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Conserved domains on  [gi|1122780905|ref|NP_001334853|]
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sorting nexin-19 isoform 9 [Homo sapiens]

Protein Classification

PX domain-containing protein( domain architecture ID 10554431)

PX (Phox Homology) domain-containing protein with PXA (PX associated) and nexin C-terminal domains, may bind phosphoinositides; with similarity to sorting nexin-14 but lacking the regulator of G protein signaling (RGS) domain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
178-285 1.49e-32

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


:

Pssm-ID: 462541  Cd Length: 111  Bit Score: 116.94  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1122780905 178 WLCTENM---QKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKfPRPVRTQEQKLAAEKQALQSL 254
Cdd:pfam08628   1 WLRRRALnalKQVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAE-PPPERTEEEKLRTRKEARKLL 79
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1122780905 255 MGVLPDLVVEILGVNKCRLSWGLVLESLQQP 285
Cdd:pfam08628  80 LSLIPDALGSVVGRENAREAARRVFDMLQNP 110
PX_domain super family cl02563
The Phox Homology domain, a phosphoinositide binding module; The PX domain is a ...
1-22 4.16e-03

The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.


The actual alignment was detected with superfamily member cd06893:

Pssm-ID: 470617 [Multi-domain]  Cd Length: 132  Bit Score: 36.75  E-value: 4.16e-03
                          10        20
                  ....*....|....*....|..
gi 1122780905   1 MDSDRVEARKSLLESFLKMVVS 22
Cdd:cd06893    94 MDKDKIEARRGLLETFLRQLCS 115
 
Name Accession Description Interval E-value
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
178-285 1.49e-32

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


Pssm-ID: 462541  Cd Length: 111  Bit Score: 116.94  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1122780905 178 WLCTENM---QKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKfPRPVRTQEQKLAAEKQALQSL 254
Cdd:pfam08628   1 WLRRRALnalKQVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAE-PPPERTEEEKLRTRKEARKLL 79
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1122780905 255 MGVLPDLVVEILGVNKCRLSWGLVLESLQQP 285
Cdd:pfam08628  80 LSLIPDALGSVVGRENAREAARRVFDMLQNP 110
PX_SNX19 cd06893
The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a ...
1-22 4.16e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX19 contains an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. These domains are also found in SNX13 and SNX14, which also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNX19 interacts with IA-2, a major autoantigen found in type-1 diabetes. It inhibits the conversion of phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] to PI(3,4,5)P3, which leads in the decrease of protein phosphorylation in the Akt signaling pathway, resulting in apoptosis. SNX19 may also be implicated in coronary heart disease and thyroid oncocytic tumors.


Pssm-ID: 132803 [Multi-domain]  Cd Length: 132  Bit Score: 36.75  E-value: 4.16e-03
                          10        20
                  ....*....|....*....|..
gi 1122780905   1 MDSDRVEARKSLLESFLKMVVS 22
Cdd:cd06893    94 MDKDKIEARRGLLETFLRQLCS 115
 
Name Accession Description Interval E-value
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
178-285 1.49e-32

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


Pssm-ID: 462541  Cd Length: 111  Bit Score: 116.94  E-value: 1.49e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1122780905 178 WLCTENM---QKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKfPRPVRTQEQKLAAEKQALQSL 254
Cdd:pfam08628   1 WLRRRALnalKQVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAE-PPPERTEEEKLRTRKEARKLL 79
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1122780905 255 MGVLPDLVVEILGVNKCRLSWGLVLESLQQP 285
Cdd:pfam08628  80 LSLIPDALGSVVGRENAREAARRVFDMLQNP 110
PX_SNX19 cd06893
The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a ...
1-22 4.16e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX19 contains an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. These domains are also found in SNX13 and SNX14, which also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNX19 interacts with IA-2, a major autoantigen found in type-1 diabetes. It inhibits the conversion of phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] to PI(3,4,5)P3, which leads in the decrease of protein phosphorylation in the Akt signaling pathway, resulting in apoptosis. SNX19 may also be implicated in coronary heart disease and thyroid oncocytic tumors.


Pssm-ID: 132803 [Multi-domain]  Cd Length: 132  Bit Score: 36.75  E-value: 4.16e-03
                          10        20
                  ....*....|....*....|..
gi 1122780905   1 MDSDRVEARKSLLESFLKMVVS 22
Cdd:cd06893    94 MDKDKIEARRGLLETFLRQLCS 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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