-type cytochrome ExtP; |
25-211 |
2.83e-40 |
|
selenite/tellurite reduction operon b-type cytochrome ExtP;
Pssm-ID: 468899 Cd Length: 205 Bit Score: 143.97 E-value: 2.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 25 PTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIHILKG 104
Cdd:NF040969 16 RRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWAANLMVVMVFLHMLRV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 105 IYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATLNRFF 184
Cdd:NF040969 96 FYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQLGGSEVGAATLTRFY 175
|
170 180
....*....|....*....|....*...
gi 11466189 185 SLH-YLLPFVIALLSAYHIYQLHKSGSS 211
Cdd:NF040969 176 ALHvFVLPAALIILMAAHFWRIRKQGIS 203
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
15-371 |
1.96e-144 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 418.03 E-value: 1.96e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00156 2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFprTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00156 82 ICIYLHIGRGIYYGSYKL--KHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00156 160 VDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNI-DKIPFHPYFTFKDLVGFIIMLMLLILLTLINPY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00156 239 LLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIF 318
|
330 340 350
....*....|....*....|....*....|....*..
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLL 371
Cdd:MTH00156 319 VNIVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
10-375 |
8.08e-142 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 412.38 E-value: 8.08e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 10 VNFVSKALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANG 89
Cdd:MTH00145 8 SHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 90 ASFFFFLVYIHILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWV 169
Cdd:MTH00145 88 ASFFFICIYLHIGRGLYYGSYLMQHT--WNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 170 WGGYSINNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFV 249
Cdd:MTH00145 166 WGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSD-GDKVPFHPYYTIKDLVGFVVLLFLLVFLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 250 FFFPEAFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRT 329
Cdd:MTH00145 245 LFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQV 324
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 11466189 330 LFWFFSFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYfFLLIPLS 375
Cdd:MTH00145 325 LFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLF-FLILPLV 369
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
15-374 |
1.83e-139 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 405.84 E-value: 1.83e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00191 9 KIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00191 89 ICIYLHIGRGLYYGSYLNKET--WNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00191 167 VDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSD-SDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPN 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00191 246 LLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLW 325
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00191 326 VANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
21-374 |
7.41e-133 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 389.65 E-value: 7.41e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:MTH00119 19 LIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:MTH00119 99 IGRGLYYGSYLYKET--WNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNHSD 260
Cdd:MTH00119 177 TRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNT-DKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 261 NYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNFLF 340
Cdd:MTH00119 256 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLI 335
|
330 340 350
....*....|....*....|....*....|....
gi 11466189 341 LGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00119 336 LTWIGSQPVEHPFIIIGQLASILYFTILLILFPL 369
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
15-371 |
2.69e-131 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 385.57 E-value: 2.69e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00016 13 KIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00016 93 ICLYLHIGRGIYYGSYFLMET--WNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00016 171 VDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSN-SDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00016 250 ILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLL 329
|
330 340 350
....*....|....*....|....*....|....*..
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLL 371
Cdd:MTH00016 330 VSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
15-374 |
2.18e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 376.05 E-value: 2.18e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:COG1290 21 ASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFF 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:COG1290 101 AAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEF 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYL-LPFVIALLSAYHIYQLHKSGSSNELGIRSHYLNK---ISFYPYFLVKDFFGLFIILFVFSIFVF 250
Cdd:COG1290 181 PGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEKvdgVPFHPYYTVKDGFGFFVFLGVFALLAF 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 251 FFPeaFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSI--LNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNR 328
Cdd:COG1290 261 FFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIpgSAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRT 338
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 11466189 329 TLFWFFSFNFLFLGYLGSQAPVypYIEFGVICSHFHLLYFFLLIPL 374
Cdd:COG1290 339 ALGVAFIVFFIVLTILGANPPI--ATLLGSINTVTYFAFFLIVLPI 382
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
19-374 |
1.01e-123 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 366.33 E-value: 1.01e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 19 SYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVY 98
Cdd:MTH00022 15 GFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLY 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 99 IHILKGIYYGSYYfpRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNA 178
Cdd:MTH00022 95 IHIGRGLYYGGYL--KFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 179 TLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNH 258
Cdd:MTH00022 173 TLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSV-DKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 259 SDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNF 338
Cdd:MTH00022 252 PENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDF 331
|
330 340 350
....*....|....*....|....*....|....*.
gi 11466189 339 LFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00022 332 ILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPL 367
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
19-374 |
5.63e-122 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 362.10 E-value: 5.63e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 19 SYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVY 98
Cdd:MTH00053 17 SMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 99 IHILKGIYYGSYYfpRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNA 178
Cdd:MTH00053 97 FHIGRGIYYGSYT--KIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 179 TLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNH 258
Cdd:MTH00053 175 TLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSD-IDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 259 SDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNF 338
Cdd:MTH00053 254 AENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDF 333
|
330 340 350
....*....|....*....|....*....|....*.
