|
Name |
Accession |
Description |
Interval |
E-value |
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
1-472 |
0e+00 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 905.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 1 MGDPSGFLKHtSRELPVRRPVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDG 80
Cdd:PRK12810 1 MGKPTGFLEY-DRVDPKKRPVAERIKDFKEFYEPFSEEQAKIQAARCMDCGIPFCHWGCPVHNYIPEWNDLVYRGRWEEA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 81 IERLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAA 160
Cdd:PRK12810 80 AERLHQTNNFPEFTGRVCPAPCEGACTLNINFGPVTIKNIERYIIDKAFEEGWVKPDPPVKRTGKKVAVVGSGPAGLAAA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 161 QQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGAT 240
Cdd:PRK12810 160 DQLARAGHKVTVFERADRIGGLLRYGIPDFKLEKEVIDRRIELMEAEGIEFRTNVEVGKDITAEELLAEYDAVFLGTGAY 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 241 EARDLPIPGRELDGIHQAMEFLPIANRVQLGDLEEPTITAEGKKVVIIGGGDTGADCLGTSHRQGAESVHQFEIMPRPPE 320
Cdd:PRK12810 240 KPRDLGIPGRDLDGVHFAMDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGDTGMDCVGTAIRQGAKSVTQRDIMPMPPS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 321 TRAEHTPWPTYPLMYRVASAHEEGGERLFSVNTERFVGADGKVTALKAHEVEMKSGRFEKVEGSDFELEADLVLLAMGFV 400
Cdd:PRK12810 320 RRNKNNPWPYWPMKLEVSNAHEEGVEREFNVQTKEFEGENGKVTGVKVVRTELGEGDFEPVEGSEFVLPADLVLLAMGFT 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1120505585 401 GPEkPGLLTDLGVDLNERGNVARS-AKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGESALP 472
Cdd:PRK12810 400 GPE-AGLLAQFGVELDERGRVAAPdNAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAIDAYLMGSTALP 471
|
|
| GOGAT_sm_gam |
TIGR01317 |
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for ... |
3-472 |
0e+00 |
|
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Pssm-ID: 162300 [Multi-domain] Cd Length: 485 Bit Score: 773.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 3 DPSGFLKHTSRELPVRRPVpLRLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHN--GCPLGNLIPEWNDLVYKDRWHDG 80
Cdd:TIGR01317 1 KPTGFLEYKRRKPTERDPR-TRLKDWKEFTNPFDKESAKYQAARCMDCGTPFCHNdsGCPLNNLIPEFNDLVFRGRWKEA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 81 IERLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAA 160
Cdd:TIGR01317 80 LDRLHATNNFPEFTGRVCPAPCEGACTLGISEDPVGIKSIERIIIDKGFQEGWVQPRPPSKRTGKKVAVVGSGPAGLAAA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 161 QQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGAT 240
Cdd:TIGR01317 160 DQLNRAGHTVTVFEREDRCGGLLMYGIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGVDISADELKEQFDAVVLAGGAT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 241 EARDLPIPGRELDGIHQAMEFLPIANRVQLGD--LEEPTITAEGKKVVIIGGGDTGADCLGTSHRQGAESVHQFEIMPRP 318
Cdd:TIGR01317 240 KPRDLPIPGRELKGIHYAMEFLPSATKALLGKdfKDIIFIKAKGKKVVVIGGGDTGADCVGTSLRHGAASVHQFEIMPKP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 319 PETRAEHTPWPTYPLMYRVASAHEEGGE------RLFSVNTERFVGAD-GKVTALKAHEVEMK---SGR--FEKVEGSDF 386
Cdd:TIGR01317 320 PEARAKDNPWPEWPRVYRVDYAHEEAAAhygrdpREYSILTKEFIGDDeGKVTALRTVRVEWKksqDGKwqFVEIPGSEE 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 387 ELEADLVLLAMGFVGPEKPgLLTDLGVDLNERGNVARS-AKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYL 465
Cdd:TIGR01317 400 VFEADLVLLAMGFVGPEQI-LLDDFGVKKTRRGNISAGyDDYSTSIPGVFAAGDCRRGQSLIVWAINEGRKAAAAVDRYL 478
|
....*..
gi 1120505585 466 EGESALP 472
Cdd:TIGR01317 479 MGSSVLP 485
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
24-464 |
0e+00 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 646.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 24 RLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPAPCE 103
Cdd:COG0493 1 RIKDFREVYPGLSEEEAIEQAARCLDCGDPPCQTGCPVGNDIPEWIRLIAEGDYEEALELIHETNPFPEVCGRVCPAPCE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 104 ASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLL 183
Cdd:COG0493 81 GACVRGIVDEPVAIGALERFIADKAFEEGWVKPPPPAPRTGKKVAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 184 RYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLP 263
Cdd:COG0493 161 RYGIPEFRLPKDVLDREIELIEALGVEFRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 264 IANRVQLGDleepTITAEGKKVVIIGGGDTGADCLGTSHRQGAESVHQFEIMPRppetraEHTPwptyPLMYRVASAHEE 343
Cdd:COG0493 241 AVNLGEAPD----TILAVGKRVVVIGGGNTAMDCARTALRLGAESVTIVYRRTR------EEMP----ASKEEVEEALEE 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 344 GGERLFSVNTERFVG-ADGKVTALKAHEVEM----KSGR--FEKVEGSDFELEADLVLLAMGFVGPEkPGLLTDLGVDLN 416
Cdd:COG0493 307 GVEFLFLVAPVEIIGdENGRVTGLECVRMELgepdESGRrrPVPIEGSEFTLPADLVILAIGQTPDP-SGLEEELGLELD 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1120505585 417 ERGNVARSAK-WATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAY 464
Cdd:COG0493 386 KRGTIVVDEEtYQTSLPGVFAGGDAVRGPSLVVWAIAEGRKAARAIDRY 434
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
9-470 |
5.79e-166 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 476.21 E-value: 5.79e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 9 KHTSRELPVRRPVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATN 88
Cdd:PRK11749 4 LTTPRIPMPRQDAEERAQNFDEVAPGYTPEEAIEEASRCLQCKDAPCVKACPVSIDIPEFIRLIAEGNLKGAAETILETN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 89 NFPEFTGRLCPAP--CEASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPVhPTRSTGKKVAVVGSGPAGLAAAQQLTRA 166
Cdd:PRK11749 84 PLPAVCGRVCPQErlCEGACVRGKKGEPVAIGRLERYITDWAMETGWVLFK-RAPKTGKKVAVIGAGPAGLTAAHRLARK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 167 GHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLP 246
Cdd:PRK11749 163 GYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTEVGRDITLDELRAGYDAVFIGTGAGLPRFLG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 247 IPGRELDGIHQAMEFLPIANRVqlgdlEEPTITAEGKKVVIIGGGDTGADCLGTSHRQGAESVHqfeIMPRppETRAEht 326
Cdd:PRK11749 243 IPGENLGGVYSAVDFLTRVNQA-----VADYDLPVGKRVVVIGGGNTAMDAARTAKRLGAESVT---IVYR--RGREE-- 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 327 pwptyplM----YRVASAHEEGGERLFSVNTERFVGADGKVTALKAHEVEM----KSGR-FEKVEGSDFELEADLVLLAM 397
Cdd:PRK11749 311 -------MpaseEEVEHAKEEGVEFEWLAAPVEILGDEGRVTGVEFVRMELgepdASGRrRVPIEGSEFTLPADLVIKAI 383
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1120505585 398 GFvGPEKPGLLTDLGVDLNERGNVARS-AKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGESA 470
Cdd:PRK11749 384 GQ-TPNPLILSTTPGLELNRWGTIIADdETGRTSLPGVFAGGDIVTGAATVVWAVGDGKDAAEAIHEYLEGAAS 456
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
53-483 |
1.09e-88 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 281.76 E-value: 1.09e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 53 PFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVELIDRAFDEG 132
Cdd:PRK12771 47 PPCNAACPAGEDIRGWLALVRGGDYEYAWRRLTKDNPFPAVMGRVCYHPCESGCNRGQVDDAVGINAVERFLGDYAIANG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 133 WVKPVhPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFK 212
Cdd:PRK12771 127 WKFPA-PAPDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVR 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 213 TGVNVGVDITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLPianrvQLGDLEEPTItaeGKKVVIIGGGD 292
Cdd:PRK12771 206 LGVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLR-----AVGEGEPPFL---GKRVVVIGGGN 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 293 TGADCLGTSHRQGAESV-------------HQFEIMprppetraehtpwptyplmyrvaSAHEEGGERLFSVNTERFVGA 359
Cdd:PRK12771 278 TAMDAARTARRLGAEEVtivyrrtredmpaHDEEIE-----------------------EALREGVEINWLRTPVEIEGD 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 360 DGKVTALKAHEVEMK----SGRFEKVEGSDFELEADLVLLAMG----FVGPEK-PGLLTDLG---VDLNERgnvarsakw 427
Cdd:PRK12771 335 ENGATGLRVITVEKMeldeDGRPSPVTGEEETLEADLVVLAIGqdidSAGLESvPGVEVGRGvvqVDPNFM--------- 405
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1120505585 428 ATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGESALPSPIATTTAPQR 483
Cdd:PRK12771 406 MTGRPGVFAGGDMVPGPRTVTTAIGHGKKAARNIDAFLGGEPYEHRPKREIVKFDK 461
