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Conserved domains on  [gi|1125209167|gb|OLB60432|]
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hypothetical protein AUI13_00290 [Gemmatimonadetes bacterium 13_2_20CM_2_69_23]

Protein Classification

DUF2277 domain-containing protein( domain architecture ID 10009426)

DUF2277 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5552 COG5552
Uncharacterized conserved protein, DUF2277 domain [Function unknown];
1-90 2.49e-41

Uncharacterized conserved protein, DUF2277 domain [Function unknown];


:

Pssm-ID: 444295  Cd Length: 90  Bit Score: 130.77  E-value: 2.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125209167  1 MCRNIKTLANFAPPATDDEIRASALQFVRKLSGTARPSQVNEAVFNRAVDEVTVAAHRLIHSLRTSAPPRDREAERRKAH 80
Cdd:COG5552    1 MCRNIRTLFNFEPPATDDEIRAAALQYVRKVSGTTKPSKANEEAFDRAVAEIAAATRRLLDSLVTRAPPRDREEEAAKAR 80

                         90
                 ....*....|
gi 1125209167 81 QRALERFGPR 90
Cdd:COG5552   81 ARAAKRFARA 90
 
Name Accession Description Interval E-value
COG5552 COG5552
Uncharacterized conserved protein, DUF2277 domain [Function unknown];
1-90 2.49e-41

Uncharacterized conserved protein, DUF2277 domain [Function unknown];


Pssm-ID: 444295  Cd Length: 90  Bit Score: 130.77  E-value: 2.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125209167  1 MCRNIKTLANFAPPATDDEIRASALQFVRKLSGTARPSQVNEAVFNRAVDEVTVAAHRLIHSLRTSAPPRDREAERRKAH 80
Cdd:COG5552    1 MCRNIRTLFNFEPPATDDEIRAAALQYVRKVSGTTKPSKANEEAFDRAVAEIAAATRRLLDSLVTRAPPRDREEEAAKAR 80

                         90
                 ....*....|
gi 1125209167 81 QRALERFGPR 90
Cdd:COG5552   81 ARAAKRFARA 90
DUF2277 pfam10041
Uncharacterized conserved protein (DUF2277); Members of this family of hypothetical bacterial ...
 1-74 2.27e-34

Uncharacterized conserved protein (DUF2277); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 431009  Cd Length: 74  Bit Score: 112.71  E-value: 2.27e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1125209167  1 MCRNIKTLANFAPPATDDEIRASALQFVRKLSGTARPSQVNEAVFNRAVDEVTVAAHRLIHSLRTSAPPRDREA 74
Cdd:pfam10041  1 MCRNITTLRNFEPPATDDEIRAAALQYVRKVSGFTKPSAANEEAFDRAVAEVAAATRRLLDALPTRAPPLRREE 74
 
Name Accession Description Interval E-value
COG5552 COG5552
Uncharacterized conserved protein, DUF2277 domain [Function unknown];
1-90 2.49e-41

Uncharacterized conserved protein, DUF2277 domain [Function unknown];


Pssm-ID: 444295  Cd Length: 90  Bit Score: 130.77  E-value: 2.49e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125209167  1 MCRNIKTLANFAPPATDDEIRASALQFVRKLSGTARPSQVNEAVFNRAVDEVTVAAHRLIHSLRTSAPPRDREAERRKAH 80
Cdd:COG5552    1 MCRNIRTLFNFEPPATDDEIRAAALQYVRKVSGTTKPSKANEEAFDRAVAEIAAATRRLLDSLVTRAPPRDREEEAAKAR 80

                         90
                 ....*....|
gi 1125209167 81 QRALERFGPR 90
Cdd:COG5552   81 ARAAKRFARA 90
DUF2277 pfam10041
Uncharacterized conserved protein (DUF2277); Members of this family of hypothetical bacterial ...
 1-74 2.27e-34

Uncharacterized conserved protein (DUF2277); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 431009  Cd Length: 74  Bit Score: 112.71  E-value: 2.27e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1125209167  1 MCRNIKTLANFAPPATDDEIRASALQFVRKLSGTARPSQVNEAVFNRAVDEVTVAAHRLIHSLRTSAPPRDREA 74
Cdd:pfam10041  1 MCRNITTLRNFEPPATDDEIRAAALQYVRKVSGFTKPSAANEEAFDRAVAEVAAATRRLLDALPTRAPPLRREE 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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