|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
5-568 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 625.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 5 MTIDKMGAVVLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLG 84
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 85 DLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLN 164
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 165 VGSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSy 244
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFS- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 245 SELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNM 324
Cdd:MTH00165 240 SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 325 SNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYS 404
Cdd:MTH00165 320 SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYS 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 405 MTGDFQFIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPLISLLGVVGGYVMPMLFTYS 484
Cdd:MTH00165 400 MSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSY 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 485 IHIFLMS---SSFLGSMWFMPSLFTQGIIKVPLNMGEFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLL 561
Cdd:MTH00165 480 NLKSLKNyklSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLL 559
|
....*..
gi 1143272921 562 SFGYWMV 568
Cdd:MTH00165 560 SFLLWMI 566
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
13-565 |
6.35e-167 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 486.27 E-value: 6.35e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 13 VVLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFI 92
Cdd:MTH00151 9 FLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 93 IVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNYIY 172
Cdd:MTH00151 89 WLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 173 YMNSLKEEWCGFMVVVliilAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLI 252
Cdd:MTH00151 169 MWDFKLSGWLGLLLVL----AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 253 IIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRF 332
Cdd:MTH00151 245 FISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 333 MGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQFI 412
Cdd:MTH00151 325 LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSS 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 413 GSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPLISLLGVVGGYVMpMLFTYSIHIFLMSS 492
Cdd:MTH00151 405 SLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGF-WDSGFSSSKMVKLS 483
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1143272921 493 SFLGSMWFMPSLFTQGIIKVPLNMGEFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSFGY 565
Cdd:MTH00151 484 FFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILL 556
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
9-567 |
1.55e-162 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 475.29 E-value: 1.55e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 9 KMGAVVLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYI 88
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 89 TRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSW 168
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 169 NyIYYMNSLKEewCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELM 248
Cdd:MTH00209 163 N-IFYLNFNSN--LGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 249 DFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQ 328
Cdd:MTH00209 240 MSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 329 DIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGD 408
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 409 FQFIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPLISLLGVVGGYVMPMLFTYSIHiF 488
Cdd:MTH00209 400 NSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIK-G 478
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1143272921 489 LMSSSFLGSMWFMPSLFTQGIIKVPLNMGEFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSFGYWM 567
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLIL 557
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
12-561 |
8.08e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 448.06 E-value: 8.08e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 12 AVVLLLFSLISMIS-GLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITR 90
Cdd:MTH00207 10 ASYLLWFMSILMFPlSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSR 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 91 FIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNY 170
Cdd:MTH00207 90 FISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 171 IYYMNSLKEEWcgfmVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDF 250
Cdd:MTH00207 170 TNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 251 LIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDI 330
Cdd:MTH00207 246 LLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 331 RFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQ 410
Cdd:MTH00207 326 RTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 411 FIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPLISLLGVVGGYvMPMLFTYSIHIFLM 490
Cdd:MTH00207 406 SSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAW-LFTTPNITKTPLLI 484
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1143272921 491 SSS----FLGSMWFMPSLFTQGIIKVPLNMGEFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLL 561
Cdd:MTH00207 485 NNPlshfASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLM 559
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
17-563 |
8.53e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 348.48 E-value: 8.53e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 17 LFSLISMISGLNFIMQGL-IIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVV 95
Cdd:MTH00211 37 LSFFISLIPLLIFLDQGLeTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 96 MLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTAL-SNRIGDVGLLMAVAWML-NVGSWNYIYY 173
Cdd:MTH00211 117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 174 MNSLKEEWCGFMvvvLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLII 253
Cdd:MTH00211 197 FILNLDLTLFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 254 IGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFM 333
Cdd:MTH00211 274 LGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 334 GGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQFIG 413
Cdd:MTH00211 354 GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 414 SYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIY-EIPLMICLPWYMKFMIPLISLLGVVGGYVMPMLFTYSIHIFLMss 492
Cdd:MTH00211 434 LSPINENYKLLKNPLKRLALGSILAGFIITSNLPpEKPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTL-- 511
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143272921 493 SFLGSMWFMPSLFTQGIIKVPLNMGEF-TVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSF 563
Cdd:MTH00211 512 SFSNMLGYYPPIIHRLLPKLSLKWGQTlSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALL 583
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-400 |
7.10e-98 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 310.16 E-value: 7.10e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 8 DKMGAVVLLLFSLISMISGLNF---IMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLG 84
Cdd:COG1009 27 RRAAGWLAALAPLAAFVLSLLLfpaVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 85 DLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTA-LSNRIGDVGLLMAVAWML 163
Cdd:COG1009 107 DPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLG 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 164 N-VGSWNYIYYMNS---LKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSN 239
Cdd:COG1009 187 AiAGTLNFSELLAAaptILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 240 IIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGV 319
Cdd:COG1009 267 LFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 320 IIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFST-GLTVCYSF 398
Cdd:COG1009 347 VIHATGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGaFLTAFYSF 425
|
..
gi 1143272921 399 RL 400
Cdd:COG1009 426 RL 427
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
20-407 |
1.43e-95 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 304.01 E-value: 1.43e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 20 LISMISGLNFIMQGL-IIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLF 98
Cdd:MTH00004 45 LISLIPLTLFLNSGTeSITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 99 VLSMMFLIVSPNIISILLGWDGLGLVSYcLVIYYQNFKSY--SAGMLTALSNRIGDVGLLMAVAWM-LNVGSWN----YI 171
Cdd:MTH00004 125 LIAMLILITANNMFQLFIGWEGVGIMSF-LLIGWWSGRAEanTAALQAIIYNRIGDIGLILSMAWLaMTLNTWEiqqlFS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 172 YYMNSLkeewcgfMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFL 251
Cdd:MTH00004 204 PTQTPT-------LPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 252 IIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIR 331
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIR 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1143272921 332 FMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTG 407
Cdd:MTH00004 357 KMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTG 432
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-563 |
1.19e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 293.74 E-value: 1.19e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 20 LISMISGLNFIMQGL-IIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLF 98
Cdd:MTH00066 43 FISLIPLMIFINQGLeSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 99 VLSMMFLIVSPNIISILLGWDGLGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAW-MLNVGSWNyIYYMNS 176
Cdd:MTH00066 123 LIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWE-LQQIFL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 177 LKEEwcGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGM 256
Cdd:MTH00066 202 LNDN--STLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 257 LTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGL 336
Cdd:MTH00066 280 LTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 337 SWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTG-----DFQF 411
Cdd:MTH00066 360 QKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKfprslPLSP 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 412 IG--SYSIKD-----CWGPMLktmmvlmmmavmGGSLLSWIIYEIPLMI-CLPWYMKFMIPLISLLGVVGGYVMPMLFTY 483
Cdd:MTH00066 440 INenNPLIINpikrlAWGSII------------AGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSK 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 484 SIHIFLMsSSFLGSMWFMPSLFTQGIIKVPLNMG-EFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLS 562
Cdd:MTH00066 508 TTPKTKM-HSFSNLLAFFPTIIHRLSPKTNLNSGqNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTL 586
|
.