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
13-465 |
4.85e-88 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 282.79 E-value: 4.85e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 13 RELPVRRPVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGI-PFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFP 91
Cdd:PRK12769 193 RGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEhSICEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNSLP 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 92 EFTGRLCPAP--CEASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHM 169
Cdd:PRK12769 273 EITGRVCPQDrlCEGACTLRDEYGAVTIGNIERYISDQALAKGWRPDLSQVTKSDKRVAIIGAGPAGLACADVLARNGVA 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 170 VTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLPIPG 249
Cdd:PRK12769 353 VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDISLESLLEDYDAVFVGVGTYRSMKAGLPN 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 250 RELDGIHQAMEFLpIANRVQLGDLE----EPTITAEGKKVVIIGGGDTGADCLGTSHRQGAESVhqfeimprppeTRAEH 325
Cdd:PRK12769 433 EDAPGVYDALPFL-IANTKQVMGLEelpeEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNV-----------TCAYR 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 326 TPWPTYPLMYR-VASAHEEGGERLFSVN-TERFVGADGKVTALKAHEVEM----KSGRFEK--VEGSDFELEADLVLLAM 397
Cdd:PRK12769 501 RDEANMPGSKKeVKNAREEGANFEFNVQpVALELNEQGHVCGIRFLRTRLgepdAQGRRRPvpIPGSEFVMPADAVIMAF 580
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1120505585 398 GFvGPEKPGLLTDLGVDLNERGNVARSA----KWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYL 465
Cdd:PRK12769 581 GF-NPHGMPWLESHGVTVDKWGRIIADVesqyRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWL 651
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
16-469 |
2.66e-85 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 269.97 E-value: 2.66e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 16 PVR-RPVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFT 94
Cdd:PRK12831 10 PVReQDPEVRATNFEEVCLGYNEEEAVKEASRCLQCKKPKCVKGCPVSINIPGFISKLKEGDFEEAAKIIAKYNALPAVC 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 95 GRLCP--APCEASCVLGINQDPVTIKQVEVELIDRAFDEGwVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTV 172
Cdd:PRK12831 90 GRVCPqeSQCEGKCVLGIKGEPVAIGKLERFVADWARENG-IDLSETEEKKGKKVAVIGSGPAGLTCAGDLAKMGYDVTI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 173 FERADRIGGLLRYGIPEFKMEKRHI-DRRLDQMNSEGTVFKTGVNVGVDITADALREQ--FDAVVLAGGATEARDLPIPG 249
Cdd:PRK12831 169 FEALHEPGGVLVYGIPEFRLPKETVvKKEIENIKKLGVKIETNVVVGKTVTIDELLEEegFDAVFIGSGAGLPKFMGIPG 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 250 RELDGIHQAMEFLpiaNRVQLGDLEEP---TITAEGKKVVIIGGGDTGADCLGTSHRQGAEsVHqfeIMPRPPE----TR 322
Cdd:PRK12831 249 ENLNGVFSANEFL---TRVNLMKAYKPeydTPIKVGKKVAVVGGGNVAMDAARTALRLGAE-VH---IVYRRSEeelpAR 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 323 AEhtpwptyplmyRVASAHEEGGERLFSVNTERFVG-ADGKVTALKAHEVEMK----SGRFEKV--EGSDFELEADLVLL 395
Cdd:PRK12831 322 VE-----------EVHHAKEEGVIFDLLTNPVEILGdENGWVKGMKCIKMELGepdaSGRRRPVeiEGSEFVLEVDTVIM 390
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1120505585 396 AMGfVGPEKPGLLTDLGVDLNERGN-VARSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGES 469
Cdd:PRK12831 391 SLG-TSPNPLISSTTKGLKINKRGCiVADEETGLTSKEGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSKKW 464
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
42-468 |
6.62e-78 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 258.13 E-value: 6.62e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 42 TQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCP--APCEASCVLGI-NQDPVTIK 118
Cdd:PRK12778 326 TEAKRCLDCKNPGCVEGCPVGIDIPRFIKNIERGNFLEAAKILKETSALPAVCGRVCPqeKQCESKCIHGKmGEEAVAIG 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 119 QVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHID 198
Cdd:PRK12778 406 YLERFVADYERESGNISVPEVAEKNGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVLKYGIPEFRLPKKIVD 485
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 199 RRLDQMNSEGTVFKTGVNVGVDITADALREQ-FDAVVLAGGATEARDLPIPGRELDGIHQAMEFLpiaNRVQLGDLEEP- 276
Cdd:PRK12778 486 VEIENLKKLGVKFETDVIVGKTITIEELEEEgFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYL---TRVNLMDAASPd 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 277 --TITAEGKKVVIIGGGDTGADCLGTSHRQGAESV-----HQFEIMPrppeTRAEhtpwptyplmyRVASAHEEGGERLF 349
Cdd:PRK12778 563 sdTPIKFGKKVAVVGGGNTAMDSARTAKRLGAERVtivyrRSEEEMP----ARLE-----------EVKHAKEEGIEFLT 627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 350 SVNTERFVG-ADGKVTALKAHEVEM----KSGRFEKV--EGSDFELEADLVLLAMGfVGPEKPGLLTDLGVDLNERGNVA 422
Cdd:PRK12778 628 LHNPIEYLAdEKGWVKQVVLQKMELgepdASGRRRPVaiPGSTFTVDVDLVIVSVG-VSPNPLVPSSIPGLELNRKGTIV 706
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1120505585 423 RSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGE 468
Cdd:PRK12778 707 VDEEMQSSIPGIYAGGDIVRGGATVILAMGDGKRAAAAIDEYLSSK 752
|
|
| gltA |
TIGR01316 |
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of ... |
20-465 |
6.51e-76 |
|
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 130383 [Multi-domain] Cd Length: 449 Bit Score: 245.16 E-value: 6.51e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 20 PVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGIPF--CHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRL 97
Cdd:TIGR01316 1 PPEERSKLFQEAALGYTEQLALVEAQRCLNCKDATkpCIKGCPVHVPIPEFIAKIQEGDFKGAVDIIKTTSLLPAICGRV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 98 CPAP--CEASCVLGINQ----DPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVT 171
Cdd:TIGR01316 81 CPQErqCEGQCTVGKMFkdvgKPVSIGALERFVADWERQHGIETEPEKAPSTHKKVAVIGAGPAGLACASELAKAGHSVT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 172 VFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLPIPGRE 251
Cdd:TIGR01316 161 VFEALHKPGGVVTYGIPEFRLPKEIVVTEIKTLKKLGVTFRMNFLVGKTATLEELFSQYDAVFIGTGAGLPKLMNIPGEE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 252 LDGIHQAMEFLPIANRVQLGDL-EEPTITAEGKKVVIIGGGDTGADCLGTSHRQGAEsVHqfeIMPRppETRAEHTpwpt 330
Cdd:TIGR01316 241 LCGVYSANDFLTRANLMKAYEFpHADTPVYAGKSVVVIGGGNTAVDSARTALRLGAE-VH---CLYR--RTREDMT---- 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 331 yPLMYRVASAHEEGGERLFSVNTERFVG-ADGKVTALK------AHEVEMKSGRFEKVEGSDFELEADLVLLAMGfVGPe 403
Cdd:TIGR01316 311 -ARVEEIAHAEEEGVKFHFLCQPVEIIGdEEGNVRAVKfrkmdcQEQIDSGERRFLPCGDAECKLEADAVIVAIG-NGS- 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1120505585 404 KPGLLTDLGVDLNERGNVARSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYL 465
Cdd:TIGR01316 388 NPIMAETTRLKTSERGTIVVDEDQRTSIPGVFAGGDIILGAATVIRAMGQGKRAAKSINEYL 449
|
|
| PRK12809 |
PRK12809 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
30-458 |
3.52e-72 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183762 [Multi-domain] Cd Length: 639 Bit Score: 240.70 E-value: 3.52e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 30 EVYEEFSSDTLKTQASRCMDCG-IPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPAP--CEASC 106
Cdd:PRK12809 193 EIYCGLDPQQATYESDRCVYCAeKANCNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDrlCEGAC 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 107 VLGINQDPVTIKQVEVELIDRAFDEGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYG 186
Cdd:PRK12809 273 TLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFG 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 187 IPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLpIAN 266
Cdd:PRK12809 353 IPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFL-TAH 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 267 RVQLGDLEE----PTITAEGKKVVIIGGGDTGADCLGTSHRQGAESV----HQFEImpRPPETRAEhtpwptyplmyrVA 338
Cdd:PRK12809 432 TRQLMGLPEseeyPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVtcayRRDEV--SMPGSRKE------------VV 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 339 SAHEEGGERLFSVNTERFV-GADGKVTALKAHEVEMKSG------RFEKVEGSDFELEADLVLLAMGFVGPEKPgLLTDL 411
