|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 686.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 81 QNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 161 LIAILYLNSQTGTLYFPTLKLhpysTPLTPTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQL----THPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 241 KLGGYGIMRITCLTNPPTNNLlHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTL-HYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1133407009 401 TGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 553.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 81 QNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 161 LIAILYLNSQTGTLYFPTLKLHPYSTPLTptkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMT----YTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 241 KLGGYGIMRITCLTNPPTNNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1133407009 401 TGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 551.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 81 QNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 161 LIAILYLNSQTGTLYFPTLKLhpYSTPLTPTkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQL--WAQPLPNS--WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 241 KLGGYGIMRITCLTNPPTNNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMA-YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1133407009 401 TGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
6.50e-159 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 457.88 E-value: 6.50e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLT-PSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 80 SQNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 160 LLIAILYLNSQTGTLYFPTLklhPYSTPLTPTKyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTL---QYSQPLQLSS-WADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 240 LKLGGYGIMRITCLTNPPTNNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPLTKELS-YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTIL 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1133407009 400 LTGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
5.12e-153 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 442.46 E-value: 5.12e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 3 KIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSY-YPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 82 NHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 162 IAILYLNSQTGTLYFPtlkLHPYSTPLTptkyWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLY---ILYFSKLTT----WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 242 LGGYGIMRITCLTNPPTNNLLhYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRIILILGPSTKLSS-YFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 322 ISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1133407009 402 GAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
1.43e-135 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 398.19 E-value: 1.43e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSYY-PYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 80 SQNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 160 LLIAILYLNSQTGTLYFPTLKLHPYSTPLTPtkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSN----SSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 240 LKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTIL 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 1133407009 400 LTGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
5.90e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 339.82 E-value: 5.90e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPttlLSPPKLMWtNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSW-WLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 81 QNHLQYEPPARKRIFMTTLIVVqpLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 161 LIAILYLNSQTGTLYFPTLKLhpystpltptKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF----------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 241 KLGGYGIMRITCLTNPpTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00163 225 KLGGYGLLRVMSFFSK-LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLM 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILL 400
Cdd:MTH00163 304 MIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
|
410 420 430
....*....|....*....|....*....|....*...
gi 1133407009 401 TGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00163 384 LMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-438 |
3.06e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 311.39 E-value: 3.06e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 37 LSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQNHLQYEPPARKRIFMTTLIVVqpLIIMAFSTTELT 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 117 TFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPltptkywSA 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLS-------SM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 197 LLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPpTNNLLHYPFITLALWGALM 276
Cdd:MTH00150 152 GLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSL-SSSSFSIFLISLSLWGGVL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 277 TSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPL 356
Cdd:MTH00150 231 TSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLML 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 357 LPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTT 436
Cdd:MTH00150 311 YPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKS 390
|
..
gi 1133407009 437 RE 438
Cdd:MTH00150 391 SE 392
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
3.39e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 312.45 E-value: 3.39e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPpKLMWTNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 81 QNHLQYEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 161 LIAILYLNSQTGTLYFPTLKLHPYStpLTPTKYWSALLLNLallmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPS--IYLMNLWWLITILA-----FMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 241 KLGGYGIMRITCLTnPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLF-MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 401 TGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTREHLLMTLHLLPMLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-422 |
1.04e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 308.45 E-value: 1.04e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 8 TIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLTPSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASQNHlqYE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV--FK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 88 PPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 168 NSQTGTLYFPTLkLHPYSTPLTPTKYWSALLLNlallmaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI 247
Cdd:MTH00205 163 NSLNFSLSMFFN-FPLNFSDFYLFLYWIFLMLA------FLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 248 MRITC---LTNPPTNNLlhypFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISH 324
Cdd:MTH00205 236 IRITSmlyKLNSNFSEL----FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAH 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 325 GLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAA 404
Cdd:MTH00205 312 GLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLI 391
|
410
....*....|....*...
