|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10416 |
PRK10416 |
signal recognition particle-docking protein FtsY; Provisional |
3-328 |
2.05e-173 |
|
signal recognition particle-docking protein FtsY; Provisional
Pssm-ID: 236686 [Multi-domain] Cd Length: 318 Bit Score: 483.45 E-value: 2.05e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 3 FFDKIKRAFTGEEKTeeveVQEKYDKGLEKTRKTFGERMNELFAnFRTVDEDFFEELEETLIGADVGFETAIRITEALRQ 82
Cdd:PRK10416 1 FFSWLKKKKKEKKEG----WFERLKKGLSKTRENFGEGINGLFA-KKKIDEDLLEELEELLIEADVGVETTEEIIEELRE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 83 EVKLRNAKKSAEVQNAIIEKLVDLYEAEGinevNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAAD 162
Cdd:PRK10416 76 RVKRKNLKDPEELKELLKEELAEILEPVE----KPLNIEEKKPFVILVVGVNGVGKTTTIGKLAHKYKAQGKKVLLAAGD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 163 TFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPE 242
Cdd:PRK10416 152 TFRAAAIEQLQVWGERVGVPVIAQKEGADPASVAFDAIQAAKARGIDVLIIDTAGRLHNKTNLMEELKKIKRVIKKADPD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 243 APQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVV 322
Cdd:PRK10416 232 APHEVLLVLDATTGQNALSQAKAFHEAVGLTGIILTKLDGTAKGGVVFAIADELGIPIKFIGVGEGIDDLQPFDAEEFVD 311
|
....*.
gi 1090990736 323 GLFKGL 328
Cdd:PRK10416 312 ALLGGE 317
|
|
| FtsY |
COG0552 |
Signal recognition particle GTPase FtsY [Intracellular trafficking, secretion, and vesicular ... |
24-327 |
1.77e-170 |
|
Signal recognition particle GTPase FtsY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440318 [Multi-domain] Cd Length: 303 Bit Score: 475.28 E-value: 1.77e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 24 EKYDKGLEKTRKTFGERMNELFANFRTVDEDFFEELEETLIGADVGFETAIRITEALRQEVKLRNAKKSAEVQNAIIEKL 103
Cdd:COG0552 3 ERLKEGLSKTRSGLGEKLKSLFSGKKKIDEDLLEELEELLIEADVGVETTEEIIEELRERVKRKKLKDPEELKEALKEEL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 104 VDLYEAEGinevNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEV 183
Cdd:COG0552 83 LEILDPVD----KPLAIEEKKPFVILVVGVNGVGKTTTIGKLAHRLKAEGKSVLLAAGDTFRAAAIEQLEVWGERVGVPV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 184 VRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQA 263
Cdd:COG0552 159 IAQKEGADPAAVAFDAIQAAKARGADVVIIDTAGRLHNKKNLMEELKKIKRVIKKLDPDAPHEVLLVLDATTGQNALSQA 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1090990736 264 KQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGLFKG 327
Cdd:COG0552 239 KVFNEAVGVTGIVLTKLDGTAKGGVVLAIADELGIPIKFIGVGEGIDDLRPFDAEEFVDALFGE 302
|
|
| ftsY |
TIGR00064 |
signal recognition particle-docking protein FtsY; There is a weak division between FtsY and ... |
62-325 |
7.24e-127 |
|
signal recognition particle-docking protein FtsY; There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 272883 [Multi-domain] Cd Length: 277 Bit Score: 363.89 E-value: 7.24e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 62 TLIGADVGFETAIRITEALRQEVKLRNAKKSAEVQNAIIEKLVDLYEAEGINEVN-ELNIQEDGLTVILFVGVNGVGKTT 140
Cdd:TIGR00064 13 ILLESDVGYEVVEKIIEALKKELKGKKVKDAEKLKEILKEYLKEILKEDLLKNTDlELIVEENKPNVILFVGVNGVGKTT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 141 SIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQ 220
Cdd:TIGR00064 93 TIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKEGADPAAVAFDAIQKAKARNIDVVLIDTAGRLQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 221 NKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPV 300
Cdd:TIGR00064 173 NKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGIILTKLDGTAKGGIILSIAYELKLPI 252
|
250 260
....*....|....*....|....*
gi 1090990736 301 KLVGLGEGIDDLEPFDPNDFVVGLF 325
Cdd:TIGR00064 253 KFIGVGEKIDDLAPFDADWFVEALF 277
|
|
| FtsY |
cd17874 |
signal recognition particle receptor FtsY; FtsY, the bacterial signal-recognition particle ... |
126-324 |
4.55e-116 |
|
signal recognition particle receptor FtsY; FtsY, the bacterial signal-recognition particle (SRP) receptor (SR), is homologous to the SRP receptor alpha-subunit (SRalpha) of the eukaryotic SR. It interacts with the signal-recognition particle (SRP) and is required for the co-translational membrane targeting of proteins.
Pssm-ID: 349783 Cd Length: 199 Bit Score: 333.77 E-value: 4.55e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKT 205
Cdd:cd17874 1 FVILFVGVNGVGKTTTIGKLAHYLKNQGKKVVLAAGDTFRAAAVEQLEEWAERLGVPVISQNEGADPAAVAFDAIQAAKA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 EQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAK 285
Cdd:cd17874 81 RGIDVVLIDTAGRLHTKKNLMEELKKIKRVIKKKDPEAPHEVLLVLDATTGQNALEQAKEFNEAVGLTGIILTKLDGTAK 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 1090990736 286 GGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGL 324
Cdd:cd17874 161 GGIVLSIADELKIPVKFVGVGEGIDDLRPFDPEAFVEAL 199
|
|
| SRP54 |
smart00962 |
SRP54-type protein, GTPase domain; This entry represents the GTPase domain of the 54 kDa SRP54 ... |
126-326 |
3.26e-104 |
|
SRP54-type protein, GTPase domain; This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins.