gi 1143272921 563 F 563
Cdd:MTH00066 587 F 587
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
14-563 |
1.46e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 289.18 E-value: 1.46e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 14 VLLLFSLISMISGLNFIMQG--LIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRF 91
Cdd:MTH00208 61 LLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAF 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 92 IIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTA-LSNRIGDVGLLMAVAW-MLNVGSWN 169
Cdd:MTH00208 141 FRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWN 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 170 Y--IYYMNSLKEEWCGFMVVVlIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSEL 247
Cdd:MTH00208 221 LneILSLNNSNSFLINILLFG-ILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWF 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 248 MDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNC 327
Cdd:MTH00208 300 LSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNE 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 328 QDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTG 407
Cdd:MTH00208 380 QDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLN 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 408 DFQFIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPlMICLPWYMKFMIPLISLLGVVggYVMPMLFTYSIHI 487
Cdd:MTH00208 460 NPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAA--FSFSFLLSLSSNP 536
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143272921 488 FLMSS-SFLGSMWFMPSLFTQGIIKVPLNMGEFTV-KTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSF 563
Cdd:MTH00208 537 INSNFfSFLSNQWFFVNISHSIIISFSFFTSLFGStRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSS 614
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
20-563 |
2.01e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 285.21 E-value: 2.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 20 LISMISGLNFIMQGL-IIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLF 98
Cdd:MTH00108 45 IISLIPTMMFIHSGQeMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 99 VLSMMFLIVSPNIISILLGWDGLGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAW-MLNVGSWN----YIY 172
Cdd:MTH00108 125 LITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDlqqiFML 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 173 YMNSLkeewcgFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLI 252
Cdd:MTH00108 205 NPNNS------NLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTL 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 253 IIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRF 332
Cdd:MTH00108 279 CLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 333 MGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQFI 412
Cdd:MTH00108 359 MGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFP 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 413 GSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIY--EIPLMIcLPWYMKFMIPLISLLGVVGGYVMPML-----FTYSI 485
Cdd:MTH00108 439 PLITINENNPLLINPIKRLLLGSIFAGFLISNNIPptTIPQMT-MPLYLKLTALAVTILGFILALELNLLtnnlkFKYPS 517
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1143272921 486 HIFLMSSSfLGsmwFMPSLFTQGIIKVPLNMGEFTVKT-IDQGWSEDFGSQSFYQWFMKFSQLLQwLQDNSLKIYLLSF 563
Cdd:MTH00108 518 NTFKFSNM-LG---YFPTIMHRLPPYMNLTMSQKLASMlLDLIWLEKILPKTISLIQMKASTTIS-NQKGLIKLYFLSF 591
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
8-400 |
1.25e-85 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 278.58 E-value: 1.25e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 8 DKMGAVVLLLFSLISMISGL----NFIMQGLIIFIE--WELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEY 81
Cdd:PRK06590 28 EKWAHLVGTGLVGLSALLSLvvffDFLLGGGRAFSQtlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 82 MLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTA-LSNRIGDVGLLMAVA 160
Cdd:PRK06590 108 MAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAfIVNRVGDVGLALGIF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 161 WML-NVGSWNY--IYYMNSLKEEWCGFMVVV---LIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLL 234
Cdd:PRK06590 188 LLFaEFGSLNYdeVFAAAPQFFGLGWSALTLiclLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLV 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 235 IRfSNIIYSYS-ELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALL 313
Cdd:PRK06590 268 AR-MSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALL 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 314 FMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLfIFSTGLT 393
Cdd:PRK06590 347 FLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAG-LVGAFLT 425
|
....*..
gi 1143272921 394 VCYSFRL 400
Cdd:PRK06590 426 AFYSFRL 432
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
40-400 |
7.50e-84 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 273.39 E-value: 7.50e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 40 WELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWD 119
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 120 GLGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNV-GSWNY--IYYMNSLKEEWCGFMVVVLIILAAM 195
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 196 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKI 275
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 276 IALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALC 355
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1143272921 356 GMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRL 400
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRL 429
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
20-405 |
3.20e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 258.61 E-value: 3.20e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 20 LISMISGLNFIMQGL-IIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLF 98
Cdd:MTH00137 49 FVSLLPLFLFLNQGAeTIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 99 VLSMMFLIVSPNIISILLGWDGLGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWML-NVGSWNyIYYMNS 176
Cdd:MTH00137 129 LIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 177 LKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGM 256
Cdd:MTH00137 208 LSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 257 LTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGL 336
Cdd:MTH00137 288 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGL 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 337 SWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYY-SM 405
Cdd:MTH00137 368 HHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFvSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
40-563 |
1.07e-73 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 246.53 E-value: 1.07e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 40 WELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWD 119
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 120 GLGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLN-VGSWNY--IYYMNSLKEEWCGFMVVVLIILAAM 195
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 196 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKI 275
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 276 IALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALC 355
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 356 GMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGD-------FQFI--GSYSIkdcwgpmLK 426
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNtnlkkavFFHLheGDWNL-------LL 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 427 TMMVLMMMAVMGGSLLSWII--YEIPLMICLPWYMKFMIPLISLLGVVGGYVmpmLFTYSIHIF--------LMSSSFLG 496
Cdd:MTH00020 455 PLGILALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVII---LYFYSSKTFrvpfsfigRNSYTFLG 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143272921 497 SMWFMPSLFTQGIIKVPLNMGEF-TVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSF 563
Cdd:MTH00020 532 SAWQFNYILNYFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVI 599
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
15-505 |
5.33e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 226.72 E-value: 5.33e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 15 LLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIV 94
Cdd:MTH00095 2 NILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 95 VMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLmavawMLNVGSWNYIYYM 174
Cdd:MTH00095 82 LLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIF-----LFFSGFIFSSYYF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 175 NSLkeEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSeLMDFLIII 254
Cdd:MTH00095 157 FSF--SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMN-VMKIMLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 255 GMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMG 334
Cdd:MTH00095 234 GLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 335 GLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQFIGS 414
Cdd:MTH00095 314 NNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNV 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 415 YSIKdcwgpmLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPL--ISLLGVVGGYVMPMLFTYSIHIFLMSS 492
Cdd:MTH00095 394 YSSS------VLMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLfyLFMIMLFSFFFFKLLFKELKYKFFVDY 467
|
490
....*....|...
