|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
60-242 |
5.06e-35 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 132.75 E-value: 5.06e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 60 GGFPHLQLLDVSGNsltalgPELLTLSGLRTLLARNNRLGgpgSLPKGLAQsplCRSLQVLNLSGNCFQELPASLLELRA 139
Cdd:COG4886 93 GDLTNLTELDLSGN------EELSNLTNLESLDLSGNQLT---DLPEELAN---LTNLKELDLSNNQLTDLPEPLGNLTN 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 140 LQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLL 219
Cdd:COG4886 161 LKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQL 240
|
170 180
....*....|....*....|...
gi 110347495 220 TYLPrEILNLIHLEELSLRGNPL 242
Cdd:COG4886 241 TDLP-ELGNLTNLEELDLSNNQL 262
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
48-290 |
1.54e-33 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 128.90 E-value: 1.54e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 48 YNRLTSLPRALGGgFPHLQLLDVSGNSLTALGPELLTLSGLRTLLARNNRLGgpgSLPKGLAQsplCRSLQVLNLSGNCF 127
Cdd:COG4886 122 GNQLTDLPEELAN-LTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLT---DLPEELGN---LTNLKELDLSNNQI 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 128 QELPASLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPpELANLPSLNYLVLCDNKIQSVPPqLSQLH 207
Cdd:COG4886 195 TDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLP-ELGNLTNLEELDLSNNQLTDLPP-LANLT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 208 SLRSLSLHNNLLTylpreILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRSISYTPYDLPGNLLRYLGS 287
Cdd:COG4886 273 NLKTLDLSNNQLT-----DLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLL 347
|
...
gi 110347495 288 ASN 290
Cdd:COG4886 348 ALL 350
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
120-242 |
1.43e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 89.22 E-value: 1.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 120 LNLSGNCFQELPASLLELRALQTLSLGGNQlqsipaEIENLRSLECLYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSV 199
Cdd:COG4886 78 SLLLLSLLLLGLTDLGDLTNLTELDLSGNE------ELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDL 151
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 110347495 200 PPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPL 242
Cdd:COG4886 152 PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQI 194
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
61-242 |
6.40e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 88.37 E-value: 6.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 61 GFPHLQLLDVSGNSLTALGPE--LLTLSGLRTLLARNNRLGGP---GSLP--------------KGLAQSPLCRSLQVLN 121
Cdd:PLN00113 91 RLPYIQTINLSNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTGSiprGSIPnletldlsnnmlsgEIPNDIGSFSSLKVLD 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 122 LSGNCFQ-ELPASLLELRALQTLSLGGNQLQ-SIPAEIENLRSLECLYLG-GNFIKEIPPELANLPSLNYLVLC-DNKIQ 197
Cdd:PLN00113 171 LGGNVLVgKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYLGyNNLSGEIPYEIGGLTSLNHLDLVyNNLTG 250
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 110347495 198 SVPPQLSQLHSLRSLSLHNNLLT-YLPREILNLIHLEELSLRGNPL 242
Cdd:PLN00113 251 PIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDNSL 296
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
62-242 |
2.31e-16 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 80.66 E-value: 2.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 62 FPHLQLLDVSGNSLTA-LGPELLTLSGLRTLLARNNRLGGPgsLPKGLaqSPLCRSLQVLNLSGNCFQ-ELPASLLELra 139
Cdd:PLN00113 68 SSRVVSIDLSGKNISGkISSAIFRLPYIQTINLSNNQLSGP--IPDDI--FTTSSSLRYLNLSNNNFTgSIPRGSIPN-- 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 140 LQTLSLGGNQLQ-SIPAEIENLRSLECLYLGGNFIK-EIPPELANLPSLNYLVLCDNK-IQSVPPQLSQLHSLRSLSL-H 215
Cdd:PLN00113 142 LETLDLSNNMLSgEIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASNQlVGQIPRELGQMKSLKWIYLgY 221
|
170 180
....*....|....*....|....*..
gi 110347495 216 NNLLTYLPREILNLIHLEELSLRGNPL 242
Cdd:PLN00113 222 NNLSGEIPYEIGGLTSLNHLDLVYNNL 248
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
113-242 |
4.30e-13 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 67.89 E-value: 4.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 113 LCRSLQVLNLSGNCFQELPaSLLELRALQTLSLGGNQLQSIPaEIENLRSLECLYLGGNFIKEI---------------- 176
Cdd:cd21340 22 LCKNLKVLYLYDNKITKIE-NLEFLTNLTHLYLQNNQIEKIE-NLENLVNLKKLYLGGNRISVVeglenltnleelhien 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 177 ---PPE---------LANL-PSLNYLVLCDNKIQSVPPqLSQLHSLRSLSLHNNLLTYLpREILNLI----HLEELSLRG 239
Cdd:cd21340 100 qrlPPGekltfdprsLAALsNSLRVLNISGNNIDSLEP-LAPLRNLEQLDASNNQISDL-EELLDLLsswpSLRELDLTG 177
|
...
