|
Name |
Accession |
Description |
Interval |
E-value |
| YidC |
COG0706 |
Membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis]; |
219-459 |
4.23e-49 |
|
Membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440470 [Multi-domain] Cd Length: 212 Bit Score: 167.22 E-value: 4.23e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 219 DASFFDWIlVIPVAWLMSFFGGILGNsFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPQSQ 298
Cdd:COG0706 2 DYGWFGFI-AKPLFWLLNFLHSLVGN-WGLAIILLTLIVRLLLFPLTVKQYKSMAKMQELQPELKEIQEKYK--DDPQKL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 299 QQMQMemmAIYKKHGINVM-GCLMPFLQMPIFIAMYGVVRrititggmYTENVANTNFLGINLANTQDGIIgIVLAGLVG 377
Cdd:COG0706 78 QQEMM---KLYKEEGVNPLgGCLPMLIQMPIFIALYRVLR--------NSIELRHAPFLGIPDLSAPDPYY-IFLPILMG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 378 ATMFILQKISMkkpsytkntakhnpnpqAAQTEKTMKFVSYFMVIMMAFASYQS-NALALYWIFGNIYSLGQTL-VNRKL 455
Cdd:COG0706 146 VTMFLQQKLNP-----------------APAQDPQQKKMMYIMPLMFLFFFLSFpAGLVLYWVVSNLLTIGQQLiINRRL 208
|
....
gi 1088626578 456 NEKK 459
Cdd:COG0706 209 DKKK 212
|
|
| PRK01622 |
PRK01622 |
membrane protein insertase YidC; |
206-458 |
2.02e-40 |
|
membrane protein insertase YidC;
Pssm-ID: 179310 Cd Length: 256 Bit Score: 145.66 E-value: 2.02e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 206 VYVAGGEKPITTGDAS---FFDWILVIPVAWLMSFFGGILGNSFALGILFTTIVVRTLAWPI----YAKSNDLSIKMNVA 278
Cdd:PRK01622 17 VLVLSGCSNAAPIDAHsdgFFDHYFVYPFSFLIQFVAHHIGGSYGIAIIIVTLIIRSLMIPLavsqYKSQRGMQEKMAVM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 279 QPDMQRVQAKYATRKDPQSQQQMQMEMMAIYKKHGIN--VMGCLMPFLQMPIFIAMYGVVRRititggmyTENVANTNFL 356
Cdd:PRK01622 97 KPELDKIQAKLKVTKDLEKQKEYQKEMMELYKSGNINplAMGCLPLLIQMPILSAFYYAIRR--------TEEIASHSFL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 357 GINLANTQdgiigIVLAGLVGATMFILQKISMKKPSytkntakhnpNPQAAQTEKTMKFvsyFMVIMMAFASYQS-NALA 435
Cdd:PRK01622 169 WFNLGHAD-----HILPIIAGLTYFIQMKVSQSNGT----------SPEQVQMLKIQGI---MMPAMILFMSFAApSALV 230
|
250 260
....*....|....*....|...
gi 1088626578 436 LYWIFGNIYSLGQTLVNRKLNEK 458
Cdd:PRK01622 231 LYWITGGLFLMGQTIVLRKVMER 253
|
|
| 5TM_YidC_Alb3 |
cd20070 |
Five transmembrane core domain of membrane protein insertase YidC, Alb3, and similar proteins; ... |
248-454 |
7.72e-40 |
|
Five transmembrane core domain of membrane protein insertase YidC, Alb3, and similar proteins; This group is composed of the bacterial and chloroplastic members of the YidC/Oxa1/Alb3 protein family of insertases, including bacterial YidC, and chloroplastic ALBINO3 (Alb3) and Alb3-like proteins such as ALBINO3-like protein 1 (also called Alb4). Membrane protein insertase YidC, also called foldase YidC or membrane integrase YidC, facilitates proper folding, insertion, and assembly of inner membrane proteins and complexes. Depending on the nature of the substrate, YidC functions in a Sec-independent (YidC only) or a Sec-dependent manner as part of a complex containing YidC, the SecYEG channel, and SecDFYajC. YidC from Gram-negative bacteria contains an extra transmembrane segment (TM1) at the N-terminus and a large periplasmic domain, located between TM1 and TM2, that adopts a beta-super sandwich fold that is found in sugar-binding proteins such as galactose mutarotase. Alb3 and Alb3-like proteins are required for the post-translational insertion of the light-harvesting chlorophyll-binding proteins (LHCPs) into the chloroplast thylakoid membrane. Alb3 acts independently and may also function cooperatively with the thylakoid cpSecYE translocase to insert proteins co-translationally into the thylakoid membrane, similar to bacterial YidC that can function with the SecYEG translocase. YidC/Oxa1/Alb3 family insertases contain a core domain of five transmembrane (5TM) segments that is essential to insertase function.
