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Conserved domains on  [gi|1145111237|gb|OOB47641|]
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drug:proton antiporter [Burkholderia cenocepacia]

Protein Classification

GNAT family protein( domain architecture ID 106742)

GNAT (Gcn5-related N-acetyltransferase) family protein similar to N-acetyltransferases that catalyze the transfer of an acetyl group from acetyl-CoA to a substrate

PubMed:  15581578

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NAT_SF super family cl17182
N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of ...
1-154 7.60e-20

N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase which catalyze the transfer of an acetyl group to a substrate. The mechanism is an ordered Bi-Bi ternary complex kinetic mechanism for most GNATs: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and then CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/ph enylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.


The actual alignment was detected with superfamily member PRK10314:

Pssm-ID: 473072 [Multi-domain]  Cd Length: 153  Bit Score: 81.43  E-value: 7.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1145111237   1 MEWHCCEFEHLSAVDLYAILRARNAVLVVEDAHTHLDIDGKD-AGALHVFASVHDGdttEVAAYARILPGDDIDPDVVID 79
Cdd:PRK10314    2 IEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDlTGDNRHILGWKND---ELVAYARILKSDDDLEPVVIG 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1145111237  80 KVLTSESCRDDDTLERLIGRALTAAQAAWPDTAVRTHVPAPRQAFYKRFGFRKAYGPYLEQGAPFVGLVRSADRA 154
Cdd:PRK10314   79 RVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA 153
 
Name Accession Description Interval E-value
PRK10314 PRK10314
GNAT family N-acetyltransferase;
1-154 7.60e-20

GNAT family N-acetyltransferase;


Pssm-ID: 182373 [Multi-domain]  Cd Length: 153  Bit Score: 81.43  E-value: 7.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1145111237   1 MEWHCCEFEHLSAVDLYAILRARNAVLVVEDAHTHLDIDGKD-AGALHVFASVHDGdttEVAAYARILPGDDIDPDVVID 79
Cdd:PRK10314    2 IEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDlTGDNRHILGWKND---ELVAYARILKSDDDLEPVVIG 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1145111237  80 KVLTSESCRDDDTLERLIGRALTAAQAAWPDTAVRTHVPAPRQAFYKRFGFRKAYGPYLEQGAPFVGLVRSADRA 154
Cdd:PRK10314   79 RVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA 153
ElaA COG2153
Predicted N-acyltransferase, GNAT family [General function prediction only];
15-152 1.09e-16

Predicted N-acyltransferase, GNAT family [General function prediction only];


Pssm-ID: 441756 [Multi-domain]  Cd Length: 134  Bit Score: 72.52  E-value: 1.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1145111237  15 DLYAILRARNAVLVVE-DAHTHLDIDGKDAGALHVFAsVHDGdttEVAAYARILPgdDIDPDVVIDKVLTSESCRDDDTL 93
Cdd:COG2153     3 ELYDALALRREVFVVEqGVPPYLELDGKDEDARHLLA-YDDG---ELVATARLLP--PGDGEAKIGRVAVLPEYRGQGLG 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1145111237  94 ERLIGRALTAAQAAwPDTAVRTHVPAPRQAFYKRFGFRKAYGPYLEQGAPFVGLVRSAD 152
Cdd:COG2153    77 RALMEAAIEEARER-GARRIVLSAQAHAVGFYEKLGFVPVGEEFLEAGIPHIDMRKPLS 134
 
Name Accession Description Interval E-value
PRK10314 PRK10314
GNAT family N-acetyltransferase;
1-154 7.60e-20

GNAT family N-acetyltransferase;


Pssm-ID: 182373 [Multi-domain]  Cd Length: 153  Bit Score: 81.43  E-value: 7.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1145111237   1 MEWHCCEFEHLSAVDLYAILRARNAVLVVEDAHTHLDIDGKD-AGALHVFASVHDGdttEVAAYARILPGDDIDPDVVID 79
Cdd:PRK10314    2 IEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDlTGDNRHILGWKND---ELVAYARILKSDDDLEPVVIG 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1145111237  80 KVLTSESCRDDDTLERLIGRALTAAQAAWPDTAVRTHVPAPRQAFYKRFGFRKAYGPYLEQGAPFVGLVRSADRA 154
Cdd:PRK10314   79 RVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA 153
ElaA COG2153
Predicted N-acyltransferase, GNAT family [General function prediction only];
15-152 1.09e-16

Predicted N-acyltransferase, GNAT family [General function prediction only];


Pssm-ID: 441756 [Multi-domain]  Cd Length: 134  Bit Score: 72.52  E-value: 1.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1145111237  15 DLYAILRARNAVLVVE-DAHTHLDIDGKDAGALHVFAsVHDGdttEVAAYARILPgdDIDPDVVIDKVLTSESCRDDDTL 93
Cdd:COG2153     3 ELYDALALRREVFVVEqGVPPYLELDGKDEDARHLLA-YDDG---ELVATARLLP--PGDGEAKIGRVAVLPEYRGQGLG 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1145111237  94 ERLIGRALTAAQAAwPDTAVRTHVPAPRQAFYKRFGFRKAYGPYLEQGAPFVGLVRSAD 152
Cdd:COG2153    77 RALMEAAIEEARER-GARRIVLSAQAHAVGFYEKLGFVPVGEEFLEAGIPHIDMRKPLS 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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