gi 1133407009 405 TLLTAAYTLFMLTSTQRG 422
Cdd:MTH00205 392 SFLSGAYSLYLYSQSQHG 409
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-402 |
4.08e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 229.51 E-value: 4.08e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 113 TELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLtptk 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLN---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 193 YWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTnPPTNNLLHYPFITLALW 272
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLY-LPSSPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 273 GALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTQ 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1133407009 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTG 402
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-438 |
2.54e-71 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 233.82 E-value: 2.54e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQYeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYF--PTLKLHPYSTPLTPTKYWsalllnlALLMAFMVKAPLY 214
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFdiAELAAAPLPLTAQLLLFL-------AFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYS 294
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 295 SVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMAL 374
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1133407009 375 PPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFMLtstQR---GTLPPHITTLQNSTTRE 438
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-415 |
1.31e-63 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 213.53 E-value: 1.31e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQYeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYL----NSQTGTLYFPTLklhpYSTPLTPT-KYWsallLNLALLMAFMVKA 211
Cdd:PRK05846 155 GG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADL----LNLPLPPGvQYW----LFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLI 291
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 292 AYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTN 371
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1133407009 372 MALPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFM 415
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-416 |
5.75e-63 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 211.72 E-value: 5.75e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQnhlqYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTG-TLYFPTLKLHPYSTPltpTKYWsallLNLALLMAFMVKAPLYG 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFG---VQTW----LFLAFFIAFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSS 295
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 296 VSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1133407009 376 PTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFML 416
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
3.42e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 199.13 E-value: 3.42e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQYeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL---KLhPYStpltpTKYWsallLNLALLMAFMVKAPL 213
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILlniKL-PLS-----IQKW----LLVGFFLSLAVKIPQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItCLTNPPTNNLLHYPFITL-----ALWGALMTSsmclRQIDLK 288
Cdd:MTH00204 226 IPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRF-SWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:MTH00204 301 RLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1133407009 369 LTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFM 415
Cdd:MTH00204 381 LANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
1.98e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 186.41 E-value: 1.98e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQYeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLtptKYWsallLNLALLMAFMVKAPLYGL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL---QYF----IFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHyPFI-TLALWGALMTSSMCLRQIDLKSLIAYSS 295
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFS-PLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 296 VSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:MTH00217 305 VAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1133407009 376 PTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFM 415
Cdd:MTH00217 385 LSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-438 |
3.37e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 186.28 E-value: 3.37e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 58 IDQTSSPLLTLSCWLTPLMILASQNHLQYeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTPTKYwsallLNLALLMAFMVKAPLYGLH 217
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKW-----IFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 218 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVS 297
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 298 HMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1133407009 378 TNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFMLTSTQRGTLPPHITTLQNSTTRE 438
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-418 |
1.10e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.15 E-value: 1.10e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 94 IFMTTLIVVqpLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIaILYLNSQTGT 173
Cdd:MTH00094 65 LILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-VYLKNFFFFS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 174 LYFPTLKLHpystpltptkywsaLLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL 253
Cdd:MTH00094 142 LCYFDFFLS--------------WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 254 TNPPTNNLlhypFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFC 333
Cdd:MTH00094 208 LNFVYNNF----WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 334 LANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTL 413
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
....*
gi 1133407009 414 FMLTS 418
Cdd:MTH00094 364 FLIVS 368
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-416 |
6.51e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 144.40 E-value: 6.51e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 54 QWT-GIDQTSSPLLTLSCWLTPLMILASQNhLQYEPparkRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLIL 132
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 133 ITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTptkywSALLLNLALLMAFMVKAP 212
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLA-----LELLLYAGFLIAFGVKLP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLA----LWGALMTssmcLRQIDLK 288
Cdd:PRK12561 201 IFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDNVK 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:PRK12561 277 RRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASS 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1133407009 369 LTNMALPPTTNLMAELSIMITLFN-------WSTPTILLTGAATLLTAAYTLFML 416
Cdd:PRK12561 357 MASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-414 |
1.13e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 142.59 E-value: 1.13e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 58 IDQTSSPLLTLSCWLTPLMILASQNHLQYEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL--KLHPYSTPLtptkywsALLLNLALLMAFMVKAPLYG 215