Cdd:PRK12809 498 NAREEGVEFQFNVQPQYIAcDEDGRLTAVGLIRTAMGEPgpdgrrRPRPVAGSEFELPADVLIMAFGFQAHAMP-WLQGS 576
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1120505585 412 GVDLNERGNVARSAK----WATNVDGVFVAGDMGRGQSLIVWAIAEGRSAA 458
Cdd:PRK12809 577 GIKLDKWGLIQTGDVgylpTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAA 627
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
44-481 |
6.43e-69 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 231.93 E-value: 6.43e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 44 ASRCMDCGIPfCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVE 123
Cdd:PRK12814 94 EQHCGDCLGP-CELACPAGCNIPGFIAAIARGDDREAIRIIKETIPLPGILGRICPAPCEEACRRHGVDEPVSICALKRY 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 124 LIDR--AFDEGWVKPVHPtrSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRL 201
Cdd:PRK12814 173 AADRdmESAERYIPERAP--KSGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADI 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 202 DQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLpiaNRVQLGDLEEPtitae 281
Cdd:PRK12814 251 APLRAMGAEFRFNTVFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFL---RNVALGTALHP----- 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 282 GKKVVIIGGGDTGADCLGTSHRQGAESVhqfEIMPRP-----PETRAEhtpwptyplmyrVASAHEEGGE-RLFSVNTER 355
Cdd:PRK12814 323 GKKVVVIGGGNTAIDAARTALRLGAESV---TILYRRtreemPANRAE------------IEEALAEGVSlRELAAPVSI 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 356 FVGADG-KVTALKAHEVEM-KSGRFEKV--EGSDFELEADLVLLAMG-FVGPEkpgLLTDLGVDLNERGNVA-RSAKWAT 429
Cdd:PRK12814 388 ERSEGGlELTAIKMQQGEPdESGRRRPVpvEGSEFTLQADTVISAIGqQVDPP---IAEAAGIGTSRNGTVKvDPETLQT 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1120505585 430 NVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGEsalpsPIATTTAP 481
Cdd:PRK12814 465 SVAGVFAGGDCVTGADIAINAVEQGKRAAHAIDLFLNGK-----PVTAPVQP 511
|
|
| PRK12775 |
PRK12775 |
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ... |
15-472 |
1.63e-64 |
|
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Pssm-ID: 183738 [Multi-domain] Cd Length: 1006 Bit Score: 225.21 E-value: 1.63e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 15 LPVRRPVPLR-----LLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEW-NDLVYKDrWHDGIERLHATN 88
Cdd:PRK12775 296 VPHQTPMPERdaverARNFKEVNLGYSLEDALQEAERCIQCAKPTCIAGCPVQIDIPVFiRHVVVRD-FDGALEVIYEAS 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 89 NFPEFTGRLCP--APCEASCVLGINQDPVTIKQVEVELIDRAfdegWVKPVHPTRSTGK--KVAVVGSGPAGLAAAQQLT 164
Cdd:PRK12775 375 IFPSICGRVCPqeTQCEAQCIIAKKHESVGIGRLERFVGDNA----RAKPVKPPRFSKKlgKVAICGSGPAGLAAAADLV 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 165 RAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQ--FDAVVLAGGATEA 242
Cdd:PRK12775 451 KYGVDVTVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVDIGVKIETNKVIGKTFTVPQLMNDkgFDAVFLGVGAGAP 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 243 RDLPIPGRELDGIHQAMEFLpiaNRVQL--GD----LEEPtiTAEGKKVVIIGGGDTGADCLGTSHRQGAESVhqfEIMP 316
Cdd:PRK12775 531 TFLGIPGEFAGQVYSANEFL---TRVNLmgGDkfpfLDTP--ISLGKSVVVIGAGNTAMDCLRVAKRLGAPTV---RCVY 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 317 RPPETRAEHTpwptyplMYRVASAHEEGGERLF-SVNTERFVGADGKVTALKAHEVEM----KSGRFEKVEGSDF-ELEA 390
Cdd:PRK12775 603 RRSEAEAPAR-------IEEIRHAKEEGIDFFFlHSPVEIYVDAEGSVRGMKVEEMELgepdEKGRRKPMPTGEFkDLEC 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 391 DLVLLAMG-----FVGPEKPGLltdlgvDLNERGNVA-----RSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAA 460
Cdd:PRK12775 676 DTVIYALGtkanpIITQSTPGL------ALNKWGNIAaddgkLESTQSTNLPGVFAGGDIVTGGATVILAMGAGRRAARS 749
|
490
....*....|..
gi 1120505585 461 VDAYLEGESALP 472
Cdd:PRK12775 750 IATYLRLGKKWP 761
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
11-468 |
3.29e-59 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 205.00 E-value: 3.29e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 11 TSRELPVRR------PVPLRLLDWNEVYEEFSSDTLKTQASRCMDCGIpfCHNGCPLGNLIPEWNDLVYKDRWHDGIERL 84
Cdd:PRK13984 145 NSELLDLERvemeeiPPEERVKSFIEIVKGYSKEQAMQEAARCVECGI--CTDTCPAHMDIPQYIKAIYKDDLEEGLRWL 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 85 HATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVELIDRAFDEGWVKPV-HPTRSTGKKVAVVGSGPAGLAAAQQL 163
Cdd:PRK13984 223 YKTNPLSMVCGRVCTHKCETVCSIGHRGEPIAIRWLKRYIVDNVPVEKYSEILdDEPEKKNKKVAIVGSGPAGLSAAYFL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 164 TRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVGVDITADALREQFDAVVLAGGATEAR 243
Cdd:PRK13984 303 ATMGYEVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGKDIPLEELREKHDAVFLSTGFTLGR 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 244 DLPIPGRELDGIHQAMEFLPIANRVQLGDLEEPTITaegKKVVIIGGGDTGADCLGTSHRQGAESVHQFEIMPRPPETRA 323
Cdd:PRK13984 383 STRIPGTDHPDVIQALPLLREIRDYLRGEGPKPKIP---RSLVVIGGGNVAMDIARSMARLQKMEYGEVNVKVTSLERTF 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 324 EHTPWPtyplMYRVASAHEEGGERLFSVNTERFVGADGKVTAL---KAHEVEMKSGRFEKV--EGSDFELEADLVLLAMG 398
Cdd:PRK13984 460 EEMPAD----MEEIEEGLEEGVVIYPGWGPMEVVIENDKVKGVkfkKCVEVFDEEGRFNPKfdESDQIIVEADMVVEAIG 535
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1120505585 399 fVGPEKPGLLTDLGVDLN-ERGNVARSAKWATNVDGVFVAGDMGRGQSlIVWAIAEGRSAAAAVDAYLEGE 468
Cdd:PRK13984 536 -QAPDYSYLPEELKSKLEfVRGRILTNEYGQTSIPWLFAGGDIVHGPD-IIHGVADGYWAAEGIDMYLRKQ 604
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
139-468 |
4.46e-52 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 179.80 E-value: 4.46e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNVG 218
Cdd:PRK12770 13 KPPPTGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGVVFHTRTKVC 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 219 VD---------------ITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLPIANRVQLGDLEEPTIT-AEG 282
Cdd:PRK12770 93 CGeplheeegdefveriVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRIRAAKLGYLPWEKVPpVEG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 283 KKVVIIGGGDTGADCLGTSHRQGAESVhqfEIMPRppETRAEhtpwpTYPLMYRVASAHEEGGERLFSVNTERFVGaDGK 362
Cdd:PRK12770 173 KKVVVVGAGLTAVDAALEAVLLGAEKV---YLAYR--RTINE-----APAGKYEIERLIARGVEFLELVTPVRIIG-EGR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 363 VTALKAHEVEM----KSGRF--EKVEGSDFELEADLVLLAMGFVgPEKPGLLTDLGVDLNERGNVARSAKWATNVDGVFV 436
Cdd:PRK12770 242 VEGVELAKMRLgepdESGRPrpVPIPGSEFVLEADTVVFAIGEI-PTPPFAKECLGIELNRKGEIVVDEKHMTSREGVFA 320
|
330 340 350
....*....|....*....|....*....|..
gi 1120505585 437 AGDMGRGQSLIVWAIAEGRSAAAAVDAYLEGE 468
Cdd:PRK12770 321 AGDVVTGPSKIGKAIKSGLRAAQSIHEWLDLK 352
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
58-458 |
1.29e-39 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 153.06 E-value: 1.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 58 GCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVELIDRafdEGWVKPV 137
Cdd:PRK12779 213 GCPVKIHIPEMLDLLGNGKHREALELIESCNPLPNVTGRVCPQELQCQGVCTHTKRPIEIGQLEWYLPQH---EKLVNPN 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 138 HPTRSTGK----------KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQMNSE 207
Cdd:PRK12779 290 ANERFAGRispwaaavkpPIAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 208 GTVFKTGVNVGVDITADAL-REQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLPIANRVQ--LGDLEEPTITAEGKK 284
Cdd:PRK12779 370 GGRFVKNFVVGKTATLEDLkAAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFLTRVNLMRglDDDYETPLPEVKGKE 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 285 VVIIGGGDTGADCLGTSHRQGAesvhQFEIMPRppETRAEhtpwptypLMYRVASAH---EEGGERLFSVNTERFVGaDG 361
Cdd:PRK12779 450 VFVIGGGNTAMDAARTAKRLGG----NVTIVYR--RTKSE--------MPARVEELHhalEEGINLAVLRAPREFIG-DD 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 362 K---VTALKAHEVEM----KSGRFE-KVEGSDFELEADLVLLAMG-----FVGPEKPGLLTD-LGVDLNERGNvarsakW 427
Cdd:PRK12779 515 HthfVTHALLDVNELgepdKSGRRSpKPTGEIERVPVDLVIMALGntanpIMKDAEPGLKTNkWGTIEVEKGS------Q 588
|
410 420 430
....*....|....*....|....*....|.