Pssm-ID: 214940 Cd Length: 197 Bit Score: 303.56 E-value: 3.26e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFK-NEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAK 204
Cdd:smart00962 2 GVILLVGPNGVGKTTTIAKLAARLKlKGGKKVLLVAADTFRAAAVEQLKTYAEILGVVPVAGGEGADPVAVAKDAVELAK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 205 TEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTA 284
Cdd:smart00962 82 ARGYDVVLIDTAGRLHNDENLMEELKKIKRVIK------PDEVLLVSDATTGQDAVEQAKAFNEALGLTGIILTKLDGTA 155
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1090990736 285 KGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGLFK 326
Cdd:smart00962 156 KGGAALSIAAETGLPIKFIGTGEKVPDLEPFDPERFVSRLLG 197
|
|
| SRP54 |
pfam00448 |
SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 ... |
126-324 |
3.26e-103 |
|
SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 family of proteins.
Pssm-ID: 459814 [Multi-domain] Cd Length: 193 Bit Score: 300.61 E-value: 3.26e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKT 205
Cdd:pfam00448 1 NVILLVGLQGSGKTTTIAKLAAYLKKKGKKVLLVAADTFRAAAIEQLKQLAEKLGVPVFGSKTGADPAAVAFDAVEKAKA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 EQADVLLVDTAGRLQNKVNLMNELEKIKRVIqrelpeAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAK 285
Cdd:pfam00448 81 ENYDVVLVDTAGRLQNDKNLMDELKKIKRVV------APDEVLLVLDATTGQNAVNQAKAFNEAVGITGVILTKLDGDAK 154
|
170 180 190
....*....|....*....|....*....|....*....
gi 1090990736 286 GGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGL 324
Cdd:pfam00448 155 GGAALSIVAETGKPIKFIGVGEKIDDLEPFDPERFVSRL 193
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10416 |
PRK10416 |
signal recognition particle-docking protein FtsY; Provisional |
3-328 |
2.05e-173 |
|
signal recognition particle-docking protein FtsY; Provisional
Pssm-ID: 236686 [Multi-domain] Cd Length: 318 Bit Score: 483.45 E-value: 2.05e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 3 FFDKIKRAFTGEEKTeeveVQEKYDKGLEKTRKTFGERMNELFAnFRTVDEDFFEELEETLIGADVGFETAIRITEALRQ 82
Cdd:PRK10416 1 FFSWLKKKKKEKKEG----WFERLKKGLSKTRENFGEGINGLFA-KKKIDEDLLEELEELLIEADVGVETTEEIIEELRE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 83 EVKLRNAKKSAEVQNAIIEKLVDLYEAEGinevNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAAD 162
Cdd:PRK10416 76 RVKRKNLKDPEELKELLKEELAEILEPVE----KPLNIEEKKPFVILVVGVNGVGKTTTIGKLAHKYKAQGKKVLLAAGD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 163 TFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPE 242
Cdd:PRK10416 152 TFRAAAIEQLQVWGERVGVPVIAQKEGADPASVAFDAIQAAKARGIDVLIIDTAGRLHNKTNLMEELKKIKRVIKKADPD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 243 APQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVV 322
Cdd:PRK10416 232 APHEVLLVLDATTGQNALSQAKAFHEAVGLTGIILTKLDGTAKGGVVFAIADELGIPIKFIGVGEGIDDLQPFDAEEFVD 311
|
....*.
gi 1090990736 323 GLFKGL 328
Cdd:PRK10416 312 ALLGGE 317
|
|
| FtsY |
COG0552 |
Signal recognition particle GTPase FtsY [Intracellular trafficking, secretion, and vesicular ... |
24-327 |
1.77e-170 |
|
Signal recognition particle GTPase FtsY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440318 [Multi-domain] Cd Length: 303 Bit Score: 475.28 E-value: 1.77e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 24 EKYDKGLEKTRKTFGERMNELFANFRTVDEDFFEELEETLIGADVGFETAIRITEALRQEVKLRNAKKSAEVQNAIIEKL 103
Cdd:COG0552 3 ERLKEGLSKTRSGLGEKLKSLFSGKKKIDEDLLEELEELLIEADVGVETTEEIIEELRERVKRKKLKDPEELKEALKEEL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 104 VDLYEAEGinevNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEV 183
Cdd:COG0552 83 LEILDPVD----KPLAIEEKKPFVILVVGVNGVGKTTTIGKLAHRLKAEGKSVLLAAGDTFRAAAIEQLEVWGERVGVPV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 184 VRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQA 263
Cdd:COG0552 159 IAQKEGADPAAVAFDAIQAAKARGADVVIIDTAGRLHNKKNLMEELKKIKRVIKKLDPDAPHEVLLVLDATTGQNALSQA 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1090990736 264 KQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGLFKG 327
Cdd:COG0552 239 KVFNEAVGVTGIVLTKLDGTAKGGVVLAIADELGIPIKFIGVGEGIDDLRPFDAEEFVDALFGE 302
|
|
| ftsY |
TIGR00064 |
signal recognition particle-docking protein FtsY; There is a weak division between FtsY and ... |
62-325 |
7.24e-127 |
|
signal recognition particle-docking protein FtsY; There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 272883 [Multi-domain] Cd Length: 277 Bit Score: 363.89 E-value: 7.24e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 62 TLIGADVGFETAIRITEALRQEVKLRNAKKSAEVQNAIIEKLVDLYEAEGINEVN-ELNIQEDGLTVILFVGVNGVGKTT 140
Cdd:TIGR00064 13 ILLESDVGYEVVEKIIEALKKELKGKKVKDAEKLKEILKEYLKEILKEDLLKNTDlELIVEENKPNVILFVGVNGVGKTT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 141 SIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQ 220
Cdd:TIGR00064 93 TIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKEGADPAAVAFDAIQKAKARNIDVVLIDTAGRLQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 221 NKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPV 300
Cdd:TIGR00064 173 NKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGIILTKLDGTAKGGIILSIAYELKLPI 252
|
250 260
....*....|....*....|....*
gi 1090990736 301 KLVGLGEGIDDLEPFDPNDFVVGLF 325
Cdd:TIGR00064 253 KFIGVGEKIDDLAPFDADWFVEALF 277
|
|
| FtsY |
cd17874 |
signal recognition particle receptor FtsY; FtsY, the bacterial signal-recognition particle ... |
126-324 |
4.55e-116 |
|
signal recognition particle receptor FtsY; FtsY, the bacterial signal-recognition particle (SRP) receptor (SR), is homologous to the SRP receptor alpha-subunit (SRalpha) of the eukaryotic SR. It interacts with the signal-recognition particle (SRP) and is required for the co-translational membrane targeting of proteins.