gi 1143272921 493 SFLGSMWFMPSLF 505
Cdd:MTH00095 468 FAKNVIYKLKNLK 480
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
41-561 |
8.44e-64 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 220.26 E-value: 8.44e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 41 ELFSINsssvvMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDG 120
Cdd:MTH00210 68 ELLTTY-----FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 121 LGLVSYCLV-IYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLN-VGSWNY-----IYYMNSLKEEWCgfMVVVLIILA 193
Cdd:MTH00210 143 VGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFstissLLVTNINKESLT--IICLLLFIG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 194 AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLS 273
Cdd:MTH00210 221 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 274 KIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLA 353
Cdd:MTH00210 301 KVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLS 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 354 LCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYYSMTGDFQ-----FIGSY-SIKDCWGPMLKT 427
Cdd:MTH00210 381 LMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNskkevFIGVHeSSWNITFPLLLL 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 428 MMVLMMMAVMGGSLLswIIYEIPLMIclPWYMKfMIPLI-SLLGVVGGYVM---------PMLFTYSIHIFLMSSSFLGS 497
Cdd:MTH00210 461 AFGSIFVGYLGKEVV--LSNVIPPIV--PNSIK-MIPLLfSLLGALLAFVIynsmvflikISRRGVSIRLYHVIYTFLNS 535
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1143272921 498 MWFMPSLFTQGIIKVPLNMGEF-TVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLL 561
Cdd:MTH00210 536 AWQFNYVINHFIVKNIWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYAL 600
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-409 |
6.13e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 216.43 E-value: 6.13e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 4 VMTIDKMGAVVLLLFS-LISMISGLNFIMQgliiFIEWElfSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYM 82
Cdd:PRK07376 42 VLLISLVGAAAVLSYAlLWSQIQGHEPYER----LFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYM 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 83 LGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTA-LSNRIGDVGLLMAvaw 161
Cdd:PRK07376 116 AHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAfVVNRVGDFGLLLG--- 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 162 MLNV----GSWNYIYYMNSLKE--------EWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTA 229
Cdd:PRK07376 193 ILGLfwatGSFDFDGIADRLSElvssgavsGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 230 GVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALF 309
Cdd:PRK07376 273 GVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYF 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 310 KALLFMCAGVIIHNMSN--------CQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMF 381
Cdd:PRK07376 353 KAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW 432
|
410 420
....*....|....*....|....*...
gi 1143272921 382 MYMLfiFSTGLTVCYSFRLSYYSMTGDF 409
Cdd:PRK07376 433 FVGF--LTAGMTAFYMFRMYFLTFEGEF 458
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
41-563 |
9.10e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 194.02 E-value: 9.10e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 41 ELFSINSSSVVMT---LLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLG 117
Cdd:MTH00032 60 ELYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 118 WDGLGLVSYCLVIYYQN-FKSYSAGMLTALSNRIGDVGLLMAVAWM-----------LNVGSW------NYIYYMNSLKE 179
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsldfltFNGGSVgsgimdRGYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 180 EWCGFMVV-VLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLT 258
Cdd:MTH00032 220 PLAPFAIIgILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 259 MVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGL-GASDMAFFHLLTHALFKALLFMCAGVIIHNMS-NCQDIRFMGGL 336
Cdd:MTH00032 300 AFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGL 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 337 SWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMM------------------------------------SNMNM 380
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSA 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 381 FMYMLFIFSTGLTVCYSFRLSYYSMTGDFQFIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEI----------- 449
Cdd:MTH00032 460 FAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivp 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 450 PLMICLPWYMKFMIPLISLLGVVGGYVMPML---FTYSIHIFLMSSSFLGSMWFMPSLFTQGIIKVPLNMGEF-TVKTID 525
Cdd:MTH00032 540 PLIKVMPTLMGLFGMGLCLWAQKGTREGELYwgfDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWgIYKTLD 619
|
570 580 590
....*....|....*....|....*....|....*...
gi 1143272921 526 QGWSEDFGSQSFYQWFMKFSQLLQWLQDNSLKIYLLSF 563
Cdd:MTH00032 620 RGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVL 657
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
46-400 |
3.56e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 189.48 E-value: 3.56e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 46 NSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVS 125
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 126 YCLVIyyqnfKSYSAG----MLTALSNRIGDVGLLMAVAWMLNV-GSWNYIYYMNS-LKEEWCGFMVV--VLIILAAMTK 197
Cdd:PRK12650 147 FFLIA-----RSGSGGeagsIRTLILTFFGGLTLLAAVAIAATQtGTTSLSGILHSdVWAEKPGLTTVvaVLIAVAAFTK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 198 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIA 277
Cdd:PRK12650 222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 278 LSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLAL 354
Cdd:PRK12650 302 YSTVSQLGWIVATIGVGtpfALTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1143272921 355 CGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGL----TVCYSFRL 400
Cdd:PRK12650 381 AAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARL 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
108-371 |
3.71e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.81 E-value: 3.71e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 108 SPNIISILLGWDGLGLVSYCLVIYY-QNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNYIYYM----NSLKEEWC 182
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 183 GFMVVVLIILAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNIIYSYS-ELMDFLIIIGMLTMV 260
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 261 MSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLS 337
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....
gi 1143272921 338 WYMPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-371 |
2.01e-47 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 177.03 E-value: 2.01e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 12 AVVLLLFSLISMISGLNFIMQGLIIFIEWELfsINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRF 91
Cdd:PRK12647 20 LALLPLALFLYFLSFIPEIAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 92 IIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIY-YQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVG---S 167
Cdd:PRK12647 98 YSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHEREAARRAALQALLVTGGGGLALLAGLILLGNVTgtyS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 168 WNYIYYMN-SLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSE 246
Cdd:PRK12647 178 LSELLASGdVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 247 LMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHN 323
Cdd:PRK12647 258 WQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGselAIKAAVLFLVAHSLYKGALFMVAGIIDHE 337
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1143272921 324 mSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK12647 338 -TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
53-400 |
3.51e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 170.71 E-value: 3.51e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 53 TLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 133 QNFKSYSAGMLTALSNRIGDVGLLMAVAWM-LNVGSWNYIYYMNSLKE--EWCGFMVVVLIILAAMTKSAQIPFSAWLPA 209
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAEldPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 210 AMA-APTPVSALVhSSTLVTAGVYLLIRFSNIIYSYSE---LMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLG 285
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPalfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 286 LMMSTLGLGASDM---AFFHLLTHALFKALLFMCAGVIIHnMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAG 362
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350
....*....|....*....|....*....|....*...
gi 1143272921 363 FYSSDLILEyMMMSNMNMFMYMLFIFSTGLTVCYSFRL 400
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
73-370 |
6.56e-47 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 175.47 E-value: 6.56e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 73 LIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYqnFKSYSAGmlTA-----LS 147
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPIAA--NAcqkafVT 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 148 NRIGDVGLLMAVA---WMlnVGSW----------NYIYY--MNSLKEEWCGFmvvvLIILAAMTKSAQIPFSAWLPAAMA 212
Cdd:CHL00025 182 NRVGDFGLLLGILgfyWI--TGSFefrdlfeifnNLIYNneVNLLFATLCAF----LLFLGPVAKSAQFPLHVWLPDAME 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 213 APTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLG 292
Cdd:CHL00025 256 GPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 293 LGASDMAFFHLLTHALFKALLFMCAGVIIHNM--------SNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFY 364
Cdd:CHL00025 336 IGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFW 415
|
....*.
