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Conserved domains on  [gi|1103528665|gb|APD14834|]
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ATP synthase F0 subunit 6 (mitochondrion) [Acrida cinerea]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.84e-102

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 294.38  E-value: 5.84e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKsFNGMTFLFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  81 MMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1103528665 161 RLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.84e-102

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 294.38  E-value: 5.84e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKsFNGMTFLFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  81 MMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1103528665 161 RLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 2.86e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 2.86e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   5 LFSTFDPST-NIFNLSLNWTSTFLGM----MLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKSFNgMTFLFISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLliflISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  80 MMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528665 160 VRLAANMIAGHLLLTLMGNTGSSL-SMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 6.16e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.46  E-value: 6.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  67 FNGMTFLFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528665 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
58-222 4.56e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.56  E-value: 4.56e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  58 FKTLLGPKSFNGMTFLFISIFIMMMFNNFLGLF---PYIFTSTSHLVLTFTIALPLWMSFMLFG-WINNTNHMFSHLVPQ 133
Cdd:pfam00119  45 VKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVP 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 134 GTPPALMPFMVMIETISNIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLII---GQMLLLILESAVTIIQS 210
Cdd:pfam00119 125 PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQA 204

                         170
                  ....*....|..
gi 1103528665 211 YVFSILSTLYSS 222
Cdd:pfam00119 205 YVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 1.51e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 85.51  E-value: 1.51e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  73 LFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFG-WINNTNHMFSHLVPQGTPPaLMPFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1103528665 152 IIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISmlIIGQMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 5.84e-102

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 294.38  E-value: 5.84e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNiFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKsFNGMTFLFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  81 MMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1103528665 161 RLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 3.65e-52

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 168.29  E-value: 3.65e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDP--STNIFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNlTLHKEFKTLLGPKSFNGMTFLFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  79 IMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 159 AVRLAANMIAGHLLLTLMGNTGSS-LSMNLISMLIIG--QMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGlLPVSPLIGFLLLivQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 2.86e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 2.86e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   5 LFSTFDPST-NIFNLSLNWTSTFLGM----MLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKSFNgMTFLFISIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLliflISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  80 MMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528665 160 VRLAANMIAGHLLLTLMGNTGSSL-SMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 1.50e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 146.03  E-value: 1.50e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNIFNLSLN----WTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGpKSFNGMTFLFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  77 IFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 157 TLAVRLAANMIAGHLLLTLMGNTGSSL---SMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 67-222 6.16e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 139.46  E-value: 6.16e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  67 FNGMTFLFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMI 146
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528665 147 ETISNIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLYSS 222
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.59e-41

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 140.88  E-value: 1.59e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   3 TNLFSTFDPSTnIFNLSLNWTSTFLGM---MLIPSMYWLtSSRINIMWNKLNLTLHKEFKTLLGPKSfNGMTFLFISIFI 79
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNT-APWAGLLTTVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  80 MMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLA 159
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1103528665 160 VRLAANMIAGHLLLTLMGNTGSSLSMNLI--SMLIIGQMLLLILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00035  162 LRLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 1.51e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 138.46  E-value: 1.51e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNIFNL--SLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGpKSFNGMTFLFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  79 IMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1103528665 159 AVRLAANMIAGHLLLTLMGNTGSSLSMNLISM----LIIGQMLLLILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVVslllVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 8.19e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 120.70  E-value: 8.19e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTNIFnlslnwTSTFLGMMLIPSMYWLTSS---RINIMWNKLNLTLHKEFKTLLGPKSFNGM--TFLFI 75
Cdd:MTH00120    1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  76 SIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRP 155
Cdd:MTH00120   75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1103528665 156 GTLAVRLAANMIAGHLLLTLMGNTGSSL--SMNLISMLIIGQMLLL-ILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00120  155 LALGVRLTANLTAGHLLIQLISTATLNLlpTMPTLSLLTLIILLLLtILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 7.81e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 118.13  E-value: 7.81e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDpSTNIFNLSLNWTSTFLGMMLIPSMY--WLTSSRINIMWNKLNlTLHKEFKTLLGPKSFNGMtFLFISIF 78
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTnrWLNNRLSTLQSWFFG-SFTFQLMQPINKKGHKWA-VLFLSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  79 IMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTL 158
Cdd:MTH00179   78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1103528665 159 AVRLAANMIAGHLLLTLMGNTGSSLS--MNLISMLI-IGQMLLLILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00179  158 GVRLTANITAGHLLMHLISSAVFVLMnfMGMVALLTlLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 2.69e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 116.90  E-value: 2.69e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  73 LFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNI 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1103528665 153 IRPGTLAVRLAANMIAGHLLLTLMGNTGSSL--SMNLISMLIIGQMLLL-ILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlpLMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 3.90e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 113.89  E-value: 3.90e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKSfNGMTFLFISIFIM 80
Cdd:MTH00101    1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKG-QTWSLMLMSLILF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  81 MMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLAV 160
Cdd:MTH00101   79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1103528665 161 RLAANMIAGHLLLTLMGNTG---SSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:MTH00101  159 RLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 1.48e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 109.67  E-value: 1.48e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665   1 MMTNLFSTFDPSTnIFNLSLNWTSTFLGMMLI--PSMYWLTSSRINI-MWNKLNLTlhkefKTLLGPKSFNGM--TFLFI 75
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWLNNRLSTLqIWFLQNFT-----KQLMLPLNTPGHkwALILT 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  76 SIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRP 155
Cdd:MTH00073   75 SLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRP 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1103528665 156 GTLAVRLAANMIAGHLLLTLMGNTGSSL--SMNLISMLIIGQMLLL-ILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00073  155 LALGVRLTANLTAGHLLIQLISTATLVLlpLMPTVSILTMIVLFLLtLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 75-220 2.41e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 102.01  E-value: 2.41e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  75 ISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIR 154
Cdd:MTH00175   87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 155 PGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGQMLLLI----LESAVTIIQSYVFSILSTLY 220
Cdd:MTH00175  167 AISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 4.36e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 100.89  E-value: 4.36e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  15 IFNLSLNWTSTFLGMMLIPSMYWLTSSRINIMWNKLNLTLHKEFKTLLGPKSFNGMTFLfISIFIMMMFNNFLGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  95 TSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETISNIIRPGTLAVRLAANMIAGHLLLT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1103528665 175 LMGNTG-----SSLSMNLISMLIIgqMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:MTH00172  176 ILAGFGfnmlcASGFLSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
58-222 4.56e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 97.56  E-value: 4.56e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  58 FKTLLGPKSFNGMTFLFISIFIMMMFNNFLGLF---PYIFTSTSHLVLTFTIALPLWMSFMLFG-WINNTNHMFSHLVPQ 133
Cdd:pfam00119  45 VKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVP 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 134 GTPPALMPFMVMIETISNIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLII---GQMLLLILESAVTIIQS 210
Cdd:pfam00119 125 PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQA 204

