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Conserved domains on  [gi|1142826087|gb|AQK84174|]
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DCD (Development and Cell Death) domain protein [Zea mays]

Protein Classification

kelch repeat and DCD domain-containing protein( domain architecture ID 13770106)

kelch repeat and DCD (development and cell death) domain-containing protein similar to Arabidopsis thaliana influenza virus NS1A-binding protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Dev_Cell_Death pfam10539
Development and cell death domain; The DCD domain is found in plant proteins involved in ...
 21-149 1.16e-71

Development and cell death domain; The DCD domain is found in plant proteins involved in development and cell death. The DCD domain is an approximately 130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N-terminus and a PAQV and a PLxE motif towards the C-terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognisable motifs, like the KELCH repeats or the ParB domain.


:

Pssm-ID: 463141  Cd Length: 126  Bit Score: 228.94  E-value: 1.16e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087  21 GGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPLFLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGclrSAFP 100
Cdd:pfam10539   1 GGVIFMCNGKTKPECFRYQLFGLPAGHKDFVKKIKPGLPLFLFDYDLRLLYGIFEAASDGGMNIEPYAFTSSG---GPFP 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1142826087 101 AQVRICTKTRYPPLLESQFKTLLGDNYYNHHHFYFELDHAQTRALISLF 149
Cdd:pfam10539  78 AQVRFKIRKDCLPLPESEFKPAIKDNYYTKNKFRFELSHAQVRKLLSLF 126
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
482-732 8.30e-51

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 178.43  E-value: 8.30e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 482 LTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAG-ICLNEKIYAIGGGDGN--- 557
Cdd:COG3055     6 LPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPGPPRHHAAaVAQDGKLYVFGGFTGAnps 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 558 -EFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLT 636
Cdd:COG3055    86 sTPLNDVYVYDPATNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAAA 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 637 VLGD-TLYAMGGYDGdkmvssveiyDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSvqmLDTVEVYNASSG-W 714
Cdd:COG3055   166 VLPDgKILVIGGRNG----------SGFSNTWTTLAPLPTARAGHAAAVLGGKILVFGGESGF---SDEVEAYDPATNtW 232

                         250
                  ....*....|....*...
gi 1142826087 715 SVLGSSSIGMRSFASAVV 732
Cdd:COG3055   233 TALGELPTPRHGHAAVLT 250
Kelch smart00612
Kelch domain;
454-499 3.93e-08

Kelch domain;


:

Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 49.86  E-value: 3.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1142826087  454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMSSPRSYASAAVLDG 499
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
 
Name Accession Description Interval E-value
Dev_Cell_Death pfam10539
Development and cell death domain; The DCD domain is found in plant proteins involved in ...
 21-149 1.16e-71

Development and cell death domain; The DCD domain is found in plant proteins involved in development and cell death. The DCD domain is an approximately 130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N-terminus and a PAQV and a PLxE motif towards the C-terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognisable motifs, like the KELCH repeats or the ParB domain.


Pssm-ID: 463141  Cd Length: 126  Bit Score: 228.94  E-value: 1.16e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087  21 GGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPLFLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGclrSAFP 100
Cdd:pfam10539   1 GGVIFMCNGKTKPECFRYQLFGLPAGHKDFVKKIKPGLPLFLFDYDLRLLYGIFEAASDGGMNIEPYAFTSSG---GPFP 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1142826087 101 AQVRICTKTRYPPLLESQFKTLLGDNYYNHHHFYFELDHAQTRALISLF 149
Cdd:pfam10539  78 AQVRFKIRKDCLPLPESEFKPAIKDNYYTKNKFRFELSHAQVRKLLSLF 126
DCD smart00767
DCD is a plant specific domain in proteins involved in development and programmed cell death; ...
 18-151 1.75e-69

DCD is a plant specific domain in proteins involved in development and programmed cell death; The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone.