gi 1143272921 365 SSDLIL 370
Cdd:CHL00025 416 SKDEIL 421
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
53-371 |
1.23e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 163.48 E-value: 1.23e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 53 TLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 133 -QNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNYIYYM----NSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWL 207
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAViasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 208 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLM 287
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 288 MSTLGLGASDM----------------AFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIAN 351
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|
gi 1143272921 352 LALCGMPFLAGFYSSDLILE 371
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFA 408
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
14-400 |
1.82e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 159.66 E-value: 1.82e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 14 VLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFII 93
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 94 VVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSwnyiyy 173
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGS------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 174 mnslkeewCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSySELMDFLII 253
Cdd:MTH00063 155 --------GSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGF-SWLSIFFSV 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 254 IGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNCQDIRFM 333
Cdd:MTH00063 226 LLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCV 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1143272921 334 GGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTGLTVCYSFRL 400
Cdd:MTH00063 306 YSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-399 |
2.19e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 163.44 E-value: 2.19e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 53 TLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 133 QNFKSYSAGMLTALSnRIGDVGLLMAVAWML---NVGSWN----------------YIYymnslkeewcgfmVVVLIILA 193
Cdd:PRK12648 151 HHRADARRGARMALT-VTGAGGLALLAGVLLlghIVGSYDldvvlaagdlirahplYPP-------------ALVLILLG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 194 AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIySYSELMdFLII--IGMLTMVMSGIGASLEYD 271
Cdd:PRK12648 217 AFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVL-AGTEEW-FWIVggAGLITLLLGAYFALFQHD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 272 LSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFH 348
Cdd:PRK12648 295 LKGLLAYSTISHLGLITLLLGLGsplAAVAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1143272921 349 IANLALCGMPFLAGFYSSDLIL-EYMMMSNMNMFMYMLFIFST---GLTVCYSFR 399
Cdd:PRK12648 374 VAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLR 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-371 |
1.64e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 160.31 E-value: 1.64e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 54 LLFDWMSLIFMGFVMFISSLIIYYSSEYM-LGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIY- 131
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 132 YQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNYIYYM----NSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWL 207
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlgqaDHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 208 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLM 287
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 288 MSTLGLGASDM-----------------AFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIA 350
Cdd:PRK12646 314 MAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIA 392
|
330 340
....*....|....*....|.
gi 1143272921 351 NLALCGMPFLAGFYSSDLILE 371
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-371 |
2.41e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 160.09 E-value: 2.41e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 1 MFMVMTIDKMGAVVLLLFSLISMISGlnfimQGLIIFIEWelfsINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSE 80
Cdd:PRK12644 26 AFYVLALVPAAAFVWVLAQWPAVLAG-----GAPTEVVPW----IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCAR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 81 YM------LGdlyitRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKS-----YSAGMLTALSnr 149
Cdd:PRK12644 97 YFdddeprLG-----RFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAAsrraaLQALLVTTAG-- 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 150 igdvGLLMAVAwMLNVGSWNYIYYMNSLKEE-WCGFMV---VVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSST 225
Cdd:PRK12644 170 ----GLAMLVG-IIILGQAAGTYRLSELLADpPTGPAVsvaVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 226 LVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHL-- 303
Cdd:PRK12644 245 MVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLam 324
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1143272921 304 -LTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK12644 325 lLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALE 392
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
12-370 |
6.46e-41 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 154.75 E-value: 6.46e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 12 AVVLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVvMTLLFDWMSLIFMGFVMFISSLIIYYSSEYML-------G 84
Cdd:PRK06525 30 GVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpV 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 85 DLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLN 164
Cdd:PRK06525 109 HEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 165 VGSWNYIYYMNSLKEEwCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSY 244
Cdd:PRK06525 189 QTGTFALSALSGLHGS-LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 245 SELMDFLI-IIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGA--SDMAF----FHLLTHALFKALLFMCA 317
Cdd:PRK06525 268 PHVIGYVGaVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVA 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1143272921 318 GVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLIL 370
Cdd:PRK06525 348 GALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
13-371 |
1.32e-38 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 151.62 E-value: 1.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 13 VVLLLFslISMISGLNFIMQGLIIF--IEWelfsINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYM------LG 84
Cdd:PRK12645 37 VPVVLF--IYFLSLIPTTMSGNTVMktLPW----IPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLskkkeqLG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 85 DLYItrfiiVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAG----MLTALSNRIGDVGLLMAVA 160
Cdd:PRK12645 111 NFYV-----YLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGaqksMLITVFGGLSMLGGFILLY 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 161 WMLNVGSWNYIYYMNSLKEEWCGFMVV-VLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSN 239
Cdd:PRK12645 186 IMTGSFSIREMIANADEIQNSPLFIPAmILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTP 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 240 IIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDM----------------AFFHL 303
Cdd:PRK12645 266 IFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHL 345
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143272921 304 LTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK12645 346 INHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFE 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-371 |
2.05e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 151.13 E-value: 2.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 12 AVVLLLFSLISMISglNFIMQGLII--FIEWelfsINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYIT 89
Cdd:PRK12649 38 AIAFTSFALIAQVA--PEVIHGTIItgSISW----LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLP 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 90 RFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQN-----FKSYSAGMLTALSNRIGDVGLLM------- 157
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHrpesvYGATKSLLITAGGGLFMFAGFLLlhvitgt 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 158 -AVAWMLNVGSwnyiyYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 236
Cdd:PRK12649 192 yDIATILQDSE-----LIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVAR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 237 FSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASD-------MAFFHLLTHALF 309
Cdd:PRK12649 267 IHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATF 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143272921 310 KALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK12649 347 KACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
396-568 |
1.74e-31 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 120.35 E-value: 1.74e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 396 YSFRLSYYSMTGDFQFIGSYSIKDCWGPMLKTMMVLMMMAVMGGSLLSWIIYEIPLMICLPWYMKFMIPLISLLGVVGGY 475
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 476 VMPMLFTYSIHIFLM--SSSFLGSMWFMPSLFTQGIIKVPLNMGEFTVKTIDQGWSEDFGSQSFYQWFMKFSQLLQWLQD 553
Cdd:pfam06455 81 ELSNLSNKQLKKSLNfnLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170
....*....|....*
gi 1143272921 554 NSLKIYLLSFGYWMV 568
Cdd:pfam06455 161 GLIKIYLLSFLLWLL 175
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-403 |
7.61e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 119.98 E-value: 7.61e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 57 DWMSLIFMGFVMFISSLIIYYSseYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFK 136
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 137 SYSAGMLTALSNRIGDVGLLMAVAWMLNV-GSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPT 215
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 216 PVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMD-----FLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMST 290
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFAlglgwLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 291 LGLGASDM---AFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSD 367
Cdd:PRK08375 314 LALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
330 340 350
....*....|....*....|....*....|....*.
