|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
142-645 |
8.53e-20 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 95.39 E-value: 8.53e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 142 SPESPKPTPltPLEPQKPGSVVSPELQTPLPSPEPSKPAsVSSPEPPKSVPVCESQKLAPV------PSPEPQKPAPVSP 215
Cdd:PHA03247 2545 SDDAGDPPP--PLPPAAPPAAPDRSVPPPRPAPRPSEPA-VTSRARRPDAPPQSARPRAPVddrgdpRGPAPPSPLPPDT 2621
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 216 esvkATLSNPKPQKQSHFPETLGPPSasspespvlAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKP--- 292
Cdd:PHA03247 2622 ----HAPDPPPPSPSPAANEPDPHPP---------PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRraa 2688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 293 FPAVS-------PEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSP----GPWKPI-PSVSPGPWK 360
Cdd:PHA03247 2689 RPTVGsltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPatpgGPARPArPPTTAGPPA 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 361 PTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEhwKAVPPVSPELRKPGPPLSPEIRSPAGSPELR 440
Cdd:PHA03247 2769 PAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPA--AALPPAASPAGPLPPPTSAQPTAPPPPPGPP 2846
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 441 KPSGSPDLW---------KLSPDQRKTSPASLDFPESQKSSRGGSPDLWKSsfFIEPQKPVFPETRKPGPSGPSESPKAa 511
Cdd:PHA03247 2847 PPSLPLGGSvapggdvrrRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES--FALPPDQPERPPQPQAPPPPQPQPQP- 2923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 512 sdiwKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFP---ELPKSaLFSESQKAVELGD-------E 581
Cdd:PHA03247 2924 ----PPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPgrvAVPRF-RVPQPAPSREAPAsstppltG 2998
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 582 LQIDAIDDQKCDILVQEELLASPKKLLEdTLFPSSkklkkDNQESSDAELSSSEYIKTDLDAMD 645
Cdd:PHA03247 2999 HSLSRVSSWASSLALHEETDPPPVSLKQ-TLWPPD-----DTEDSDADSLFDSDSERSDLEALD 3056
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
173-427 |
2.17e-14 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 76.73 E-value: 2.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 173 SPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPvspeSVKATLSNPKPQkqshfpetlgppsasspespvlaA 252
Cdd:NF033839 280 TQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKP----EVKPQLEKPKPE-----------------------V 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 253 SPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSg 332
Cdd:NF033839 333 KPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKP- 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 333 pwKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSvspsswksppaspeswkSGPPELRKTAPTLSPEHWKAV 412
Cdd:NF033839 412 --QPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP-----------------EVKPQPETPKPEVKPQPEKPK 472
|
250
....*....|....*
gi 114149935 413 PPVSPELRKPGPPLS 427
Cdd:NF033839 473 PEVKPQPEKPKPDNS 487
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
86-340 |
3.18e-14 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 76.35 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 86 ASPDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSP 165
Cdd:NF033839 266 ADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKP 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 166 ELQTPLPS--PEPSKPASVSSPEPPKSVPVCESQKLAPVPS--PEPQKPAPvspeSVKATLSNPKPQkqshfpetlgpps 241
Cdd:NF033839 346 QLETPKPEvkPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEvkPQPEKPKP----EVKPQPEKPKPE------------- 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 242 asspespvlaASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPR 321
Cdd:NF033839 409 ----------VKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQ 478
|
250
....*....|....*....
gi 114149935 322 PWKSNPSASSGPWKPAKPA 340
Cdd:NF033839 479 PEKPKPDNSKPQADDKKPS 497
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
138-542 |
7.83e-11 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 65.56 E-value: 7.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 138 GSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPlpSPEPSKPASVSSPEPPK-SVPVCESQKLAPVPSPEPQKPAPVSPE 216
Cdd:NF033839 154 GSSTKPETPQPENPEHQKPTTPAPDTKPSPQPE--GKKPSVPDINQEKEKAKlAVATYMSKILDDIQKHHLQKEKHRQIV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 217 SVKATLSNPKPQKQSHFpETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAV 296
Cdd:NF033839 232 ALIKELDELKKQALSEI-DNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEV 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 297 SPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSAssgPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPsvssaswksssvs 376
Cdd:NF033839 311 KPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEV---KPQLETPKPEVKPQPEKPKPEVKPQPEKPKP------------- 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 377 psswksppaspeswkSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEirspagsPELRKPSGSPDLWKLSPDqr 456
Cdd:NF033839 375 ---------------EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ-------PEKPKPEVKPQPEKPKPE-- 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 457 ktspasldfpesqkssrggspdlwkssffIEPQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAK 536
Cdd:NF033839 431 -----------------------------VKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEK 481
|
....*.
gi 114149935 537 TAPPAS 542
Cdd:NF033839 482 PKPDNS 487
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
94-353 |
7.67e-09 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 59.01 E-value: 7.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 94 KPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPS 173
Cdd:NF033839 296 KPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 174 --PEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQ--------KPAPVSP-ESVKATLSNPKPQkqshfpetlgppsa 242
Cdd:NF033839 376 vkPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQpekpkpevKPQPEKPkPEVKPQPEKPKPE-------------- 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 243 sspespvlaASPEPWGPSPaaspesrksarTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSpgswKPGPPGSPRP 322
Cdd:NF033839 442 ---------VKPQPEKPKP-----------EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNS----KPQADDKKPS 497
|
250 260 270
....*....|....*....|....*....|.
gi 114149935 323 WKSNPSASSGPWKPAKPAPSVSPGPWKPIPS 353
Cdd:NF033839 498 TPNNLSKDKQPSNQASTNEKATNKPKKSLPS 528
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
157-540 |
1.11e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.46 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 157 QKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKqshfpet 236
Cdd:pfam03154 169 TQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQR------- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 237 lgppsaSSPESPVLAASPEPwGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPaVSPEPRRPAPAVSPGSWKPGP 316
Cdd:pfam03154 242 ------LPSPHPPLQPMTQP-PPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHP-VPPQPFPLTPQSSQSQVPPGP 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 317 ----PGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPeswKS 392
Cdd:pfam03154 314 spaaPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNS---NL 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 393 GPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPeirSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKS- 471
Cdd:pfam03154 391 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPP---PPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPf 467
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 472 SRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPP 540
Cdd:pfam03154 468 VPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPP 536
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
172-556 |
1.75e-06 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 51.31 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 172 PSPEPSKPASVSSPEPPKSVPVCESQKLAPVP--SPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPV 249
Cdd:NF033839 162 PQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPdiNQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELK 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 250 LAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPrpwksnpsa 329
Cdd:NF033839 242 KQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP--------- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 330 ssgpwKPAKPAPSVSPGPWKPIPSVSPGPWKPTPsvssaswksssvspsswksppaspeswkSGPPELRKTAPTLSPEHW 409
Cdd:NF033839 313 -----EPETPKPEVKPQLEKPKPEVKPQPEKPKP----------------------------EVKPQLETPKPEVKPQPE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 410 KAVPPVSPELRKPGPPLSPEirspagsPELRKPSGSPDLWKLSPDqrktspasldfpesqkssrggspdlwkssffIEPQ 489
Cdd:NF033839 360 KPKPEVKPQPEKPKPEVKPQ-------PETPKPEVKPQPEKPKPE-------------------------------VKPQ 401
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 490 KPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAP--PASPEARKRALFPEPRK 556
Cdd:NF033839 402 PEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPevKPQPETPKPEVKPQPEK 470
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
88-236 |
1.83e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.14 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 88 PDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPEL 167
Cdd:NF033839 345 PQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 424
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 168 QTPLPS--PEPSKPASVSSPEPPKSVPVCESQKLAPVP--SPEPQKPAP-VSPESVKATLSNPKPQKQSHFPET 236
Cdd:NF033839 425 EKPKPEvkPQPEKPKPEVKPQPEKPKPEVKPQPETPKPevKPQPEKPKPeVKPQPEKPKPDNSKPQADDKKPST 498
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
263-564 |
2.05e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 263 ASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEP-----RRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPA 337
Cdd:NF033839 146 DSSSSSSSGSSTKPETPQPENPEHQKPTTPAPDTKPSPqpegkKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 338 KPAPSVS------PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS-GPPELRKTAPTLSPEHWK 410
Cdd:NF033839 226 KHRQIVAlikeldELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEpGNKKPSAPKPGMQPSPQP 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 411 AVPPVSPELRKPGPPLSPEIRSP----AGSPELRKPSGSPDLWKLSPDQRKTspasldfPESQKSSRGGSPDLWKSSFFI 486
Cdd:NF033839 306 EKKEVKPEPETPKPEVKPQLEKPkpevKPQPEKPKPEVKPQLETPKPEVKPQ-------PEKPKPEVKPQPEKPKPEVKP 378
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 487 EPQKPvfPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFPELP 564
Cdd:NF033839 379 QPETP--KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK 454
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
199-334 |
9.70e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.06 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 199 LAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS---PESPVLAASPEPWGPS--PAASPESRKSART 273
Cdd:NF040712 199 LATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarrRRAGVEQPEDEPVGPGaaPAAEPDEATRDAG 278
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 114149935 274 TSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPgswKPGPPGSPRPWKSNPSASSGPW 334
Cdd:NF040712 279 EPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPA---RPEPPPAPKPKRRRRRASVPSW 336
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
250-325 |
1.60e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 1.60e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114149935 250 LAASPEpwGPSPAASPESRKSARTTSPEP-RKPSPSESPEPwkpfpAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKS 325
Cdd:COG5373 37 LAEAAE--AASAPAEPEPEAAAAATAAAPeAAPAPVPEAPA-----APPAAAEAPAPAAAAPPAEAEPAAAPAAASS 106
|
|
| PTRF_SDPR |
pfam15237 |
PTRF/SDPR family; This family of proteins includes muscle-related coiled-coil protein (MURC), ... |
597-700 |
2.12e-03 |
|
PTRF/SDPR family; This family of proteins includes muscle-related coiled-coil protein (MURC), protein kinase C delta-binding protein (PRKCDBP), polymerase I and transcript release factor (PTRF) and serum deprivation-response protein (SDPR). MURC activates the Rho/ROCK pathway. PRKCDBP appears to act as an immune potentiator. PTRF is involved in caveolae formation and function. SDPR is involved in the targetting of protein kinase Calpha to caveolae.