                         170
                  ....*....|..
gi 1103528665 211 YVFSILSTLYSS 222
Cdd:pfam00119 205 YVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-220 1.51e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 85.51  E-value: 1.51e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  73 LFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFG-WINNTNHMFSHLVPQGTPPaLMPFMVMIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1103528665 152 IIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISmlIIGQMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 58-220 8.40e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 81.91  E-value: 8.40e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  58 FKTLLGPKSFNGMTFLfISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPP 137
Cdd:MTH00174   79 LKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPL 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 138 ALMPFMVMIETISNIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSL--SMNLISMLIIGQMLLL--ILESAVTIIQSYVF 213
Cdd:MTH00174  158 ALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMinTGILIGSFVPFAILIFvtILEMAVAIIQAYVF 237


                  ....*..
gi 1103528665 214 SILSTLY 220
Cdd:MTH00174  238 TLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 3.56e-17

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 77.14  E-value: 3.56e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  73 LFISIFIMMMFNNFLGLFP-YIFTSTSHLVLTFTIALPLWMSFMLFG-WINNTNHMFSHLVPQgtppaLMPFMVMIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665 151 NIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLISMLIIGqMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 6.42e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.91  E-value: 6.42e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  75 ISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALplwMSFMLFGWINNTNH----MFSHLVpQGTPPALMPFMVMIETIS 150
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1103528665 151 NIIRPGTLAVRLAANMIAGHL-LLTLMGntgssLSMNLISMLIIGQM------LLLILESAVTIIQSYVFSILSTLY 220
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIvILSLIF-----ISFILKSYIVAVAVsvpfaiFIYLLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 3.55e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 55.67  E-value: 3.55e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  95 TSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETI-SNIIRPGTLAVRLAANMIAGH-LL 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1103528665 173 LTLMGNTGSSLSMNLISMLIIGQMLLLILESAVTIIQSYVFSILSTLY 220
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 72-223 9.33e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 50.36  E-value: 9.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  72 FLFISIFIMMMFNNFLGLFPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTnhMFSHLVPQGTPPALMPF-MVMIETIS 150
Cdd:MTH00087   53 VISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVS 130

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1103528665 151 NIIRPGTLAVRLAANMIAGHLLLTLMGNTGSSLSMNLIsmliigqmLLLILESAVTIIQSYVFSILSTLYSSE 223
Cdd:MTH00087  131 ELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSI--------LAIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 72-169 3.27e-07

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 48.73  E-value: 3.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  72 FLFISIFIMMMFnnFLGL-FPYIFTSTSHLVLTFTIALPLWMSFMLFGWINNTNHMFSHLVPQGTPPALMPFMVMIETIS 150
Cdd:MTH00050   25 YYSVVLFIVLFL--FLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETIS 102

                          90
                  ....*....|....*....
gi 1103528665 151 NIIRPGTLAVRLAANMIAG 169
Cdd:MTH00050  103 YIIRPVVLILRPFINISLG 121
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 24-220 2.87e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.50  E-value: 2.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  24 STFLGMMLIPSMYWLTS-------SRINIMWNKLNLTLHKEFKTLLgPKSFNGMTFLFISIFIMMMFNNFLGLFPYIFTS 96
Cdd:PRK13420   22 TTWGIMIVLVLASWLTTrrlsldpGRFQVALEGVVSTIEDAIKEVL-PRHARLVLPFVGTLWIFILVANLIGLIPGFHSP 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1103528665  97 TSHLVLTFTIALPLWMSFMLFGWINN--TNHMFSHLVPQgtpPALMPFMVmietISNIIRPGTLAVRLAANMiaghlllt 174
Cdd:PRK13420  101 TADLSVTAALALLVFFSVHWFGIRAEglREYLKHYLSPS---PFLLPFHL----ISEITRTLALAVRLFGNI-------- 165

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1103528665 175 lmgntgSSLSMNLISMLIIGQML----LLILESAVTIIQSYVFSILSTLY 220
Cdd:PRK13420  166 ------MSLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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