Pssm-ID: 410994 [Multi-domain] Cd Length: 181 Bit Score: 141.36 E-value: 7.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 248 LGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGIN-VMGCLMPFLQM 326
Cdd:cd20070 2 LAIILLTILIRLLLLPLTLKQYKSMKKMQELQPKIKEIQEKYK--DDK---QKLQQEMMKLYKEHGVNpLGGCLPLLIQM 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 327 PIFIAMYGVVRRititggmyTENVANTNFLGINLANTQDGIIGIvLAGLVGATMFILQKISMKKPSytkntakhnpnpqa 406
Cdd:cd20070 77 PIFIALYQVLRN--------SIELRGAPFLWWILDLSAPDPYYI-LPILMGVTMFLQQKLTPTPTD-------------- 133
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1088626578 407 aQTEKTMKFVSYFMVIMMAFASYQSNA-LALYWIFGNIYSLGQTLVNRK 454
Cdd:cd20070 134 -DQAPQQKMMMYFMPVMFTFIFLSFPSgLVLYWLVSNLFSIIQQLIINK 181
|
|
| 60KD_IMP |
pfam02096 |
60Kd inner membrane protein; |
246-454 |
4.16e-38 |
|
60Kd inner membrane protein;
Pssm-ID: 460443 [Multi-domain] Cd Length: 187 Bit Score: 137.22 E-value: 4.16e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 246 FALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGINVM-GCLMPFL 324
Cdd:pfam02096 1 YGLAIILLTILIKLILFPLTYKQYKSMAKMQELQPEMKEIQEKYK--DDR---QKLQQEMMKLYKKEGVNPLgGCLPMLI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 325 QMPIFIAMYGVVRRITITGGmytenvANTNFLGINLANT--QDGIIGIVLAGLVGATMFILQKISMKkpsytkntakhnP 402
Cdd:pfam02096 76 QMPIFIALYRVLRNSIELRH------APFFLWIADLSAPdpISILHYYILPILMGVTMFLQQKLTPA------------P 137
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1088626578 403 NPQAAQTEKTMkfvSYFMVIMMAFASYQSNA-LALYWIFGNIYSLGQTLVNRK 454
Cdd:pfam02096 138 QDQPPQMKMMM---LYFMPLMFLFFFLNFPAgLVLYWVVSNLLSIGQQLIINR 187
|
|
| yidC_oxa1_cterm |
TIGR03592 |
membrane protein insertase, YidC/Oxa1 family, C-terminal domain; This model describes ... |
245-451 |
2.74e-37 |
|
membrane protein insertase, YidC/Oxa1 family, C-terminal domain; This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274665 [Multi-domain] Cd Length: 179 Bit Score: 134.53 E-value: 2.74e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 245 SFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGIN-VMGCLMPF 323
Cdd:TIGR03592 1 NWGLAIILLTIIVRLILLPLTLKQYKSMRKMQELQPKLKEIQEKYK--EDP---QKLQQEMMKLYKEEGVNpLGGCLPLL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 324 LQMPIFIAMYGVVRRititggmyTENVANTNFLGI-NLAnTQDGIigIVLAGLVGATMFILQKISMKKPSytkntakhnp 402
Cdd:TIGR03592 76 IQMPIFIALYQVLLR--------SIELRHAPFLWIiDLS-SPDPY--YILPILMGVTMFLQQKLSPKGPP---------- 134
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1088626578 403 npqaaqTEKTMKFVSYFMVIMMAFASYQ-SNALALYWIFGNIYSLGQTLV 451