gi 1143272921 368 LILEyMMMSNMNMFMYMLFIFSTGLTVCYSFRLSYY 403
Cdd:PRK08375 393 YLVV-GAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
146-365 |
2.17e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 113.85 E-value: 2.17e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 146 LSNRIGDVGLLMAVAWMLNV-GSWNYiyymnSLKEEWC---------GFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPT 215
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNF-----SDLAAWAatanldpltATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 216 PVSALvHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTmvmsGIGASL----EYDLSKIIALSTLSQLGLMMSTL 291
Cdd:PRK07390 253 PASIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVT----AIGASLvaiaQIDIKRALSYSTSAYLGLVFIAV 327
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1143272921 292 GLGASDMAFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYS 365
Cdd:PRK07390 328 GLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-371 |
2.19e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 110.59 E-value: 2.19e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 52 MTLLFDWMSLIFMGFVMFISSLIIYYSSEY---MLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCL 128
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 129 VIY-YQNFKSYSAGMLTALSNRIGDVGL-LMAVAWMLNVGSWNYiyymnSLKEEWCGF--MVVVLIILAAMTKSAQIPFS 204
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFEL-----SPLGASAGIlsLVFLLLFLGFGIKAGIIPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 205 AWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSNIIYSYSELMDFLIII-GMLTMVMSGIGASLEYDLSKIIALSTLS 282
Cdd:PRK08667 226 KWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVLILLaGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 283 QLGLMM--------------STLGLGASDMAFFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFH 348
Cdd:PRK08667 305 NIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFL 383
|
330 340
....*....|....*....|...
gi 1143272921 349 IANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
97-370 |
2.24e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 110.75 E-value: 2.24e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 97 LFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKS-YSAGMLTALSNRIGDVGLLMAVAWML-NVGSWNYIYYM 174
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 175 NSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSniiysyselMDFL-- 251
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV---------FDLLga 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 252 ---------IIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLG----ASDM----------AFFHLLTHAL 308
Cdd:PRK06521 271 pgwwwgvlvLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiAYGMpllaalaltaALYHLLNHAL 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143272921 309 FKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLIL 370
Cdd:PRK06521 351 FKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-402 |
3.42e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 109.29 E-value: 3.42e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 57 DWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFK 136
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 137 -SYSAGMLTALSNRIGD------VGLL--------MAVAWMLNVGSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQI 201
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTtlyflaLAFLyatfgtlnMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 202 PFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSNIIY-SYSELMDF-------LIIIGMLTMVMSGIGASLEYDL 272
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFgISPSLIDFraalspiLIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 273 SKIIALSTLSQLGLMMSTLGLGAS---DMAFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHI 349
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1143272921 350 ANLALCGMPFLAGFYSSDLILEYMMMSNMNMFMYMLFIFSTgLTVCYSFRLSY 402
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-370 |
8.55e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.28 E-value: 8.55e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 112 ISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAW-MLNVGSWNYIYYMNSLKEEWcgfmvvVLI 190
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGAIAGLGGTAA------WLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 191 ILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FSNiiysyselMDFLIIIGmLTMVMSGIG-ASL 268
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARaFPG--------TELLIYIG-AAMAVYGVFfALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 269 EYDLSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHnMSNCQDIRFMGGLSWYMPITTC 345
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGtalAINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTAL 339
|
250 260
....*....|....*....|....*
gi 1143272921 346 CFHIANLALCGMPFLAGFYSSDLIL 370
Cdd:PRK12668 340 FCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
59-318 |
1.08e-22 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 101.70 E-value: 1.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 59 MSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKsy 138
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 139 sAGMLTA----LSNRIGDVGLLMAVA-WMLNVGSWnyiyymnSLKEEWCGF----------MVVVLIILAAMTKSAQIPF 203
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSL-------SLSALWAHLaaqgaspslqAAALLLVLAVILKTAQLPV 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 204 SAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQ 283
Cdd:PRK08168 220 HGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQ 298
|
250 260 270
....*....|....*....|....*....|....*
gi 1143272921 284 LGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAG 318
Cdd:PRK08168 299 MGFMLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-371 |
1.51e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 101.33 E-value: 1.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 57 DWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQN-F 135
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDtW 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 136 KSYSAGMLTALSNRIGDVGLLMAVAWM------LNVGswnYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPA 209
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLygqygtLNMA---YLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 210 AM-AAPTPVSALVHSSTLvtAGVYLLIRFSNIIYSYSELMDFL----IIIGMLTMVMSGIGASLEYDLSKIIALSTLSQL 284
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLATVgwviIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 285 GLMMSTLGLG---------------ASDMAFFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHI 349
Cdd:PRK08376 324 GYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLI 402
|
330 340
....*....|....*....|..
gi 1143272921 350 ANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYE 424
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
107-371 |
4.83e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 96.17 E-value: 4.83e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 107 VSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGM-LTALSNRIGDVGLLMAVAWMLNVGSWNYIYYMNSLKEewcgfm 185
Cdd:PRK07234 112 VCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPE------ 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 186 VVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYsysELMDFLIIIGMLTMVMSGIG 265
Cdd:PRK07234 186 AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP---GLDLIVRIFGVGTALLGVLF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 266 ASLEYDLSKIIALSTLSQLGLMmstlgLGASDMAFFHLLTHALFKALLFMCAGViIHNMSNCQDIRFMGGLSWYMPITtc 345
Cdd:PRK07234 263 ALLEKDLKRMLAFSTISQLGFI-----LAAPLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-- 334
|
250 260
....*....|....*....|....*.
gi 1143272921 346 cfhIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK07234 335 ---MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-371 |
4.19e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 90.65 E-value: 4.19e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 61 LIFMGFVMFISSLIIYYSSEYMLGDL--YITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSY 138
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 139 SAG-------MLTALSNRIGDVGLLMAVAWMLNVGSWNYIYYMNSLkeewcgfmVVVLIILAAMTKSAQIPFSAWLPAAM 211
Cdd:PRK06589 166 SGGykylkilMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSI--------ILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 212 AAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSELMDF------LIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLG 285
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 286 L------MMSTLGLGAsdmAFFHLLTHALFKALLFMCAGVIIhNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPF 359
Cdd:PRK06589 318 LallsafILTPKALGA---AILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330
....*....|..
gi 1143272921 360 LAGFYSSDLILE 371
Cdd:PRK06589 394 FSGFISKFLILL 405
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-402 |
5.29e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 90.83 E-value: 5.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 11 GAVVLLLFSLISMISGL--NFIMQGLIIFIEWEL-------FSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYS-SE 80
Cdd:PRK08668 13 GSVLAYLLKKINEKIGVigNALPLLFLIKLYFTLkvgtgekLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMvSE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 81 YMLGDLYITRFIIVVMLFVLSMMFlivSPNIISILLGWDGLGLVSYcLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVA 160
Cdd:PRK08668 93 KTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 161 WMLN-VGSWNYIYYMNSLKEEWCG---FMVVVLIILAAMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLI 235
Cdd:PRK08668 169 LIYAkTGTFDFADISQGLINDTSTgfaLIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 236 RFSNIIYSYSELMDF------------LIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGAS---DMAF 300
Cdd:PRK08668 248 LVLYVLPGTKLFSEFgtyrgvplfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 301 FHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILEYMMMSNMNM 380
Cdd:PRK08668 328 FHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPI 406
|
410 420
....*....|....*....|..
