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Conserved domains on  [gi|1089667460|dbj|BAV82678|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Cylicostephanus goldi]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009558)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 7-280 3.83e-129

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177153  Cd Length: 284  Bit Score: 368.46  E-value: 3.83e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   7 MIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYL 86
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  87 EWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSFVS 166
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 167 EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLFFKFSMVVSFV 246
Cdd:MTH00090  161 SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLMLFL 240

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1089667460 247 VFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:MTH00090  241 IFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLI 274
 
Name Accession Description Interval E-value
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 7-280 3.83e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 368.46  E-value: 3.83e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   7 MIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYL 86
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  87 EWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSFVS 166
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 167 EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLFFKFSMVVSFV 246
Cdd:MTH00090  161 SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLMLFL 240

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1089667460 247 VFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:MTH00090  241 IFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLI 274
NADHdh pfam00146
NADH dehydrogenase;
7-280 1.74e-65

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 206.94  E-value: 1.74e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   7 MIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYL 86
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  87 EWYILPY--FFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSF 164
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 165 VS--------EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLF 236
Cdd:pfam00146 161 SEiveaqaggWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1089667460 237 FK------------FSMVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:pfam00146 241 LGgwlgpfplpgllWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLA 296
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-280 1.13e-60

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 195.35  E-value: 1.13e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDF--LSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVH 158
Cdd:COG1005    88 FIPALLAFAVIPFGPGLvlADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFV----SEFNLSLLIIYLP-----FLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFS 229
Cdd:COG1005   168 AGSLNLSeiveAQAGGLWFILPQPlafvvFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1089667460 230 VMSSMLFF----------KFSMVVSFVVF--------SIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:COG1005   248 ALATTLFLggwlgpfpilPLGGLPGILWFllktlffiFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 7-280 3.83e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 368.46  E-value: 3.83e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   7 MIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYL 86
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  87 EWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSFVS 166
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 167 EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLFFKFSMVVSFV 246
Cdd:MTH00090  161 SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLMLFL 240

                         250       260       270
                  ....*....|....*....|....*....|....
gi 1089667460 247 VFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:MTH00090  241 IFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLI 274
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 5-279 1.59e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 222.44  E-value: 1.59e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   5 FLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVM 84
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  85 YLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSF 164
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 165 --VSEFNLSLLIIYLPFLVM------IIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLF 236
Cdd:MTH00143  164 ieISESQFSVWLGFLMFPVFlmwfvsCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1089667460 237 FK------------FSMVVSFVVFsIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00143  244 FGgssvlfllggvvFMFKVLFFAF-LFIWVRASYPRFRYDLLMMLCWKSFLPFSL 297
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-280 3.46e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 213.86  E-value: 3.46e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYS 160
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 161 MFSFVS----EFNLSLLIIYLP----FLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMS 232
Cdd:MTH00193  161 SFNLLDfmnyQKYIWFIFFSFPlfliWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1089667460 233 SMLFF-------KFSMVVSFVVFSIIvFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:MTH00193  241 VLMFLggdllslLFYLKLLFISFLFI-WVRGTLPRFRYDKLMYLAWKSFLPLSLN 294
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 2-279 1.58e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 209.89  E-value: 1.58e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAF 81
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMV---H 158
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFlvlT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFVSE-----FNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSS 233
Cdd:MTH00225  161 YNLFDFSYNqkyfwFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1089667460 234 MLFFKFSMVVSFVVFSI--------IVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00225  241 ILFFGGFFVTIDLFLILkimllafwFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-279 1.06e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 208.21  E-value: 1.06e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMV--- 157
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILlsg 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 158 HYSMFSF-VSEFNLSLLIIYLPFLVM----IIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMS 232
Cdd:MTH00111  164 GYTLQTLaTTQEPLWLIFSSWPLAMMwyisTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 233 SMLFFKFS-------------MVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00111  244 TILFLNPStlnlppelftinlMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
NADHdh pfam00146
NADH dehydrogenase;
7-280 1.74e-65