Pssm-ID: 349783 Cd Length: 199 Bit Score: 333.77 E-value: 4.55e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKT 205
Cdd:cd17874 1 FVILFVGVNGVGKTTTIGKLAHYLKNQGKKVVLAAGDTFRAAAVEQLEEWAERLGVPVISQNEGADPAAVAFDAIQAAKA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 EQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAK 285
Cdd:cd17874 81 RGIDVVLIDTAGRLHTKKNLMEELKKIKRVIKKKDPEAPHEVLLVLDATTGQNALEQAKEFNEAVGLTGIILTKLDGTAK 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 1090990736 286 GGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGL 324
Cdd:cd17874 161 GGIVLSIADELKIPVKFVGVGEGIDDLRPFDPEAFVEAL 199
|
|
| SRP54 |
smart00962 |
SRP54-type protein, GTPase domain; This entry represents the GTPase domain of the 54 kDa SRP54 ... |
126-326 |
3.26e-104 |
|
SRP54-type protein, GTPase domain; This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins.
Pssm-ID: 214940 Cd Length: 197 Bit Score: 303.56 E-value: 3.26e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFK-NEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAK 204
Cdd:smart00962 2 GVILLVGPNGVGKTTTIAKLAARLKlKGGKKVLLVAADTFRAAAVEQLKTYAEILGVVPVAGGEGADPVAVAKDAVELAK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 205 TEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTA 284
Cdd:smart00962 82 ARGYDVVLIDTAGRLHNDENLMEELKKIKRVIK------PDEVLLVSDATTGQDAVEQAKAFNEALGLTGIILTKLDGTA 155
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1090990736 285 KGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGLFK 326
Cdd:smart00962 156 KGGAALSIAAETGLPIKFIGTGEKVPDLEPFDPERFVSRLLG 197
|
|
| SRP54 |
pfam00448 |
SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 ... |
126-324 |
3.26e-103 |
|
SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 family of proteins.
Pssm-ID: 459814 [Multi-domain] Cd Length: 193 Bit Score: 300.61 E-value: 3.26e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKT 205
Cdd:pfam00448 1 NVILLVGLQGSGKTTTIAKLAAYLKKKGKKVLLVAADTFRAAAIEQLKQLAEKLGVPVFGSKTGADPAAVAFDAVEKAKA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 EQADVLLVDTAGRLQNKVNLMNELEKIKRVIqrelpeAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAK 285
Cdd:pfam00448 81 ENYDVVLVDTAGRLQNDKNLMDELKKIKRVV------APDEVLLVLDATTGQNAVNQAKAFNEAVGITGVILTKLDGDAK 154
|
170 180 190
....*....|....*....|....*....|....*....
gi 1090990736 286 GGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFVVGL 324
Cdd:pfam00448 155 GGAALSIVAETGKPIKFIGVGEKIDDLEPFDPERFVSRL 193
|
|
| PRK14974 |
PRK14974 |
signal recognition particle-docking protein FtsY; |
4-325 |
6.89e-82 |
|
signal recognition particle-docking protein FtsY;
Pssm-ID: 237875 [Multi-domain] Cd Length: 336 Bit Score: 251.82 E-value: 6.89e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 4 FDKIKRAFTG-----EEKTEEVEVQEKYDKGLEKTRKTFGERMNELFANFRTVDEDFFEEL--------EETLIGADVGF 70
Cdd:PRK14974 2 FDKLKEKLSKfvekvEEKIEEEEEEEAPEAEEEEEEEDEEEKKEKPGFFDKAKITEIKEKDiedlleelELELLESDVAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 71 ETAIRITEALRQEVKLRNAKKSAEVQNAIIEKLVD-LYEAEGINEVNEL--NIQEDGL-TVILFVGVNGVGKTTSIGKLA 146
Cdd:PRK14974 82 EVAEEILESLKEKLVGKKVKRGEDVEEIVKNALKEaLLEVLSVGDLFDLieEIKSKGKpVVIVFVGVNGTGKTTTIAKLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 147 HQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGRLQNKVNLM 226
Cdd:PRK14974 162 YYLKKNGFSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKHKYGADPAAVAYDAIEHAKARGIDVVLIDTAGRMHTDANLM 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 227 NELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLG 306
Cdd:PRK14974 242 DELKKIVRVTK------PDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILTKVDADAKGGAALSIAYVIGKPILFLGVG 315
|
330
....*....|....*....