Cdd:TIGR03592 135 ------DPAQQKMMMYFMPLMFLFFFLSfPAGLVLYWVVSNLFTIIQQLI 178
|
|
| Big_3 |
pfam07523 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
137-208 |
3.35e-03 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
Pssm-ID: 400072 [Multi-domain] Cd Length: 67 Bit Score: 36.12 E-value: 3.35e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1088626578 137 QIGESFDPTGIKIYAVQRDGDITVlngedvaeSFDDggYEPLGDDGFHNKYGYDVTYTHEGttVAKTFEVYV 208
Cdd:pfam07523 8 YVGDSWDAEDNFVSATYKDGDAEV--------PFDD--VEVSGTVDSTKAGEYTVTYTYKG--VSATFTVTV 67
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| YidC |
COG0706 |
Membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis]; |
219-459 |
4.23e-49 |
|
Membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440470 [Multi-domain] Cd Length: 212 Bit Score: 167.22 E-value: 4.23e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 219 DASFFDWIlVIPVAWLMSFFGGILGNsFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPQSQ 298
Cdd:COG0706 2 DYGWFGFI-AKPLFWLLNFLHSLVGN-WGLAIILLTLIVRLLLFPLTVKQYKSMAKMQELQPELKEIQEKYK--DDPQKL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 299 QQMQMemmAIYKKHGINVM-GCLMPFLQMPIFIAMYGVVRrititggmYTENVANTNFLGINLANTQDGIIgIVLAGLVG 377
Cdd:COG0706 78 QQEMM---KLYKEEGVNPLgGCLPMLIQMPIFIALYRVLR--------NSIELRHAPFLGIPDLSAPDPYY-IFLPILMG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 378 ATMFILQKISMkkpsytkntakhnpnpqAAQTEKTMKFVSYFMVIMMAFASYQS-NALALYWIFGNIYSLGQTL-VNRKL 455
Cdd:COG0706 146 VTMFLQQKLNP-----------------APAQDPQQKKMMYIMPLMFLFFFLSFpAGLVLYWVVSNLLTIGQQLiINRRL 208
|
....
gi 1088626578 456 NEKK 459
Cdd:COG0706 209 DKKK 212
|
|
| PRK01622 |
PRK01622 |
membrane protein insertase YidC; |
206-458 |
2.02e-40 |
|
membrane protein insertase YidC;
Pssm-ID: 179310 Cd Length: 256 Bit Score: 145.66 E-value: 2.02e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 206 VYVAGGEKPITTGDAS---FFDWILVIPVAWLMSFFGGILGNSFALGILFTTIVVRTLAWPI----YAKSNDLSIKMNVA 278
Cdd:PRK01622 17 VLVLSGCSNAAPIDAHsdgFFDHYFVYPFSFLIQFVAHHIGGSYGIAIIIVTLIIRSLMIPLavsqYKSQRGMQEKMAVM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 279 QPDMQRVQAKYATRKDPQSQQQMQMEMMAIYKKHGIN--VMGCLMPFLQMPIFIAMYGVVRRititggmyTENVANTNFL 356
Cdd:PRK01622 97 KPELDKIQAKLKVTKDLEKQKEYQKEMMELYKSGNINplAMGCLPLLIQMPILSAFYYAIRR--------TEEIASHSFL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 357 GINLANTQdgiigIVLAGLVGATMFILQKISMKKPSytkntakhnpNPQAAQTEKTMKFvsyFMVIMMAFASYQS-NALA 435
Cdd:PRK01622 169 WFNLGHAD-----HILPIIAGLTYFIQMKVSQSNGT----------SPEQVQMLKIQGI---MMPAMILFMSFAApSALV 230
|
250 260
....*....|....*....|...