gi 110347495 240 NPL 242
Cdd:cd21340 178 NPV 180
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
49-290 |
1.77e-12 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 68.57 E-value: 1.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 49 NRLTSLPRALGGgfpHLQLLDVSGNSLTALgPELLTLSGLRTLLARNNRLGGPGSLPKglaqsplcrSLQVLNLSGNCFQ 128
Cdd:PRK15370 209 NELKSLPENLQG---NIKTLYANSNQLTSI-PATLPDTIQEMELSINRITELPERLPS---------ALQSLDLFHNKIS 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 129 ELPASLLElrALQTLSLGGNQLQSIPAEIENlrSLECLYLGGNFIKEIPPELAnlPSLNYLVLCDNKIQSVPPQLSQlhS 208
Cdd:PRK15370 276 CLPENLPE--ELRYLSVYDNSIRTLPAHLPS--GITHLNVQSNSLTALPETLP--PGLKTLEAGENALTSLPASLPP--E 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 209 LRSLSLHNNLLTYLPREIlnlihleelslrgnplvvrfvrdltydPPTLLELaarTIKIRSISYTPYDLPGnLLRYLGSA 288
Cdd:PRK15370 348 LQVLDVSKNQITVLPETL---------------------------PPTITTL---DVSRNALTNLPENLPA-ALQIMQAS 396
|
..
gi 110347495 289 SN 290
Cdd:PRK15370 397 RN 398
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
49-254 |
2.93e-12 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 67.88 E-value: 2.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 49 NRLTSLPRALgggfPHLQLLDVSGNSLTALgPELLtlSGLRTLLARNNRLGGPGSLPKGLaqsplcrslQVLNLSGNCFQ 128
Cdd:PRK15387 292 NQLTSLPVLP----PGLQELSVSDNQLASL-PALP--SELCKLWAYNNQLTSLPTLPSGL---------QELSVSDNQLA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 129 ELPASLLELRALQTLSlggNQLQSIPAEIENLRSLeclYLGGNFIKEIPPelanLPS-LNYLVLCDNKIQSVPPQLSqlh 207
Cdd:PRK15387 356 SLPTLPSELYKLWAYN---NRLTSLPALPSGLKEL---IVSGNRLTSLPV----LPSeLKELMVSGNRLTSLPMLPS--- 422
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 110347495 208 SLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPL---VVRFVRDLTYDP 254
Cdd:PRK15387 423 GLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLserTLQALREITSAP 472
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
48-267 |
3.80e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 63.80 E-value: 3.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 48 YNRLTSLPRALGGgFPHLQLLDVSGNSLTALGPELLTLSGLRTLLARNNRLGgpgSLPkGLAQSPlcrSLQVLNLSGNCF 127
Cdd:COG4886 191 NNQITDLPEPLGN-LTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLT---DLP-ELGNLT---NLEELDLSNNQL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 128 QELPaSLLELRALQTLSLGGNQLQSIpaEIENLRSLECLYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQLH 207
Cdd:COG4886 263 TDLP-PLANLTNLKTLDLSNNQLTDL--KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTT 339
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 208 SLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKI 267
Cdd:COG4886 340 LALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAG 399
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
48-208 |
1.01e-10 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 63.18 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 48 YNRLTSLPRALGGGfphLQLLDVSGNSLTALgPELLTlSGLRTLLARNNRLGG-PGSLPKGlaqsplcrsLQVLNLSGNC 126
Cdd:PRK15370 271 HNKISCLPENLPEE---LRYLSVYDNSIRTL-PAHLP-SGITHLNVQSNSLTAlPETLPPG---------LKTLEAGENA 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 127 FQELPASLLElrALQTLSLGGNQLQSIPAEIENlrSLECLYLGGNFIKEIPpelANLP-SLNYLVLCDNKIQSVPPQLSQ 205
Cdd:PRK15370 337 LTSLPASLPP--ELQVLDVSKNQITVLPETLPP--TITTLDVSRNALTNLP---ENLPaALQIMQASRNNLVRLPESLPH 409
|
...