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaaRLAELDPGL-------LLAAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYS 294
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 295 SVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMAL 374
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1133407009 375 PPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLF 414
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFV 423
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-431 |
1.48e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 137.91 E-value: 1.48e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQyeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTptkywSALLLNLALLMAFMVKAPLYGL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-----TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSV 296
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 297 SHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGL---QPLLPLMATWWLLANLTNMA 373
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1133407009 374 LPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFMLTSTQRGTLPPHITTL 431
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-416 |
1.19e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 127.13 E-value: 1.19e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 45 SYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILASqnhlqYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEA 124
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAA-----WPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWEL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 125 TLIPTLILITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYF--PTLKLHPYSTPLTPTKYwsalllnLA 202
Cdd:PRK02546 147 ELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFdmTALAAKDFGLGFQLLCY-------AG 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 203 LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCL 282
Cdd:PRK02546 219 LLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSF 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 283 RQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMAT 362
Cdd:PRK02546 299 AQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFA 378
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1133407009 363 WWLLANLTNMALPPTTNLMAELSIMITL-------FNWSTPTILLTGAATLLTAAYTLFML 416
Cdd:PRK02546 379 MWTACSLASLALPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-416 |
1.83e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 120.44 E-value: 1.83e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQnhlqyePPARK-RIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITR 135
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSM 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 136 WGSQpERLSAGIYFLFYTLISSLPLLIAILYL---NSQTGTLYFPTLKLHPYSTPLTPTKYWSALLLnlallmaFMVKAP 212
Cdd:CHL00011 155 WGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLANQSYPVALEILFYIGFLIA-------YAVKLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITcLTNPPTNNLLHYPFitLALWGALM---TSSMCLRQIDLKS 289
Cdd:CHL00011 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN-MELLPHAHSIFSPW--LVIVGAIQiiyAASTSLGQRNLKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 290 LIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANL 369
Cdd:CHL00011 304 RIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSM 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1133407009 370 TNMALPPTTNLMAELSI---MITLFNWS-TPTILLT---GAATLLTAAYTLFML 416
Cdd:CHL00011 384 ASLALPGMSGFVAELIVffgIITSQKYLlMPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-424 |
2.19e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 114.42 E-value: 2.19e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 57 GIDQTSSPLLTLSCWLTPLMILASQNHLQyeppaRKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTptkywSALLLNLALLMAFMVKAPLYGL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-----TQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHypfITLALWG---ALMTSSMCLRQIDLKSLIAY 293
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGtisVIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 294 SSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGL-QPL--LPLMATWWLLANLT 370
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMA 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1133407009 371 NMALPPTTNLMAELSIMITLFNWSTPTILLTGAATLLTAAYTLFMLTSTQRGTL 424
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
2.90e-26 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 102.22 E-value: 2.90e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 1 MLKIILPTIMLLPTTLLSPPKLMWTNTTTHSLLIATLSLQWLT-PSYYPYKNLTQWTGIDQTSSPLLTLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1133407009 80 SQNHLQYEPPARKRIFMTTLIVVQPLIIMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-411 |
3.92e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.80 E-value: 3.92e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 109 AFSTTELTTFYISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL--KLHPYST 186
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagALAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 187 PLTPTkywsalllnLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL---TNPPTNNLLH 263
Cdd:PRK08375 201 VVTAF---------GFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfgGDFRFALGLG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 264 YPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK08375 272 WLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1133407009 344 SRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFN-WSTPTILLTGAATLLTAAY 411
Cdd:PRK08375 352 TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-414 |
6.55e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.12 E-value: 6.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 58 IDQTSSPLLTLSCWLTPLMILASQNHLQYEppARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 138 SQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFP--TLKLHPYSTPLTPTKY----WSALLLNLALLMAFMVKA 211
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMAdlSAKIRGLSFPLTGGLAgnppLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI------TCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQI 285
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 286 DLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWL 365
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1133407009 366 LANLTNMALPPTTNLMAELSIMITLFNWStptILLTGAATLLTAAYTLF 414
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLV 443
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-411 |
1.22e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 75.76 E-value: 1.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 89 PARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITrWGSQPERLSAGIYFLFYTLISSLPLLIAILYLN 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 169 SQTGTLYFPTLKLHPystpltptkywsaLLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIM 248
Cdd:PRK07234 169 QANGTFAFSGLATAD-------------PEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLV 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 249 RITCLTNPPtnnllhYPFITL-ALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIqthwsfsgAMILMISHGLT 327
Cdd:PRK07234 236 RCALDVPGL------DLIVRIfGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 328 SSMLFCLANTNYERTHSRILLLTQGLQPLLPLmatwwLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLtgaATLL 407
Cdd:PRK07234 302 KSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNL---AAVG 373
|
....