gi 1120505585 428 ATNVDGVFVAGDMGRGQSLIVWAIAEGRSAA 458
Cdd:PRK12779 589 RTSIKGVYSGGDAARGGSTAIRAAGDGQAAA 619
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
146-467 |
5.64e-31 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 121.38 E-value: 5.64e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERaDRIGGLLR--------YGIPEFKMEKRHIDRRLDQMNSEGTVFKTGVNV 217
Cdd:COG0492 2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLAttkeienyPGFPEGISGPELAERLREQAERFGAEILLEEVT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 218 GVD--------ITADALREQFDAVVLAGGATEaRDLPIPG-RELD--GIH-----QAMEFlpianrvqlgdleeptitaE 281
Cdd:COG0492 81 SVDkddgpfrvTTDDGTEYEAKAVIIATGAGP-RKLGLPGeEEFEgrGVSycatcDGFFF-------------------R 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 282 GKKVVIIGGGDTGAD---CLgtshRQGAESVHqfeIMPRPPETRAEHtpwptyplmYRVASAHEEGG-ERLFSVNTERFV 357
Cdd:COG0492 141 GKDVVVVGGGDSALEealYL----TKFASKVT---LIHRRDELRASK---------ILVERLRANPKiEVLWNTEVTEIE 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 358 GaDGKVTAlkaheVEMKSGRfekvEGSDFELEADLVLLAMGFVgPEKpGLLTDLGVDLNERGNVARSAKWATNVDGVFVA 437
Cdd:COG0492 205 G-DGRVEG-----VTLKNVK----TGEEKELEVDGVFVAIGLK-PNT-ELLKGLGLELDEDGYIVVDEDMETSVPGVFAA 272
|
330 340 350
....*....|....*....|....*....|..
gi 1120505585 438 GDMgRGQS--LIVWAIAEGRSAAAAVDAYLEG 467
Cdd:COG0492 273 GDV-RDYKyrQAATAAGEGAIAALSAARYLEP 303
|
|
| Fer4_20 |
pfam14691 |
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme ... |
24-133 |
5.11e-30 |
|
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyzes the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds. This domain carries two Fe4-S4 clusters.
Pssm-ID: 434132 [Multi-domain] Cd Length: 113 Bit Score: 113.02 E-value: 5.11e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 24 RLLDWNEVYEEFSSDTLKTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTGRLCPA--P 101
Cdd:pfam14691 1 RIKNFEEVALGYTEEEAIAEASRCLQCKDPPCVKGCPVHIDIPEFIKLIAEGNFEGAARIILETNPLPAICGRVCPQerQ 80
|
90 100 110
....*....|....*....|....*....|...
gi 1120505585 102 CEASCVLGI-NQDPVTIKQVEVELIDRAFDEGW 133
Cdd:pfam14691 81 CEGACVLGKkGFEPVAIGRLERFAADWARENGI 113
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
145-454 |
1.81e-26 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 108.94 E-value: 1.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRI---GGLLRYGI---PEFKMEKRHIDRRLDQMNSEGTVFKTGVNV- 217
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCpygGCVLSKALlgaAEAPEIASLWADLYKRKEEVVKKLNNGIEVl 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 218 ----GVDI-------------TADALREQFDAVVLAGGATeARDLPIPGRELDGIHqAMEFLPIANRVQLGDLEeptita 280
Cdd:pfam07992 81 lgteVVSIdpgakkvvleelvDGDGETITYDRLVIATGAR-PRLPPIPGVELNVGF-LVRTLDSAEALRLKLLP------ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 281 egKKVVIIGGGDTGADCLGTSHRQGAEsVHQFEIMPRP-PETRAEHTPWptyplmyrVASAHEEGG-ERLFSVNTERFVG 358
Cdd:pfam07992 153 --KRVVVVGGGYIGVELAAALAKLGKE-VTLIEALDRLlRAFDEEISAA--------LEKALEKNGvEVRLGTSVKEIIG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 359 ADGKVtalkahEVEMKSGRfekvegsdfELEADLVLLAMGFVGpeKPGLLTDLGVDLNERGNVARSAKWATNVDGVFVAG 438
Cdd:pfam07992 222 DGDGV------EVILKDGT---------EIDADLVVVAIGRRP--NTELLEAAGLELDERGGIVVDEYLRTSVPGIYAAG 284
|
330
....*....|....*..
gi 1120505585 439 DMGRGQ-SLIVWAIAEG 454
Cdd:pfam07992 285 DCRVGGpELAQNAVAQG 301
|
|
| PLN02852 |
PLN02852 |
ferredoxin-NADP+ reductase |
141-448 |
1.22e-20 |
|
ferredoxin-NADP+ reductase
Pssm-ID: 215457 Cd Length: 491 Bit Score: 94.38 E-value: 1.22e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 141 RSTGKKVAVVGSGPAGLAAAQQLTRA--GHMVTVFERADRIGGLLRYGI----PEFKMEKRHIDRRLDqmnSEGTVFKTG 214
Cdd:PLN02852 23 TSEPLHVCVVGSGPAGFYTADKLLKAhdGARVDIIERLPTPFGLVRSGVapdhPETKNVTNQFSRVAT---DDRVSFFGN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 215 VNVGVDITADALREQFDAVVLAGGATEARDLPIPGRELDGIHQAMEFLPIAN-----RVQLGDLeeptitAEGKKVVIIG 289
Cdd:PLN02852 100 VTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNghpdcVHLPPDL------KSSDTAVVLG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 290 GGDTGADC--------------------LGTSHRQGAESVHqfeIMPR---------PPETR--------------AEHT 326
Cdd:PLN02852 174 QGNVALDCarillrptdelastdiaehaLEALRGSSVRKVY---LVGRrgpvqaactAKELRellglknvrvrikeADLT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 327 PWP--------------TYPLMYRVASAHEEGGER-------LFSVNTERFVGADGKVTALKAHEVEMK-------SGRF 378
Cdd:PLN02852 251 LSPedeeelkasrpkrrVYELLSKAAAAGKCAPSGgqrelhfVFFRNPTRFLDSGDGNGHVAGVKLERTvlegaagSGKQ 330
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1120505585 379 EKVEGSDFE-LEADLVLLAMGFVGPEKPGLLTD--LGVDLNERGNVARSAKWATNVDGVFVAGDMGRGQSLIV 448
Cdd:PLN02852 331 VAVGTGEFEdLPCGLVLKSIGYKSLPVDGLPFDhkRGVVPNVHGRVLSSASGADTEPGLYVVGWLKRGPTGII 403
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
145-460 |
1.34e-17 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 84.42 E-value: 1.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHM--VTVF--ERA---DRIggLLRYGIPEfKMEKRHIDRRLDQMNSEGTV-FKTGVN 216
Cdd:COG1251 2 MRIVIIGAGMAGVRAAEELRKLDPDgeITVIgaEPHppyNRP--PLSKVLAG-ETDEEDLLLRPADFYEENGIdLRLGTR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 217 V-GVD------ITADALREQFDAVVLAGGATeARDLPIPGRELDGIH--------QAMEflpianrvqlgdleepTITAE 281
Cdd:COG1251 79 VtAIDraartvTLADGETLPYDKLVLATGSR-PRVPPIPGADLPGVFtlrtlddaDALR----------------AALAP 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 282 GKKVVIIGGGDTGADCLGTSHRQGAEsVHQFEIMPRP-----PETRAEhtpwptyplmyRVASAHEEGG-ERLFSVNTER 355
Cdd:COG1251 142 GKRVVVIGGGLIGLEAAAALRKRGLE-VTVVERAPRLlprqlDEEAGA-----------LLQRLLEALGvEVRLGTGVTE 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 356 FVGaDGKVTAlkaheVEMKSGRfekvegsdfELEADLVLLAMGfVGP-----EKPGLLTDLGVDLNERGnvarsakwATN 430
Cdd:COG1251 210 IEG-DDRVTG-----VRLADGE---------ELPADLVVVAIG-VRPntelaRAAGLAVDRGIVVDDYL--------RTS 265
|
330 340 350
....*....|....*....|....*....|....*....