gi 1090990736 307 EGIDDLEPFDPNDFVVGLF 325
Cdd:PRK14974 316 QGYDDLIPFDPDWFVDKLL 334
|
|
| Ffh |
COG0541 |
Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular ... |
114-317 |
9.40e-81 |
|
Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440307 [Multi-domain] Cd Length: 423 Bit Score: 251.48 E-value: 9.40e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 114 EVNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPA 193
Cdd:COG0541 89 ENEELNLAKKPPTVIMMVGLQGSGKTTTAAKLAKYLKKKGKKPLLVAADVYRPAAIEQLKTLGEQIGVPVFPEEDGKDPV 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 194 AVVFDALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVT 273
Cdd:COG0541 169 DIAKRALEYAKKNGYDVVIVDTAGRLHIDEELMDELKAIKAAVN------PDETLLVVDAMTGQDAVNVAKAFNEALGLT 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1090990736 274 GLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDP 317
Cdd:COG0541 243 GVILTKLDGDARGGAALSIRAVTGKPIKFIGTGEKLDDLEPFHP 286
|
|
| SRP_G_like |
cd03115 |
GTPase domain similar to the signal recognition particle subunit 54; The signal recognition ... |
127-321 |
8.56e-79 |
|
GTPase domain similar to the signal recognition particle subunit 54; The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal signal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognate receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Pssm-ID: 349769 [Multi-domain] Cd Length: 193 Bit Score: 238.81 E-value: 8.56e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTE 206
Cdd:cd03115 2 VILLVGLQGSGKTTTLAKLARYYQEKGKKVLLIAADTFRAAAVEQLKTLAEKLGVPVFESYTGTDPASIAQEAVEKAKLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 207 QADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKG 286
Cdd:cd03115 82 GYDVLLVDTAGRLQKDEPLMEELKKVKEVES------PDEVLLVLDATTGQEALSQAKAFNEAVGLTGVILTKLDGTAKG 155
|
170 180 190
....*....|....*....|....*....|....*
gi 1090990736 287 GIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFV 321
Cdd:cd03115 156 GAALSIVAETKKPIKFIGVGEKPEDLEPFDPERFV 190
|
|
| SRP_G |
cd18539 |
GTPase domain of signal recognition particle protein; The signal recognition particle (SRP) ... |
126-317 |
8.78e-72 |
|
GTPase domain of signal recognition particle protein; The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal signal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Pssm-ID: 349786 Cd Length: 193 Bit Score: 220.93 E-value: 8.78e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 126 TVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKT 205
Cdd:cd18539 1 TVILLVGLQGSGKTTTAAKLALYLKKKGKKVLLVAADVYRPAAIEQLQTLGEQVGVPVFESGDGQSPVDIAKRALEKAKE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 EQADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAK 285
Cdd:cd18539 81 EGFDVVIVDTAGRLHIDEELMDELKEIKEVLN------PDEVLLVVDAMTGQDAVNVAKAFNERLGLTGVVLTKLDGDAR 154
|
170 180 190
....*....|....*....|....*....|..
gi 1090990736 286 GGIVLAIRNELHLPVKLVGLGEGIDDLEPFDP 317
Cdd:cd18539 155 GGAALSIRHVTGKPIKFIGVGEKIEDLEPFHP 186
|
|
| PRK00771 |
PRK00771 |
signal recognition particle protein Srp54; Provisional |
62-321 |
2.14e-65 |
|
signal recognition particle protein Srp54; Provisional
Pssm-ID: 179118 [Multi-domain] Cd Length: 437 Bit Score: 212.37 E-value: 2.14e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 62 TLIGADVGFETAIRITEALRQEVKLRNAKKSAEVQNAII----EKLVDLYEAEGINEVNELNIQedgltVILFVGVNGVG 137
Cdd:PRK00771 33 ALLQADVNVKLVKELSKSIKERALEEEPPKGLTPREHVIkivyEELVKLLGEETEPLVLPLKPQ-----TIMLVGLQGSG 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 138 KTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALEraKTEQADVLLVDTAG 217
Cdd:PRK00771 108 KTTTAAKLARYFKKKGLKVGLVAADTYRPAAYDQLKQLAEKIGVPFYGDPDNKDAVEIAKEGLE--KFKKADVIIVDTAG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 218 RLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELH 297
Cdd:PRK00771 186 RHALEEDLIEEMKEIKEAVK------PDEVLLVIDATIGQQAKNQAKAFHEAVGIGGIIITKLDGTAKGGGALSAVAETG 259
|
250 260
....*....|....*....|....