Pssm-ID: 464578 Cd Length: 250 Bit Score: 40.86 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 597 QEELLASPK-KLL---EDTLFPSSKKLKKDNQESSDAELSSSEYIKTDLDAMDIKGQESSSDQEQVDVESIDFSKENKMD 672
Cdd:pfam15237 95 QAELLKRNKfKVViyqEENEIPSSLSVKKSPEPSKGSEGGSVEGNETEEDTLQPPTVDLSSDEEYEVEEEAEESRAERLK 174
|
90 100
....*....|....*....|....*...
gi 114149935 673 MTSPEQSRNVlqfteeKEAFiSEEEIAK 700
Cdd:pfam15237 175 RSSLKRVDSL------KKAF-SKENMQK 195
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
174-312 |
4.92e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.14 E-value: 4.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 174 PEPSKP----ASVSSPEPPKSVPVCESqkLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS--PES 247
Cdd:NF040712 190 PDFGRPlrplATVPRLAREPADARPEE--VEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPgaAPA 267
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 248 PVLAASPEPWGPSPA-ASPESRKSARTTSPEPRKPSPS---ESPEPWKPFPAVSPEPRRPAPAVSPGSW 312
Cdd:NF040712 268 AEPDEATRDAGEPPApGAAETPEAAEPPAPAPAAPAAPaapEAEEPARPEPPPAPKPKRRRRRASVPSW 336
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
258-347 |
6.15e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.99 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 258 GPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPgSPRPwksnPSASSGPWKPA 337
Cdd:NF041121 17 RAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPP-PPGP----AGAAPGAALPV 91
|
90
....*....|.
gi 114149935 338 K-PAPSVSPGP 347
Cdd:NF041121 92 RvPAPPALPNP 102
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
142-645 |
8.53e-20 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 95.39 E-value: 8.53e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 142 SPESPKPTPltPLEPQKPGSVVSPELQTPLPSPEPSKPAsVSSPEPPKSVPVCESQKLAPV------PSPEPQKPAPVSP 215
Cdd:PHA03247 2545 SDDAGDPPP--PLPPAAPPAAPDRSVPPPRPAPRPSEPA-VTSRARRPDAPPQSARPRAPVddrgdpRGPAPPSPLPPDT 2621
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 216 esvkATLSNPKPQKQSHFPETLGPPSasspespvlAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKP--- 292
Cdd:PHA03247 2622 ----HAPDPPPPSPSPAANEPDPHPP---------PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRraa 2688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 293 FPAVS-------PEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSP----GPWKPI-PSVSPGPWK 360
Cdd:PHA03247 2689 RPTVGsltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPatpgGPARPArPPTTAGPPA 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 361 PTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEhwKAVPPVSPELRKPGPPLSPEIRSPAGSPELR 440
Cdd:PHA03247 2769 PAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPA--AALPPAASPAGPLPPPTSAQPTAPPPPPGPP 2846
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 441 KPSGSPDLW---------KLSPDQRKTSPASLDFPESQKSSRGGSPDLWKSsfFIEPQKPVFPETRKPGPSGPSESPKAa 511
Cdd:PHA03247 2847 PPSLPLGGSvapggdvrrRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES--FALPPDQPERPPQPQAPPPPQPQPQP- 2923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 512 sdiwKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFP---ELPKSaLFSESQKAVELGD-------E 581
Cdd:PHA03247 2924 ----PPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPgrvAVPRF-RVPQPAPSREAPAsstppltG 2998
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 582 LQIDAIDDQKCDILVQEELLASPKKLLEdTLFPSSkklkkDNQESSDAELSSSEYIKTDLDAMD 645
Cdd:PHA03247 2999 HSLSRVSSWASSLALHEETDPPPVSLKQ-TLWPPD-----DTEDSDADSLFDSDSERSDLEALD 3056
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
157-576 |
8.38e-15 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.21 E-value: 8.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 157 QKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSV--------PVCES------------QKLAPVPSPEPQKPAPVSPE 216
Cdd:PHA03247 2481 RRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLapailpdePVGEPvhprmltwirglEELASDDAGDPPPPLPPAAP 2560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 217 SVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASP----EPWGPSPAASPESRKSARTTSPEPRKPSPSESP-EPWK 291
Cdd:PHA03247 2561 PAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPrapvDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAnEPDP 2640
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 292 PFPAVSPEPRRPAPAVSPGswKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWK 371
Cdd:PHA03247 2641 HPPPTVPPPERPRDDPAPG--RVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSA 2718
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 372 SSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSP------EIRSPAGSPELRKPSGS 445
Cdd:PHA03247 2719 TPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPaagpprRLTRPAVASLSESRESL 2798
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 446 PDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPS----------GPSESPKA----- 510
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvapggdvrrrPPSRSPAAkpaap 2878
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 511 ----ASDIWKPVLSIDTE-----------PRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFPELPKSALFSESQKA 575
Cdd:PHA03247 2879 arppVRRLARPAVSRSTEsfalppdqperPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA 2958
|
.
gi 114149935 576 V 576
Cdd:PHA03247 2959 V 2959
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
173-427 |
2.17e-14 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 76.73 E-value: 2.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 173 SPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPvspeSVKATLSNPKPQkqshfpetlgppsasspespvlaA 252
Cdd:NF033839 280 TQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKP----EVKPQLEKPKPE-----------------------V 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 253 SPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSg 332
Cdd:NF033839 333 KPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKP- 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 333 pwKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSvspsswksppaspeswkSGPPELRKTAPTLSPEHWKAV 412
Cdd:NF033839 412 --QPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP-----------------EVKPQPETPKPEVKPQPEKPK 472
|
250
....*....|....*
gi 114149935 413 PPVSPELRKPGPPLS 427
Cdd:NF033839 473 PEVKPQPEKPKPDNS 487
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
86-340 |
3.18e-14 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 76.35 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 86 ASPDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSP 165
Cdd:NF033839 266 ADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKP 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 166 ELQTPLPS--PEPSKPASVSSPEPPKSVPVCESQKLAPVPS--PEPQKPAPvspeSVKATLSNPKPQkqshfpetlgpps 241
Cdd:NF033839 346 QLETPKPEvkPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEvkPQPEKPKP----EVKPQPEKPKPE------------- 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 242 asspespvlaASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPR 321
Cdd:NF033839 409 ----------VKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQ 478
|
250
....*....|....*....
gi 114149935 322 PWKSNPSASSGPWKPAKPA 340
Cdd:NF033839 479 PEKPKPDNSKPQADDKKPS 497
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
104-462 |
1.22e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 75.36 E-value: 1.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 104 DPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPtpltPLEPQKPGsvvspelqTPLPSPEPSKPASVS 183
Cdd:PHA03247 2700 DPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAV----PAGPATPG--------GPARPARPPTTAGPP 2767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 184 SPEPPKsvpvcesqklAPVPSPEPQKPAPVSPESVKATlsnpkpqkqshfpetlgppsasspespvlAASPEPWGPSPAA 263
Cdd:PHA03247 2768 APAPPA----------APAAGPPRRLTRPAVASLSESR-----------------------------ESLPSPWDPADPP 2808
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 264 SPESRKSArtTSPEPRKPSPSESPePWKPFPAVSPEPRRPAPAVSP--GSWKPGPP----GSPRPWKSNPSASSGPWKPA 337
Cdd:PHA03247 2809 AAVLAPAA--ALPPAASPAGPLPP-PTSAQPTAPPPPPGPPPPSLPlgGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRR 2885
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 338 KPAPSVSPGPwKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSP 417
Cdd:PHA03247 2886 LARPAVSRST-ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 114149935 418 ELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPAS 462
Cdd:PHA03247 2965 GALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWAS 3009
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
143-549 |
1.50e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 68.27 E-value: 1.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 143 PESPKPTPLTPLEPQkPGSVVSPelQTPLPSPEPSKPASVSSPEPPKSVPvcesqklAPVPSPEPQKPAPVSPESVKATL 222
Cdd:PHA03307 25 PATPGDAADDLLSGS-QGQLVSD--SAELAAVTVVAGAAACDRFEPPTGP-------PPGPGTEAPANESRSTPTWSLST 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 223 SNPKPQKQSHFPETLGPPSASSPESPVLAASPEPwGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSP-EPR 301
Cdd:PHA03307 95 LAPASPAREGSPTPPGPSSPDPPPPTPPPASPPP-SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSrQAA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 302 RPAPAVSPGSWKPGPPGSPRPWKSNPSAssgpwkpAKPAPSVsPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWK 381
Cdd:PHA03307 174 LPLSSPEETARAPSSPPAEPPPSTPPAA-------ASPRPPR-RSSPISASASSPAPAPGRSAADDAGASSSDSSSSESS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 382 SPPASPESWKSGPPELRKTAPTLSpehWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPdlwklSPDQRKTSPA 461
Cdd:PHA03307 246 GCGWGPENECPLPRPAPITLPTRI---WEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGP-----APSSPRASSS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 462 SLDFPESQKSSRGGSPDLwkssffiePQKPVFPETRKPGPSGPSESPKAASDIWKPvlsidtePRKPALFPEPAKTAPPA 541
Cdd:PHA03307 318 SSSSRESSSSSTSSSSES--------SRGAAVSPGPSPSRSPSPSRPPPPADPSSP-------RKRPRPSRAPSSPAASA 382
|
....*...