gi 1088626578 436 LYWIFGNIYSLGQTLVNRKLNEK 458
Cdd:PRK01622 231 LYWITGGLFLMGQTIVLRKVMER 253
|
|
| 5TM_YidC_Alb3 |
cd20070 |
Five transmembrane core domain of membrane protein insertase YidC, Alb3, and similar proteins; ... |
248-454 |
7.72e-40 |
|
Five transmembrane core domain of membrane protein insertase YidC, Alb3, and similar proteins; This group is composed of the bacterial and chloroplastic members of the YidC/Oxa1/Alb3 protein family of insertases, including bacterial YidC, and chloroplastic ALBINO3 (Alb3) and Alb3-like proteins such as ALBINO3-like protein 1 (also called Alb4). Membrane protein insertase YidC, also called foldase YidC or membrane integrase YidC, facilitates proper folding, insertion, and assembly of inner membrane proteins and complexes. Depending on the nature of the substrate, YidC functions in a Sec-independent (YidC only) or a Sec-dependent manner as part of a complex containing YidC, the SecYEG channel, and SecDFYajC. YidC from Gram-negative bacteria contains an extra transmembrane segment (TM1) at the N-terminus and a large periplasmic domain, located between TM1 and TM2, that adopts a beta-super sandwich fold that is found in sugar-binding proteins such as galactose mutarotase. Alb3 and Alb3-like proteins are required for the post-translational insertion of the light-harvesting chlorophyll-binding proteins (LHCPs) into the chloroplast thylakoid membrane. Alb3 acts independently and may also function cooperatively with the thylakoid cpSecYE translocase to insert proteins co-translationally into the thylakoid membrane, similar to bacterial YidC that can function with the SecYEG translocase. YidC/Oxa1/Alb3 family insertases contain a core domain of five transmembrane (5TM) segments that is essential to insertase function.
Pssm-ID: 410994 [Multi-domain] Cd Length: 181 Bit Score: 141.36 E-value: 7.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 248 LGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGIN-VMGCLMPFLQM 326
Cdd:cd20070 2 LAIILLTILIRLLLLPLTLKQYKSMKKMQELQPKIKEIQEKYK--DDK---QKLQQEMMKLYKEHGVNpLGGCLPLLIQM 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 327 PIFIAMYGVVRRititggmyTENVANTNFLGINLANTQDGIIGIvLAGLVGATMFILQKISMKKPSytkntakhnpnpqa 406
Cdd:cd20070 77 PIFIALYQVLRN--------SIELRGAPFLWWILDLSAPDPYYI-LPILMGVTMFLQQKLTPTPTD-------------- 133
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1088626578 407 aQTEKTMKFVSYFMVIMMAFASYQSNA-LALYWIFGNIYSLGQTLVNRK 454
Cdd:cd20070 134 -DQAPQQKMMMYFMPVMFTFIFLSFPSgLVLYWLVSNLFSIIQQLIINK 181
|
|
| 60KD_IMP |
pfam02096 |
60Kd inner membrane protein; |
246-454 |
4.16e-38 |
|
60Kd inner membrane protein;
Pssm-ID: 460443 [Multi-domain] Cd Length: 187 Bit Score: 137.22 E-value: 4.16e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 246 FALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGINVM-GCLMPFL 324
Cdd:pfam02096 1 YGLAIILLTILIKLILFPLTYKQYKSMAKMQELQPEMKEIQEKYK--DDR---QKLQQEMMKLYKKEGVNPLgGCLPMLI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 325 QMPIFIAMYGVVRRITITGGmytenvANTNFLGINLANT--QDGIIGIVLAGLVGATMFILQKISMKkpsytkntakhnP 402
Cdd:pfam02096 76 QMPIFIALYRVLRNSIELRH------APFFLWIADLSAPdpISILHYYILPILMGVTMFLQQKLTPA------------P 137