gi 1120505585 431 VDGVFVAGD--------MGRGQSLIVW-AIAEGRSAAAA 460
Cdd:COG1251 266 DPDIYAAGDcaehpgpvYGRRVLELVApAYEQARVAAAN 304
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
147-459 |
1.88e-16 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 81.29 E-value: 1.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERaDRIGG------------LLR-------------YGI----PEFKMEK--R 195
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGGtclnvgcipskaLLHaaevahearhaaeFGIsagaPSVDWAAlmA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 196 HIDRRLDQMNS--EGTVFKTGVNV--G---------VDITADalRE-QFDAVVLAGGATeARDLPIPGRELDGIHQAMEF 261
Cdd:COG1249 85 RKDKVVDRLRGgvEELLKKNGVDVirGrarfvdphtVEVTGG--ETlTADHIVIATGSR-PRVPPIPGLDEVRVLTSDEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 262 LpianrvqlgDLEE-PtitaegKKVVIIGGGDTGADcLGTS-HRQGAEsVHQFEIMPRP-----PETRAEhtpwptypLM 334
Cdd:COG1249 162 L---------ELEElP------KSLVVIGGGYIGLE-FAQIfARLGSE-VTLVERGDRLlpgedPEISEA--------LE 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 335 YRVAsahEEGGERLFSVNTERFVGADGKVTalkaheVEMKSGRFEKVEgsdfelEADLVLLAMGFVgPEKPGL-LTDLGV 413
Cdd:COG1249 217 KALE---KEGIDILTGAKVTSVEKTGDGVT------VTLEDGGGEEAV------EADKVLVATGRR-PNTDGLgLEAAGV 280
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1120505585 414 DLNERGNVARSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAA 459
Cdd:COG1249 281 ELDERGGIKVDEYLRTSVPGIYAIGDVTGGPQLAHVASAEGRVAAE 326
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
170-439 |
1.11e-14 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 74.85 E-value: 1.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 170 VTVFERADRIGGLlRYGIP------EFKMEKRHIdRRLDQMNSEGTVFKTGVNV-GVD------ITADALREQFDAVVLA 236
Cdd:COG0446 8 ITVIEKGPHHSYQ-PCGLPyyvgggIKDPEDLLV-RTPESFERKGIDVRTGTEVtAIDpeaktvTLRDGETLSYDKLVLA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 237 GGATEARdLPIPGRELDGIHqAMEFLPIANRvqlgdLEEPTITAEGKKVVIIGGGDTG---ADCLgtsHRQGAEsVHQFE 313
Cdd:COG0446 86 TGARPRP-PPIPGLDLPGVF-TLRTLDDADA-----LREALKEFKGKRAVVIGGGPIGlelAEAL---RKRGLK-VTLVE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 314 IMPRPPetraehtPWPTYPLMYRVASAHEEGG-ERLFSVNTERFVGaDGKVTalkaheVEMKSGRfekvegsdfELEADL 392
Cdd:COG0446 155 RAPRLL-------GVLDPEMAALLEEELREHGvELRLGETVVAIDG-DDKVA------VTLTDGE---------EIPADL 211
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1120505585 393 VLLAMGfVGPEkPGLLTDLGVDLNERGNVARSAKWATNVDGVFVAGD 439
Cdd:COG0446 212 VVVAPG-VRPN-TELAKDAGLALGERGWIKVDETLQTSDPDVYAAGD 256
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
139-399 |
2.43e-13 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 71.43 E-value: 2.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGL--------LR-------YGIPEFKMEK--------- 194
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTwrdnrypgLRldtpshlYSLPFFPNWSddpdfptgd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 195 ------RHIDRRLD--------------QMNSEGTVFKTGVNVGVDITAdalreqfDAVVLAGGA-TEARDLPIPGRELD 253
Cdd:COG2072 81 eilaylEAYADKFGlrrpirfgtevtsaRWDEADGRWTVTTDDGETLTA-------RFVVVATGPlSRPKIPDIPGLEDF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 254 GIHQameFLPIA--NRVQLgdleeptitaEGKKVVIIGGGDTGADCLGTSHRQgAESVHQF-----EIMPRpPETRAEHT 326
Cdd:COG2072 154 AGEQ---LHSADwrNPVDL----------AGKRVLVVGTGASAVQIAPELARV-AAHVTVFqrtppWVLPR-PNYDPERG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 327 PWPTYPLMYRVASAHEEGGERLFSVNTERFVG--ADGKVT------------------ALKAHEVEMKSGRFEKVEG--- 383
Cdd:COG2072 219 RPANYLGLEAPPALNRRDARAWLRRLLRAQVKdpELGLLTpdyppgckrpllstdyyeALRRGNVELVTGGIERITEdgv 298
|
330
....*....|....*....
gi 1120505585 384 ---SDFELEADLVLLAMGF 399
Cdd:COG2072 299 vfaDGTEHEVDVIVWATGF 317
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
145-472 |
2.69e-13 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 71.32 E-value: 2.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTR---AGHMVTVFERADR--IGGLLrYGIPEFKMEKRHIDRRL-DQMNSEGTVFKTGVNVG 218
Cdd:COG1252 2 KRIVIVGGGFAGLEAARRLRKklgGDAEVTLIDPNPYhlFQPLL-PEVAAGTLSPDDIAIPLrELLRRAGVRFIQGEVTG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 219 VD------ITADALREQFDAVVLAGGATeARDLPIPGRE-----LDGIHQAMEflpIANRVQlgDLEEPTITAEGKKVVI 287
Cdd:COG1252 81 IDpeartvTLADGRTLSYDYLVIATGSV-TNFFGIPGLAehalpLKTLEDALA---LRERLL--AAFERAERRRLLTIVV 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 288 IGGGDTGADCLGTSHRQGAESVHQFEIMPRPPEtraehtpwptyplMYRVasaheEGGERLFSVNTERFVGA-------- 359
Cdd:COG1252 155 VGGGPTGVELAGELAELLRKLLRYPGIDPDKVR-------------ITLV-----EAGPRILPGLGEKLSEAaekelekr 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 360 ------DGKVTALKAHEVEMKSGRfekvegsdfELEADLVLLAMGFVGPEkpgLLTDLGVDLNERGNVA-----RSakwa 428
Cdd:COG1252 217 gvevhtGTRVTEVDADGVTLEDGE---------EIPADTVIWAAGVKAPP---LLADLGLPTDRRGRVLvdptlQV---- 280
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1120505585 429 TNVDGVFVAGDM------------GRGQSlivwAIAEGRSAAAAVDAYLEGESALP 472
Cdd:COG1252 281 PGHPNVFAIGDCaavpdpdgkpvpKTAQA----AVQQAKVLAKNIAALLRGKPLKP 332
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
146-194 |
1.52e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 69.15 E-value: 1.52e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLL-RYGIPEFKMEK 194
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAaSFEFGGLPIER 50
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
135-475 |
1.64e-12 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 69.50 E-value: 1.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 135 KPVHPTR-STGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGL---LRYGIPEFKMEKRHIDRRLDQMNSEG-- 208
Cdd:COG1148 130 EPLEPIKvPVNKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRaaqLHKTFPGLDCPQCILEPLIAEVEANPni 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 209 TVFK----TGVN--VG---VDITADALRE---QFDAVVLAGGATEARDLPIP----GReLDGIHQAMEFLPIANRvqlGD 272
Cdd:COG1148 210 TVYTgaevEEVSgyVGnftVTIKKGPREEieiEVGAIVLATGFKPYDPTKLGeygyGK-YPNVITNLELERLLAA---GK 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 273 LEEPTITAEGKKVVII---GGGDTGAD-------CLGTSHRQGAESVHQFeimprpPETRAEH------TPwPTYPLMYR 336
Cdd:COG1148 286 ILRPSDGKEPKSVAFIqcvGSRDEENGlpycsrvCCMYALKQALYLKEKN------PDADVYIfyrdirTY-GKYEEFYR 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 337 vaSAHEEGgerlfsVnteRFV---------GADGKVTaLKAHEVEMksgrfekveGSDFELEADLVLLAMGFVGPEKPGL 407
Cdd:COG1148 359 --RAREDG------V---RFIrgrvaeieeDEGGKLV-VTVEDTLL---------GEPVEIEADLVVLATGMVPSEDNEE 417
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1120505585 408 LTD-LGVDLNERGNVARS-AKWA---TNVDGVFVAGdMGRGQSLIVWAIAEGRSAAAAVDAYLEGESALPSPI 475
Cdd:COG1148 418 LAKlLKLPLDQDGFFLEAhPKLRpveTATDGIFLAG-AAHGPKDIPESIAQATAAAARAIQLLSKGELGVEPS 489
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
145-184 |
7.96e-12 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 67.16 E-value: 7.96e-12
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIR 41
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
141-181 |
4.07e-11 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 64.94 E-value: 4.07e-11
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1120505585 141 RSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:COG1231 4 RARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGG 44
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
145-198 |
1.41e-10 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 63.33 E-value: 1.41e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYgipeFKMEKRHID 198
Cdd:COG1233 4 YDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRART----FERPGFRFD 53
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
145-181 |
4.06e-10 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 61.05 E-value: 4.06e-10
10 20 30
....*....|....*....|....*....|....*..