gi 11466189 339 LFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00053 334 FLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPL 369
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
21-375 |
1.81e-120 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 357.80 E-value: 1.81e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:MTH00100 18 FIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:MTH00100 98 VGRGLYYGSYLFLET--WNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNHSD 260
Cdd:MTH00100 176 TRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSD-SDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPD 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 261 NYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNFLF 340
Cdd:MTH00100 255 NYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
|
330 340 350
....*....|....*....|....*....|....*
gi 11466189 341 LGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPLS 375
Cdd:MTH00100 335 LTWIGGQPVEHPFIIIGQLASILYFLIILILMPIA 369
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
15-375 |
1.92e-120 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 357.84 E-value: 1.92e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00074 13 KIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00074 93 ICIYLHIGRGLYYGSYMYKET--WNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00074 171 VDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSN-PDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00074 250 LLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLL 329
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPLS 375
Cdd:MTH00074 330 VANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLT 370
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
21-375 |
6.04e-119 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 353.96 E-value: 6.04e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:MTH00131 18 LVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLH 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:MTH00131 98 IGRGLYYGSYLYKET--WNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHyLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNHSD 260
Cdd:MTH00131 176 TRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSD-ADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPD 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 261 NYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNFLF 340
Cdd:MTH00131 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLI 334
|
330 340 350
....*....|....*....|....*....|....*
gi 11466189 341 LGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPLS 375
Cdd:MTH00131 335 LTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLA 369
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
15-374 |
1.61e-118 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 352.86 E-value: 1.61e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00034 12 KILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYfpRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00034 92 ICLYFHIGRGLYYGSYV--NIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00034 170 VDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNY-DKVPFHTYFTTKDLVGFLILFAALSSLALLFPT 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00034 249 ALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLL 328
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00034 329 IATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPL 368
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
15-372 |
4.82e-108 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 326.11 E-value: 4.82e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 15 KALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFF 94
Cdd:MTH00224 13 KILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 95 FLVYIHILKGIYYGSYYFPRTlvWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYS 174
Cdd:MTH00224 93 LFIYLHVGRGLYYGSFNLSET--WNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 175 INNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPE 254
Cdd:MTH00224 171 VDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADS-ARIPFHPYYSIKDALGYLIAILLLSLMVLFEPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 255 AFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFF 334
Cdd:MTH00224 250 LFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLL 329
|
330 340 350
....*....|....*....|....*....|....*...
gi 11466189 335 SFNFLFLGYLGSQAPVYPYIEFGVIcshFHLLYFFLLI 372
Cdd:MTH00224 330 VTSWAILTWIGGRPVEDPFEGIGQV---FTILYFSYFI 364
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
21-374 |
3.07e-94 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 291.07 E-value: 3.07e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:MTH00033 15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYyfPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:MTH00033 95 IGRGLYYGGY--SRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRShYLNKISFYPYFLVKDFFGlFIILFVFSIFVFFFP---EAFN 257
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVG-LSDRTAFHVYFTIKDILG-FLILFGVFVIIGIEPrieTLLQ 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 258 HSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFN 337
Cdd:MTH00033 251 DPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGD 330
|
330 340 350
....*....|....*....|....*....|....*...
gi 11466189 338 FLFLGYLGSQ-APVYPYIEFGVICSHFHLLYFFLLIPL 374
Cdd:MTH00033 331 FIILTWIGSApAGADPYVLIGRIATIFYFGYFLVLVPL 368
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
19-371 |
1.49e-91 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 282.98 E-value: 1.49e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 19 SYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVY 98
Cdd:MTH00086 5 SLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLY 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 99 IHILKGIYYGSYYFprTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNA 178
Cdd:MTH00086 85 LHIFKGLFMMSYRL--KKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 179 TLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYLnKISFYPYFLVKDFFGLFIILfVFSIFVFFFPEAFNH 258
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYD-KICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 259 SDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKsliKNKTFKPFNRTLFWFFSFNF 338
Cdd:MTH00086 241 PEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNN---YTSCLNKLNKFLVFSFIVVN 317
|
330 340 350
....*....|....*....|....*....|...
gi 11466189 339 LFLGYLGSQAPVYPYIEFGVICSHFHLLYFFLL 371
Cdd:MTH00086 318 VILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
14-211 |
6.49e-78 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 242.27 E-value: 6.49e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 14 SKALYSYLIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFF 93
Cdd:cd00284 3 LIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 94 FFLVYIHILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGY 173
Cdd:cd00284 83 FLMLYLHIFRGLYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGF 162
|
170 180 190
....*....|....*....|....*....|....*...