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1088626578 403 NPQAAQTEKTMkfvSYFMVIMMAFASYQSNA-LALYWIFGNIYSLGQTLVNRK 454
Cdd:pfam02096 138 QDQPPQMKMMM---LYFMPLMFLFFFLNFPAgLVLYWVVSNLLSIGQQLIINR 187
|
|
| yidC_oxa1_cterm |
TIGR03592 |
membrane protein insertase, YidC/Oxa1 family, C-terminal domain; This model describes ... |
245-451 |
2.74e-37 |
|
membrane protein insertase, YidC/Oxa1 family, C-terminal domain; This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274665 [Multi-domain] Cd Length: 179 Bit Score: 134.53 E-value: 2.74e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 245 SFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPqsqQQMQMEMMAIYKKHGIN-VMGCLMPF 323
Cdd:TIGR03592 1 NWGLAIILLTIIVRLILLPLTLKQYKSMRKMQELQPKLKEIQEKYK--EDP---QKLQQEMMKLYKEEGVNpLGGCLPLL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 324 LQMPIFIAMYGVVRRititggmyTENVANTNFLGI-NLAnTQDGIigIVLAGLVGATMFILQKISMKKPSytkntakhnp 402
Cdd:TIGR03592 76 IQMPIFIALYQVLLR--------SIELRHAPFLWIiDLS-SPDPY--YILPILMGVTMFLQQKLSPKGPP---------- 134
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1088626578 403 npqaaqTEKTMKFVSYFMVIMMAFASYQ-SNALALYWIFGNIYSLGQTLV 451
Cdd:TIGR03592 135 ------DPAQQKMMMYFMPLMFLFFFLSfPAGLVLYWVVSNLFTIIQQLI 178
|
|
| PRK02944 |
PRK02944 |
YidC family membrane integrase SpoIIIJ; |
213-451 |
9.19e-33 |
|
YidC family membrane integrase SpoIIIJ;
Pssm-ID: 179508 Cd Length: 255 Bit Score: 124.88 E-value: 9.19e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 213 KPITTGDASFFDWILVIPVAWLMSFFGGILGNSFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYATr 292
Cdd:PRK02944 26 QPITPKSTGFWNEYFVYPLSQLITYFANLFGSNYGLAIIVVTLLIRLLILPLMIKQTKSTKAMQALQPEMQKLKEKYSS- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 293 KDPQSQQQMQMEMMAIYKKHGINVM-GCLMPFLQMPIFIAMYGVVrrititggMYTENVANTNFLGINLANTQDGIIGIV 371
Cdd:PRK02944 105 KDQATQQKLQQEMMQLFQKNGVNPLaGCLPIFIQMPILIAFYHAI--------MRTSEISKHSFLWFDLGQADPYYILPI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 372 LAGLvgaTMFILQKISMkkpsytKNTAKHNPNpqaaqtektMKFVSYFMVIM-MAFASYQSNALALYWIFGNIYSLGQTL 450
Cdd:PRK02944 177 VAGI---TTFIQQKLMM------AGTAGQNPQ---------MAMMLWLMPIMiLIFAINFPAALSLYWVVGNIFMIAQTY 238
|
.
gi 1088626578 451 V 451
Cdd:PRK02944 239 L 239
|
|
| PRK01318 |
PRK01318 |
membrane protein insertase; Provisional |
225-467 |
1.04e-28 |
|
membrane protein insertase; Provisional
Pssm-ID: 234942 [Multi-domain] Cd Length: 521 Bit Score: 118.44 E-value: 1.04e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 225 WILVIPVAWLMSFFGGILGNsFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDPQSQQQMQMe 304
Cdd:PRK01318 303 WFITKPLFWLLDFLHSFVGN-WGWAIILLTIIVKLLLFPLTYKSYVSMAKMKVLQPKMQELKEKYK--DDPQKMQQEMM- 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 305 mmAIYKKHGINVM-GCLMPFLQMPIFIAMYGVVrrititggmyteNVA----NTNFLG-IN-LAnTQDG--IIGI-VLAG 374
Cdd:PRK01318 379 --ELYKKEKVNPLgGCLPILIQIPIFFALYKVL------------LVSielrHAPFIGwIHdLS-APDPyfILHIgLLPI 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 375 LVGATMFILQKIsmkkpsytkntakhNPNPQAAQTEKTMKFVSY-FMVIMMAFASyqsnALALYWIFGNIYSLGQTLVNR 453
Cdd:PRK01318 444 LMGITMFLQQKL--------------NPTPTDPMQAKIMKFMPLiFTFFFLSFPA----GLVLYWIVNNLLTIIQQYLIN 505
|
250
....*....|....