Pssm-ID: 214811  Cd Length: 132  Bit Score: 223.68  E-value: 1.75e-69
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087   18 NQLGGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPLFLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGclRS 97
Cdd:smart00767   1 ETLGGYIFMCNNDTKEECFRRQLFGLPRGYRDFVRNIKPGLPLFLYNYDTRKLHGIFEATSFGGLNIDPNAFEGKK--ES 78

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1142826087   98 AFPAQVRICTKTRYPPLLESQFKTLLGDNYYNHHHFYFELDHAQTRALISLFKS 151
Cdd:smart00767  79 RFPAQVRFRIRKDCKPLPESEFRSAILENYDGPSKFRFELSHAQVLRLLDLFAP 132
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
482-732 8.30e-51

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 178.43  E-value: 8.30e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 482 LTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAG-ICLNEKIYAIGGGDGN--- 557
Cdd:COG3055     6 LPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPGPPRHHAAaVAQDGKLYVFGGFTGAnps 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 558 -EFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLT 636
Cdd:COG3055    86 sTPLNDVYVYDPATNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAAA 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 637 VLGD-TLYAMGGYDGdkmvssveiyDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSvqmLDTVEVYNASSG-W 714
Cdd:COG3055   166 VLPDgKILVIGGRNG----------SGFSNTWTTLAPLPTARAGHAAAVLGGKILVFGGESGF---SDEVEAYDPATNtW 232

                         250
                  ....*....|....*...
gi 1142826087 715 SVLGSSSIGMRSFASAVV 732
Cdd:COG3055   233 TALGELPTPRHGHAAVLT 250
PHA03098 PHA03098
kelch-like protein; Provisional
 494-715 6.58e-28

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 118.72  E-value: 6.58e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 494 AAVLDGHIFAFGGGDG-MSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKIYAIGGGDGNEFYSEVEIFDPYLGK 572
Cdd:PHA03098  290 SVVLNNVIYFIGGMNKnNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 573 WICSPSMLTSRFALAASGLNGVIYTSGGYDGNMY-LKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGGY--- 648
Cdd:PHA03098  370 WREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDElLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGIsyi 449

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1142826087 649 DGDKMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSVQMlDTVEVYNASSG-WS 715
Cdd:PHA03098  450 DNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYI-NEIEVYDDKTNtWT 516
Kelch smart00612
Kelch domain;
594-640 7.51e-13

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 63.35  E-value: 7.51e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1142826087  594 VIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGD 640
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 488-533 1.53e-12

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 62.24  E-value: 1.53e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1142826087 488 PRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMN 533
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch smart00612
Kelch domain;
454-499 3.93e-08

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 49.86  E-value: 3.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1142826087  454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMSSPRSYASAAVLDG 499
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
 
Name Accession Description Interval E-value
Dev_Cell_Death pfam10539
Development and cell death domain; The DCD domain is found in plant proteins involved in ...
 21-149 1.16e-71

Development and cell death domain; The DCD domain is found in plant proteins involved in development and cell death. The DCD domain is an approximately 130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N-terminus and a PAQV and a PLxE motif towards the C-terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognisable motifs, like the KELCH repeats or the ParB domain.


Pssm-ID: 463141  Cd Length: 126  Bit Score: 228.94  E-value: 1.16e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087  21 GGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPLFLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGclrSAFP 100
Cdd:pfam10539   1 GGVIFMCNGKTKPECFRYQLFGLPAGHKDFVKKIKPGLPLFLFDYDLRLLYGIFEAASDGGMNIEPYAFTSSG---GPFP 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1142826087 101 AQVRICTKTRYPPLLESQFKTLLGDNYYNHHHFYFELDHAQTRALISLF 149
Cdd:pfam10539  78 AQVRFKIRKDCLPLPESEFKPAIKDNYYTKNKFRFELSHAQVRKLLSLF 126
DCD smart00767
DCD is a plant specific domain in proteins involved in development and programmed cell death; ...
 18-151 1.75e-69

DCD is a plant specific domain in proteins involved in development and programmed cell death; The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone.