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 206.94  E-value: 1.74e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   7 MIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYL 86
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  87 EWYILPY--FFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSF 164
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 165 VS--------EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLF 236
Cdd:pfam00146 161 SEiveaqaggWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1089667460 237 FK------------FSMVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:pfam00146 241 LGgwlgpfplpgllWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLA 296
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-279 8.24e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 202.83  E-value: 8.24e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYS 160
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 161 MFS---FVSEFNLSLLIIYLPFL-----VMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMS 232
Cdd:MTH00218  161 GFSlegFNLTQETIWLLIPEWPLalmwfISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1089667460 233 SMLFFKFS------MVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00218  241 VILFLGTSlttinlMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-279 1.53e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 202.28  E-value: 1.53e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYS 160
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 161 MFSF--------VSEFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMS 232
Cdd:MTH00195  161 SFDFtimvisqgFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1089667460 233 SMLFFKFSMVVSFVVFS-----IIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00195  241 TILFLGGGGTIIVALKSlflsfCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-279 2.15e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 202.16  E-value: 2.15e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYS 160
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 161 MFSFVSeFNLS-----LLIIYLPFLVM----IIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVM 231
Cdd:MTH00071  164 GFSLMN-FNTTqefmwLIIPAWPMAAMwfisTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1089667460 232 SSMLFFKFS-------------MVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00071  243 STILFLGSTynhlqpelstmnlMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-279 3.88e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 199.06  E-value: 3.88e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIIlmmVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAF 81
Cdd:MTH00134    9 IINPLAYI---VPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSM 161
Cdd:MTH00134   86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 162 FSfVSEFNLS-----LLIIYLPFLVM----IIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMS 232
Cdd:MTH00134  166 FT-LQTFNTAqesiwLLLPAWPLAAMwyisTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 233 SMLFFKFS-------------MVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00134  245 AILFLGAShiptlpelttinlMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-280 1.13e-60

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 195.35  E-value: 1.13e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDF--LSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVH 158
Cdd:COG1005    88 FIPALLAFAVIPFGPGLvlADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFV----SEFNLSLLIIYLP-----FLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFS 229
Cdd:COG1005   168 AGSLNLSeiveAQAGGLWFILPQPlafvvFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1089667460 230 VMSSMLFF----------KFSMVVSFVVF--------SIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:COG1005   248 ALATTLFLggwlgpfpilPLGGLPGILWFllktlffiFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 3-279 1.60e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 194.84  E-value: 1.60e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   3 MNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFV 82
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  83 VMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVhysmf 162
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL----- 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 163 sFVSEFNLSLLIIYLPFLVMII--------------AELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFF 228
Cdd:MTH00104  156 -MNGSFTLSTLITTQEHLWLIFpswplammwfistlAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMM 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1089667460 229 SVMSSMLFFKFS-------------MVVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00104  235 NALTTILFLGAFhnpympelyttnfTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-279 6.35e-58

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 188.26  E-value: 6.35e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAF 81
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSM 161
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 162 FSFVSEFNLS----LLIIYLPFLVM----IIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSS 233
Cdd:MTH00040  164 FSLSSISNSQngswLLFPCLPLFYIwfisTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 234 MLFF----KFSMVVSFVVFSIIV----------FIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00040  244 ILFLgggsPFNEIFPINIIIVGIkttflvflflWVRASYPRFRYDQLMFLTWKNYLPLSI 303
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-280 3.79e-56

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 183.47  E-value: 3.79e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   5 FLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVM 84
Cdd:PRK06076   13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  85 YLEWYILPYF--FDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMF 162
Cdd:PRK06076   93 FLAWAVIPFGpeLVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 163 SFV--------SEFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSM 234
Cdd:PRK06076  173 NLSdiveaqflSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITT 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1089667460 235 LFFK-----------------FSMVVSFVVFsIIVFIRSSYPRFRYDKMMTMFWFKFLPISLI 280
Cdd:PRK06076  253 LFLGgwlppfplgggipgaiwFVLKVAFFVF-LFIWLRATLPRYRYDQLMRLGWKVLLPLSLV 314
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-279 2.42e-52