gi 1133407009 408 TAAY 411
Cdd:PRK07234 374 TAAS 377
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
210-400 |
1.58e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.19 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 210 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTN-PPTNNLLHYPFITLALWGALMTSSMCLRQIDLK 288
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 289 SLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*.
gi 1133407009 369 LTNMALPPTTNLMAELSIMITLFN----WSTPTILL 400
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgplLIAILLLL 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-332 |
2.81e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.87 E-value: 2.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 110 FSTTELTTFYISFEATLIPTLILITRwGSQPERLSAGIYFLFyTLISSLPLLIAILYLNSQTGTLYFPTLklhpYSTPLT 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADI----SQGLIN 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 190 PTKYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-------IMRITCLTNPPT---N 259
Cdd:PRK08668 189 DTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfllvlyvLPGTKLFSEFGTyrgV 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1133407009 260 NLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
95-418 |
3.23e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 68.60 E-value: 3.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 95 FMTTLIVVQPLIIMAFSTTELTTFYisfEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTL 174
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 175 YFPTLKlhpYSTPLTPTKYwsalllnLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLT 254
Cdd:PRK08667 193 ELSPLG---ASAGILSLVF-------LLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 255 NPPTnnlLHYPFITLAL--WGALMTSSMCLRQIDLKSLIAYSSVSHMGL--------VIAACM-IQT--HWSFSGAMILM 321
Cdd:PRK08667 263 LSPE---LWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIENIGIilmgiglyVIFGVYgLDTlaLLALGGALFHS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 322 ISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLF-NWSTPTILL 400
Cdd:PRK08667 340 LNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqSFSVADPLI 419
|
330
....*....|....*...
gi 1133407009 401 TgaaTLLTAAYTLFMLTS 418
Cdd:PRK08667 420 K---ILLFSVLAIFALTS 434
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
118-349 |
1.00e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.49 E-value: 1.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 118 FYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFptlKLHPYSTPLTPTKYWsal 197
Cdd:MTH00062 96 FWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---SDWGSDDSVSLIVYY--- 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 198 llnlALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPptNNLLHYPFITLALWGALMT 277
Cdd:MTH00062 170 ----VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFS--GSFLGYLFLCCLFSVFFLI 243
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1133407009 278 SSMclRQIDLKSLIAYSSVSHMglVIAACMIQTHWSFSGAMILMIS--HGLTSSMLFCLANTNYERTHSRILLL 349
Cdd:MTH00062 244 TAC--SELDGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-418 |
2.03e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.99 E-value: 2.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 106 IIMAFSTTELTTFyISFEATLIPTLILITrWGSQPERLSAGIYFLFYTLISSLPL-LIAILYLNSQTGTLYFPTLKLHPY 184
Cdd:PRK06589 130 VLIALSSDLFTMF-VCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 185 STPLtptkywsallLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITC----LTNPPTNN 260
Cdd:PRK06589 208 NQSI----------ILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyifgLSYLQRIF 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 261 LLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06589 278 AEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 341 RTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTI-----LLTGAATLLTAAYTLFM 415
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLsiivmLVVIASSILSALYLLKI 437
|
...