gi 114149935 542 SPEARKRA 549
Cdd:PHA03307 383 GRPTRRRA 390
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
118-477 |
4.06e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 67.12 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 118 PCNSAEPKSIPALSMETQKLGSvlSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQ 197
Cdd:PHA03307 61 ACDRFEPPTGPPPGPGTEAPAN--ESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 198 KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPpsasspespvlaaSPEPWGPSPAASPESRKSARTTSPE 277
Cdd:PHA03307 139 RPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPE-------------ETARAPSSPPAEPPPSTPPAAASPR 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 278 PRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGS--------PRPwksNPSASSGPWKPAKPAPSVSPGPWK 349
Cdd:PHA03307 206 PPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCgwgpenecPLP---RPAPITLPTRIWEASGWNGPSSRP 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 350 PIPSVSPGPWKPTPsvssASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPlSPE 429
Cdd:PHA03307 283 GPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPS-RPP 357
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 114149935 430 IRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSP 477
Cdd:PHA03307 358 PPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATG 405
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
138-542 |
7.83e-11 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 65.56 E-value: 7.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 138 GSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPlpSPEPSKPASVSSPEPPK-SVPVCESQKLAPVPSPEPQKPAPVSPE 216
Cdd:NF033839 154 GSSTKPETPQPENPEHQKPTTPAPDTKPSPQPE--GKKPSVPDINQEKEKAKlAVATYMSKILDDIQKHHLQKEKHRQIV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 217 SVKATLSNPKPQKQSHFpETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAV 296
Cdd:NF033839 232 ALIKELDELKKQALSEI-DNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEV 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 297 SPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSAssgPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPsvssaswksssvs 376
Cdd:NF033839 311 KPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEV---KPQLETPKPEVKPQPEKPKPEVKPQPEKPKP------------- 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 377 psswksppaspeswkSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEirspagsPELRKPSGSPDLWKLSPDqr 456
Cdd:NF033839 375 ---------------EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ-------PEKPKPEVKPQPEKPKPE-- 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 457 ktspasldfpesqkssrggspdlwkssffIEPQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAK 536
Cdd:NF033839 431 -----------------------------VKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEK 481
|
....*.
gi 114149935 537 TAPPAS 542
Cdd:NF033839 482 PKPDNS 487
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
102-461 |
9.28e-11 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 65.96 E-value: 9.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 102 ETDPVKSPPLPEHQK-----IPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEP 176
Cdd:PHA03307 68 PTGPPPGPGTEAPANesrstPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 177 SKPASVSSPEPPKSVPVcesqklAPVPSPEPQKPAPVSPESVkATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEP 256
Cdd:PHA03307 148 PAASPPAAGASPAAVAS------DAASSRQAALPLSSPEETA-RAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 257 wGPSPAASPESRKSART---TSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSwkPGPPGSPRPWKSNPSASSGP 333
Cdd:PHA03307 221 -APAPGRSAADDAGASSsdsSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG--PSSRPGPASSSSSPRERSPS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 334 WKPAKPAPSVSPGPWKPIPSVSP----GPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHW 409
Cdd:PHA03307 298 PSPSSPGSGPAPSSPRASSSSSSsresSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 114149935 410 KAVPPVSPELRKPGPPLSPEIRSPAGSPelRKPSGSPDLWKLSPDQRKTSPA 461
Cdd:PHA03307 378 PAASAGRPTRRRARAAVAGRARRRDATG--RFPAGRPRPSPLDAGAASGAFY 427
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
100-356 |
3.94e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 63.65 E-value: 3.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 100 NKETDPVKSPPLPEHQKIPCNSAEPKSIPALSmETQKLGSVLSPESPKPTPLTPLEPQKPGS--VVSPELQTPLPSPEPS 177
Cdd:PHA03307 104 GSPTPPGPSSPDPPPPTPPPASPPPSPAPDLS-EMLRPVGSPGPPPAASPPAAGASPAAVASdaASSRQAALPLSSPEET 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 178 KPASVSspePPKSVPVcesqkLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPE-- 255
Cdd:PHA03307 183 ARAPSS---PPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPEne 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 256 --------------PWGPSPAASPESRKSART--TSPEPRKPSPSESPEPWKPFP--------------AVSPEPRRPAP 305
Cdd:PHA03307 255 cplprpapitlptrIWEASGWNGPSSRPGPASssSSPRERSPSPSPSSPGSGPAPssprasssssssreSSSSSTSSSSE 334
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 114149935 306 AVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSP 356
Cdd:PHA03307 335 SSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRP 385
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
144-359 |
8.09e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 62.59 E-value: 8.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 144 ESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASvsSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLS 223
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAA--APAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 224 NPKPqkqshfpetlGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRP 303
Cdd:PRK12323 449 APAP----------APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 114149935 304 APAVSPGSWKPG---PPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKP----IPSVSPGPW 359
Cdd:PRK12323 519 AGWVAESIPDPAtadPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRAsasgLPDMFDGDW 581
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
176-358 |
1.06e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 62.20 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 176 PSKPASVSSPEPPKSVPVCES-------QKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETL--------GPP 240
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPapaaaapAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALaaarqasaRGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 241 SASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPS-----ESPEPWKPFPAVSPEPRRPAPAVSPGSWKPG 315
Cdd:PRK12323 445 GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAApapadDDPPPWEELPPEFASPAPAQPDAAPAGWVAE 524
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 114149935 316 ppGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Cdd:PRK12323 525 --SIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
155-358 |
3.45e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.38 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 155 EPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPksvpvcesqklaPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFP 234
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAP------------AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVA 658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 235 ETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKP 314
Cdd:PRK07764 659 VPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 114149935 315 GPPgSPRPWkSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Cdd:PRK07764 739 VPL-PPEPD-DPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPS 780
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
94-353 |
7.67e-09 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 59.01 E-value: 7.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 94 KPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPS 173
Cdd:NF033839 296 KPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKPE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 174 --PEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQ--------KPAPVSP-ESVKATLSNPKPQkqshfpetlgppsa 242
Cdd:NF033839 376 vkPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQpekpkpevKPQPEKPkPEVKPQPEKPKPE-------------- 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 243 sspespvlaASPEPWGPSPaaspesrksarTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSpgswKPGPPGSPRP 322
Cdd:NF033839 442 ---------VKPQPEKPKP-----------EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNS----KPQADDKKPS 497
|
250 260 270
....*....|....*....|....*....|.
gi 114149935 323 WKSNPSASSGPWKPAKPAPSVSPGPWKPIPS 353
Cdd:NF033839 498 TPNNLSKDKQPSNQASTNEKATNKPKKSLPS 528
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
150-345 |
4.04e-08 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 57.40 E-value: 4.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 150 PLTPLEPQKPGSVVSPELQTPL----PSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNP 225
Cdd:PRK10263 336 PVEPVTQTPPVASVDVPPAQPTvawqPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 226 KPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAAS---PESRKSARTTSPEPRKPSPSE-SPEPWKPFPAVSPEP- 300
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQStfaPQSTYQTEQTYQQPAAQEPLYqQPQPVEQQPVVEPEPv 495
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 301 -RRPAPAVSP------------------GSWK---PGPPGSPRPWKSNPSASSGP-WKPAKPAPSVSP 345
Cdd:PRK10263 496 vEETKPARPPlyyfeeveekrarereqlAAWYqpiPEPVKEPEPIKSSLKAPSVAaVPPVEAAAAVSP 563
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
86-446 |
4.26e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 57.10 E-value: 4.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 86 ASPDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPAlsmetqklgsvlspespkptpltplepqkpGSVVSP 165
Cdd:PHA03307 121 PPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVAS------------------------------DAASSR 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 166 ELQTPLPSPEPSKPASVSspePPKSVPVcesqkLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSP 245
Cdd:PHA03307 171 QAALPLSSPEETARAPSS---PPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSS 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 246 ESPVLAASPEPWGPSPAASPESRKSArttspePRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSwKPGPPGSPRPWKS 325
Cdd:PHA03307 243 ESSGCGWGPENECPLPRPAPITLPTR------IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSS-PGSGPAPSSPRAS 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 326 NPSASSGPWKPAKPAPSvSPGPWKPIPSVSPGPWK-PTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTL 404
Cdd:PHA03307 316 SSSSSSRESSSSSTSSS-SESSRGAAVSPGPSPSRsPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAV 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 114149935 405 SP-EHWKAVPPVSPELRKPGPPLSPEIRSPAGSPE--LRKPSGSP 446
Cdd:PHA03307 395 AGrARRRDATGRFPAGRPRPSPLDAGAASGAFYARypLLTPSGEP 439
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
105-289 |
8.78e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 8.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 105 PVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLE---PQKPGSVVSPElQTPLPSPEPSKPAS 181
Cdd:PRK12323 387 PAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARqasARGPGGAPAPA-PAPAAAPAAAARPA 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 182 VSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSP 261
Cdd:PRK12323 466 AAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAP 545
|
170 180
....*....|....*....|....*....
gi 114149935 262 AASPESRKSARTTS-PEPRKPSPSESPEP 289
Cdd:PRK12323 546 AAAPAPRAAAATEPvVAPRPPRASASGLP 574
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
159-346 |
2.03e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 54.86 E-value: 2.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 159 PGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVcesqKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLG 238
Cdd:PRK07003 368 PGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAV----TGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAA 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 239 PPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPW--KPFPAVSPEPRRPA-PAVSPGSWKPG 315
Cdd:PRK07003 444 DGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRaaAPSAATPAAVPDARaPAAASREDAPA 523
|
170 180 190
....*....|....*....|....*....|.