Pssm-ID: 214811  Cd Length: 132  Bit Score: 223.68  E-value: 1.75e-69
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087   18 NQLGGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPLFLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGclRS 97
Cdd:smart00767   1 ETLGGYIFMCNNDTKEECFRRQLFGLPRGYRDFVRNIKPGLPLFLYNYDTRKLHGIFEATSFGGLNIDPNAFEGKK--ES 78

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1142826087   98 AFPAQVRICTKTRYPPLLESQFKTLLGDNYYNHHHFYFELDHAQTRALISLFKS 151
Cdd:smart00767  79 RFPAQVRFRIRKDCKPLPESEFRSAILENYDGPSKFRFELSHAQVLRLLDLFAP 132
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
482-732 8.30e-51

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 178.43  E-value: 8.30e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 482 LTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAG-ICLNEKIYAIGGGDGN--- 557
Cdd:COG3055     6 LPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPGPPRHHAAaVAQDGKLYVFGGFTGAnps 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 558 -EFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLT 636
Cdd:COG3055    86 sTPLNDVYVYDPATNTWTKLAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAAA 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 637 VLGD-TLYAMGGYDGdkmvssveiyDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSvqmLDTVEVYNASSG-W 714
Cdd:COG3055   166 VLPDgKILVIGGRNG----------SGFSNTWTTLAPLPTARAGHAAAVLGGKILVFGGESGF---SDEVEAYDPATNtW 232

                         250
                  ....*....|....*...
gi 1142826087 715 SVLGSSSIGMRSFASAVV 732
Cdd:COG3055   233 TALGELPTPRHGHAAVLT 250
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
454-709 1.32e-46

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 166.87  E-value: 1.32e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMS-SPRSYASAAVLDGHIFAFGGGDGMSW----YNTVECYSSRNNEWTE 528
Cdd:COG3055    25 VYVAGGLSGGSASNSFEVYDPATNTWSELAPLPgPPRHHAAAVAQDGKLYVFGGFTGANPsstpLNDVYVYDPATNTWTK 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 529 CPSMNQKKGSLAGICLNEKIYAIGGGDGNEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGL-NGVIYTSGGYDGNMYL 607
Cdd:COG3055   105 LAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAAAVLpDGKILVIGGRNGSGFS 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 608 KSaerydpregfWVRLPSMSTRRGSHTLTVLGDTLYAMGGYDGdkMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDD 687
Cdd:COG3055   185 NT----------WTTLAPLPTARAGHAAAVLGGKILVFGGESG--FSDEVEAYDPATNTWTALGELPTPRHGHAAVLTDG 252

                         250       260
                  ....*....|....*....|....*
gi 1142826087 688 SLFLIGGMQS---SVQMLDTVEVYN 709
Cdd:COG3055   253 KVYVIGGETKpgvRTPLVTSAEVYD 277
PHA03098 PHA03098
kelch-like protein; Provisional
 494-715 6.58e-28

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 118.72  E-value: 6.58e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 494 AAVLDGHIFAFGGGDG-MSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKIYAIGGGDGNEFYSEVEIFDPYLGK 572
Cdd:PHA03098  290 SVVLNNVIYFIGGMNKnNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 573 WICSPSMLTSRFALAASGLNGVIYTSGGYDGNMY-LKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGGY--- 648
Cdd:PHA03098  370 WREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDElLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGIsyi 449

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1142826087 649 DGDKMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSVQMlDTVEVYNASSG-WS 715
Cdd:PHA03098  450 DNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYI-NEIEVYDDKTNtWT 516
PHA03098 PHA03098
kelch-like protein; Provisional
 454-667 7.69e-27

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 115.25  E-value: 7.69e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 454 IFLIGGYNG----VTWLSSLDSFSPEKDAVlglTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTEC 529
Cdd:PHA03098  297 IYFIGGMNKnnlsVNSVVSYDTKTKSWNKV---PELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREE 373

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 530 PSMNQKKGSLAGICLNEKIYAIGGGDGN-EFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGGY---DGNM 605
Cdd:PHA03098  374 PPLIFPRYNPCVVNVNNLIYVIGGISKNdELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGIsyiDNIK 453

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1142826087 606 YLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGGYDGDKMVSSVEIYDPSLNAW 667
Cdd:PHA03098  454 VYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515
PHA03098 PHA03098
kelch-like protein; Provisional
 519-733 7.17e-23

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 103.31  E-value: 7.17e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 519 YSSRNNEWTECPSM--NQKKGSLAGICLNEKIYAIGGGDG-NEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVI 595
Cdd:PHA03098  266 YITNYSPLSEINTIidIHYVYCFGSVVLNNVIYFIGGMNKnNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRI 345

