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Conserved domains on  [gi|1142875554|gb|AQL22100|]
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hypothetical protein BBD64_17770 [Klebsiella variicola]

Protein Classification

glycosyltransferase family 2 protein( domain architecture ID 11440371)

glycosyltransferase family 2 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT2
EC:  2.4.-.-
Gene Ontology:  GO:0016757
PubMed:  9445404|12691742

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
49-143 9.21e-04

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


:

Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 38.44  E-value: 9.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142875554  49 SGLIIYKSLIDKfnkynLSLFDERFALYGVDLSLFRRIERLKKQNVVIKAMVtgkIFHLLSSTSEKMTEWRY--RERLYd 126
Cdd:COG1216   106 ACLLIRREVFEE-----VGGFDERFFLYGEDVDLCLRLRKAGYRIVYVPDAV---VYHLGGASSGPLLRAYYlgRNRLL- 176

                          90
                  ....*....|....*..
gi 1142875554 127 kvLSIKYYSKNHFRLIA 143
Cdd:COG1216   177 --FLRKHGPRPLLRLAL 191
 
Name Accession Description Interval E-value
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
49-143 9.21e-04

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 38.44  E-value: 9.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142875554  49 SGLIIYKSLIDKfnkynLSLFDERFALYGVDLSLFRRIERLKKQNVVIKAMVtgkIFHLLSSTSEKMTEWRY--RERLYd 126
Cdd:COG1216   106 ACLLIRREVFEE-----VGGFDERFFLYGEDVDLCLRLRKAGYRIVYVPDAV---VYHLGGASSGPLLRAYYlgRNRLL- 176

                          90
                  ....*....|....*..
gi 1142875554 127 kvLSIKYYSKNHFRLIA 143
Cdd:COG1216   177 --FLRKHGPRPLLRLAL 191
 
Name Accession Description Interval E-value
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
49-143 9.21e-04

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 38.44  E-value: 9.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142875554  49 SGLIIYKSLIDKfnkynLSLFDERFALYGVDLSLFRRIERLKKQNVVIKAMVtgkIFHLLSSTSEKMTEWRY--RERLYd 126
Cdd:COG1216   106 ACLLIRREVFEE-----VGGFDERFFLYGEDVDLCLRLRKAGYRIVYVPDAV---VYHLGGASSGPLLRAYYlgRNRLL- 176

                          90
                  ....*....|....*..
gi 1142875554 127 kvLSIKYYSKNHFRLIA 143
Cdd:COG1216   177 --FLRKHGPRPLLRLAL 191
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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