gi 114149935 316 PPGSPRPwksnpsaSSGPWKPAKPAPSVSPG 346
Cdd:PRK07003 524 AAAPPAP-------EARPPTPAAAAPAARAG 547
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
182-363 |
5.85e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.07 E-value: 5.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 182 VSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATlsnPKPQKQSHFPEtlgppsaSSPESPVLAASPEPWGPSP 261
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAA---PAPAGAAAAPA-------EASAAPAPGVAAPEHHPKH 656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 262 AASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAP 341
Cdd:PRK07764 657 VAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAAD 736
|
170 180
....*....|....*....|....
gi 114149935 342 SVSPGPWKP--IPSVSPGPWKPTP 363
Cdd:PRK07764 737 DPVPLPPEPddPPDPAGAPAQPPP 760
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
155-417 |
9.76e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 52.78 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 155 EPQKPGSVVSPELQTPLPSPEPSKP-ASVSSPEPPKSVPVCESQklapvPSPEPQKPAPV---SPESVKATLSNPKPQKQ 230
Cdd:PRK10263 318 EPVAVAAAATTATQSWAAPVEPVTQtPPVASVDVPPAQPTVAWQ-----PVPGPQTGEPViapAPEGYPQQSQYAQPAVQ 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 231 SHfpetlgppsasspespvlaaspEPWgpSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPApavSPG 310
Cdd:PRK10263 393 YN----------------------EPL--QQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPV---AGN 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 311 SWKPGPPGSPRPWKSNPSASSGPWKPAKPAPS-VSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPES 389
Cdd:PRK10263 446 AWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLyQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAA 525
|
250 260 270
....*....|....*....|....*....|..
gi 114149935 390 WKSGPPELRK----TAPTLSPEHWKAVPPVSP 417
Cdd:PRK10263 526 WYQPIPEPVKepepIKSSLKAPSVAAVPPVEA 557
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
251-446 |
1.03e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 251 AASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPfPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSAs 330
Cdd:PRK12323 377 AAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA-VAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP- 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 331 sgpwkPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSwksppaspesWKSGPPELRKTAPTLS---PE 407
Cdd:PRK12323 455 -----AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP----------WEELPPEFASPAPAQPdaaPA 519
|
170 180 190
....*....|....*....|....*....|....*....
gi 114149935 408 HWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSP 446
Cdd:PRK12323 520 GWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATE 558
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
157-540 |
1.11e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.46 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 157 QKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKqshfpet 236
Cdd:pfam03154 169 TQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQR------- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 237 lgppsaSSPESPVLAASPEPwGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPaVSPEPRRPAPAVSPGSWKPGP 316
Cdd:pfam03154 242 ------LPSPHPPLQPMTQP-PPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHP-VPPQPFPLTPQSSQSQVPPGP 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 317 ----PGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPeswKS 392
Cdd:pfam03154 314 spaaPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNS---NL 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 393 GPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPeirSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKS- 471
Cdd:pfam03154 391 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPP---PPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPf 467
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 472 SRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPP 540
Cdd:pfam03154 468 VPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPP 536
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
172-556 |
1.75e-06 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 51.31 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 172 PSPEPSKPASVSSPEPPKSVPVCESQKLAPVP--SPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPV 249
Cdd:NF033839 162 PQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPdiNQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELK 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 250 LAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPrpwksnpsa 329
Cdd:NF033839 242 KQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP--------- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 330 ssgpwKPAKPAPSVSPGPWKPIPSVSPGPWKPTPsvssaswksssvspsswksppaspeswkSGPPELRKTAPTLSPEHW 409
Cdd:NF033839 313 -----EPETPKPEVKPQLEKPKPEVKPQPEKPKP----------------------------EVKPQLETPKPEVKPQPE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 410 KAVPPVSPELRKPGPPLSPEirspagsPELRKPSGSPDLWKLSPDqrktspasldfpesqkssrggspdlwkssffIEPQ 489
Cdd:NF033839 360 KPKPEVKPQPEKPKPEVKPQ-------PETPKPEVKPQPEKPKPE-------------------------------VKPQ 401
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 490 KPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAP--PASPEARKRALFPEPRK 556
Cdd:NF033839 402 PEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPevKPQPETPKPEVKPQPEK 470
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
121-357 |
2.29e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.33 E-value: 2.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 121 SAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPepSKPASVSSPEPPKSVPVCESQKLA 200
Cdd:PHA03307 231 DAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGP--ASSSSSPRERSPSPSPSSPGSGPA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 201 PVPSPEPQKPAPVSPESVKATLSNPKPQKQshfpetlgppsasspespvlAASPEPWGPSPAASPeSRKSARTTSPEPRK 280
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRG--------------------AAVSPGPSPSRSPSP-SRPPPPADPSSPRK 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 281 PSPSESPEPWKPFPAVSPEPRRPAPAVSP---GSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPG--PWKPIPSVS 355
Cdd:PHA03307 368 RPRPSRAPSSPAASAGRPTRRRARAAVAGrarRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSPPPP 447
|
..
gi 114149935 356 PG 357
Cdd:PHA03307 448 PG 449
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
127-508 |
2.52e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 51.22 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 127 IPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPElQTPLPSPEPSKPASVSSPE----PPKSVPVcESQKLAPV 202
Cdd:PHA03378 564 LPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPS-QTPEPPTTQSHIPETSAPRqwpmPLRPIPM-RPLRMQPI 641
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 203 PSPEPQKPAPVSPESVKATLSNPKPQKQSHF---PETLGPPSASSPESPVLAASPEPWGPSPAASPESrksarttSPEPR 279
Cdd:PHA03378 642 TFNVLVFPTPHQPPQVEITPYKPTWTQIGHIpyqPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAA-------PPGRA 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 280 KPsPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPW-KPAKPAPSVSP-GPWKPI--PSVS 355
Cdd:PHA03378 715 QR-PAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAaAPGAPTPQPPPqAPPAPQqrPRGA 793
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 356 PGPWK-----PTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKtaPTLSPEHWKAVPPVSPElrkpGPPLSPEI 430
Cdd:PHA03378 794 PTPQPppqagPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKK--PAALERQAAAGPTPSPG----SGTSDKIV 867
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 431 RSPAGSPELRKPSGSPdlWKL-SPDQRKTSPASLDFPESQKSSRGGSPDLWKSsffIEPQKPVFPET---RKPGPSGPSE 506
Cdd:PHA03378 868 QAPVFYPPVLQPIQVM--RQLgSVRAAAASTVTQAPTEYTGERRGVGPMHPTD---IPPSKRAKTDAyveSQPPHGGQSH 942
|
..
gi 114149935 507 SP 508
Cdd:PHA03378 943 SF 944
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
156-305 |
3.39e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 3.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 156 PQKPGSVVSPELQTPLPSPEP-SKPASVSSPEPPKSVPvcesqklAPVPSPEPQKPAPVSPESVKATLSNPKPqkqshfp 234
Cdd:PRK14951 375 PAEKKTPARPEAAAPAAAPVAqAAAAPAPAAAPAAAAS-------APAAPPAAAPPAPVAAPAAAAPAAAPAA------- 440
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 114149935 235 etlgppsasspespVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEpwkpfPAVSPEPRRPAP 305
Cdd:PRK14951 441 --------------APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPA-----AAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
251-358 |
3.39e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 3.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 251 AASPEPWGPSPAASPESRksaRTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSAS 330
Cdd:PRK14951 379 KTPARPEAAAPAAAPVAQ---AAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100
....*....|....*....|....*...
gi 114149935 331 SGpwKPAKPAPSVSPGPWKPIPSVSPGP 358
Cdd:PRK14951 456 AP--ETVAIPVRVAPEPAVASAAPAPAA 481
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
104-363 |
6.32e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.08 E-value: 6.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 104 DPVKSPPLPEHQKIP-CNSAEPKSIPAlsmetqklgsvlsPESPKPTPltplEPQKPGSVVSPELQTPL-PSPEPSKPAS 181
Cdd:PRK10263 350 DVPPAQPTVAWQPVPgPQTGEPVIAPA-------------PEGYPQQS----QYAQPAVQYNEPLQQPVqPQQPYYAPAA 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 182 VSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSP 261
Cdd:PRK10263 413 EQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEP 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 262 AASPESRKSART-----TSPEPRKPSPSESPEPW-KPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPW--------KSNP 327
Cdd:PRK10263 493 EPVVEETKPARPplyyfEEVEEKRAREREQLAAWyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAvsplasgvKKAT 572
|
250 260 270
....*....|....*....|....*....|....*...
gi 114149935 328 SASSGPWKPAKPAPSVSPGPwKPIPSVSP--GPWKPTP 363
Cdd:PRK10263 573 LATGAAATVAAPVFSLANSG-GPRPQVKEgiGPQLPRP 609
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
142-345 |
8.12e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 8.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 142 SPESPKPTPLTPLEPQKPGSVVspeLQTPLPSPEPSKPASVSSPEPPKS----------------VPVCESQKLAPVPSP 205
Cdd:PHA03247 276 TGPPPPPEAAAPNGAAAPPDGV---WGAALAGAPLALPAPPDPPPPAPAgdaeeeddedgamevvSPLPRPRQHYPLGFP 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 206 EPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASspespvlaaspepwgpspAASPESRKSARTTSPEPRKPSPSE 285
Cdd:PHA03247 353 KRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARH------------------AATPFARGPGGDDQTRPAAPVPAS 414
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 286 SPEpwkPFPAVSPEPRRPAPAVSPGSWKPGPPGSPrpwksNPSASSGPWKPAKPAPSVSP 345
Cdd:PHA03247 415 VPT---PAPTPVPASAPPPPATPLPSAEPGSDDGP-----APPPERQPPAPATEPAPDDP 466
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
143-513 |
1.03e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.21 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 143 PESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPksvpvcESQKLAPVPSPEPQKPAPVSPESVKATL 222
Cdd:PRK07764 381 LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPA------AAPQPAPAPAPAPAPPSPAGNAPAGGAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 223 SNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPE----------------------------SRKSARTT 274
Cdd:PRK07764 455 SPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAapaapagaddaatlrerwpeilaavpkrSRKTWAIL 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 275 SPEPR------------KPSP--------SESPE------------PWKPFPAVSPEPRRPAPAVSPGSWKPGPPgsprP 322
Cdd:PRK07764 535 LPEATvlgvrgdtlvlgFSTGglarrfasPGNAEvlvtalaeelggDWQVEAVVGPAPGAAGGEGPPAPASSGPP----E 610
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 323 WKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPelrktAP 402
Cdd:PRK07764 611 EAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPP-----AP 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 403 TLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSpdlwklSPDQRKTSPASLDFPESqkSSRGGSPDLWKS 482
Cdd:PRK07764 686 APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA------SAPSPAADDPVPLPPEP--DDPPDPAGAPAQ 757
|
410 420 430
....*....|....*....|....*....|.