gi 11466189 174 SINNATLNRFFSLHYLLPFVIALLSAYHIYQLHKSGSS 211
Cdd:cd00284 163 SVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
21-370 |
1.79e-73 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 236.42 E-value: 1.79e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYyfPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:MTH00046 89 MGRALYYSSY--SKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNHSD 260
Cdd:MTH00046 167 VRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 261 NYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSliknkTFKPFNRTLFWFFSFNFLF 340
Cdd:MTH00046 247 AYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWVPTFNGSS-----VYSVWRQVNFWLIVSLFFS 321
|
330 340 350
....*....|....*....|....*....|
gi 11466189 341 LGYLGSQAPVYPYIEFGVICSHFHLLYFFL 370
Cdd:MTH00046 322 LSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
21-209 |
3.24e-68 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 216.86 E-value: 3.24e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 21 LIKYPTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIH 100
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 101 ILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATL 180
Cdd:pfam00033 81 IFRGLYYGGFSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 11466189 181 NRFFSLHYLLPFVIALLSAYHIYQLHKSG 209
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
36-214 |
8.43e-41 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 146.01 E-value: 8.43e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 36 FGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIHILKGIYYGSYYFPRT 115
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 116 LVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATLNRFFSLH-YLLPFVI 194
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 11466189 195 ALLSAYHIYQLHKSGSSNEL 214
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| cytb_ExtP |
NF040969 |
selenite/tellurite reduction operon b-type cytochrome ExtP; |
25-211 |
2.83e-40 |
|
selenite/tellurite reduction operon b-type cytochrome ExtP;
Pssm-ID: 468899 Cd Length: 205 Bit Score: 143.97 E-value: 2.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 25 PTPMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIHILKG 104
Cdd:NF040969 16 RRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWAANLMVVMVFLHMLRV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 105 IYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATLNRFF 184
Cdd:NF040969 96 FYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGTLLQLLQLGGSEVGAATLTRFY 175
|
170 180
....*....|....*....|....*...
gi 11466189 185 SLH-YLLPFVIALLSAYHIYQLHKSGSS 211
Cdd:NF040969 176 ALHvFVLPAALIILMAAHFWRIRKQGIS 203
|
|
| petB |
CHL00070 |
cytochrome b6 |
27-214 |
6.58e-37 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 135.23 E-value: 6.58e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 27 PMNINYLWNFGFMSAIFLVIQIVSGLFLTFFFTPHVDLAFFSVEHIMRDVNYGWLIRYIHANGASFFFFLVYIHILKGIY 106
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 107 YGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVWGGYSINNATLNRFFSL 186
Cdd:CHL00070 107 TGGFKKPRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 11466189 187 H-YLLPFVIALLSAYHIYQLHKSGSSNEL 214
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
91-242 |
7.31e-33 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 122.74 E-value: 7.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 91 SFFFFLVYIHILKGIYYGSYYFPRTLVWFTGVIIYILMMGTAFLGYVLPWGQMSYWAATVITNFVTVIPVVGKDIVYWVW 170
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 11466189 171 GGYSINNATLNRFFSLH-YLLPFVIALLSAYHIYQLHKSGSSNELGIRSHYlNKISFYPYFLVKDFFGLFIIL 242
Cdd:pfam13631 81 GGPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNV-VGVPFWPVFAVKMLLFFLITV 152
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
220-354 |
1.36e-27 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 107.73 E-value: 1.36e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 220 YLNKISFYPYFLVKDFFGLFIILFVFSIFVFFFPEAFNHSDNYIKANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIII 299
Cdd:cd00290 8 DMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPNKLLGVLA 87
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 11466189 300 MFVSLLVLFILPFVDKSlIKNKTFKPFNRTLFWFFSFNFLFLGYLGSQAPVYPYI 354
Cdd:cd00290 88 MAASILSLFLVPFLENS-NKRSQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFS 141
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
265-361 |
1.67e-27 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 105.64 E-value: 1.67e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 11466189 265 ANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSLIKNKTFKPFNRTLFWFFSFNFLFLGYL 344
Cdd:pfam00032 2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81
|
90
....*....|....*..
gi 11466189 345 GSQAPVYPYIEFGVICS 361
Cdd:pfam00032 82 GKQPPTGPYTLLGQIAT 98
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
264-328 |
2.51e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 56.16 E-value: 2.51e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 11466189 264 KANPLVTPAHIVPEWYFLPLYGILRSILNKTYGIIIMFVSLLVLFILPFVDKSlikNKTFKPFNR 328
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENV---NKFQNPFRR 126
|
|
| |