gi 1088626578 454 KLNEKKHEHLMQKQ 467
Cdd:PRK01318 506 RRLEKKKLLAANKK 519
|
|
| PRK00145 |
PRK00145 |
putative inner membrane protein translocase component YidC; Provisional |
243-461 |
3.57e-27 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 234665 [Multi-domain] Cd Length: 223 Bit Score: 108.67 E-value: 3.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 243 GNSFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYatRKDPQSQQQMQMEmmaIYKKHGINVM-GCLM 321
Cdd:PRK00145 28 NFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNEIQPEIKKLQAKY--KNDPQKLQQEMMK---LYKEKGVNPLgGCLP 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 322 PFLQMPIFIAMYGVVRRITitggmyteNVANTNFLGI-NLANTQdgiIGIVLAGLVGATMFIlqkismkkPSYTKNTAKh 400
Cdd:PRK00145 103 LLIQWPILIALYYVFNNLT--------GINGVSFLWIkDLAKPD---ITWILPILSGATTYL--------SGYLMTKAD- 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1088626578 401 npNPQAAQTeKTMkfvSYFMVIMMAFASYQ-SNALALYWIFGNIYSLGQTLVNRKLNEKKHE 461
Cdd:PRK00145 163 --SSQAGQM-KTM---NIGMSIFMGVMSWKfKSALVLYWVIGNLIQIIQTYFIKKLELKKKV 218
|
|
| PRK02463 |
PRK02463 |
OxaA-like protein precursor; Provisional |
217-451 |
2.45e-25 |
|
OxaA-like protein precursor; Provisional
Pssm-ID: 235040 Cd Length: 307 Bit Score: 105.58 E-value: 2.45e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 217 TGDASFFDW-ILVIPVAWLMSFFGGILGNSFALGILFTTIVVRTLAWP--IYA--KSNDLSIKMNVAQPDMQRVQAKYAT 291
Cdd:PRK02463 30 HGNPTGFIWnFLGAPMSYFIDYFANNLGLGFGLAIIIVTIIVRLIILPlgLYQswKATYQSEKMAYLKPVFEPINERLKN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 292 RKDPQSQQQMQMEMMAIYKKHGINV---MGCLMPFLQMPIFIAMYGVVRrititggmYTENVANTNFLGINLantqdGII 368
Cdd:PRK02463 110 ATTQEEKMAAQTELMAAQRENGISMlggIGCLPLLIQMPFFSALYFAAQ--------YTKGVSTSTFLGIDL-----GSP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 369 GIVLAGLVGATMFILQKISMKKPsytkntakhnPNPQAAQTEKTMkfvsYFMVIMMAFASYQSNA-LALYWIFGNIYSLG 447
Cdd:PRK02463 177 SLVLTAIIGVLYFFQSWLSMMGV----------PEEQREQMKAMM----YMMPIMMVVFSFSSPAgVGLYWLVGGFFSII 242
|
....
gi 1088626578 448 QTLV 451
Cdd:PRK02463 243 QQLI 246
|
|
| 5TM_Oxa1-like |
cd20069 |
Five transmembrane core domain of mitochondrial inner membrane protein Oxa1 and similar ... |
250-451 |
2.58e-21 |
|
Five transmembrane core domain of mitochondrial inner membrane protein Oxa1 and similar proteins; This group is composed mostly of the mitochondrial members of the YidC/Oxa1/Alb3 protein family of insertases, including mitochondrial inner membrane proteins Oxa1, Oxa1-like (Oxa1L), cytochrome c oxidase assembly protein 18 (Cox18, also called Oxa2), and Arabidopsis thaliana mitochondrial ALBINO3-like protein 3 (ALB33). It also includes Arabidopsis thaliana chloroplastic ALBINO3-like protein 2 (ALB32). Members of this group mediate the insertion of both mitochondrion-encoded precursors and nuclear-encoded proteins from the matrix into the mitochondrial inner membrane. Oxa1 and Cox18/Oxa2 are essential for the activity and assembly of cytochrome c oxidase, playing central roles in the translocation and export of the N-terminal and C-terminal parts, respectively, of the COX2 protein into the mitochondrial intermembrane space. ALB32 may be involved in the insertion of integral membrane proteins into the chloroplast thylakoid membranes. YidC/Oxa1/Alb3 family insertases contain a core domain of five transmembrane (5TM) segments that is essential to insertase function.