gi 114149935 483 SFFIEPQKPVFPETRKPGPSGPSESPKAASD 513
Cdd:PRK07764 758 PPPPPAPAPAAAPAAAPPPSPPSEEEEMAED 788
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
143-446 |
1.34e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 49.00 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 143 PESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPP-----KSVPVCESQKL---------APVPSPEPQ 208
Cdd:pfam03154 181 ASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliQQTPTLHPQRLpsphpplqpMTQPPPPSQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 209 KPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPE 288
Cdd:pfam03154 261 VSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPP 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 289 PWKPFPavspeprrPAPAVSPgSWKPgPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSA 368
Cdd:pfam03154 341 REQPLP--------PAPLSMP-HIKP-PPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSA 410
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 369 SWKSSSVSPSSWKSPPASPEswksgPPELRKTaPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSP 446
Cdd:pfam03154 411 HPPPLQLMPQSQQLPPPPAQ-----PPVLTQS-QSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPP 482
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
176-546 |
1.51e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 176 PSKPASVSSPEPPKSVPVcesqklAPVPSPEPQKPAPVSPESVkATLSNPKPQKQshfPETLGPPSASSPESPVLAASPE 255
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAA------APAAAPAPAAAAPAAAAAP-APAAAPQPAPA---PAPAPAPPSPAGNAPAGGAPSP 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 256 PWGPSPAASPEsrksARTTSPEPRKPSPSESPEPWkpfPAVSPEPRRPAPAVSPGS------------------------ 311
Cdd:PRK07764 457 PPAAAPSAQPA----PAPAAAPEPTAAPAPAPPAA---PAPAAAPAAPAAPAAPAGaddaatlrerwpeilaavpkrsrk 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 312 ----WKPGP-------------------------PGSP------------RPWK-----SNPSASSGPWKPAKPAPSVSP 345
Cdd:PRK07764 530 twaiLLPEAtvlgvrgdtlvlgfstgglarrfasPGNAevlvtalaeelgGDWQveavvGPAPGAAGGEGPPAPASSGPP 609
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 346 GPwKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPElrkTAPTLSPEHWKAVPPVSPELRKPGPP 425
Cdd:PRK07764 610 EE-AARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAV---PDASDGGDGWPAKAGGAAPAAPPPAP 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 426 LSPEIRSPAGSPElrkPSGSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWKSSFFIEPQKPVFPETrkPGPSGPS 505
Cdd:PRK07764 686 APAAPAAPAGAAP---AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG--APAQPPP 760
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 114149935 506 ESPKAASDIWKPVLSIDTEPRKPALFPEPaktAPPASPEAR 546
Cdd:PRK07764 761 PPAPAPAAAPAAAPPPSPPSEEEEMAEDD---APSMDDEDR 798
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
250-542 |
1.67e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.69 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 250 LAASPEPWGPS-PAASPESRKSARTTSPEPRKPSPSESPE--PWKPFPAVSPEPRRPAPAVSPGSWKPGPPgsPRPWKSN 326
Cdd:PRK07003 356 LAFEPAVTGGGaPGGGVPARVAGAVPAPGARAAAAVGASAvpAVTAVTGAAGAALAPKAAAAAAATRAEAP--PAAPAPP 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 327 PSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSppaspesWKSGPPELRKTAPTLSP 406
Cdd:PRK07003 434 ATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAA-------FEPAPRAAAPSAATPAA 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 407 EHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPsgspdlwklsPDQRKTSPASLDFPESQ----KSSRGGSPdlwks 482
Cdd:PRK07003 507 VPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAP----------AARAGGAAAALDVLRNAgmrvSSDRGARA----- 571
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 483 sffiepqkpvfPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPPAS 542
Cdd:PRK07003 572 -----------AAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAA 620
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
252-444 |
1.87e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 252 ASPEPWGPSPAASPESrkSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPwksnPSASS 331
Cdd:PRK07764 616 AAPAAPAAPAAPAPAG--AAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPA----PAPAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 332 GPWKPAKPAPSVSPGP-WKPIPSVSPGPWkPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWK 410
Cdd:PRK07764 690 PAAPAGAAPAQPAPAPaATPPAGQADDPA-AQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAA 768
|
170 180 190
....*....|....*....|....*....|....
gi 114149935 411 AVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSG 444
Cdd:PRK07764 769 APAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAE 802
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
178-318 |
2.52e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 178 KPAS-VSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQkqshfPETLGPPSASSPESPVLAASPEP 256
Cdd:PRK14951 365 KPAAaAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAA-----PPAAAPPAPVAAPAAAAPAAAPA 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 114149935 257 WGPSPAASPESrksarttSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPG 318
Cdd:PRK14951 440 AAPAAVALAPA-------PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
121-352 |
3.92e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 3.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 121 SAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVspelqtplPSPEPSKPASVSSPEPPKSVPVCESQKLA 200
Cdd:PRK07003 374 ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAA--------AAAATRAEAPPAAPAPPATADRGDDAADG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 201 PVPSPEPQkPAPVSPESVKATLSnPKPQKQshfPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSAR-TTSPEPR 279
Cdd:PRK07003 446 DAPVPAKA-NARASADSRCDERD-AQPPAD---SGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARApAAASRED 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 280 KPSPSESPEPW--KPFPAVSPEPRR-------------------------PAPAVSPGSWKPG--PPGSPRPWKSNPS-- 328
Cdd:PRK07003 521 APAAAAPPAPEarPPTPAAAAPAARaggaaaaldvlrnagmrvssdrgarAAAAAKPAAAPAAapKPAAPRVAVQVPTpr 600
|
250 260 270
....*....|....*....|....*....|...
gi 114149935 329 ----ASSGPWKPAKPAPSV-----SPGPWKPIP 352
Cdd:PRK07003 601 araaTGDAPPNGAARAEQAaesrgAPPPWEDIP 633
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
207-331 |
3.97e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 3.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 207 PQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSES 286
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 114149935 287 PEPWKPFPAVSPEPRRPAPAVSPGswkPGPPGSPRPWKSNPSASS 331
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPE---PAVASAAPAPAAAPAAAR 487
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
170-311 |
4.59e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 170 PLPSPEPSKPASVSSPEPPKSVpvcesqklAPVPSPEPQKPAPVSPESVKATLSNPKPQkqshfPETLGPPSASSPESPV 249
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAA--------APAAAPVAQAAAAPAPAAAPAAAASAPAA-----PPAAAPPAPVAAPAAA 432
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 114149935 250 LAASPEPWGPSPAASPESRKSArtTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGS 311
Cdd:PRK14951 433 APAAAPAAAPAAVALAPAPPAQ--AAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
139-356 |
5.26e-05 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 46.74 E-value: 5.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 139 SVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESV 218
Cdd:PRK14086 91 SAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAWPRAADDYGWQQQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 219 KATLSNPKPQkqshfpetlgppsasspespvlaASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSP 298
Cdd:PRK14086 171 RLGFPPRAPY-----------------------ASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPRPDWDRPRRDRTD 227
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 299 EPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPsvSPGPWKPIPSVSP 356
Cdd:PRK14086 228 RPEPPPGAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAP--APGPGEPTARLNP 283
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
82-333 |
5.40e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.99 E-value: 5.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 82 TSKHASPDKWNDKPKN----QLNKETDPVKSP-PLPEHQkipcnsaePKSIPALSMEtqklgsvlsPESPK--PTPLTPL 154
Cdd:PTZ00449 530 EEGEHEDSKESDEPKEggkpGETKEGEVGKKPgPAKEHK--------PSKIPTLSKK---------PEFPKdpKHPKDPE 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 155 EPQKPGSVVSPelQTPLPSPEPSKPASVSSPEPPKSVPVCESqklaPVPSPEPQKP-APVSPESVKAtlsnPKpqkqshf 233
Cdd:PTZ00449 593 EPKKPKRPRSA--QRPTRPKSPKLPELLDIPKSPKRPESPKS----PKRPPPPQRPsSPERPEGPKI----IK------- 655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 234 petlgppsasspespvlaASPEPWGPSPAASPE---------SRKSART----TSPEPRKPSPSESPEPWKPFPAVSPEP 300
Cdd:PTZ00449 656 ------------------SPKPPKSPKPPFDPKfkekfyddyLDAAAKSketkTTVVLDESFESILKETLPETPGTPFTT 717
|
250 260 270
....*....|....*....|....*....|....*
gi 114149935 301 RRPAPAVSPG--SWKPGPPGSPRPWKSNPSASSGP 333
Cdd:PTZ00449 718 PRPLPPKLPRdeEFPFEPIGDPDAEQPDDIEFFTP 752
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
95-319 |
7.64e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.47 E-value: 7.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 95 PKNQLNKETDPVKSPPLPEhqkipcnsaEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPgsvVSPELQT-PLPS 173
Cdd:PHA03247 2887 ARPAVSRSTESFALPPDQP---------ERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP---LAPTTDPaGAGE 2954
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 174 PEPSKPASVSSPEPPKSVPVCESQklapVPSPEPQKPAPVSPESVKATLSNPkpqKQSHFPETLGPPSASSPESPVLAAS 253
Cdd:PHA03247 2955 PSGAVPQPWLGALVPGRVAVPRFR----VPQPAPSREAPASSTPPLTGHSLS---RVSSWASSLALHEETDPPPVSLKQT 3027
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 254 PEPWGPSPAASPESRKSARTTSPEPRKPSPsESPEPWKPFpAVSPEPRRPAPA--VSPGSWKPGPPGS 319
Cdd:PHA03247 3028 LWPPDDTEDSDADSLFDSDSERSDLEALDP-LPPEPHDPF-AHEPDPATPEAGarESPSSQFGPPPLS 3093
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
258-558 |
1.46e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 258 GPSPAASPESRKSARttspeprkPSPSESPEPWKPFPAVSPEPRRPAPAVSPgswkPGPPGSPRPWKSNPSASSGPWKPA 337
Cdd:PRK07764 391 AGAPAAAAPSAAAAA--------PAAAPAPAAAAPAAAAAPAPAAAPQPAPA----PAPAPAPPSPAGNAPAGGAPSPPP 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 338 KPAPSVSPGPW-----KPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWksgpPELRKTAPTLSPEHWKAV 412
Cdd:PRK07764 459 AAAPSAQPAPApaaapEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERW----PEILAAVPKRSRKTWAIL 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 413 PP----------------VSPELRKP------------------GPPLSPEIRsPAGSPELRKPSGSPDLWKLSPDQRKT 458
Cdd:PRK07764 535 LPeatvlgvrgdtlvlgfSTGGLARRfaspgnaevlvtalaeelGGDWQVEAV-VGPAPGAAGGEGPPAPASSGPPEEAA 613
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 459 SPASLDFPESQKSSRGGSPdlwkssffiePQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTA 538
Cdd:PRK07764 614 RPAAPAAPAAPAAPAPAGA----------AAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPP 683
|
330 340
....*....|....*....|
gi 114149935 539 PPASPEARKRALFPEPRKHA 558
Cdd:PRK07764 684 APAPAAPAAPAGAAPAQPAP 703
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
251-348 |
1.62e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 45.06 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 251 AASPEPWGPSP-AASPESRKSARTTSPEPRKPSPSESPE-PWK---PFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKS 325
Cdd:PRK14959 395 ATIPTPGTQGPqGTAPAAGMTPSSAAPATPAPSAAPSPRvPWDdapPAPPRSGIPPRPAPRMPEASPVPGAPDSVASASD 474
|
90 100
....*....|....*....|...