gi 1090990736 298 LPVKLVGLGEGIDDLEPFDPNDFV 321
Cdd:PRK00771 260 APIKFIGTGEKIDDLERFDPDRFI 283
|
|
| SRP54_G |
cd17875 |
GTPase domain of the signal recognition 54 kDa subunit; The signal recognition particle (SRP) ... |
127-321 |
6.89e-62 |
|
GTPase domain of the signal recognition 54 kDa subunit; The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal signal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Pssm-ID: 349784 Cd Length: 193 Bit Score: 195.49 E-value: 6.89e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTE 206
Cdd:cd17875 2 VIMFVGLQGSGKTTTAAKLAYYYQKKGYKVGLVCADTFRAGAFDQLKQNATKARVPFYGSYTEKDPVKIAKEGVEKFKKE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 207 QADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKG 286
Cdd:cd17875 82 KFDIIIVDTSGRHKQEEELFEEMKQISDAVK------PDEVILVIDASIGQAAEDQAKAFKEAVDIGSVIITKLDGHAKG 155
|
170 180 190
....*....|....*....|....*....|....*
gi 1090990736 287 GIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFV 321
Cdd:cd17875 156 GGALSAVAATGAPIIFIGTGEHIDDLEPFDPKRFV 190
|
|
| SRP54_euk |
TIGR01425 |
signal recognition particle protein SRP54; This model represents examples from the eukaryotic ... |
63-330 |
3.19e-47 |
|
signal recognition particle protein SRP54; This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Pssm-ID: 273615 [Multi-domain] Cd Length: 428 Bit Score: 164.62 E-value: 3.19e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 63 LIGADVGFETAIRITEALRQEVKLRN----AKKSAEVQNAIIEKLVDLYEAEgineVNELNIQEDGLTVILFVGVNGVGK 138
Cdd:TIGR01425 38 LLESDVNPKLVRQMRNNIKKKINLEDiasgINKRKLIQDAVFEELCNLVDPG----VEAFTPKKGKTCVIMFVGLQGAGK 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 139 TTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTEQADVLLVDTAGR 218
Cdd:TIGR01425 114 TTTCTKLAYYYKRRGFKPALVCADTFRAGAFDQLKQNATKAGIPFYGSYEESDPVKIASEGVEKFRKEKFDIIIVDTSGR 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 219 LQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHL 298
Cdd:TIGR01425 194 HKQEKELFEEMQQVREAIK------PDSIIFVMDGSIGQAAFGQAKAFKDSVEVGSVIITKLDGHAKGGGALSAVAATKS 267
|
250 260 270
....*....|....*....|....*....|....*..
gi 1090990736 299 PVKLVGLGEGIDDLEPFDPNDFV-----VGLFKGLLK 330
Cdd:TIGR01425 268 PIIFIGTGEHVDEFEIFDAEPFVskllgMGDLKGLID 304
|
|
| SRalpha_C |
cd17876 |
C-terminal domain of signal recognition particle receptor alpha subunit; The ... |
127-321 |
7.92e-44 |
|
C-terminal domain of signal recognition particle receptor alpha subunit; The signal-recognition particle (SRP) receptor (SR) alpha-subunit (SRalpha) of the eukaryotic SR interacts with the signal-recognition particle (SRP) and is essential for the co-translational membrane targeting of proteins.
Pssm-ID: 349785 Cd Length: 204 Bit Score: 149.30 E-value: 7.92e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAAVVFDALERAKTE 206
Cdd:cd17876 2 VIVFCGVNGVGKSTNLAKIAYWLLSNGFRVLIAACDTFRSGAVEQLRTHARRLGVELYEKGYGKDPAAVAKEAIKYARDQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 207 QADVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQAKQF----------KETTDVTGLV 276
Cdd:cd17876 82 GFDVVLIDTAGRMQNNEPLMRALAKLIKENN------PDLVLFVGEALVGNDAVDQLKKFnqaladyspsDNPRLIDGIV 155
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1090990736 277 LTKLDGTA-KGGIVLAIRNELHLPVKLVGLGEGIDDLEPFDPNDFV 321
Cdd:cd17876 156 LTKFDTIDdKVGAALSMVYATGQPIVFVGTGQTYTDLKKLNVKAVV 201
|
|
| FlhF |
COG1419 |
Flagellar biosynthesis GTPase FlhF [Cell motility]; |
63-332 |
1.00e-36 |
|
Flagellar biosynthesis GTPase FlhF [Cell motility];
Pssm-ID: 441029 [Multi-domain] Cd Length: 361 Bit Score: 135.38 E-value: 1.00e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 63 LIGADVGFETAIRITEALRQEVKLRNAKKSaeVQNAIIEKLvdlyeaeginEVNELNIQEDGlTVILFVGVNGVGKTTSI 142
Cdd:COG1419 115 LLEAGVSPELARELLEKLPEDLSAEEAWRA--LLEALARRL----------PVAEDPLLDEG-GVIALVGPTGVGKTTTI 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 143 GKLAHQFK-NEGKKVLMAAADTFRAGAIDQLVVWGERAGVevvrgnaggdPAAVVFDALERAKT----EQADVLLVDTAG 217
Cdd:COG1419 182 AKLAARFVlRGKKKVALITTDTYRIGAVEQLKTYARILGV----------PVEVAYDPEELKEAlerlRDKDLVLIDTAG 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 218 RLQNKVNLMNELEKIKRVIQrelpeaPQETLLVLDATTGQNAMVQ-AKQFKEtTDVTGLVLTKLDGTAKGGIVLAIRNEL 296
Cdd:COG1419 252 RSPRDPELIEELKALLDAGP------PIEVYLVLSATTKYEDLKEiVEAFSS-LGLDGLILTKLDETASLGSILNLLIRT 324
|
250 260 270
....*....|....*....|....*....|....*..
gi 1090990736 297 HLPVKLVGLGEGI-DDLEPFDPNDFVVGLFKGLLKEE 332
Cdd:COG1419 325 GLPLSYITNGQRVpEDIEVADPERLARLLLGGLEEEE 361
|
|
| FlhF |
cd17873 |
signal-recognition particle GTPase FlhF; FlhF protein is a signal-recognition particle (SRP) ... |
127-321 |
1.45e-32 |
|
signal-recognition particle GTPase FlhF; FlhF protein is a signal-recognition particle (SRP)-type GTPase that is essential for the placement and assembly of polar flagella. It is similar to the 54 kd subunit (SRP54) of the signal recognition particle (SRP) that mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal signal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR).