Pssm-ID: 410993 [Multi-domain] Cd Length: 201 Bit Score: 91.43 E-value: 2.58e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 250 ILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYATRK---DPQSQQQMQMEMMAIYKKHGIN-VMGCLMPFLQ 325
Cdd:cd20069 8 IAATTVALRLLLLPLVIKSQRNAARMANLQPELQKLQEKLKEARasgDQLEAAEARKELKELMKKHNVNpLKSLLLPLVQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 326 MPIFIAMYGVVRRITI-------TGGMY--TenvantnflgiNLAnTQDGiiGIVLAGLVGATMFILQKISMKKPSytkn 396
Cdd:cd20069 88 APVFISFFFALRKMANlpvpsfkTGGLLwfT-----------DLT-VPDP--YYILPILTSLTFLATIELGAETGT---- 149
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1088626578 397 takhnpnpQAAQTEKTMKFVSYFM-VIMMAFASYQSNALALYWIFGNIYSLGQTLV 451
Cdd:cd20069 150 --------SGSPQSKTMKNVFRGLpVLMIPFTANFPSAVFLYWITSNLFSLAQNLL 197
|
|
| PRK01315 |
PRK01315 |
putative inner membrane protein translocase component YidC; Provisional |
220-451 |
1.48e-19 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 234941 Cd Length: 329 Bit Score: 89.41 E-value: 1.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 220 ASFFDWILViPVAWLMS------------FFGGILGNSFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQA 287
Cdd:PRK01315 5 ADFGSAIMT-PLYWVISgilvlfhtllgfLFGPDSGLTWVLSIVGLVIVIRALLIPLFVKQIKSQRNMQEIQPKMKKIQE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 288 KYATRKDpqsqqQMQMEMMAIYKKHGIN-VMGCLMPFLQMPIFIAMYGVV-----RRIT---ITGGMyTENVANTNFLGI 358
Cdd:PRK01315 84 KYKGDRE-----RMSQEMMKLYKETGTNpLSSCLPLLLQMPIFFALYRVLdsaasRGDGigpINPPL-LESFRHAHIFGA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 359 NLA-----NTQDG-----IIGIVLAGLVGATMFILQKISMkkpsyTKNTAKHNPNPQAAQTEKTMKFVSYFMVIMMAFAS 428
Cdd:PRK01315 158 PLAatflqALNAGntavqVVAAVLIILMSASQFITQLQLM-----TKNMPPEAKTGPMAQQQKMLLYLFPLMFLVSGIAF 232
|
250 260
....*....|....*....|...
gi 1088626578 429 yqSNALALYWIFGNIYSLGQTLV 451
Cdd:PRK01315 233 --PVGVLFYWLTSNVWTMGQQFY 253
|
|
| 5TM_YidC_Oxa1_Alb3 |
cd19751 |
Five transmembrane core domain of YidC/Oxa1/Alb3 protein family of insertases; The YidC/Oxa1 ... |
248-451 |
5.35e-19 |
|
Five transmembrane core domain of YidC/Oxa1/Alb3 protein family of insertases; The YidC/Oxa1/Alb3 protein family of insertases facilitate the insertion, folding and assembly of proteins of the inner membranes of bacteria and mitochondria, and the thylakoid membrane of plastids. Members include bacterial YidC, mitochondrial Cox18 and Oxa1, and chloroplastic Alb3 and Alb4. Membrane protein insertase YidC, also called foldase YidC or membrane integrase YidC, facilitates proper folding, insertion, and assembly of inner membrane proteins and complexes. Oxa1 and Cox18/Oxa2 mediate the insertion of both mitochondrion-encoded precursors and nuclear-encoded proteins from the matrix into the mitochondrial inner membrane. Alb3 and Alb3-like proteins, including Alb4, are required for the post-translational insertion of the light-harvesting chlorophyll-binding proteins (LHCPs) into the chloroplast thylakoid membrane. YidC/Oxa1/Alb3 family insertases contain a core domain of five transmembrane (5TM) segments that is essential to insertase function.