gi 114149935 326 NPSASSGPWKPAKPAPSvSPGPW 348
Cdd:PRK14959 475 APPTLGDPSDTAEHTPS-GPRTW 496
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
88-236 |
1.83e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.14 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 88 PDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPEL 167
Cdd:NF033839 345 PQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 424
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 168 QTPLPS--PEPSKPASVSSPEPPKSVPVCESQKLAPVP--SPEPQKPAP-VSPESVKATLSNPKPQKQSHFPET 236
Cdd:NF033839 425 EKPKPEvkPQPEKPKPEVKPQPEKPKPEVKPQPETPKPevKPQPEKPKPeVKPQPEKPKPDNSKPQADDKKPST 498
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
144-331 |
1.87e-04 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 45.26 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 144 ESPKPTPLTPLEPQkPGSVVSPELQTPLPSPEPSKPASVSSP-------EPPKSVPVCESQKLAPVPSPEPQKPAPVSPE 216
Cdd:pfam15324 962 EAQREPPVAASVPG-DLPTKETLLPTPVPTPQPTPPCSPPSPlkepspvKTPDSSPCVSEHDFFPVKEIPPEKGADTGPA 1040
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 217 SVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPE---PWGPSPAASPESRKSARTTSPEPRKPSPS----ESPEP 289
Cdd:pfam15324 1041 VSLVITPTVTPIATPPPAATPTPPLSENSIDKLKSPSPElpkPWEDSDLPLEEENPNSEQEELHPRAVVMSvardEEPES 1120
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 114149935 290 WKpFPAVSPEPrrpaPAVSPGSWKPGPPGSPRPWKSNPSASS 331
Cdd:pfam15324 1121 VV-LPASPPEP----KPLAPPPLGAAPPSPPQSPSSSSSTLE 1157
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
259-358 |
1.88e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 44.93 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 259 PSPAASPESRKSArttsPEPRKPSPSESPEPWKPfpavSPEPRRPAPAVSPGSwKPGPPGSPrpwksnpsassgpwkpak 338
Cdd:PRK14954 382 PSPAGSPDVKKKA----PEPDLPQPDRHPGPAKP----EAPGARPAELPSPAS-APTPEQQP------------------ 434
|
90 100
....*....|....*....|
gi 114149935 339 paPSVSPGPWKPIPSVSPGP 358
Cdd:PRK14954 435 --PVARSAPLPPSPQASAPR 452
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
263-564 |
2.05e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 263 ASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEP-----RRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPA 337
Cdd:NF033839 146 DSSSSSSSGSSTKPETPQPENPEHQKPTTPAPDTKPSPqpegkKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 338 KPAPSVS------PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS-GPPELRKTAPTLSPEHWK 410
Cdd:NF033839 226 KHRQIVAlikeldELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEpGNKKPSAPKPGMQPSPQP 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 411 AVPPVSPELRKPGPPLSPEIRSP----AGSPELRKPSGSPDLWKLSPDQRKTspasldfPESQKSSRGGSPDLWKSSFFI 486
Cdd:NF033839 306 EKKEVKPEPETPKPEVKPQLEKPkpevKPQPEKPKPEVKPQLETPKPEVKPQ-------PEKPKPEVKPQPEKPKPEVKP 378
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 487 EPQKPvfPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFPELP 564
Cdd:NF033839 379 QPETP--KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK 454
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
215-358 |
2.13e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 215 PESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFP 294
Cdd:PHA03307 761 PSLVPAKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPG 840
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 295 AVSpepRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Cdd:PHA03307 841 AAA---RPPPARSSESSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAP 901
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
295-449 |
4.96e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 295 AVSPEPRRPAPAVSPGSwKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSS 374
Cdd:PRK14951 363 AFKPAAAAEAAAPAEKK-TPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 114149935 375 VSPSSWKSPPASPEswksgPPELRKTAPTLSPEhwkavppvspelrkPGPPLSPEIRSPAGSPELRKPSGSPDLW 449
Cdd:PRK14951 442 PAAVALAPAPPAQA-----APETVAIPVRVAPE--------------PAVASAAPAPAAAPAAARLTPTEEGDVW 497
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
190-322 |
5.31e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 5.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 190 SVPVCESQKLAPVPSPEPqKPAPVsPESVKATLSNPKPQKQShfpetlgppsasspesPVLAASPEPWGPSPAASPESR- 268
Cdd:PRK14951 372 AAAPAEKKTPARPEAAAP-AAAPV-AQAAAAPAPAAAPAAAA----------------SAPAAPPAAAPPAPVAAPAAAa 433
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 269 -KSARTTSPEPRKPSPSES----PEPWKPFPAVSPEPRRPAPAVSPGswkPGPPGSPRP 322
Cdd:PRK14951 434 pAAAPAAAPAAVALAPAPPaqaaPETVAIPVRVAPEPAVASAAPAPA---AAPAAARLT 489
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
256-554 |
6.22e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 6.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 256 PWGPSPAASpesrksARTTSPEPRKPSPSES---PEPWKPFPAVSPEPRR-----PAPAVSPGSWKPGPPGSPRPW--KS 325
Cdd:PHA03247 206 PSGPGPAAP------ADLTAAALHLYGASETylqDEPFVERRVVISHPLRgdiaaPAPPPVVGEGADRAPETARGAtgPP 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 326 NPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSS---WKSPPASPESWKSGPPELRKtaP 402
Cdd:PHA03247 280 PPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAmevVSPLPRPRQHYPLGFPKRRR--P 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 403 TLSPehwkavpPVSPEL----RKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASldfpesqkssrggSPd 478
Cdd:PHA03247 358 TWTP-------PSSLEDlsagRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPAS-------------VP- 416
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114149935 479 lwkssffiEPQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPA-KTAPPASPEARKRALFPEP 554
Cdd:PHA03247 417 --------TPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDpDDATRKALDALRERRPPEP 485
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
172-306 |
7.47e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 172 PSPEPSKP--------ASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETlgppsAS 243
Cdd:PRK07994 364 PLPEPEVPpqsaapaaSAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT-----KA 438
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114149935 244 SPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSE----SPEPWKPFPAVSPEPRRPAPA 306
Cdd:PRK07994 439 KKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRwkatNPVEVKKEPVATPKALKKALE 505
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
137-331 |
9.44e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 42.64 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 137 LGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPskPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSP- 215
Cdd:PRK14948 360 LPSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQ--AATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPp 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 216 ---------------------------------ESVKATLS----------NPKPQKQSHFPETLGPPSASSPESPVLAA 252
Cdd:PRK14948 438 slnleelwqqilaklelpstrmllsqqaelvslDSNRAVIAvspnwlgmvqSRKPLLEQAFAKVLGRSIKLNLESQSGSA 517
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 253 SPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPfpaVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASS 331
Cdd:PRK14948 518 SNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPP---TATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
199-334 |
9.70e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.06 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 199 LAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS---PESPVLAASPEPWGPS--PAASPESRKSART 273
Cdd:NF040712 199 LATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarrRRAGVEQPEDEPVGPGaaPAAEPDEATRDAG 278
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 114149935 274 TSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPgswKPGPPGSPRPWKSNPSASSGPW 334
Cdd:NF040712 279 EPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPA---RPEPPPAPKPKRRRRRASVPSW 336
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
90-351 |
1.06e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 42.74 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 90 KWNDKPKNQLNKETDPVKSPPLPehqkiPCNSAEPKSIPALSMETQKlGSVLSPESP-----KPTPLTPLEPQKPGSVVS 164
Cdd:PHA03379 396 KLTERAREALEKASEPTYGTPRP-----PVEKPRPEVPQSLETATSH-GSAQVPEPPpvhdlEPGPLHDQHSMAPCPVAQ 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 165 PElQTPLPSPEPS--KPASVSSPEPpksvpvcesqklAPVPSPEPQKP--APVSPESVKATLSNPKPQKQSHFPETLGPP 240
Cdd:PHA03379 470 LP-PGPLQDLEPGdqLPGVVQDGRP------------ACAPVPAPAGPivRPWEASLSQVPGVAFAPVMPQPMPVEPVPV 536
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 241 SASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVS-----PEPRRPAPAVSPGSWKPG 315
Cdd:PHA03379 537 PTVALERPVCPAPPLIAMQGPGETSGIVRVRERWRPAPWTPNPPRSPSQMSVRDRLArlraeAQPYQASVEVQPPQLTQV 616
|
250 260 270
....*....|....*....|....*....|....*.