gi 1143272921 381 FMYMLFIFSTGLTVcYSFRLSY 402
Cdd:PRK08668 407 TAFMAFFGSIGSFL-YVFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
96-400 |
5.65e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 90.21 E-value: 5.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 96 MLFVLSMMF---LIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNV-GSWN-- 169
Cdd:PRK08377 112 MLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGAtGTLNma 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 170 YIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNIIY---SYS 245
Cdd:PRK08377 192 HIAQLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQnanGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 246 ELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIH 322
Cdd:PRK08377 271 SVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGtqaGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1143272921 323 NMSNCQdIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYSSDLILeYMMMSNMNMFMYMLFIFSTGLTVCYSFRL 400
Cdd:PRK08377 351 TLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
42-321 |
1.57e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 88.94 E-value: 1.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 42 LFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGD----LYITRFIIVvmLFVLSMMFLivSPNIISILLG 117
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDrsyrKYFALFTFT--TGFASLAWL--SGDLRLMALC 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 118 WdGLGLVSYCLVIYYQNF--KSYSAGMLTALSNRIGDVGLLMAVAWM-LNVGSWNYiyYMNSLKE------EWCGFMVVV 188
Cdd:PRK08601 132 W-GATLLGLTLLIGLNKGwkVAREAAKISGMLFLISWLALALAIVWLfIATGEWQL--TSVLSNEnlaqlgTWEKTGINL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 189 LIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMltMVMSGIGASL 268
Cdd:PRK08601 209 LLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASI--SVLIGTGISL 285
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1143272921 269 -EYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFKALLFMCAGVII 321
Cdd:PRK08601 286 vQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-365 |
6.14e-16 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 80.55 E-value: 6.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 11 GAVVLLLFSLI------SMISGLNFIMQGLIIFIEWELFSINSSSVVM-TLLFDWMSLIFMGFVMFISSLIIYYSSEYML 83
Cdd:COG1007 16 GALVLLLLDLFlprrsrRLLAGLALLGLLLALALLLLALGGGTGTAFGgMFVVDGFALFFKLLILLAALLVLLLSRDYLE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 84 G-DLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLV-IYYQNFKSYSAGM----LTALSNRIgdvgLLM 157
Cdd:COG1007 96 RrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSSGF----LLY 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 158 AVAWMLNV-GSWNYIYYMNSLKEEWC---GFMVVVLIILAAMT-KSAQIPFSAWLP-AAMAAPTPVSALVhsSTLV-TAG 230
Cdd:COG1007 172 GISLLYGAtGSLNLAGIAAALAAGGAnspLLLLGLVLVLAGLAfKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 231 VYLLIRFSNIIYS--YSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMM------STLGLGAsdmAFFH 302
Cdd:COG1007 250 FAALLRLLVEAFPglAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLlglaagTPLGVSA---ALFY 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1143272921 303 LLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYS 365
Cdd:COG1007 327 LLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFG 389
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
202-370 |
2.48e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 78.58 E-value: 2.48e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 202 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIAL 278
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 279 STLSQLGLMmsTLGLGASDM-----AFFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLA 353
Cdd:COG1008 306 SSVSHMGFV--LLGIFALNPlglqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALA 382
|
170
....*....|....*..
gi 1143272921 354 LCGMPFLAGFYSSDLIL 370
Cdd:COG1008 383 SLGLPGTSGFVGEFLVL 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-371 |
1.70e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.06 E-value: 1.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 186 VVVLIILAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNIIYSYSELMDFLII--IGMLTMVMS 262
Cdd:PRK07691 211 VAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFTHYLIliLALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 263 GIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDM---AFFHLLTHALFKALLFMCAGVIIHnMSNCQDIRFMGGLSWY 339
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190
....*....|....*....|....*....|..
gi 1143272921 340 MPITTCCFHIANLALCGMPFLAGFYSSDLILE 371
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-363 |
1.81e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.06 E-value: 1.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 185 MVVVLIILAAMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FSNIIYSYSELMDFLI-IIGMLTMVMS 262
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRvFTLLFPQERELLHPLLaTMAAITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 263 GIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDM---AFFHLLTHALFKALLFMCAGVIIHnMSNCQDIRFMGGLSWY 339
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRK 365
|
170 180
....*....|....*....|....
gi 1143272921 340 MPITTCCFHIANLALCGMPFLAGF 363
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGF 389
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
197-363 |
6.00e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.15 E-value: 6.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 197 KSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKI 275
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 276 IALSTLSQLGLMM------STLGLGAsdmAFFHLLTHALFKALLFMCAGvIIHNMSNCQDIRFMGGLSWYMPITTCCFHI 349
Cdd:PRK12665 301 LSFTLVSHIGYMVfgialsTVAGLSG---AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFV 376
|
170
....*....|....
gi 1143272921 350 ANLALCGMPFLAGF 363
Cdd:PRK12665 377 PALNLGGIPPFSGF 390
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-365 |
1.56e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 69.76 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 55 LFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQN 134
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 135 FKSYSAGMLTALSNRIG------DVGLLMAVAWMLNVGswNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLP 208
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMG--DMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 209 AAMAAPTPVSALVHSSTLVTAGVYLLIRF------SNIIYSYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLS 282
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 283 QLGLMMSTLGLGASD---MAFFHLLTHALFKALLFMCAGVIIHNMSNCqDIRFMGGLSWYMPITTCCFHIANLALCGMPF 359
Cdd:PRK12662 314 HIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
....*.
gi 1143272921 360 LAGFYS 365
Cdd:PRK12662 393 TSGFVA 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
4-370 |
1.87e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.57 E-value: 1.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 4 VMTIDKMGAVVLLLFSLISMISGLNFIMQGLIIFIEWELFSINSSSVVMTLLFDW-----MSLIFM---GFVMFISSLii 75
Cdd:PRK06458 10 LLLIPLLASLLLFALRKRRLVATLNVLGITLTLILALWLVFTVPDAGEIFAAGLWffiddLNVFFLaliGVVGFLTSL-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 76 yYSSEYMLGDLYITRFIIVVM--------LFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSY--------- 138
Cdd:PRK06458 88 -YSIGYMRHEVEHGELSPVTLrlyygmyqLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLeaawkyiii 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 139 -SAGMLTALsnrIGDVGLLMAVAWMLNVGS----WNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMA- 212
Cdd:PRK06458 167 cSVGVAFAL---FGTILVYANAATVMGDGEmailWTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSe 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 213 APTPVSALVhSSTLVTAGVYLLIRFsNIIYSYSELMDF----LIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMM 288
Cdd:PRK06458 244 APSPVSALL-SGVLLNVALYAVLRY-YILIDAAIGSDFpgrlLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 289 STLGLG---ASDMAFFHLLTHALFKALLFMCAGVIIHNmSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFYS 365
Cdd:PRK06458 322 FALGIGgplGIFAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
....*
gi 1143272921 366 SDLIL 370
Cdd:PRK06458 401 EFLIL 405
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-370 |
3.38e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.81 E-value: 3.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 57 DWMSLIFMGFVMFISSLIIYYSSEYMlgDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFK 136
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESI--QKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 137 SYSAGMLTALSNRIGDVGLLMAVAWM--LNVGSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMA-A 213
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 214 PTPVSALVhSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMstl 291
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL--- 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 292 gLGASDM-------AFFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFY 364
Cdd:TIGR01972 310 -LGIFSFnelgisgAVFQMISHGLITAALFLLVGVLYERAHT-RDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
....*.