gi 1133407009 416 LTS 418
Cdd:PRK06589 438 LSS 440
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-387 |
2.53e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.76 E-value: 2.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 94 IFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGT 173
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 174 LYFPTLKLHPYSTPlTPTKywsaLLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL 253
Cdd:PRK12665 191 LNMADLAVRLDELP-SGTR----TALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 254 TNPptnnllHYPFITLALWGALMTSSM----CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSS 329
Cdd:PRK12665 266 LFP------GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQT 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1133407009 330 MLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM 387
Cdd:PRK12665 340 TLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-390 |
4.94e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.31 E-value: 4.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 93 RIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQpERLSAGIYFLFYTLISSLPLLIAILYLNSQT- 171
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 172 -----GTLYFPTLKLHpySTPLTPTkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG 246
Cdd:PRK08676 181 qalgtGTLNWTELAAH--ASLLSPS---VLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 247 IMRITCLTNPP------TNNLLHYPFITLALWGALMtssmcLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMIL 320
Cdd:PRK08676 256 ILRLSALLRQSgaaeqfSNVLIGLGIFSIAVAAFSM-----LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFH 330
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 321 MISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITL 390
Cdd:PRK08676 331 MLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-412 |
9.40e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.50 E-value: 9.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 111 STTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTP 190
Cdd:PRK08376 139 ITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVV 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 191 TKywsalLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPiaGSMLLAALLLKLGG-YGIMRITCLTNPPTNNLLHYPF--I 267
Cdd:PRK08376 219 AK-----IALALFIAGLAMKSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARVLFSIYGPAINLATVGWviI 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 268 TLALWGALMTSSMCLRQIDLKSLIAYSSVSHMG---------LVIAACMIQTHWSF---SGAMILMISHGLTSSMLFCLA 335
Cdd:PRK08376 292 ILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTA 371
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1133407009 336 NTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMIT--LFNWSTPTILLTGAAtLLTAAYT 412
Cdd:PRK08376 372 GAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSV-LTLASFV 449
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
117-413 |
3.04e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 59.29 E-value: 3.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 117 TFYISFEATLIPTLILITRWGSQPErlSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLkLHpystpltpTKYWSA 196
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI-LH--------SDVWAE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 197 LLLNLALLMAFMV-----KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL-TNPPTNNLLhypFITLA 270
Cdd:PRK12650 203 KPGLTTVVAVLIAvaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVfHDVAVWNWL---LIIVG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 271 LWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLT 350
Cdd:PRK12650 280 MITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRL 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1133407009 351 QGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSiMITLFnWSTP-----TILLTGAATL---LTAAYTL 413
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEG-MLTAF-LEAPggnagVVLLLVGAALgavFTFAYSA 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-376 |
4.02e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.42 E-value: 4.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 109 AFSTTELTTFYISFEATLIPTLILITrWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPL 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 189 TPTkywsALLLNLALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFIT 268
Cdd:PRK12663 203 TAT----LTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLAT 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 269 LALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 348
Cdd:PRK12663 278 MAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQ 357
|
250 260
....*....|....*....|....*...
gi 1133407009 349 LTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-406 |
4.12e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 58.42 E-value: 4.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 106 IIMAFSTTELTTFYISFEATLIPTLILITRWGSQPErLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL-----K 180
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsvkiaE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 181 LHPYSTPLtptkywsALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNN 260
Cdd:PRK07691 200 LSAGQTGL-------ITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 261 LLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK07691 273 FTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIK 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 341 RTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFN----WSTPTILLTGAATL 406
Cdd:PRK07691 353 ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
209-387 |
8.83e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 8.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 209 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT--------CLTNPPTNNLlhypFITLALWGALMTSSM 280
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV----FMILAALAIVFGSVL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 281 CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltqGLQPLL 357
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSM 373
|
170 180 190
....*....|....*....|....*....|
gi 1133407009 358 PLMATWWLLANLTNMALPPTTNLMAELSIM 387
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-417 |
1.32e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 57.08 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 155 ISSLPLLIAILYLNSQTGTLYFptLKLHPYSTPLTPTkywSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNM--AHIAQLAGTIDPT---VAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVM 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 235 LAALLLKLGGYGIMRITCLTNPPT--NNLLHYpFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHW 312
Cdd:PRK08377 244 FSAFVVKAGLYAMARILYLMQNANgwSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQA 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 313 SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFN 392
Cdd:PRK08377 323 GVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
250 260
....*....|....*....|....*..
gi 1133407009 393 --WSTPTILLTGAATLLTAAYTLFMLT 417
Cdd:PRK08377 403 agYTWPVALVLGASVVEAVYYFRLIHT 429
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
267-428 |
3.32e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 55.93 E-value: 3.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 267 ITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 346
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 347 LLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAATL---LTAAYT--LFMLT--ST 419
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSfrLFFLVffGK 435
|
....*....
