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Conserved domains on  [gi|1133643763|dbj|BAW79653|]
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hypothetical conserved protein [Candidatus Nitrosoglobus terrae]

Protein Classification

DUF3617 domain-containing protein( domain architecture ID 10574053)

uncharacterized DUF3617 domain-containing protein similar to Salmonella enterica protein YtgA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3617 pfam12276
Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins ...
 9-87 7.02e-04

Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins in this family are typically between 155 and 179 amino acids in length. There is a single completely conserved residue C that may be functionally important.


:

Pssm-ID: 463516  Cd Length: 110  Bit Score: 35.69  E-value: 7.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133643763   9 QAFAKAESRNSCKIEHYQKEGKVVTFDIACTKPEAATSRGVFHL-TGGADFTGTTHTTFNTTGRAITIDIDYTGKQVGIC 87
Cdd:pfam12276  31 KGPEAAQAGGGCTYTDFQVSGGKVSADMVCTGPGGGGTTTMTMTgTYSPTSYTGTMTMTTTGPGGMVMTMTITGKRLGDC 110
 
Name Accession Description Interval E-value
DUF3617 pfam12276
Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins ...
 9-87 7.02e-04

Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins in this family are typically between 155 and 179 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 463516  Cd Length: 110  Bit Score: 35.69  E-value: 7.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133643763   9 QAFAKAESRNSCKIEHYQKEGKVVTFDIACTKPEAATSRGVFHL-TGGADFTGTTHTTFNTTGRAITIDIDYTGKQVGIC 87
Cdd:pfam12276  31 KGPEAAQAGGGCTYTDFQVSGGKVSADMVCTGPGGGGTTTMTMTgTYSPTSYTGTMTMTTTGPGGMVMTMTITGKRLGDC 110
 
Name Accession Description Interval E-value
DUF3617 pfam12276
Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins ...
 9-87 7.02e-04

Protein of unknown function (DUF3617); This family of proteins is found in bacteria. Proteins in this family are typically between 155 and 179 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 463516  Cd Length: 110  Bit Score: 35.69  E-value: 7.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133643763   9 QAFAKAESRNSCKIEHYQKEGKVVTFDIACTKPEAATSRGVFHL-TGGADFTGTTHTTFNTTGRAITIDIDYTGKQVGIC 87
Cdd:pfam12276  31 KGPEAAQAGGGCTYTDFQVSGGKVSADMVCTGPGGGGTTTMTMTgTYSPTSYTGTMTMTTTGPGGMVMTMTITGKRLGDC 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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