gi 1143272921 365 SSDLIL 370
Cdd:TIGR01972 388 GEFLIL 393
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-363 |
1.19e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 67.54 E-value: 1.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 201 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSnIIYSYSELM--DFLIIIGMLTMVMSGIGASLEYDLSKIIA 277
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS-LLGGNAPLWwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 278 LSTLSQLGLMMSTLGLGASDMA--------------FFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPIT 343
Cdd:PRK08042 275 YHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVI 353
|
170 180
....*....|....*....|
gi 1143272921 344 TCCFHIANLALCGMPFLAGF 363
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGF 373
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
184-370 |
5.93e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 5.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 184 FMVVVLIILAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSNIIYS---YSELMDFLIIIGMLTM 259
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQsgaAEQFSNVLIGLGIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 260 VMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGvIIHNMSNCQDIRFMGGL 336
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGtplALFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDV 363
|
170 180 190
....*....|....*....|....*....|....
gi 1143272921 337 SWYMPITTCCFHIANLALCGMPFLAGFYSSDLIL 370
Cdd:PRK08676 364 FRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
18-364 |
1.08e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 64.25 E-value: 1.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 18 FSLISMISGLNFIMQGLIIFIEWELFSINSSSvvMTLLFDWMSLIFMGFVMFISSLIIYYSSEYML-GDLYITRFIIVVM 96
Cdd:CHL00049 41 IPWLYFISSTSLVMSITALLFQWREEPMISFS--GNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 97 LFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYY-QNFKSYSAGMLTALSNRIGDVGLLMAVAWM--LNVGSWNYIYY 173
Cdd:CHL00049 119 TATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEI 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 174 MNSLKEEWCGFMVVVLIILAAMT-----KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSNIIYSYS-- 245
Cdd:CHL00049 199 VNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSsn 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 246 ELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGLGASDMAFFHLLTHALFkaLLFM----CAGVII 321
Cdd:CHL00049 278 EWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMnlgtFACIVL 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1143272921 322 HNMSNCQD-IRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFY 364
Cdd:CHL00049 356 FGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
201-370 |
2.06e-10 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 63.30 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 201 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIA 277
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 278 LSTLSQLGLMmsTLGLGASDM-----AFFHLLTHALFKALLFMCAGVIIHNMSNcQDIRFMGGLSWYMPITTCCFHIANL 352
Cdd:PRK05846 307 YSSISHMGFV--TLGIFAGNQlgiqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAM 383
|
170
....*....|....*...
gi 1143272921 353 ALCGMPFLAGFYSSDLIL 370
Cdd:PRK05846 384 ASLGLPGTSGFVGEFLIL 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-364 |
3.45e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 62.53 E-value: 3.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 11 GAVVLLLF---------SLISMISGLNFIMQGLIIFIeweLFSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEY 81
Cdd:PRK05777 20 AAVVLLLIdafvrrhsrRATLAVLALLLALVALLFVL---GAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 82 mLGDLYITRFIIVVMLFVLSMMFLIVSPNIISILLGWDGLGLVSYCLVIY-YQNFKSYSAGM----LTALSNRIgdvgLL 156
Cdd:PRK05777 97 -LEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrRDRRRSLEAAIkyfvLGALASGF----LL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 157 MAVAWM-LNVGSWNYIYYMNSLKE----EWCGFMVVVLIILAAMTKSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVtAG 230
Cdd:PRK05777 172 YGMSLLyGATGSLSFAGIAKALADgsgnSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 231 VYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLG------LMMSTLGLGAsdmAFFH 302
Cdd:PRK05777 251 FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGyllvglAAGTAEGYSA---VLFY 327
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143272921 303 LLTHALFKALLFMCAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGFY 364
Cdd:PRK05777 328 LLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFW 389
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
197-365 |
9.91e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 54.65 E-value: 9.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 197 KSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSNIIYS--YSELMDFLIIIGMLTMVMSGIGASLEYDLS 273
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPdaHVYFAPALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 274 KIIALSTLSQLGLMMstLGLGASDM-----AFFHLLTHALFKALLFMCAGVI---IHNMSncqdIRFMGGLSWYMPITTC 345
Cdd:PRK12561 277 RRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFA 350
|
170 180
....*....|....*....|
gi 1143272921 346 CFHIANLALCGMPFLAGFYS 365
Cdd:PRK12561 351 LFTASSMASLALPGMSGFVS 370
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
52-371 |
1.07e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 54.65 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 52 MTLLFDWMSLIFMGFVMFISSL-IIYYSSEYMLGDLYITrfiIVVMLFVlSMMFLIVSPNIISILLGWDGLGLVSYCLVI 130
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLvLITGLGEKKSSGLYVF---LMLMGLA-SVSAIVLADDIFNLYVFFEIAAIVQVGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 131 YYQNFKSYSAGMLTALSNRIGDVGLLMAVAWML----NVGSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAW 206
Cdd:PRK06277 142 ASGTEEAYKAALKYMILGNVAGSILLLGIGFLLastgTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 207 LPAAMAAPTP-VSALVHSSTLVTAGVYLLIRFsNIIYSYSELMDF---LIIIGMLTMVMSGIGASLEYDLSKIIALSTLS 282
Cdd:PRK06277 222 KSDIYAKAKPfGSALLQTFSKFVLVALMLVIF-KLFGGLSYFPSAqgvLIALSVLAMVFGVVMALLQTDYKRLLAYHAIS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 283 QLGLMMSTLGLG---ASDMAFFHLLTHALFKALLFMCAGvIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPF 359
Cdd:PRK06277 301 QGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
330
....*....|..
gi 1143272921 360 LAGFYSSDLILE 371
Cdd:PRK06277 380 FNGFQSKLMLAQ 391
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-318 |
1.21e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.41 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 15 LLLFSLISMISGLNFIMQGLIifieweLFSINSSSVVMTLLFDWMSliFMGFVMFISSLIIYYSSEYMLGDLYITRFIIV 94
Cdd:PRK06459 5 ILPVFLISILLSIFNKKASYI------LTMISSIILLITSIYEYNG--VLSFFSIISTIVWILASLYSIEYDHYGKWLSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 95 VMLF-VLSMMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNfKSYSAGMLTALSNrigdvgllMAVAWMLNVGSWNYIYY 173
Cdd:PRK06459 77 LYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAFVFMAFGE--------LSTVLILAGFAWAFIIS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 174 MNSLKEEWCGFMVVVLIILAAMTKSAQIPF--SAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFS--NIIYSYSELM 248
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-ILSATMTLMGVYGILKMTilTQTIPIGYFG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 249 DFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTLGL------GASDMAFFHLLT-------HALFKALLFM 315
Cdd:PRK06459 227 LTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqLITSIEHFSLITvilysfaHSVAKTGLFL 306
|
...