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:COG3380 4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGG 40
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
145-184 |
1.47e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 59.90 E-value: 1.47e-09
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:PRK07208 5 KSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISR 44
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
149-181 |
2.65e-09 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 53.30 E-value: 2.65e-09
10 20 30
....*....|....*....|....*....|...
gi 1120505585 149 VVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGG 33
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
147-439 |
1.01e-08 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 57.49 E-value: 1.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFE------------------------------RADRIGglLRYGIPEF---KME 193
Cdd:PRK06292 6 VIVIGAGPAGYVAARRAAKLGKKVALIEkgplggtclnvgcipskaliaaaeafheakHAEEFG--IHADGPKIdfkKVM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 194 KR----------HIDRRLDQMNSEGTVFKTGVNVGVD-ITADALREQFDAVVLAGGAteaRDLPIPGREL---DGIhqam 259
Cdd:PRK06292 84 ARvrrerdrfvgGVVEGLEKKPKIDKIKGTARFVDPNtVEVNGERIEAKNIVIATGS---RVPPIPGVWLilgDRL---- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 260 eflpIANRvQLGDLEE-PtitaegKKVVIIGGGDTGADcLGTS-HRQGAEsVHQFEIMPR--P---PETRAEhtpwptyp 332
Cdd:PRK06292 157 ----LTSD-DAFELDKlP------KSLAVIGGGVIGLE-LGQAlSRLGVK-VTVFERGDRilPledPEVSKQ-------- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 333 lmyrvasAHEEGGERL-FSVNTerfvgadgkvtalKAHEVEMKSGRFEKV---EGSDFELEADLVLLAMGFVgPEKPGL- 407
Cdd:PRK06292 216 -------AQKILSKEFkIKLGA-------------KVTSVEKSGDEKVEElekGGKTETIEADYVLVATGRR-PNTDGLg 274
|
330 340 350
....*....|....*....|....*....|..
gi 1120505585 408 LTDLGVDLNERGNVARSAKWATNVDGVFVAGD 439
Cdd:PRK06292 275 LENTGIELDERGRPVVDEHTQTSVPGIYAAGD 306
|
|
| PTZ00188 |
PTZ00188 |
adrenodoxin reductase; Provisional |
146-264 |
1.28e-08 |
|
adrenodoxin reductase; Provisional
Pssm-ID: 240308 Cd Length: 506 Bit Score: 57.20 E-value: 1.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHM-VTVFERADRIGGLLRYGIPEFKMEKRHIDRRLDQ-MNSEGTVFKTGVNVGVDITA 223
Cdd:PTZ00188 41 KVGIIGAGPSALYCCKHLLKHERVkVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPvFLSPNYRFFGNVHVGVDLKM 120
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1120505585 224 DALREQFDAVVLAGGATEArDLPIPGRELDGIHQAMEFLPI 264
Cdd:PTZ00188 121 EELRNHYNCVIFCCGASEV-SIPIGQQDEDKAVSGGETNPR 160
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
143-181 |
1.28e-08 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 57.05 E-value: 1.28e-08
10 20 30
....*....|....*....|....*....|....*....
gi 1120505585 143 TGKKVAVVGSGPAGLAAAQQLTRAgHMVTVFERADRIGG 181
Cdd:COG2907 2 ARMRIAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
139-185 |
1.36e-08 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 56.79 E-value: 1.36e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRY 185
Cdd:PLN02172 5 QNPINSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVY 51
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
143-255 |
2.21e-08 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 55.59 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 143 TGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIggLLRYGiPEF------KMEKRHIDRRLDQMNSEgtvFKTGVN 216
Cdd:COG0446 123 KGKRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRL--LGVLD-PEMaalleeELREHGVELRLGETVVA---IDGDDK 196
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1120505585 217 VGVdITADALREQFDAVVLAGGA---TE-ARDLPIPGRELDGI 255
Cdd:COG0446 197 VAV-TLTDGEEIPADLVVVAPGVrpnTElAKDAGLALGERGWI 238
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
143-184 |
2.21e-08 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 56.40 E-value: 2.21e-08
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 143 TGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:COG3349 2 MPPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRAR 43
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
141-181 |
3.35e-08 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 56.41 E-value: 3.35e-08
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1120505585 141 RSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:PLN02976 690 SVDRKKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGG 730
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
155-184 |
2.71e-07 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 52.88 E-value: 2.71e-07
10 20 30
....*....|....*....|....*....|
gi 1120505585 155 AGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:pfam01593 2 AGLAAARELLRAGHDVTVLEARDRVGGRIR 31
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
146-184 |
3.60e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 51.86 E-value: 3.60e-07
10 20 30
....*....|....*....|....*....|....*....
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:COG0654 5 DVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGR 43
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
147-181 |
4.40e-07 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 52.28 E-value: 4.40e-07
10 20 30
....*....|....*....|....*....|....*
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:TIGR02734 1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGG 35
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
149-443 |
6.58e-07 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 51.67 E-value: 6.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 149 VVGSGPAGLAAAQQLTRAGHMVTVFERADRIggllrYG--------IPEFKM---------------EKRHIDRRLDQMN 205
Cdd:PRK07251 8 VIGFGKAGKTLAAKLASAGKKVALVEESKAM-----YGgtcinigcIPTKTLlvaaeknlsfeqvmaTKNTVTSRLRGKN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 206 sEGTVFKTGVNV-----------GVDITADALREQFDA--VVLAGGATeARDLPIPGReLDGIH-------QAMEFLPia 265
Cdd:PRK07251 83 -YAMLAGSGVDLydaeahfvsnkVIEVQAGDEKIELTAetIVINTGAV-SNVLPIPGL-ADSKHvydstgiQSLETLP-- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 266 nrvqlgdleeptitaegKKVVIIGGGDTGADCLGTSHRQGAEsVHQFEIMPR--PpetRAEhtpwptyPLMYRVASAH-- 341
Cdd:PRK07251 158 -----------------ERLGIIGGGNIGLEFAGLYNKLGSK-VTVLDAASTilP---REE-------PSVAALAKQYme 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 342 EEGGERLFSVNTERfVGADGKVTALKAHEVEMksgRFekvegsdfeleaDLVLLAMGFVGPEKPGLLTDLGVDLNERGNV 421
Cdd:PRK07251 210 EDGITFLLNAHTTE-VKNDGDQVLVVTEDETY---RF------------DALLYATGRKPNTEPLGLENTDIELTERGAI 273
|
330 340
....*....|....*....|..
gi 1120505585 422 ARSAKWATNVDGVFVAGDMGRG 443
Cdd:PRK07251 274 KVDDYCQTSVPGVFAVGDVNGG 295
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
143-240 |
1.36e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 50.01 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 143 TGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGgllrygipeFKMEKRHIDRRLDQMNSEGTVFKTGVNV----- 217
Cdd:pfam07992 151 LPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLL---------RAFDEEISAALEKALEKNGVEVRLGTSVkeiig 221
|
90 100
....*....|....*....|....*..
gi 1120505585 218 ---GVD-ITADALREQFDAVVLAGGAT 240
Cdd:pfam07992 222 dgdGVEvILKDGTEIDADLVVVAIGRR 248
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
134-181 |
1.49e-06 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 50.79 E-value: 1.49e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1120505585 134 VKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:PLN03000 174 IKDKFPAQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGG 221
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
144-184 |
1.76e-06 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 50.40 E-value: 1.76e-06
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 144 GKKVAVVGSGPAGLAAAQQL-TRAGHMVTVFERADRIGGLLR 184
Cdd:PLN02576 12 SKDVAVVGAGVSGLAAAYALaSKHGVNVLVTEARDRVGGNIT 53
|
|
| PRK06567 |
PRK06567 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated |
58-262 |
1.81e-06 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Pssm-ID: 235832 [Multi-domain] Cd Length: 1028 Bit Score: 50.67 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 58 GCPLGNLIPEWNDLVYKDRWHDGIERLHATNNFPEFTG-RLCpAPCEASCVLGiNQDPVTIKQVEVELIDRAFD------ 130
Cdd:PRK06567 283 GCPLKQKISEMNYVKAQGFNLSALAIIVIDNPMVAATGhRIC-NDCSKACIYQ-KQDPVNIPLIESNILEETLKlpygle 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 131 -----EGWvKPVH-----PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVF--------------------------- 173
Cdd:PRK06567 361 iylllTRW-NPLNiyaplPKEPTNYNILVTGLGPAGFSLSYYLLRSGHNVTAIdglkitllpfdvhkpikfwheyknlls 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 174 ERADR-IGGLLRYGIpEFKMEKRHID--RRLDQMNSEgtvFK--TGVNVGVDITAD-ALREQFDAVVLAGGATEARDLPI 247
Cdd:PRK06567 440 ERMPRgFGGVAEYGI-TVRWDKNNLDilRLILERNNN---FKyyDGVALDFNITKEqAFDLGFDHIAFCIGAGQPKVLDI 515
|
250
....*....|....*
gi 1120505585 248 PGRELDGIHQAMEFL 262
Cdd:PRK06567 516 ENFEAKGVKTASDFL 530
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
146-241 |
3.02e-06 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 49.32 E-value: 3.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIG--------GLLRYGI---PEFKMEK------RHIDRRLDQMNSEG 208
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGsgasgrnaGLIHPGLrylEPSELARlalealDLWEELEEELGIDC 80
|
90 100 110
....*....|....*....|....*....|....