Pssm-ID: 349782 [Multi-domain] Cd Length: 189 Bit Score: 119.58 E-value: 1.45e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQFK-NEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPAavvfDALERAKt 205
Cdd:cd17873 2 VIALVGPTGVGKTTTLAKLAARYVlKKGKKVALITTDTYRIGAVEQLKTYAEIMGIPVEVAEDPEDLA----DALERLS- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 206 eQADVLLVDTAGRLQNKVNLMNELEKIKRViqrelpEAPQETLLVLDATTGQNAMVQ-AKQFKeTTDVTGLVLTKLDGTA 284
Cdd:cd17873 77 -DRDLILIDTAGRSPRDKEQLEELKELLGA------GEDIEVHLVLSATTKAKDLKEiIERFS-PLGYRGLILTKLDETT 148
|
170 180 190
....*....|....*....|....*....|....*...
gi 1090990736 285 KGGIVLAIRNELHLPVKLVGLGEGI-DDLEPFDPNDFV 321
Cdd:cd17873 149 SLGSVLSVLAESQLPVSYVTTGQRVpEDIEVASPLRLA 186
|
|
| flhF |
PRK05703 |
flagellar biosynthesis protein FlhF; |
92-332 |
1.30e-25 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235570 [Multi-domain] Cd Length: 424 Bit Score: 106.13 E-value: 1.30e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 92 SAEVQNAIIEKLVDLYEAEGINEV--------NELNIQEDGLT----VILFVGVNGVGKTTSIGKLAHQF--KNEGKKVL 157
Cdd:PRK05703 176 SPEIAEKLLKLLLEHMPPRERTAWryllellaNMIPVRVEDILkqggVVALVGPTGVGKTTTLAKLAARYalLYGKKKVA 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 158 MAAADTFRAGAIDQLVVWGERAGVevvrgnaggdPAAVVFDA--LERAKTEQA--DVLLVDTAGRLQNKVNLMNELEKIK 233
Cdd:PRK05703 256 LITLDTYRIGAVEQLKTYAKIMGI----------PVEVVYDPkeLAKALEQLRdcDVILIDTAGRSQRDKRLIEELKALI 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 234 rviqrELPEAPQETLLVLDATTGQNAMVQA-KQFKEtTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGI-DD 311
Cdd:PRK05703 326 -----EFSGEPIDVYLVLSATTKYEDLKDIyKHFSR-LPLDGLIFTKLDETSSLGSILSLLIESGLPISYLTNGQRVpDD 399
|
250 260
....*....|....*....|.
gi 1090990736 312 LEPFDPNDFVVGLFKGLLKEE 332
Cdd:PRK05703 400 IKVANPEELVRLLLGGFNKSE 420
|
|
| PRK12727 |
PRK12727 |
flagellar biosynthesis protein FlhF; |
127-312 |
1.80e-17 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 83.12 E-value: 1.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQF--KNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDpaavVFDALERAK 204
Cdd:PRK12727 352 VIALVGPTGAGKTTTIAKLAQRFaaQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEADSAES----LLDLLERLR 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 205 TEQadVLLVDTAGRLQNKVNLMNELEKIKRVIQrelpeapQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTA 284
Cdd:PRK12727 428 DYK--LVLIDTAGMGQRDRALAAQLNWLRAARQ-------VTSLLVLPANAHFSDLDEVVRRFAHAKPQGVVLTKLDETG 498
|
170 180
....*....|....*....|....*....
gi 1090990736 285 KGGIVLAIRNELHLPVKLVGLGEGI-DDL 312
Cdd:PRK12727 499 RFGSALSVVVDHQMPITWVTDGQRVpDDL 527
|
|
| FlhF |
TIGR03499 |
flagellar biosynthetic protein FlhF; [Cellular processes, Chemotaxis and motility] |
92-217 |
8.22e-16 |
|
flagellar biosynthetic protein FlhF; [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274609 [Multi-domain] Cd Length: 282 Bit Score: 76.22 E-value: 8.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 92 SAEVQNAIIEKLVDLYEAEGI---------NEVNELNIQEDGLT---VILFVGVNGVGKTTSIGKLAHQF--KNEGKKVL 157
Cdd:TIGR03499 149 SEELARELLEKLPEDADAEDAwrwlrealeGMLPVKPEEDPILEqggVIALVGPTGVGKTTTLAKLAARFalEHGKKKVA 228
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1090990736 158 MAAADTFRAGAIDQLVVWGERAGVevvrgnaggdPAAVVFDA--LERAKTE--QADVLLVDTAG 217
Cdd:TIGR03499 229 LITTDTYRIGAVEQLKTYAEILGI----------PVKVARDPkeLREALDRlrDKDLILIDTAG 282
|
|
| flhF |
PRK11889 |
flagellar biosynthesis protein FlhF; |
79-309 |
1.30e-14 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 183360 [Multi-domain] Cd Length: 436 Bit Score: 74.33 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 79 ALRQEVKLRNAK--KSAEVQNAIIEKLVDLYEAEginevnelNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKV 156
Cdd:PRK11889 201 AEKLKVKFENATmiTEEEVIEYILEDMRSHFNTE--------NVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTV 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 157 LMAAADTFRAGAIDQLVVWGERAGVEVVrgnAGGDPAAVVfDALERAKTE-QADVLLVDTAGRLQNKVNLMNEL-EKIKR 234
Cdd:PRK11889 273 GFITTDHSRIGTVQQLQDYVKTIGFEVI---AVRDEAAMT-RALTYFKEEaRVDYILIDTAGKNYRASETVEEMiETMGQ 348
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1090990736 235 ViqrelpeAPQETLLVLDATTGQNAMVQ-AKQFKEtTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGI 309
Cdd:PRK11889 349 V-------EPDYICLTLSASMKSKDMIEiITNFKD-IHIDGIVFTKFDETASSGELLKIPAVSSAPIVLMTDGQDV 416
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
127-255 |
2.91e-13 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 66.24 E-value: 2.91e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVvwgeraGVEVVRGNAGGDPAAVVFDALERAKTE 206
Cdd:smart00382 4 VILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLL------LIIVGGKKASGSGELRLRLALALARKL 77
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1090990736 207 QADVLLVDTAGRLQNKVNLMNELEKIkrVIQRELPEAPQETLLVLDATT 255