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 596 YTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGG-YDGDKMVSSVEIYDPSLNAWRIGDPMN 674
Cdd:PHA03098  346 YVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGiSKNDELLKTVECFSLNTNKWSKGSPLP 425

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1142826087 675 TPRGYAAAVYLDDSLFLIGGMQ--SSVQMLDTVEVYNASSG-WSVLgSSSIGMRSFASAVVL 733
Cdd:PHA03098  426 ISHYGGCAIYHDGKIYVIGGISyiDNIKVYNIVESYNPVTNkWTEL-SSLNFPRINASLCIF 486
Kelch smart00612
Kelch domain;
594-640 7.51e-13

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 63.35  E-value: 7.51e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1142826087  594 VIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGD 640
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
Kelch smart00612
Kelch domain;
642-687 1.27e-12

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 62.58  E-value: 1.27e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1142826087  642 LYAMGGYDGDKMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDD 687
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 488-533 1.53e-12

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 62.24  E-value: 1.53e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1142826087 488 PRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMN 533
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
PHA02790 PHA02790
Kelch-like protein; Provisional
 501-716 7.29e-11

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 65.06  E-value: 7.29e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 501 IFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKIYAIGGGDGNefySEVEIFDPYLGKWICSPSML 580
Cdd:PHA02790  274 VYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNP---TSVERWFHGDAAWVNMPSLL 350

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 581 TSRFALAASGLNGVIYTSGGYDGNMylKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGgydgdkmvSSVEIY 660
Cdd:PHA02790  351 KPRCNPAVASINNVIYVIGGHSETD--TTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG--------RNAEFY 420

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1142826087 661 DPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSvQMLDTVEVYNASS-GWSV 716
Cdd:PHA02790  421 CESSNTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRG-SYIDTIEVYNNRTySWNI 476
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 629-674 4.14e-10

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 55.31  E-value: 4.14e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1142826087 629 RRGSHTLTVLGDTLYAMGGYDGDKMVSSVEIYDPSLNAWRIGDPMN 674
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
PHA02790 PHA02790
Kelch-like protein; Provisional
 392-671 1.62e-09

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 60.83  E-value: 1.62e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 392 RTEALEKKLIGSDKEILSLREIFKDSGRKVQQLEYIVDELQFKLDSsLAHLGNMC-NTLATPSIFLIGGYNGVTWLSSLD 470
Cdd:PHA02790  212 RSNYLSPRGINNVKWILDCTKIFHCDKQPRKSYKYPFIEYPMNMDQ-IIDIFHMCtSTHVGEVVYLIGGWMNNEIHNNAI 290

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 471 SFSPEKDAVLGLTPMSSPRSYASAAVLDGHIFAFGggdGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKIYA 550
Cdd:PHA02790  291 AVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVG---GLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYV 367

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 551 IGGgdGNEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGgydgnmylKSAERYDPREGFWVRLPSMSTRR 630
Cdd:PHA02790  368 IGG--HSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG--------RNAEFYCESSNTWTLIDDPIYPR 437

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1142826087 631 GSHTLTVLGDTLYAMGGYDGDKMVSSVEIYDPSLNAWRIGD 671
Cdd:PHA02790  438 DNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYSWNIWD 478
PHA02713 PHA02713
hypothetical protein; Provisional
 424-553 6.11e-09

hypothetical protein; Provisional


Pssm-ID: 165086 [Multi-domain]  Cd Length: 557  Bit Score: 59.25  E-value: 6.11e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 424 LEYIVDELQFKLDSSLA-HLGNMCNTLATPSIFLIGGYN-GVTWLSSLDSFSPEKDAVLGLTPMSSPRSYASAAVLDGHI 501
Cdd:PHA02713  275 LVYNINTMEYSVISTIPnHIINYASAIVDNEIIIAGGYNfNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTI 354

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1142826087 502 FAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKIYAIGG 553
Cdd:PHA02713  355 YAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGG 406
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 583-627 1.15e-08

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 51.46  E-value: 1.15e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1142826087 583 RFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMS 627
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch smart00612
Kelch domain;
547-593 1.74e-08