gi 1133407009 420 QRGTLPPHI 428
Cdd:COG1009 436 PRPKTPKHP 444
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
266-406 |
2.23e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.38 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 266 FITLALWGA---LMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:PRK12647 259 QTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1133407009 343 HSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTPTILLTGAATL 406
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
119-419 |
2.40e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 53.22 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 119 YISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTlyfptlklHPYSTPLTPTKYWSALL 198
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT--------NNITEILGQADHIKNHG 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 199 LNLALLMAFMV----KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITCLTNppTNNLLHYPFITLALWG 273
Cdd:PRK12646 208 LFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG--LSNMYIYIVTFVGLIT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 274 ALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMI------QTHWSFS--------GAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK12646 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIID 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 340 ERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNW---------STPTILLTGA-ATLLTA 409
Cdd:PRK12646 365 HEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfsliSMIIIVFIGViASIFTF 444
|
330
....*....|
gi 1133407009 410 AYTLFMLTST 419
Cdd:PRK12646 445 TYALYMVKEV 454
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
140-376 |
4.23e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 4.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 140 PERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPystpLTPtkyWSALLLNLALLMAFMVKAPLYGLHLW 219
Cdd:PRK06521 160 AEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAH----LSP---FWASLVFLLALFGFGAKAGLVPLHVW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 220 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCltnpptnNLLHYPfitLALWGALM------TSSM----CLRQIDLKS 289
Cdd:PRK06521 233 LPRAHPAAPSHVSALMSGVMLKVAIYGILRVVF-------DLLGAP---GWWWGVLVlalgaiSAVLgvlyALAEHDLKR 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 290 LIAYSSVSHMGLVIAA---CMI--------QTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLP 358
Cdd:PRK06521 303 LLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
250
....*....|....*...
gi 1133407009 359 LMATWWLLANLTNMALPP 376
Cdd:PRK06521 383 WTAWAFLIGCLAISALPP 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-328 |
1.15e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.42 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 75 LMILASQNHLQYEPPARKRIFMTTLIVVQPLIIMAfSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGI-YFLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 154 LISSLPLL-IAILYLnsQTGTLYFPTLKLHPYSTPLTPTkywsalllNLALLMAFMV-----KAPLYGLHLWLPKAHVEA 227
Cdd:COG1007 164 LSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGANSP--------LLLLGLVLVLaglafKLSAVPFHMWTPDVYEGA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 228 PIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLA----LWGALMTssmcLRQIDLKSLIAYSSVSHMGLVI 303
Cdd:COG1007 234 PTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLL 309
|
250 260
....*....|....*....|....*
gi 1133407009 304 AACMIQTHWSFSGAMILMISHGLTS 328
Cdd:COG1007 310 LGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
261-376 |
1.75e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 261 LLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 1133407009 341 RTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-413 |
4.27e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 4.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 95 FMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 175 YFPTLKlhpYSTPLTPTKywSALLLNLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITcl 253
Cdd:MTH00020 193 DFSSVF---NMVVSAPSS--DITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSS-- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 254 tnpPTNNLLHYPFITLALWGAL---MTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIqTHWSFSgaMILMISHGLTSSM 330
Cdd:MTH00020 265 ---PLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 331 LFCLANtnyerthSRILLLTQ--------GLQPLLPLMATWWLLANLTNMALPPTTNLMA-ELSIMITLF-NWSTPTILL 400
Cdd:MTH00020 339 LFLSAG-------SVIHALSDeqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWL 411
|
330
....*....|...
gi 1133407009 401 TGAATLLTAAYTL 413
Cdd:MTH00020 412 GCFSALLTAFYSI 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
99-344 |
9.38e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.55 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 99 LIVVQPLIIMAfSTTELTTFYISFEATLIPTLILITRWGSQPERLSAGI-YFLFYTLISSLPLL-IAILYLnsQTGTLYF 176
Cdd:TIGR01770 109 LFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYG--FTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 177 PTLKLHPYSTPLTptkYWSALLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTNP 256
Cdd:TIGR01770 186 EDLLLFLSNGMLN---ISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 257 PTNNLLHYPFITLALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTS----SMLF 332
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250
....*....|..
gi 1133407009 333 CLANTNYERTHS 344
Cdd:TIGR01770 343 LLRSYKDEWIEY 354
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-378 |
1.09e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 59 DQTSSPLLTLSCWLTPLMILASQNHLQYEPPARKriFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 139 QPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLKLHPYSTPLTPTKYWSALLLNLALLMAFMV--------- 209
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSGIMDRGYYGGGAYESPLAPFAIIgillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 210 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMritcLTNPPTNNLLHYPFITLALWGAL---MTSSMCLRQI 285
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM----IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 286 DLKSLIAYSSVSHMGLVIaaCMIQTHWSFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltQGLQPLLPLM 360
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330
....*....|....*...