Cdd:smart00382 78 KPDVLILDEITSLLDAEQEALLLLLE--ELRLLLLLKSEKNLTVILTTN 124
|
|
| flhF |
PRK14723 |
flagellar biosynthesis regulator FlhF; Provisional |
127-321 |
5.88e-13 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 237802 [Multi-domain] Cd Length: 767 Bit Score: 69.44 E-value: 5.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQF-KNEGK-KVLMAAADTFRAGAIDQLVVWGERAGVevvrgnaggdPAAVVFDA--LER 202
Cdd:PRK14723 187 VLALVGPTGVGKTTTTAKLAARCvAREGAdQLALLTTDSFRIGALEQLRIYGRILGV----------PVHAVKDAadLRF 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 203 AKTEQAD--VLLVDTAGRLQNKVNLMNELEKIKRViqrelpEAPQETLLVLDATT-GQ--NAMVQAKQFKETTDVTGLVL 277
Cdd:PRK14723 257 ALAALGDkhLVLIDTVGMSQRDRNVSEQIAMLCGV------GRPVRRLLLLNAAShGDtlNEVVHAYRHGAGEDVDGCII 330
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1090990736 278 TKLDGTAKGGIVL--AIRNElhLPVKLVGLGEGI-DDLEPFDPNDFV 321
Cdd:PRK14723 331 TKLDEATHLGPALdtVIRHR--LPVHYVSTGQKVpEHLELAQADELV 375
|
|
| flhF |
PRK06731 |
flagellar biosynthesis regulator FlhF; Validated |
79-309 |
8.02e-13 |
|
flagellar biosynthesis regulator FlhF; Validated
Pssm-ID: 75717 [Multi-domain] Cd Length: 270 Bit Score: 67.46 E-value: 8.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 79 ALRQEVKLRNAkksaevqNAIIEKLVDLYEAEGINEVNELNIQEDGLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLM 158
Cdd:PRK06731 36 AEKLKVKFENA-------TMITEEVIEYILEDMSSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGF 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 159 AAADTFRAGAIDQLVVWGERAGVEVVrgnAGGDPAAVVfDALERAKTE-QADVLLVDTAGRLQNKVNLMNELekIKRVIQ 237
Cdd:PRK06731 109 ITTDHSRIGTVQQLQDYVKTIGFEVI---AVRDEAAMT-RALTYFKEEaRVDYILIDTAGKNYRASETVEEM--IETMGQ 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1090990736 238 RElpeaPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGI 309
Cdd:PRK06731 183 VE----PDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFTKFDETASSGELLKIPAVSSAPIVLMTDGQDV 250
|
|
| PRK12724 |
PRK12724 |
flagellar biosynthesis regulator FlhF; Provisional |
71-316 |
1.89e-12 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 183703 [Multi-domain] Cd Length: 432 Bit Score: 67.68 E-value: 1.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 71 ETAIRITEALRQEVKLRNAKKSAEVQNAIIEKLV---DLYEAEGINEVNelniqedgltVILFVGVNGVGKTTSIGKLAH 147
Cdd:PRK12724 176 EMASKLEERLSPVDQGRNHNVTERAVTYLEERVSvdsDLFSGTGKNQRK----------VVFFVGPTGSGKTTSIAKLAA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 148 Q-FKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVrgnaggdPAAVVFDALERAKTEQADVLLVDTAGRLQNKvnlM 226
Cdd:PRK12724 246 KyFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFY-------PVKDIKKFKETLARDGSELILIDTAGYSHRN---L 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 227 NELEKIKRVIQRELPEAPQETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLG 306
Cdd:PRK12724 316 EQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNYRRILLTKLDEADFLGSFLELADTYSKSFTYLSVG 395
|
250
....*....|
gi 1090990736 307 EGIddlePFD 316
Cdd:PRK12724 396 QEV----PFD 401
|
|
| flhF |
PRK14722 |
flagellar biosynthesis regulator FlhF; Provisional |
122-330 |
6.92e-12 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 173185 [Multi-domain] Cd Length: 374 Bit Score: 65.51 E-value: 6.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 122 EDGLT----VILFVGVNGVGKTTSIGKLAHQ--FKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGGDPaav 195
Cdd:PRK14722 130 EDALMerggVFALMGPTGVGKTTTTAKLAARcvMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPVHAVKDGGDL--- 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 196 vfdALERAKTEQADVLLVDTAGRLQNKVNLMNELEKIKRViqrelpEAPQETLLVLDATTGQNAMVQAKQFKETT----- 270
Cdd:PRK14722 207 ---QLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGA------DTPVQRLLLLNATSHGDTLNEVVQAYRSAagqpk 277
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1090990736 271 ----DVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGIddlepfdPNDFVVGLFKGLLK 330
Cdd:PRK14722 278 aalpDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKV-------PENLYVATKKFLLK 334
|
|
| PRK12726 |
PRK12726 |
flagellar biosynthesis regulator FlhF; Provisional |
124-311 |
1.57e-09 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 183704 [Multi-domain] Cd Length: 407 Bit Score: 58.59 E-value: 1.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 124 GLTVILFVGVNGVGKTTSIGKLAHQFKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAggdPAAVVFDALERA 203
Cdd:PRK12726 205 NHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATS---PAELEEAVQYMT 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 204 KTEQADVLLVDTAGRLQNKVNLMNELEKIKRVIQRELpeapqETLLVLDATTGQNAMVQAKQFKETTdVTGLVLTKLDGT 283
Cdd:PRK12726 282 YVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDL-----TCFTFSSGMKSADVMTILPKLAEIP-IDGFIITKMDET 355
|
170 180
....*....|....*....|....*...