gi 114149935 316 PPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPI 351
Cdd:PHA03379 617 SPQQPMEYPLEPEQQMFPGSPFSQVADVMRAGGVPA 652
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
259-363 |
1.12e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.41 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 259 PSPAASPESRKSAR------TTSPEPRKPSPSESPEPW---KPFPAVSPE---PRRPAPAVSPGSWKPGPPGSPRPWKSN 326
Cdd:PHA03269 40 PDPAPAPHQAASRApdpavaPTSAASRKPDLAQAPTPAaseKFDPAPAPHqaaSRAPDPAVAPQLAAAPKPDAAEAFTSA 119
|
90 100 110
....*....|....*....|....*....|....*..
gi 114149935 327 PSassgpwkpAKPAPSVSPgpwkpipsVSPGPWKPTP 363
Cdd:PHA03269 120 AQ--------AHEAPADAG--------TSAASKKPDP 140
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
304-558 |
1.19e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 304 APAVSPGSwkpGPPGSPRPwkSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPwKPTPSVSSASWKSSSVSPSSWKSP 383
Cdd:PRK07003 359 EPAVTGGG---APGGGVPA--RVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGA-ALAPKAAAAAAATRAEAPPAAPAP 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 384 PASPESWKSGPPelrKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRS-PAGS--PELRKPSGSPDlwklSPDQRKTSP 460
Cdd:PRK07003 433 PATADRGDDAAD---GDAPVPAKANARASADSRCDERDAQPPADSGSASaPASDapPDAAFEPAPRA----AAPSAATPA 505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 461 ASLDFPESQKSSRGGSPdlwkssffiEPQKPVFPETRKPGPSGPSESPK-----AASDIWKPV---LSIDtEPRKPALFP 532
Cdd:PRK07003 506 AVPDARAPAAASREDAP---------AAAAPPAPEARPPTPAAAAPAARaggaaAALDVLRNAgmrVSSD-RGARAAAAA 575
|
250 260
....*....|....*....|....*.
gi 114149935 533 EPAKTAPPASPEARKRALFPEPRKHA 558
Cdd:PRK07003 576 KPAAAPAAAPKPAAPRVAVQVPTPRA 601
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
250-429 |
1.25e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.16 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 250 LAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPrRPAPAVSPGSWKPGPPGSPRPWKSNPSA 329
Cdd:PRK07994 357 LAFHPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAP-QQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 330 SsgPWKPAKPAPSVSPGPWK----PIPSVSPGPWKPTPSVSSASWKsssvspsswksppaspeSWKSGPPELRKTAPTLS 405
Cdd:PRK07994 436 T--KAKKSEPAAASRARPVNsaleRLASVRPAPSALEKAPAKKEAY-----------------RWKATNPVEVKKEPVAT 496
|
170 180
....*....|....*....|....*.
gi 114149935 406 PEHWKAVP--PVSPELRKPGPPLSPE 429
Cdd:PRK07994 497 PKALKKALehEKTPELAAKLAAEAIE 522
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
142-300 |
1.31e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.16 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 142 SPESPkPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKAT 221
Cdd:PRK07994 367 EPEVP-PQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 222 LSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPEsrKSARTTSPEPRKPSPSE-SPEPWKPFPAVSPEP 300
Cdd:PRK07994 446 ASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVK--KEPVATPKALKKALEHEkTPELAAKLAAEAIER 523
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
116-358 |
1.43e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 116 KIPCNSAEPKSIPAlsmetqklgsvlsPESPKPTPLTPLEPQKPgsvVSPELQTPlpspePSKPASVSSPEPPKSVpvCE 195
Cdd:PLN03209 322 KIPSQRVPPKESDA-------------ADGPKPVPTKPVTPEAP---SPPIEEEP-----PQPKAVVPRPLSPYTA--YE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 196 SQKLAPVPSPEPQKPAPVSPESVKATL------SNPKPQKQSHFPETLGPPSASSPESPVL----------AASPEPWGP 259
Cdd:PLN03209 379 DLKPPTSPIPTPPSSSPASSKSVDAVAkpaepdVVPSPGSASNVPEVEPAQVEAKKTRPLSpyaryedlkpPTSPSPTAP 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 260 SPAASPESRKSARTTSPEPRKPS--------PSESPEPWKPF-------PAVSPEPRRPAPAVSPGSWKPGPPGSPRPWK 324
Cdd:PLN03209 459 TGVSPSVSSTSSVPAVPDTAPATaatdaaapPPANMRPLSPYavyddlkPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPP 538
|
250 260 270
....*....|....*....|....*....|....*...
gi 114149935 325 SNPsASSGPWKPAKPAPsVSPGP----WKPIPSVSPGP 358
Cdd:PLN03209 539 TAL-ADEQHHAQPKPRP-LSPYTmyedLKPPTSPTPSP 574
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
250-325 |
1.60e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 1.60e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114149935 250 LAASPEpwGPSPAASPESRKSARTTSPEP-RKPSPSESPEPwkpfpAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKS 325
Cdd:COG5373 37 LAEAAE--AASAPAEPEPEAAAAATAAAPeAAPAPVPEAPA-----APPAAAEAPAPAAAAPPAEAEPAAAPAAASS 106
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
142-446 |
1.73e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 142 SPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKAT 221
Cdd:PRK07764 425 PAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 222 LSNPKPQKQSHFPETLGP-PSASSPESPVLAASPEPWG----------PSPA-----ASPESRKSARTT----------- 274
Cdd:PRK07764 505 GADDAATLRERWPEILAAvPKRSRKTWAILLPEATVLGvrgdtlvlgfSTGGlarrfASPGNAEVLVTAlaeelggdwqv 584
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 275 ----SPEPRKPSPSESPEPWKPFPAvsPEPRRPAPAVSPGSW----KPGPPGSPRPWKSNPSASSGPWKPAK-----PAP 341
Cdd:PRK07764 585 eavvGPAPGAAGGEGPPAPASSGPP--EEAARPAAPAAPAAPaapaPAGAAAAPAEASAAPAPGVAAPEHHPkhvavPDA 662
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 342 SVSPGPWKPI---PSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRK---TAPTLSPEHWKAVPPV 415
Cdd:PRK07764 663 SDGGDGWPAKaggAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQaaqGASAPSPAADDPVPLP 742
|
330 340 350
....*....|....*....|....*....|.
gi 114149935 416 SPELRKPGPPLSPEIRSPAGSPELRKPSGSP 446
Cdd:PRK07764 743 PEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
104-438 |
1.86e-03 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 41.59 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 104 DPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVS 183
Cdd:COG5180 152 AALLQRSDPILAKDPDGDSASTLPPPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEPPDLTGGADHPRPEAASS 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 184 SPEPPKSVPVCESQklaPVPSPEPQKPAPvspesvkatlsnPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAA 263
Cdd:COG5180 232 PKVDPPSTSEARSR---PATVDAQPEMRP------------PADAKERRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEA 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 264 SPESRKSARTTSPEPRKPSPSESPE-------PWKPFPAVSPE--PRRPAPAVSPGSWKPgPPGSPRPWKSNPSASSGPW 334
Cdd:COG5180 297 ETARPIDVKGVASAPPATRPVRPPGgardpgtPRPGQPTERPAgvPEAASDAGQPPSAYP-PAEEAVPGKPLEQGAPRPG 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 335 KPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPP 414
Cdd:COG5180 376 SSGGDGAPFQPPNGAPQPGLGRRGAPGPPMGAGDLVQAALDGGGRETASLGGAAGGAGQGPKADFVPGDAESVSGPAGLA 455
|
330 340
....*....|....*....|....
gi 114149935 415 VSPELRKPGPPLSPEIRSPAGSPE 438
Cdd:COG5180 456 DQAGAAASTAMADFVAPVTDATPV 479
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
126-232 |
2.00e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.72 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 126 SIPALSMETQKLGSVLSPESP----KPTPLTPlEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAP 201
Cdd:PRK14950 345 SYGQLPLELAVIEALLVPVPApqpaKPTAAAP-SPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPH 423
|
90 100 110
....*....|....*....|....*....|.
gi 114149935 202 VPSPEPQKPAPVSPESVKATLSNPKPQKQSH 232
Cdd:PRK14950 424 TPESAPKLTRAAIPVDEKPKYTPPAPPKEEE 454
|
|
| PTRF_SDPR |
pfam15237 |
PTRF/SDPR family; This family of proteins includes muscle-related coiled-coil protein (MURC), ... |
597-700 |
2.12e-03 |
|
PTRF/SDPR family; This family of proteins includes muscle-related coiled-coil protein (MURC), protein kinase C delta-binding protein (PRKCDBP), polymerase I and transcript release factor (PTRF) and serum deprivation-response protein (SDPR). MURC activates the Rho/ROCK pathway. PRKCDBP appears to act as an immune potentiator. PTRF is involved in caveolae formation and function. SDPR is involved in the targetting of protein kinase Calpha to caveolae.