gi 1143272921 316 CAG 318
Cdd:PRK06459 307 SSG 309
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-370 |
1.29e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 51.27 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 22 SMISGLNFIMqgLIIFIEWELFSINSSsvvmTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGdlyiTRFIIVVMLFVLS 101
Cdd:PRK12664 6 YAISLYGFFF--GLIFIVLPLLLYDWS----EPVYNLDLVLFIVLSFSLALIFLYILPIKNMR----FSEMLCYLLYYIS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 102 MMFLIVSPNIISILLGWDGLGLVSYCLVIYYQNFKSYSAGMLTALSNRIGDVGLLMAVAWMLNVGSWNYIYYMnslkeew 181
Cdd:PRK12664 76 SIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYCKL------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 182 cgfmvvvLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFsniiYSYSELMDFLiiiGMLTMVM 261
Cdd:PRK12664 149 -------LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF----FSGEEILLFL---GIITAIY 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 262 SGIGASLEYDLSKIIALSTLSQLGLMMSTLGL-----GASDMAFFHLLTHALFKALLFMCAGVIIhNMSNCQDIRFMGGL 336
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFsgssgVAIGILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGL 293
|
330 340 350
....*....|....*....|....*....|....
gi 1143272921 337 sWYMPITTCCFHIANLALCGMPFLAGFYSSDLIL 370
Cdd:PRK12664 294 -FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLIT 326
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
61-363 |
1.33e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.08 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 61 LIFMGFVMFISSLIIYYSSEYMLGDLYITrfiIVVMLFVLSMMFLIVSPNIISILlgWDGLGLVSYCLV-IYYQNFKSYS 139
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLTKSFLIC---MLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 140 AGMLTALSNRIGDVGLLMAVAWMLNV-GSWNYIYYM--NSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTP 216
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIhGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 217 VSALVHSSTLVTAGVYLLIRFSNIIYSY--SELMDFLIIIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMMSTL--- 291
Cdd:MTH00226 263 AGSVLLAGILLKLGGYGLVRLSWPILPLgaQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvth 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1143272921 292 ---GLGASdmaFFHLLTHALFKALLFMCAgVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGF 363
Cdd:MTH00226 343 diiGLTGS---IFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
43-91 |
5.31e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.87 E-value: 5.31e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1143272921 43 FSINSSSVVMTLLFDWMSLIFMGFVMFISSLIIYYSSEYMLGDLYITRF 91
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
184-369 |
7.63e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.46 E-value: 7.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 184 FMVVVLIILAAMTKSAQIPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMV 260
Cdd:PRK06473 205 LLLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFpeAWVYLAPWLATWAVVSVL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 261 MSGIGASLEYDLSKIIALSTLSQLGLMM---------STLGlgasdmAFFHLLTHALFKALLFMCAGViIHNMSNCQDIR 331
Cdd:PRK06473 284 YGASCAIAQKDMKKMVAYSSIGHMGYILlaaaaatplSILA------AVFQMISHGLISALLFLLVGV-VYKKTGSRDVD 356
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1143272921 332 FMGGL---SWYMPITTCCFHIANLALCGMPFLAGFYSSDLI 369
Cdd:PRK06473 357 VLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
185-363 |
1.71e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 185 MVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMS 262
Cdd:PRK07363 206 ILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqTWSLVAPGLAIIGTISVIYG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 263 GIGASLEYDLSKIIALSTLSQLG--LMMSTLGLGASDM-AFFHLLTHALFKALLFMCAGvIIHNMSNCQDIRFMGGLS-- 337
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnp 364
|
170 180
....*....|....*....|....*..
gi 1143272921 338 -WYMPITTCCFHIANLALCGMPFLAGF 363
Cdd:PRK07363 365 iRGLPLTSALLVLAGMASAGIPGLVGF 391
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
188-364 |
8.24e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 42.35 E-value: 8.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 188 VLIILAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-SNIIYSYSELMDFL-IIIGMLTMVMSGI 264
Cdd:PRK02504 214 VFVIAGIAFKISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSFDEQWKLLfTALAILSMVLGNV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 265 GASLEYDLSKIIALSTLSQLGLMMSTLGLGASD---MAFFHLLTHALFKALLFMCagVIIHNMSNCQD-IRFMGGLSWYM 340
Cdd:PRK02504 293 VALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAgyaSMVFYLLAYLFMNLGAFAC--VILFSLRTGTDqISDYAGLYQKD 370
|
170 180
....*....|....*....|....
gi 1143272921 341 PITTCCFHIANLALCGMPFLAGFY 364
Cdd:PRK02504 371 PLLTLGLSLCLLSLGGIPPLAGFF 394
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
197-365 |
1.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.59 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 197 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIYSYSE--LMDFLIIIGMLTMVMSGIGASLEYDLSK 274
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeyFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 275 IIALSTLSQLGLMmsTLGLGASDM-----AFFHLLTHALFKALLFMcAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHI 349
Cdd:MTH00204 302 LIAYSSVAHMGLV--PLGLFTHTIeglvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLV 378
|
170 180
....*....|....*....|
gi 1143272921 350 ANLALCGMP----FLAGFYS 365
Cdd:MTH00204 379 LSLANMGFPlscnFVGEFFS 398
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
201-357 |
3.25e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 201 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNIIY--SYSELMDFLIIIGMLTMVMSGIGASLEYDLSKIIAL 278
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLpdAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 279 STLSQLGLMMSTLG----LGASDmAFFHLLTHALFKALLFMCAGVIiHNMSNCQDIRFMGGLSWYMPI-----TTCCFhi 349
Cdd:PRK02546 310 SSISHMGFVLIGIGsftdLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKmfamwTACSL-- 385
|
....*...
gi 1143272921 350 ANLALCGM 357
Cdd:PRK02546 386 ASLALPGM 393
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
150-363 |
8.71e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 8.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 150 IGDVGLLMAVAWML-NVGSWNYIYYMNSLKEEWCGFMVVVLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVT 228
Cdd:MTH00217 171 IGSVFMLLGIFTLYsYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1143272921 229 AGVYLLIRFSNIIYSY-SELMDFLI-IIGMLTMVMSGIGASLEYDLSKIIALSTLSQLGLMmsTLGLGASDM-----AFF 301
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEaSEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLV--TLGIFSHTIqglvaAIF 328
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1143272921 302 HLLTHALFKALLFMcAGVIIHNMSNCQDIRFMGGLSWYMPITTCCFHIANLALCGMPFLAGF 363
Cdd:MTH00217 329 LMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| |