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 51.02  E-value: 1.74e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1142826087  547 KIYAIGGGDGNEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNG 593
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
Kelch smart00612
Kelch domain;
500-543 2.82e-08

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 50.25  E-value: 2.82e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1142826087  500 HIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKgSLAGIC 543
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPR-SGHGVA 43
Kelch smart00612
Kelch domain;
454-499 3.93e-08

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 49.86  E-value: 3.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1142826087  454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMSSPRSYASAAVLDG 499
Cdd:smart00612   2 IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING 47
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
666-733 1.10e-07

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 54.01  E-value: 1.10e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1142826087 666 AWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSvQMLDTVEVYN-ASSGWSVLGSSSIGMRSFASAVVL 733
Cdd:COG3055     2 TWSSLPDLPTPRSEAAAALLDGKVYVAGGLSGG-SASNSFEVYDpATNTWSELAPLPGPPRHHAAAVAQ 69
PHA02790 PHA02790
Kelch-like protein; Provisional
 544-693 2.40e-07

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 53.89  E-value: 2.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 544 LNEKIYAIGGGDGNEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGGYDGNmylKSAERYDPREGFWVRL 623
Cdd:PHA02790  270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNP---TSVERWFHGDAAWVNM 346

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 624 PSMSTRRGSHTLTVLGDTLYAMGGYdgDKMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIG 693
Cdd:PHA02790  347 PSLLKPRCNPAVASINNVIYVIGGH--SETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG 414
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
 543-579 1.83e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 45.30  E-value: 1.83e-06
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1142826087 543 CLNEKIYAIGGGDGNEFYSEVEIFDPYLGKWICSPSM 579
Cdd:pfam01344   9 VVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSM 45
Kelch_6 pfam13964
Kelch motif;
488-533 2.66e-06

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 45.02  E-value: 2.66e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1142826087 488 PRSYASAAVLDGHIFAFGGGDGMS-WYNTVECYSSRNNEWTECPSMN 533
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGYTNASpALNKLEVYNPLTKSWEELPPLP 47
Kelch_6 pfam13964
Kelch motif;
633-677 5.90e-06

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 43.86  E-value: 5.90e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1142826087 633 HTLTVLGDTLYAMGGYDGDKMVSS-VEIYDPSLNAWRIGDPMNTPR 677
Cdd:pfam13964   5 HSVVSVGGYIYVFGGYTNASPALNkLEVYNPLTKSWEELPPLPTPR 50
PHA02713 PHA02713
hypothetical protein; Provisional
 587-712 7.90e-06

hypothetical protein; Provisional


Pssm-ID: 165086 [Multi-domain]  Cd Length: 557  Bit Score: 49.24  E-value: 7.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 587 AASGLNGVIYTSGGYD-GNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGGYDGDKMVSSVEIYDPSLN 665
Cdd:PHA02713  298 ASAIVDNEIIIAGGYNfNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDD 377

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1142826087 666 AWRIGDPMNTPRGYAAAVYLDDSLFLIGGmqsSVQMLDTVEVYNASS 712
Cdd:PHA02713  378 KWKMLPDMPIALSSYGMCVLDQYIYIIGG---RTEHIDYTSVHHMNS 421
PLN02193 PLN02193
nitrile-specifier protein
 453-596 1.89e-05

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 47.64  E-value: 1.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 453 SIFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMS---SPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTEC 529
Cdd:PLN02193  230 TLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHC 309

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1142826087 530 P----SMNQKKGslAGI-CLNEKIYAIGGGDGNEFySEVEIFDPYLGKWI------CSPSMlTSRFALAASGLNGVIY 596
Cdd:PLN02193  310 StpgdSFSIRGG--AGLeVVQGKVWVVYGFNGCEV-DDVHYYDPVQDKWTqvetfgVRPSE-RSVFASAAVGKHIVIF 383
Kelch_4 pfam13418
Galactose oxidase, central domain;
676-720 5.39e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 41.06  E-value: 5.39e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1142826087 676 PRGYAAAVYL-DDSLFLIGGMQSSVQMLDTVEVYNASSG-WSVLGSS 720
Cdd:pfam13418   1 PRAYHTSTSIpDDTIYLFGGEGEDGTLLSDLWVFDLSTNeWTRLGSL 47
PLN02153 PLN02153
epithiospecifier protein
 454-596 2.77e-04