gi 1133407009 361 ATWWLLANLTNMALPPTT 378
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLT 404
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
110-419 |
1.78e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.81 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 110 FSTTELTTFyISFEATLIPTLILITRWGSqPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL-KLHPystpl 188
Cdd:PRK06525 131 YSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsGLHG----- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 189 tPTKYWSALLLNLALLMafmvKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFIT 268
Cdd:PRK06525 204 -SLKYLVFLGILFAAWG----KSAQLPFYSWLPDA-MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 269 LALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWS---FSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK06525 278 MAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSIAYIFNHAFAKSLFFLVAGALSYSCGTR 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1133407009 346 ILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFnwstptiLLTGAATLLTAAYTLFMLTST 419
Cdd:PRK06525 358 LLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGF-------ELSVEYWILLPAMVLLLIESV 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
117-332 |
2.99e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 43.34 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 117 TFYISFEATLIPTLILItrWGS-QPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTLklhpysTPLTPTKYWs 195
Cdd:PRK12668 117 TLFVFWELMAFTSTFLV--WARgTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAI------AGLGGTAAW- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 196 alllnlALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITcltnpPTNNLLHYPFITLALWGAL 275
Cdd:PRK12668 188 ------LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF-----PGTELLIYIGAAMAVYGVF 256
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1133407009 276 MTssmcLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK12668 257 FA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
280-328 |
3.62e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.89 E-value: 3.62e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1133407009 280 MCLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTS 328
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
207-394 |
5.74e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.80 E-value: 5.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 207 FMVKAPLYGLHLWLPkahveaPIAGSMLLAALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSMCLRQID 286
Cdd:MTH00144 94 LCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQ 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 287 LKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGltsSMLFCLANTNYerthSRILLLTQGLQPLLPLMATWWLL 366
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG---FLFFSLWSGDS----GSMKDLGSLKPSYKTGLSIISLL 240
|
170 180
....*....|....*....|....*...
gi 1133407009 367 ANLtnMALPPTTNLMAELSIMITLFNWS 394
Cdd:MTH00144 241 LSL--GGLPPFLGFCSKLLVLISSMESS 266
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
210-415 |
5.93e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.60 E-value: 5.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 210 KAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITcltnPPTNNLLHYPFITLALWGALMTSS--M 280
Cdd:PRK12644 216 KSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA----PGFADVPVWRPTVLVLGLATMLLGgwR 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 281 CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLM 360
Cdd:PRK12644 285 ALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1133407009 361 ATWWLLANLTNMALPPTTNLMAELSIMITLFNWSTP----TILLTGAA--TLLTAAYTL-FM 415
Cdd:PRK12644 365 AVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlgSILTVAYSLrFL 426
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-335 |
1.11e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 41.37 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 137 GSQPERLSAGIYFLFYTLISSLPLLIAILYLNSQTGTLYFPTL-----KLHPYSTPLtptkywsALLLNLALLMAFMVKA 211
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLaqriaQLPAADRAL-------LEAGAALLLVVFLIKA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 212 PLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITCLTNPPTNNLLHYPFITLALWGALMTSSM----CLRQI 285
Cdd:PRK12666 225 AMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQ 301
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1133407009 286 DLKSLIAYSSVSHMGLVIAACMIQTHWSFSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK12666 302 RLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-302 |
6.00e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.99 E-value: 6.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 78 LASQNHLQYEPPARKRIFMTTLIVVQPLIIMAFSTTELTTFYISFEATLIPTLILITRwGSQPERLSAGIYFLFYTLISS 157
Cdd:PRK06591 100 ITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133407009 158 LPLLIAILYLNSQTGTL--YFPTLKLHPYSTPLTPTkywsalLLNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLL 235
Cdd:PRK06591 179 TLILIAIGFLLSITGSLnmTDIAAYLQEHTNSRIIT------IAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYL 252
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1133407009 236 AALLLKLGGYGIMRIT-CLTNPPTNNLLHYPFIT-LALWGALMTSSMCLRQIDLKSLIAYSSVSHMGLV 302
Cdd:PRK06591 253 AGISTIIGIYIIYKFTyIIIGYETIKTAITNFIRpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| |