gi 1120505585 209 TVFKTGV-NVGVDITADALREQFDAVVLAGGATE 241
Cdd:pfam01266 81 GFRRCGVlVLARDEEEEALEKLLAALRRLGVPAE 114
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
146-198 |
4.53e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 44.50 E-value: 4.53e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGIPEF---KMEKRHID 198
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPEIAKIlqeKLEKNGIE 56
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
145-184 |
6.24e-06 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 48.31 E-value: 6.24e-06
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAG--HMVTVFERADRIGGLLR 184
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQ 42
|
|
| COG4716 |
COG4716 |
Myosin-crossreactive antigen (function unknown) [Function unknown]; |
131-183 |
1.17e-05 |
|
Myosin-crossreactive antigen (function unknown) [Function unknown];
Pssm-ID: 443751 Cd Length: 578 Bit Score: 47.90 E-value: 1.17e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 1120505585 131 EGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHM----VTVFERADRIGGLL 183
Cdd:COG4716 9 EAFARPRKPEGVDDKSAYLVGSGLASLAAAAFLIRDGQMpgenIHILEELDLPGGSL 65
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
149-234 |
1.92e-05 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 47.07 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 149 VVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGL-LRYG-IPefkmEK--RHIDRRLDQMNSEGTVFKTGVNvgVDITAD 224
Cdd:PRK05249 10 VIGSGPAGEGAAMQAAKLGKRVAVIERYRNVGGGcTHTGtIP----SKalREAVLRLIGFNQNPLYSSYRVK--LRITFA 83
|
90
....*....|
gi 1120505585 225 ALREQFDAVV 234
Cdd:PRK05249 84 DLLARADHVI 93
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
145-180 |
2.25e-05 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 46.81 E-value: 2.25e-05
10 20 30
....*....|....*....|....*....|....*.
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIG 180
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLG 36
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
146-189 |
2.26e-05 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 46.44 E-value: 2.26e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERAD-------RIGGLLRYGIPE 189
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRpgsgasgRNAGQLRPGLAA 54
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
153-242 |
4.17e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 45.34 E-value: 4.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 153 GPAGLAAAQQLTRAGHMVTVFERADRI------GGLLRYGIPEFKM--EKRHIDRRLDQMnseGTVFKTGVNVGVDITAD 224
Cdd:COG0644 2 GPAGSAAARRLARAGLSVLLLEKGSFPgdkicgGGLLPRALEELEPlgLDEPLERPVRGA---RFYSPGGKSVELPPGRG 78
|
90 100
....*....|....*....|..
gi 1120505585 225 A----LREQFDAvVLAGGATEA 242
Cdd:COG0644 79 GgyvvDRARFDR-WLAEQAEEA 99
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
147-181 |
4.93e-05 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 45.45 E-value: 4.93e-05
10 20 30
....*....|....*....|....*....|....*
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:PLN02268 3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGG 37
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
147-183 |
8.62e-05 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 44.91 E-value: 8.62e-05
10 20 30
....*....|....*....|....*....|....*..
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLL 183
Cdd:pfam12831 2 VVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGGML 38
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
145-238 |
9.91e-05 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 44.78 E-value: 9.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLL-----RYGIPEFkmeKRHIDRRLDQMNSEGTVFKTGVNVGV 219
Cdd:PRK06292 170 KSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEdpevsKQAQKIL---SKEFKIKLGAKVTSVEKSGDEKVEEL 246
|
90
....*....|....*....
gi 1120505585 220 DITADALREQFDAVVLAGG 238
Cdd:PRK06292 247 EKGGKTETIEADYVLVATG 265
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
145-186 |
1.54e-04 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 43.96 E-value: 1.54e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRigglLRYG 186
Cdd:PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGHEPTLIERAPE----LRTG 38
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
283-455 |
1.69e-04 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 43.99 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 283 KKVVIIGGGDTGADCLGTSHRQGAEsVHQFeimprppeTRAeHTPWPTYPLMYR---VASAHEEGGERLFSVNTERFV-G 358
Cdd:PRK06116 168 KRVAVVGAGYIAVEFAGVLNGLGSE-THLF--------VRG-DAPLRGFDPDIRetlVEEMEKKGIRLHTNAVPKAVEkN 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 359 ADGKVTalkaheVEMKSGRfekvegsdfELEADLVLLAMGFVgPEKPGL-LTDLGVDLNERGNVARSAKWATNVDGVFVA 437
Cdd:PRK06116 238 ADGSLT------LTLEDGE---------TLTVDCLIWAIGRE-PNTDGLgLENAGVKLNEKGYIIVDEYQNTNVPGIYAV 301
|
170
....*....|....*...
gi 1120505585 438 GDMGRGQSLIVWAIAEGR 455
Cdd:PRK06116 302 GDVTGRVELTPVAIAAGR 319
|
|
| carotene-cycl |
TIGR01790 |
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ... |
147-191 |
1.77e-04 |
|
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Pssm-ID: 130850 [Multi-domain] Cd Length: 388 Bit Score: 43.57 E-value: 1.77e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRYGI--PEFK 191
Cdd:TIGR01790 2 LAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGVwdDDLS 48
|
|
| PLN00093 |
PLN00093 |
geranylgeranyl diphosphate reductase; Provisional |
146-205 |
2.01e-04 |
|
geranylgeranyl diphosphate reductase; Provisional
Pssm-ID: 177713 [Multi-domain] Cd Length: 450 Bit Score: 43.59 E-value: 2.01e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFER----ADRIGGllryGIP-----EFKMEKRHIDRRLDQMN 205
Cdd:PLN00093 41 RVAVIGGGPAGACAAETLAKGGIETFLIERkldnAKPCGG----AIPlcmvgEFDLPLDIIDRKVTKMK 105
|
|
| PRK13977 |
PRK13977 |
myosin-cross-reactive antigen; Provisional |
131-181 |
2.23e-04 |
|
myosin-cross-reactive antigen; Provisional
Pssm-ID: 237575 Cd Length: 576 Bit Score: 43.66 E-value: 2.23e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1120505585 131 EGWVKPVHPTRSTGKKVAVVGSGPAGLAAAQQLTRAGHM----VTVFERADRIGG 181
Cdd:PRK13977 9 EAFARPRKPEGVDNKKAYIIGSGLASLAAAVFLIRDGQMpgenITILEELDVPGG 63
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
143-240 |
2.60e-04 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 43.21 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 143 TGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRI---------GGLLRygipefkmeKRHIDRrldqmnseGTVFKT 213
Cdd:COG1251 141 PGKRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLlprqldeeaGALLQ---------RLLEAL--------GVEVRL 203
|
90 100
....*....|....*....|....*..
gi 1120505585 214 GVNVgVDITADalrEQFDAVVLAGGAT 240
Cdd:COG1251 204 GTGV-TEIEGD---DRVTGVRLADGEE 226
|
|
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
144-185 |
3.86e-04 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 42.84 E-value: 3.86e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 144 GKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLRY 185
Cdd:pfam00743 1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRF 42
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
142-180 |
3.92e-04 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 42.72 E-value: 3.92e-04
10 20 30
....*....|....*....|....*....|....*....
gi 1120505585 142 STGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIG 180
Cdd:PRK08163 2 TKVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG 40
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
147-182 |
4.25e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.86 E-value: 4.25e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFER--ADRIGGL 182
Cdd:COG3573 8 VIVVGAGLAGLVAAAELADAGRRVLLLDQepEANLGGQ 45
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
147-461 |
4.27e-04 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 42.83 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADrIGG------------LLR-------------YGI----PEFKMEK--R 195
Cdd:PRK06416 7 VIVIGAGPGGYVAAIRAAQLGLKVAIVEKEK-LGGtclnrgcipskaLLHaaeradearhsedFGIkaenVGIDFKKvqE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 196 HIDRRLDQMNS--EGTVFKTGVN-------------VGVDITADALREQFDAVVLAGGAteaRDLPIPGRELDG--IH-- 256
Cdd:PRK06416 86 WKNGVVNRLTGgvEGLLKKNKVDiirgeaklvdpntVRVMTEDGEQTYTAKNIILATGS---RPRELPGIEIDGrvIWts 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 257 -QAM--EFLPianrvqlgdleeptitaegKKVVIIGGGDTGADcLGTSHRQ-GAEsVHQFEIMPR--PPETRAehtpwpt 330
Cdd:PRK06416 163 dEALnlDEVP-------------------KSLVVIGGGYIGVE-FASAYASlGAE-VTIVEALPRilPGEDKE------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 331 yplMYRVAsaheeggERLFS-----VNTERFV-----GADG-KVTALKAHEVEmksgrfekvegsdfELEADLVLLAMGf 399
Cdd:PRK06416 215 ---ISKLA-------ERALKkrgikIKTGAKAkkveqTDDGvTVTLEDGGKEE--------------TLEADYVLVAVG- 269
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1120505585 400 VGPEKPGL-LTDLGVDLnERGNVARSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAAAAV 461
Cdd:PRK06416 270 RRPNTENLgLEELGVKT-DRGFIEVDEQLRTNVPNIYAIGDIVGGPMLAHKASAEGIIAAEAI 331
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
147-181 |
4.73e-04 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 42.51 E-value: 4.73e-04
10 20 30
....*....|....*....|....*....|....*
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
146-179 |
6.49e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 41.98 E-value: 6.49e-04
10 20 30
....*....|....*....|....*....|....