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 43.82  E-value: 2.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMS-----SPRSYASAAVLDGHIFAFGG---GDGMSW---YNTVECYSSR 522
Cdd:PLN02153   88 LYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDeeggpEARTFHSMASDENHVYVFGGvskGGLMKTperFRTIEAYNIA 167

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 523 NNEWTECPSMN---QKKGSLAGICLNEKIYAIGG-------GDGNEFYSE-VEIFDPYLGKWI------CSPSMlTSRFA 585
Cdd:PLN02153  168 DGKWVQLPDPGenfEKRGGAGFAVVQGKIWVVYGfatsilpGGKSDYESNaVQFFDPASGKWTevettgAKPSA-RSVFA 246

                         170
                  ....*....|.
gi 1142826087 586 LAASGLNGVIY 596
Cdd:PLN02153  247 HAVVGKYIIIF 257
PLN02193 PLN02193
nitrile-specifier protein
 638-709 7.49e-04

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 42.64  E-value: 7.49e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1142826087 638 LGDTLYAMGGYDGDKMVSSVEIYDPSLNAWRIGDPMN---TPRGYAAAVYLDDSLFLIGGMQSSVQmLDTVEVYN 709
Cdd:PLN02193  227 IGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEegpTPRSFHSMAADEENVYVFGGVSATAR-LKTLDSYN 300
PRK14131 PRK14131
N-acetylneuraminate epimerase;
459-570 1.72e-03

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 41.54  E-value: 1.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 459 GYNGVTWLSsLDSFSPEKDAVLGLTPMSSPRSYASAAVLDGHIFAFGG-GDGMS-----WYNTVECYSSRNNEWTECPSm 532
Cdd:PRK14131   46 GSAGTSWYK-LDLNAPSKGWTKIAAFPGGPREQAVAAFIDGKLYVFGGiGKTNSegspqVFDDVYKYDPKTNSWQKLDT- 123

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1142826087 533 nQKKGSLAG----ICLNEKIYAIGGgdgnefYSEvEIFDPYL 570
Cdd:PRK14131  124 -RSPVGLAGhvavSLHNGKAYITGG------VNK-NIFDGYF 157
PHA03098 PHA03098
kelch-like protein; Provisional
 441-539 3.17e-03

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 40.91  E-value: 3.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1142826087 441 HLGNMCNTLATPSIFLIGGY---NGVTWLSSLDSFSPEKDAVLGLTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVE 517
Cdd:PHA03098  427 SHYGGCAIYHDGKIYVIGGIsyiDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIE 506

                          90       100
                  ....*....|....*....|..
gi 1142826087 518 CYSSRNNEWTECPSMNQKKGSL 539
Cdd:PHA03098  507 VYDDKTNTWTLFCKFPKVIGSL 528
Kelch_4 pfam13418
Galactose oxidase, central domain;
629-673 6.98e-03

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 35.28  E-value: 6.98e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1142826087 629 RRGSHTLTVLG-DTLYAMGGYDGD-KMVSSVEIYDPSLNAWRIGDPM 673
Cdd:pfam13418   1 PRAYHTSTSIPdDTIYLFGGEGEDgTLLSDLWVFDLSTNEWTRLGSL 47
Kelch_3 pfam13415
Galactose oxidase, central domain;
639-685 7.67e-03

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 34.96  E-value: 7.67e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1142826087 639 GDTLYAMGGYDGD--KMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYL 685
Cdd:pfam13415   1 GDKLYIFGGLGFDgqTRLNDLYVYDLDTNTWTQIGDLPPPRSGHSATYI 49
PHA02790 PHA02790
Kelch-like protein; Provisional
 634-695 9.37e-03

Kelch-like protein; Provisional


Pssm-ID: 165153 [Multi-domain]  Cd Length: 480  Bit Score: 39.26  E-value: 9.37e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1142826087 634 TLTVLGDTLYAMGGYDGDKMVSSVEIYDPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGM 695
Cdd:PHA02790  266 TSTHVGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGL 327
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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