gi 110347495 206 LHS 208
Cdd:PRK15370 410 FRG 412
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
51-242 |
4.35e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 61.40 E-value: 4.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 51 LTSLPR---------ALGGGFP-------HLQLLDVSGNSLTALGPELLTLSG-LRTLLARNNRLggPGSLPKGLAQspl 113
Cdd:PLN00113 328 LTSLPRlqvlqlwsnKFSGEIPknlgkhnNLTVLDLSTNNLTGEIPEGLCSSGnLFKLILFSNSL--EGEIPKSLGA--- 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 114 CRSLQVLNLSGNCFQ-ELPASLLELRALQTLSLGGNQLQ-SIPAEIENLRSLECLYLGGN-------------------- 171
Cdd:PLN00113 403 CRSLRRVRLQDNSFSgELPSEFTKLPLVYFLDISNNNLQgRINSRKWDMPSLQMLSLARNkffgglpdsfgskrlenldl 482
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 110347495 172 ----FIKEIPPELANLPSLNYLVLCDNKIQSV-PPQLSQLHSLRSLSL-HNNLLTYLPREILNLIHLEELSLRGNPL 242
Cdd:PLN00113 483 srnqFSGAVPRKLGSLSELMQLKLSENKLSGEiPDELSSCKKLVSLDLsHNQLSGQIPASFSEMPVLSQLDLSQNQL 559
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
68-237 |
3.06e-08 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 55.65 E-value: 3.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 68 LDVSGNSLTALGPELLTLSGLRTLLARnnrlggpGSlpKGLAQSP---LCRSLQVLNLSgNC--FQELPASLLELRALQT 142
Cdd:PLN03210 616 LQMQGSKLEKLWDGVHSLTGLRNIDLR-------GS--KNLKEIPdlsMATNLETLKLS-DCssLVELPSSIQYLNKLED 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 143 LSLGG-NQLQSIPAEIeNLRSLECL---------------------YLGGNFIKEIPPELaNLPSLNYLVLCDNK----- 195
Cdd:PLN03210 686 LDMSRcENLEILPTGI-NLKSLYRLnlsgcsrlksfpdistniswlDLDETAIEEFPSNL-RLENLDELILCEMKseklw 763
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 110347495 196 --IQSVPPQLSQL-HSLRSLSLHNN-LLTYLPREILNLIHLEELSL 237
Cdd:PLN03210 764 erVQPLTPLMTMLsPSLTRLFLSDIpSLVELPSSIQNLHKLEHLEI 809
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
153-220 |
4.37e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 54.82 E-value: 4.37e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 153 IPAEIENLRSLECLYLGGNFIK-EIPPELANLPSLNYLVLCDNKIQ-SVPPQLSQLHSLRSLSLHNNLLT 220
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLS 503
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
48-242 |
5.31e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 54.85 E-value: 5.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 48 YNRLT-SLPRALGGgFPHLQLLDVSGNSLTA-LGPELLTLSGLRTLLARNNRLGGPgslpkglaqsplcrslqvlnlsgn 125
Cdd:PLN00113 221 YNNLSgEIPYEIGG-LTSLNHLDLVYNNLTGpIPSSLGNLKNLQYLFLYQNKLSGP------------------------ 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 126 cfqeLPASLLELRALQTLSLGGNQLQ-SIPAEIENLRSLECLYL-GGNFIKEIPPELANLPSLNYLVLCDNKIQ-SVPPQ 202
Cdd:PLN00113 276 ----IPPSIFSLQKLISLDLSDNSLSgEIPELVIQLQNLEILHLfSNNFTGKIPVALTSLPRLQVLQLWSNKFSgEIPKN 351
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 110347495 203 LSQLHSLRSLSLHNNLLT-YLPREILNLIHLEELSLRGNPL 242
Cdd:PLN00113 352 LGKHNNLTVLDLSTNNLTgEIPEGLCSSGNLFKLILFSNSL 392
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
161-219 |
1.18e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 1.18e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 110347495 161 RSLECLYLGGNFIKEIPPE-LANLPSLNYLVLCDNKIQSVPPQ-LSQLHSLRSLSLHNNLL 219
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
184-242 |
2.29e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.13 E-value: 2.29e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 110347495 184 PSLNYLVLCDNKIQSVPPQ-LSQLHSLRSLSLHNNLLTYL-PREILNLIHLEELSLRGNPL 242
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
115-184 |
4.01e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 48.66 E-value: 4.01e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 110347495 115 RSLQVLNLSGNCFQ-ELPASLLELRALQTLSLGGNQLQ-SIPAEIENLRSLECLYLGGNFIK-EIPPELANLP 184
Cdd:PLN03150 442 RHLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSgRVPAALGGRL 514
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
138-196 |