gi 1090990736 284 AKGGIVLAIRNELHLPVKLVGLGEGIDD 311
Cdd:PRK12726 356 TRIGDLYTVMQETNLPVLYMTDGQNITE 383
|
|
| flhF |
PRK14721 |
flagellar biosynthesis regulator FlhF; Provisional |
127-298 |
4.28e-07 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 173184 [Multi-domain] Cd Length: 420 Bit Score: 51.10 E-value: 4.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 127 VILFVGVNGVGKTTSIGKLAHQ--FKNEGKKVLMAAADTFRAGAIDQLVVWGERAGVeVVRGNAGGDPAAVVFDALERAK 204
Cdd:PRK14721 193 VYALIGPTGVGKTTTTAKLAARavIRHGADKVALLTTDSYRIGGHEQLRIYGKLLGV-SVRSIKDIADLQLMLHELRGKH 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 205 TeqadvLLVDTAGRLQNKVNLMNEL-------EKIKRviqrelpeapqetLLVLDATTGQNAMVQAKQFKETTDVTGLVL 277
Cdd:PRK14721 272 M-----VLIDTVGMSQRDQMLAEQIamlsqcgTQVKH-------------LLLLNATSSGDTLDEVISAYQGHGIHGCII 333
|
170 180
....*....|....*....|...
gi 1090990736 278 TKLDGTAKGGIVL--AIRNELHL 298
Cdd:PRK14721 334 TKVDEAASLGIALdaVIRRKLVL 356
|
|
| PRK12723 |
PRK12723 |
flagellar biosynthesis regulator FlhF; Provisional |
76-309 |
5.81e-07 |
|
flagellar biosynthesis regulator FlhF; Provisional
Pssm-ID: 183702 [Multi-domain] Cd Length: 388 Bit Score: 50.67 E-value: 5.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 76 ITEALRQEVKLRNAKKSAEVQNAIIeklvdLYEAEGINEVNELnIQEDGLTVILFVGVNGVGKTTSIGKLAHQF----KN 151
Cdd:PRK12723 131 INEFIKKEFSLSDLDDYDKVRDSVI-----IYIAKTIKCSGSI-IDNLKKRVFILVGPTGVGKTTTIAKLAAIYginsDD 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 152 EGKKVLMAAADTFRAGAIDQLVVWGERAGVEVvrgnaggdPAAVVFDALERAKT--EQADVLLVDTAGRlqNKVNLMNeL 229
Cdd:PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPV--------KAIESFKDLKEEITqsKDFDLVLVDTIGK--SPKDFMK-L 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 230 EKIKRVIQRELPEApqETLLVLDATTGQNAMVQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEGI 309
Cdd:PRK12723 274 AEMKELLNACGRDA--EFHLAVSSTTKTSDVKEIFHQFSPFSYKTVIFTKLDETTCVGNLISLIYEMRKEVSYVTDGQIV 351
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
131-298 |
1.06e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 46.88 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 131 VGVNGVGKTTSIGKLAHQF--KNEGKKVLMAAADTFRAGAIDQLVVWGERAGVEV--VRGnaGGDPAAvvfdALE--RAK 204
Cdd:PRK06995 262 MGPTGVGKTTTTAKLAARCvmRHGASKVALLTTDSYRIGGHEQLRIYGKILGVPVhaVKD--AADLRL----ALSelRNK 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1090990736 205 teqaDVLLVDTAGRLQnKVNLMNE----LEKIKRVIQRelpeapqetLLVLDAT-TGQ--NAMVQAKQFKettDVTGLVL 277
Cdd:PRK06995 336 ----HIVLIDTIGMSQ-RDRMVSEqiamLHGAGAPVKR---------LLLLNATsHGDtlNEVVQAYRGP---GLAGCIL 398
|
170 180
....*....|....*....|...
gi 1090990736 278 TKLDGTAKGGIVL--AIRNELHL 298
Cdd:PRK06995 399 TKLDEAASLGGALdvVIRYKLPL 421
|
|
| SRP54_N |
smart00963 |
SRP54-type protein, helical bundle domain; This entry represents the N-terminal helical bundle ... |
62-107 |
1.01e-04 |
|
SRP54-type protein, helical bundle domain; This entry represents the N-terminal helical bundle domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species.
Pssm-ID: 214941 [Multi-domain] Cd Length: 77 Bit Score: 40.23 E-value: 1.01e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1090990736 62 TLIGADVGFETAIRITEALRQEVK---LRNAKKSAEVQNAIIEKLVDLY 107
Cdd:smart00963 29 ALLEADVGVEVVKEIIERVKEKAKgevLKGLTPKQEVKKILKEELVKIL 77
|
|
| SRP54_N |
pfam02881 |
SRP54-type protein, helical bundle domain; |
62-103 |
1.46e-03 |
|
SRP54-type protein, helical bundle domain;
Pssm-ID: 460734 [Multi-domain] Cd Length: 75 Bit Score: 36.68 E-value: 1.46e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1090990736 62 TLIGADVGFETAIRITEALRQ-EVKLRNAKKSAEVQNAIIEKL 103
Cdd:pfam02881 33 ALLEADVGVEVVKKIIERLREkAVGEKKLKPPQEVKKILKEEL 75
|
|
| |