Pssm-ID: 464578 Cd Length: 250 Bit Score: 40.86 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 597 QEELLASPK-KLL---EDTLFPSSKKLKKDNQESSDAELSSSEYIKTDLDAMDIKGQESSSDQEQVDVESIDFSKENKMD 672
Cdd:pfam15237 95 QAELLKRNKfKVViyqEENEIPSSLSVKKSPEPSKGSEGGSVEGNETEEDTLQPPTVDLSSDEEYEVEEEAEESRAERLK 174
|
90 100
....*....|....*....|....*...
gi 114149935 673 MTSPEQSRNVlqfteeKEAFiSEEEIAK 700
Cdd:pfam15237 175 RSSLKRVDSL------KKAF-SKENMQK 195
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
252-460 |
2.30e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 41.45 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 252 ASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASS 331
Cdd:PLN03209 342 VPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASN 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 332 GPWKPAKPAPSVSPGPWKPI-------PSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTL 404
Cdd:PLN03209 422 VPEVEPAQVEAKKTRPLSPYaryedlkPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYA 501
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 114149935 405 SPEHWKavPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWK--LSPDQRKTSP 460
Cdd:PLN03209 502 VYDDLK--PPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQhhAQPKPRPLSP 557
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
292-361 |
3.07e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 41.20 E-value: 3.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 292 PFPA-VSPEPRRPAPAVSPGSwkpGPPGSPRPwkSNPSASSGPWKPAKPAPSVSPGPWKP---IPSVSPGPWKP 361
Cdd:PRK14959 398 PTPGtQGPQGTAPAAGMTPSS---AAPATPAP--SAAPSPRVPWDDAPPAPPRSGIPPRPaprMPEASPVPGAP 466
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
249-312 |
3.40e-03 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 40.86 E-value: 3.40e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 114149935 249 VLAASPEPWGPSPAASPESRKS--ARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSW 312
Cdd:PRK06975 262 FLTWADAAAQPATAAPAPSRMTdtNDSKSVTSQPAAAAAAPAPPPNPPATPPEPPARRGRGSAALW 327
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
292-437 |
4.43e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 292 PFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWK 371
Cdd:PHA03307 775 LEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESS 854
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114149935 372 SSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEI-RSPAGSP 437
Cdd:PHA03307 855 KSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLgPMPPGGP 921
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
102-320 |
4.57e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 102 ETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPlePQKPGSVVSPELQTPLPSPEPSKPAS 181
Cdd:PHA03378 695 QPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARP--PAAAPGRARPPAAAPGRARPPAAAPG 772
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 182 VSSPEPPKSVPVCESQ--KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGP 259
Cdd:PHA03378 773 APTPQPPPQAPPAPQQrpRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAA 852
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114149935 260 SPAASPESRKSARTTSPE---PRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSP 320
Cdd:PHA03378 853 GPTPSPGSGTSDKIVQAPvfyPPVLQPIQVMRQLGSVRAAAASTVTQAPTEYTGERRGVGPMHP 916
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
88-228 |
4.88e-03 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 40.15 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 88 PDKWNDKPKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQklgSVLSPESPKPTP-LTPLEPQKPGSVVSPE 166
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTL---STDKEQSPAPTSaSEPPPKTKELPKDSEE 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 114149935 167 LQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQ 228
Cdd:pfam13254 274 PAAPSKSAEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQ 335
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
174-312 |
4.92e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.14 E-value: 4.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 174 PEPSKP----ASVSSPEPPKSVPVCESqkLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS--PES 247
Cdd:NF040712 190 PDFGRPlrplATVPRLAREPADARPEE--VEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPgaAPA 267
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114149935 248 PVLAASPEPWGPSPA-ASPESRKSARTTSPEPRKPSPS---ESPEPWKPFPAVSPEPRRPAPAVSPGSW 312
Cdd:NF040712 268 AEPDEATRDAGEPPApGAAETPEAAEPPAPAPAAPAAPaapEAEEPARPEPPPAPKPKRRRRRASVPSW 336
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
261-600 |
5.06e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.45 E-value: 5.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 261 PAASPESRKSARTTSPEPRKpSPSESPEPWKPFPAVSPEPRRPAPA--VSPGSWKPGPPGSPRPWKSNPSASSGPWKPAK 338
Cdd:PRK10263 315 PITEPVAVAAAATTATQSWA-APVEPVTQTPPVASVDVPPAQPTVAwqPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQY 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 339 PAPSVSPGPWKPIPSVSPGPWKPTPS--VSSASWKSSSVSPSSWKSPPASPESWKSGPPE-LRKTAPTLSPEHWKAVPPV 415
Cdd:PRK10263 394 NEPLQQPVQPQQPYYAPAAEQPAQQPyyAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQsTFAPQSTYQTEQTYQQPAA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 416 SPELRKPGPPLSPE-IRSPAGSPELRKPSGSPDLWKLSPDQRKTSPAsldfpESQKSSRGGSPDLWKSSFFIEPQKPVFP 494
Cdd:PRK10263 474 QEPLYQQPQPVEQQpVVEPEPVVEETKPARPPLYYFEEVEEKRARER-----EQLAAWYQPIPEPVKEPEPIKSSLKAPS 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 495 ETRKPGPSGPSESPKAASDIWKPVLSIDTEPRKPALFPEPAKTAPPaSPEAR----------KRALFPEPRKHALFP-EL 563
Cdd:PRK10263 549 VAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGP-RPQVKegigpqlprpKRIRVPTRRELASYGiKL 627
|
330 340 350
....*....|....*....|....*....|....*..
gi 114149935 564 PKSALFSESQKAVELGDELQIDAIDDQKCDILVQEEL 600
Cdd:PRK10263 628 PSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDEL 664
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
252-342 |
5.57e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 39.99 E-value: 5.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 252 ASPEPWGPSPAASPESRKSARTTSPEPRkPSPSESpEPWKPFPAVSPEPRRPAPA----VSPGSWKPGPPGS------PR 321
Cdd:PHA03264 259 EESKGYEPPPAPSGGSPAPPGDDRPEAK-PEPGPV-EDGAPGRETGGEGEGPEPAgrdgAAGGEPKPGPPRPapdadrPE 336
|
90 100
....*....|....*....|.
gi 114149935 322 PWKSNPSASSGPWKPAKPAPS 342
Cdd:PHA03264 337 GWPSLEAITFPPPTPATPAVP 357
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
124-290 |
5.57e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.23 E-value: 5.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 124 PKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVsSPEPPKSVPVCESQKLAPVP 203
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETT-SQLLAARQQLQRAQGATKAK 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 204 SPEPQKPAPVSP-ESVKATLSNPKPQkqshfPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSA----RTTSPEP 278
Cdd:PRK07994 440 KSEPAAASRARPvNSALERLASVRPA-----PSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKAleheKTPELAA 514
|
170
....*....|..
gi 114149935 279 RKPSPSESPEPW 290
Cdd:PRK07994 515 KLAAEAIERDPW 526
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
258-347 |
6.15e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.99 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 258 GPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPgSPRPwksnPSASSGPWKPA 337
Cdd:NF041121 17 RAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPP-PPGP----AGAAPGAALPV 91
|
90
....*....|.
gi 114149935 338 K-PAPSVSPGP 347
Cdd:NF041121 92 RvPAPPALPNP 102
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
139-233 |
6.43e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 39.83 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 139 SVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPS---KPASVSSPEPPKSVPVCESQKLAPVPSPEPQK--PAPV 213
Cdd:COG3266 271 SLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAaaaAPAEAAAPQPTAAKPVVTETAAPAAPAPEAAAaaAAPA 350
|
90 100
....*....|....*....|...
gi 114149935 214 SPESVKATLSNPKP---QKQSHF 233
Cdd:COG3266 351 APAVAKKLAADEQWlasQPASHY 373
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
148-299 |
8.16e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 39.65 E-value: 8.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 148 PTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKP 227
Cdd:PRK14960 363 PNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 228 QKQSHF-------PETLGppSASSPESPVLAASPEPWGPspaaSPESR--KSARTTSPEPRKPSPSESPEPWKPFPAVSP 298
Cdd:PRK14960 443 QPNQDLmvfdpnhHELIG--LESAVVQETVSVLEEDFIP----VPEQKlvQVQAETQVKQIEPEPASTAEPIGLFEASSA 516
|
.
gi 114149935 299 E 299
Cdd:PRK14960 517 E 517
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
274-418 |
8.52e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.41 E-value: 8.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114149935 274 TSPEPRKPSPSeSPEPWKPFPAVSPEPRRPAPAVSPGswKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPgpwkpiPS 353
Cdd:PRK14950 364 PAPQPAKPTAA-APSPVRPTPAPSTRPKAAAAANIPP--KEPVRETATPPPVPPRPVAPPVPHTPESAPKLT------RA 434
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 114149935 354 VSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPE 418
Cdd:PRK14950 435 AIPVDEKPKYTPPAPPKEEEKALIADGDVLEQLEAIWKQILRDVPPRSPAVQALLSSGVRPVSVE 499
|
|
| |