2.40e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.74 E-value: 2.40e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 110347495 138 RALQTLSLGGNQLQSIPAEI-ENLRSLECLYLGGNFIKEIPPE-LANLPSLNYLVLCDNKI 196
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
64-134 |
6.75e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.81 E-value: 6.75e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 110347495 64 HLQLLDVSGNSLT-ALGPELLTLSGLRTLLARNNRLGgpGSLPKGLAQsplCRSLQVLNLSGNCFQ-ELPASL 134
Cdd:PLN03150 443 HLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFN--GSIPESLGQ---LTSLRILNLNGNSLSgRVPAAL 510
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
115-171 |
1.65e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 1.65e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 110347495 115 RSLQVLNLSGNCFQELPASLLE-LRALQTLSLGGNQLQSI-PAEIENLRSLECLYLGGN 171
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKgLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
54-206 |
3.06e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 42.34 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 54 LPRALGGGFPHLQLLDVSGNSLT-----ALGPELLTLSGLRTLLARNNRLGGPG--SLPKGLAQSPlcrSLQVLNLSGNC 126
Cdd:cd00116 128 LAKGLKDLPPALEKLVLGRNRLEgasceALAKALRANRDLKELNLANNGIGDAGirALAEGLKANC---NLEVLDLNNNG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 127 FQELPASLLE-----LRALQTLSLGGNQLQSI------PAEIENLRSLECLYLGGNFIKEIPPE-----LANLPSLNYLV 190
Cdd:cd00116 205 LTDEGASALAetlasLKSLEVLNLGDNNLTDAgaaalaSALLSPNISLLTLSLSCNDITDDGAKdlaevLAEKESLLELD 284
|
170
....*....|....*.
gi 110347495 191 LCDNKIQSVPPQLSQL 206
Cdd:cd00116 285 LRGNKFGEEGAQLLAE 300
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
48-98 |
3.62e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.27 E-value: 3.62e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 110347495 48 YNRLTSLPRALGGGFPHLQLLDVSGNSLTALGPELLT-LSGLRTLLARNNRL 98
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSgLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
60-163 |
1.36e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.60 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 60 GGFP------HLQLLDVSGNSLTALGPE-LLTLSGLRTLLARNNRLGGpgSLPKGLAQsplCRSLQVLNLSGNCFQ-ELP 131
Cdd:PLN00113 466 GGLPdsfgskRLENLDLSRNQFSGAVPRkLGSLSELMQLKLSENKLSG--EIPDELSS---CKKLVSLDLSHNQLSgQIP 540
|
90 100 110
....*....|....*....|....*....|...
gi 110347495 132 ASLLELRALQTLSLGGNQLQ-SIPAEIENLRSL 163
Cdd:PLN00113 541 ASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESL 573
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
63-150 |
1.38e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 63 PHLQLLDVSGNSLTALGPEllTLSGLrtllarnnrlggpgslpkglaqsplcRSLQVLNLSGNCFQEL-PASLLELRALQ 141
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDG--AFKGL--------------------------SNLKVLDLSNNLLTTLsPGAFSGLPSLR 52
|
....*....
gi 110347495 142 TLSLGGNQL 150
Cdd:pfam13855 53 YLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
49-217 |
1.84e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 40.16 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 49 NRLTSLPRALGGGFPHLQLLDVSGNSLTALG-PELLTLSGLRTLLARNNRLGGPG--SLPKGLAQSPLCRSLQvlnLSGN 125
Cdd:COG5238 142 NLIQVLKDPLGGNAVHLLGLAARLGLLAAISmAKALQNNSVETVYLGCNQIGDEGieELAEALTQNTTVTTLW---LKRN 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110347495 126 CFQELPAS-----LLELRALQTLSLGGNQL--QSIPAEIENL---RSLECLYLGGNFIKE-----IPPELANLPSLNYLV 190
Cdd:COG5238 219 PIGDEGAEilaeaLKGNKSLTTLDLSNNQIgdEGVIALAEALknnTTVETLYLSGNQIGAegaiaLAKALQGNTTLTSLD 298
|
170 180 190
....*....|....*....|....*....|..
gi 110347495 191 LCDNKI-----QSVPPQLSQLHSLRSLSLHNN 217
Cdd:COG5238 299 LSVNRIgdegaIALAEGLQGNKTLHTLNLAYN 330
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
184-217 |
9.73e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 33.76 E-value: 9.73e-03
10 20 30
....*....|....*....|....*....|....
gi 110347495 184 PSLNYLVLCDNKIQSVPPqLSQLHSLRSLSLHNN 217
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPP-LAKLPNLETLDLSGN 33
|
|
|