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 173.43  E-value: 2.42e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   5 FLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVM 84
Cdd:MTH00010    6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  85 YLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSF 164
Cdd:MTH00010   86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 165 -----VSEFNLSLLIIYLPFLVMI--IAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLFF 237
Cdd:MTH00010  166 skiimSQYSWILLMIIPLTVSWFItnLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1089667460 238 KFS--------MVVSFVVFSIIVFI--RSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00010  246 SFIpsifisdlMLILKTVFLAFLFIwiRATFPRMRYDRLMNLTWKSFLPMSL 297
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-279 6.75e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 170.30  E-value: 6.75e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAF 81
Cdd:MTH00216    6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDFL--SFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHY 159
Cdd:MTH00216   86 TLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 160 SMFSFVS---------EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSV 230
Cdd:MTH00216  166 GSLSITEivlaqnngiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1089667460 231 MSSMLFFK---------------FSMVVSFVVFsIIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00216  246 LTTILFLGgwlspikyfkggagwFGLKVVFIIF-LFIWVRASFPRIRYDQLMALLWKSYLPLSL 308
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-279 2.77e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 163.36  E-value: 2.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   1 MIMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPY--FFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVH 158
Cdd:MTH00054   81 LTLAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFVS--------EFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSV 230
Cdd:MTH00054  161 VGSLNLTEivlaqkniWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1089667460 231 MSSMLF------------FKFSMVVSFVVFSIIVF----IRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00054  241 FGVILFlggwlvisgptsYFSNFVWFGIKIALIIFlfiwIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 8-279 5.93e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 150.17  E-value: 5.93e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   8 IILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAFVVMYLE 87
Cdd:MTH00029   13 LLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  88 WYILPYFFD-FLS-FEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVHYSMFSF- 164
Cdd:MTH00029   93 WAIVTMDQGvFLSdLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIs 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 165 ---VSEFNLSLLIIYLP----FLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSMLFF 237
Cdd:MTH00029  173 eivISQRSVWLIIPLFPaaimFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFL 252

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1089667460 238 K-------------------------------FSMVVSFVVFsiIVFIRSSYPRFRYDKMMTMFWFKFLPISL 279
Cdd:MTH00029  253 GgwlspldgiptppeafsifeqiasskssfwfFTKSSIFILF--FIWSRASFPRIRYDQLMKLLWKTYLPLSL 323
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-271 1.32e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 126.58  E-value: 1.32e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIAF 81
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMV---H 158
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLcygS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFVSEFNLSLLI---IYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFFSVMSSML 235
Cdd:MTH00058  161 YSLVDFYYSGWLSVLLfplIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1089667460 236 FFKFSMVVSFVVFSIIVFI--RSSYPRFRYDKMMTMFW 271
Cdd:MTH00058  241 FFGGGFVSIMLLFHLLFFMwaRATLPRVRYDYFVNFFW 278
ndhA CHL00032
NADH dehydrogenase subunit 1
 8-279 1.14e-23

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 98.87  E-value: 1.14e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   8 IILMMVFILQAIAFITL-------YERHLLGSSQNRLGPTKVSFMGVLQALLDGVKLLKKEQMTPLNSSDLSFLLVPGIA 80
Cdd:CHL00032   26 LIWILVPILTLVLGITIgvlvivwLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  81 FVVMYLEWYILPYFFDFLSFEYSMLFFLCLIGFSVYTT--LISGIVSKSKYGIVGALRASSQSVSYEIAFSLYLLAIMVH 158
Cdd:CHL00032  106 VISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIglLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 159 YSMFSFV------SEF-----NL-SLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLI 226
Cdd:CHL00032  186 SNSLSTVdiveaqSKYgfwgwNLwRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 227 FFSVMSSMLFF--------------KFSMVVSFVVFSIIVFI-----------------RSSYPRFRYDKMMTMFWFKFL 275
Cdd:CHL00032  266 VSSLFVTVLYLggwnlsipyifipeLFEINKTGGVFGTTIGIfitlaktylflfisittRWTLPRLRMDQLLNLGWKFLL 345


                  ....
gi 1089667460 276 PISL 279
Cdd:CHL00032  346 PISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
2-275 4.41e-20

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 87.93  E-value: 4.41e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460   2 IMNFLMIILMMVFILQAIAFITLYERHLLGSSQNRLGPtkvsfmGVLQALLDGVKLLKKEQMTPLNSSDLsFLLVPGIAF 81
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460  82 VVMYLEWYILPYFFDF--LSFEYSMLFFLCLIGFSVYTTLISGIVSKSKYGIVGALRASSQSVSYEIA-----FSLYL-- 152
Cdd:COG0650    74 AAMLLAALLVPVLTTGppLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPlllvlFALALla 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1089667460 153 ----LAIMVHYSMFSFVSEFNLSLLIIYLPFLVMIIAELNRAPFDFAEGESELVSGYNVEYASVAFVLLFLSEYGSLIFF 228
Cdd:COG0650   154 gstsLSDIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1089667460 229 SVMSSMLFFKFSM------------VVSFVVFSIIVFIRSSYPRFRYDKMMTMFWFKFL 275
Cdd:COG0650   234 LSLFVNLFLPWGIaltlllalllflLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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