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRI 179
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESV 35
|
|
| PRK08243 |
PRK08243 |
4-hydroxybenzoate 3-monooxygenase; Validated |
146-240 |
7.83e-04 |
|
4-hydroxybenzoate 3-monooxygenase; Validated
Pssm-ID: 236198 [Multi-domain] Cd Length: 392 Bit Score: 41.71 E-value: 7.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADR--IGGLLRYGIPEFK----MEKRHIDRRLDQmnsEGTvfktgVNVGV 219
Cdd:PRK08243 4 QVAIIGAGPAGLLLGQLLHLAGIDSVVLERRSReyVEGRIRAGVLEQGtvdlLREAGVGERMDR---EGL-----VHDGI 75
|
90 100
....*....|....*....|.
gi 1120505585 220 DITADALREQFDAVVLAGGAT 240
Cdd:PRK08243 76 ELRFDGRRHRIDLTELTGGRA 96
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
145-238 |
8.74e-04 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 41.66 E-value: 8.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIggLLRYGIPEFKMEKRHidrrldqMNSEGTVFKTGVNVG------ 218
Cdd:PRK07251 158 ERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTI--LPREEPSVAALAKQY-------MEEDGITFLLNAHTTevkndg 228
|
90 100
....*....|....*....|..
gi 1120505585 219 --VDITADALREQFDAVVLAGG 238
Cdd:PRK07251 229 dqVLVVTEDETYRFDALLYATG 250
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
147-184 |
1.05e-03 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 41.43 E-value: 1.05e-03
10 20 30
....*....|....*....|....*....|....*...
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:PRK06183 13 VVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPR 50
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
147-181 |
1.15e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 41.12 E-value: 1.15e-03
10 20 30
....*....|....*....|....*....|....*
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
135-181 |
1.18e-03 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 41.32 E-value: 1.18e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1120505585 135 KPVHPtRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:PLN02487 67 EPEAY-KGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGG 112
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
139-180 |
1.19e-03 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 41.37 E-value: 1.19e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIG 180
Cdd:PRK01747 255 PGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEADEAPA 296
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
145-474 |
1.24e-03 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 41.06 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAA-----QQLTRAGHMVT-----VFERADRIGGLL-------RYGIPEFKMEKRHIDRRLDQmnse 207
Cdd:PRK09754 4 KTIIIVGGGQAAAMAAaslrqQGFTGELHLFSderhlPYERPPLSKSMLledspqlQQVLPANWWQENNVHLHSGV---- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 208 gTVFKTGVNVGVDITADALREQFDAVVLAGGAtEARDLPIpgreLDGIHQAMEFLPIANRVQlgDLEEptITAEGKKVVI 287
Cdd:PRK09754 80 -TIKTLGRDTRELVLTNGESWHWDQLFIATGA-AARPLPL----LDALGERCFTLRHAGDAA--RLRE--VLQPERSVVI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 288 IGGGDTGADCLGTSHRQGAeSVHQFE----IMPR--PPetraehtpwptyPLMYRVASAHEEGGERLFsVNTErfvgadg 361
Cdd:PRK09754 150 VGAGTIGLELAASATQRRC-KVTVIElaatVMGRnaPP------------PVQRYLLQRHQQAGVRIL-LNNA------- 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 362 KVTALKAHEVEMKSGRFEKVEGsdfeleaDLVLLAMGFVGPEK----PGLLTDLGVDLNERGNVARSAkwatnvdgVFVA 437
Cdd:PRK09754 209 IEHVVDGEKVELTLQSGETLQA-------DVVIYGIGISANDQlareANLDTANGIVIDEACRTCDPA--------IFAG 273
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1120505585 438 GDM-------GRGQSLIVWAIAEgRSAAAAVDAYLEGESALPSP 474
Cdd:PRK09754 274 GDVaitrldnGALHRCESWENAN-NQAQIAAAAMLGLPLPLLPP 316
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
145-333 |
1.27e-03 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 41.09 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTRAGHM---VTVFERADRIGGLLRYG--------------IPEFKMEKRH----------- 196
Cdd:COG4529 6 KRIAIIGGGASGTALAIHLLRRAPEplrITLFEPRPELGRGVAYStdspehllnvpagrMSAFPDDPDHflrwlrengar 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 197 ----------IDRRL------DQMNSEGTVFKTGVNV---------------GVDI-TADALREQFDAVVLAGGATEARD 244
Cdd:COG4529 86 aapaidpdafVPRRLfgeylrERLAEALARAPAGVRLrhiraevvdlerddgGYRVtLADGETLRADAVVLATGHPPPAP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 245 LPIPGRELDGIhqameflpIANRVQLGDLEEptiTAEGKKVVIIGGGDTGADCLGTSHRQGaesvHQFEIMP-----RPP 319
Cdd:COG4529 166 PPGLAAGSPRY--------IADPWPPGALAR---IPPDARVLIIGTGLTAIDVVLSLAARG----HRGPITAlsrrgLLP 230
|
250
....*....|....
gi 1120505585 320 ETRAEHTPWPTYPL 333
Cdd:COG4529 231 RAHPPGAPLPLKFL 244
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
139-181 |
1.66e-03 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 41.03 E-value: 1.66e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGG 181
Cdd:PLN02529 155 PEEGTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGG 197
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
388-458 |
1.78e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 40.68 E-value: 1.78e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1120505585 388 LEADLVLLAMGFVgPEKPGLLTD-LGVDLNERGNVARSAKWATNVDGVFVAGDMGRGQSLIVWAIAEGRSAA 458
Cdd:PRK06327 271 LEVDKLIVSIGRV-PNTDGLGLEaVGLKLDERGFIPVDDHCRTNVPNVYAIGDVVRGPMLAHKAEEEGVAVA 341
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
140-176 |
2.20e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 40.29 E-value: 2.20e-03
10 20 30
....*....|....*....|....*....|....*..
gi 1120505585 140 TRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTVFERA 176
Cdd:PRK07236 2 THMSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERS 38
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
146-178 |
2.41e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 40.17 E-value: 2.41e-03
10 20 30
....*....|....*....|....*....|...
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADR 178
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPG 34
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
145-181 |
2.50e-03 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 40.20 E-value: 2.50e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1120505585 145 KKVAVVGSGPAGLAAAQQLTR----AGHMVTVFERADRIGG 181
Cdd:TIGR00562 3 KHVVIIGGGISGLCAAYYLEKeipeLPVELTLVEASDRVGG 43
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
146-175 |
3.18e-03 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 39.62 E-value: 3.18e-03
10 20 30
....*....|....*....|....*....|
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFER 175
Cdd:pfam01494 3 DVLIVGGGPAGLMLALLLARAGVRVVLVER 32
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
147-184 |
3.18e-03 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 39.98 E-value: 3.18e-03
10 20 30
....*....|....*....|....*....|....*...
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIGGLLR 184
Cdd:PLN02328 241 VVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVK 278
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
147-176 |
4.45e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 39.15 E-value: 4.45e-03
10 20 30
....*....|....*....|....*....|
gi 1120505585 147 VAVVGSGPAGLAAAQQLTRAGHMVTVFERA 176
Cdd:PRK09126 6 IVVVGAGPAGLSFARSLAGSGLKVTLIERQ 35
|
|
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
139-172 |
4.56e-03 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 39.31 E-value: 4.56e-03
10 20 30
....*....|....*....|....*....|....
gi 1120505585 139 PTRSTGKKVAVVGSGPAGLAAAQQLTRAGHMVTV 172
Cdd:PLN02463 23 PSKSRVVDLVVVGGGPAGLAVAQQVSEAGLSVCC 56
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
146-180 |
4.67e-03 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 39.47 E-value: 4.67e-03
10 20 30
....*....|....*....|....*....|....*
gi 1120505585 146 KVAVVGSGPAGLAAAQQLTRAGHMVTVFERADRIG 180
Cdd:PRK08132 25 PVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLS 59
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
148-238 |
8.12e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 38.64 E-value: 8.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1120505585 148 AVVGSGPAGLAAAQQLTRAGHMVTVFERADRIggllrygIPEF----------KMEKRHIDRRLDQMNSEGTVFKTGVNV 217
Cdd:PRK06370 175 VIIGGGYIGLEFAQMFRRFGSEVTVIERGPRL-------LPREdedvaaavreILEREGIDVRLNAECIRVERDGDGIAV 247
|
90 100
....*....|....*....|.
gi 1120505585 218 GVDITADALREQFDAVVLAGG 238
Cdd:PRK06370 248 GLDCNGGAPEITGSHILVAVG 268
|
|
| |