Pssm-ID: 410992 [Multi-domain] Cd Length: 189 Bit Score: 84.53 E-value: 5.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 248 LGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYATRK-DPQSQQQMQMEMMAIYKKHGINVM-GCLMPFLQ 325
Cdd:cd19751 2 LSIIIVTILIRLALLPLTLKQQKSMRKMQVIRPEMEAIREKYKEKAsKDKVQQEMQKEMLGLYKKHGVNPMaGCLPLFIQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 326 MPIFIAMYGVVRRititggmyTENVANTNFLGINLANTQDGIigIVLAGLVGATMFILQKISMkkpsytknTAKHNPNPQ 405
Cdd:cd19751 82 LPIFMAFYFAIMR--------TEEIRYHTFLWFFDLGQPDYL--YILPFVAGITTYFQFKMTM--------SHQQQMQMM 143
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1088626578 406 AAQTEKTMKFVSYFMVIM-MAFASyqsnALALYWIFGNIYSLGQTLV 451
Cdd:cd19751 144 QMQMKVMLYVMPVMIIIAgLSFPS----ALSLYWIISNLFMIIQTYF 186
|
|
| PRK03449 |
PRK03449 |
putative inner membrane protein translocase component YidC; Provisional |
230-466 |
1.66e-17 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 179580 Cd Length: 304 Bit Score: 82.81 E-value: 1.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 230 PVAWLMSF----FGGILGNS----FALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAtrKDpqsQQQM 301
Cdd:PRK03449 8 PVSAILWFwhklFSFVLGPDngfaWALSVMFLVFTLRALLYKPFVRQIRTTRKMQELQPQIKALQKKYG--ND---RQKM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 302 QMEMMAIYKKHGIN-VMGCLMPFLQMPIFIAMYGVVRRITITG------GMYTENVANT-----------NFLGINL--- 360
Cdd:PRK03449 83 ALEMQKLQKEHGFNpILGCLPMLAQIPVFLGLFHVLRSFNRTGtgfgqlGMSVEENRNTpnyvfsaedvqSFLDARLfga 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 361 --------------ANTQDGIIGIVlagLVGATMFILQKISM---KKPSYTKNTAKHNPNPQAAQTEKTMKFVSYFMVIM 423
Cdd:PRK03449 163 plsayitmprsgldAFVDFTRTNII---LVGVPLMIIAGVAThfnSRASVARQSAEAAANPQTAMMNKLALWVFPLGVLV 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1088626578 424 MAFasYQSNALALYWIFGNIYSLGQT-LVNRKLN----EKKHEHLMQK 466
Cdd:PRK03449 240 GGP--FLPLAILLYWVSNNIWTFGQQhYVFGKIDkeeeAKKQAKAERR 285
|
|
| PRK02201 |
PRK02201 |
putative inner membrane protein translocase component YidC; Provisional |
185-450 |
1.05e-16 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 235012 Cd Length: 357 Bit Score: 81.21 E-value: 1.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 185 NKYGYDVTYTHEGTTVAKTfevyvaggekPITTGDASFFDWIlVIPVAWLMSFF------GGILGNSFALGILFTTIVVR 258
Cdd:PRK02201 77 NNYRYLFISSNTGPYNPIT----------SWTWKYGPFYGLF-VYPIAQIILSImasqslSELYGWSTILAIIVVVLIIR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 259 TLAWPIYAKSNDLSIKMNVAQPDMQRVQAKYAT-RKDPQSQQQMQMEMMAIYKKHGINVMGCLMP-FLQMPIFIAMYGVV 336
Cdd:PRK02201 146 LISFLITFKSTFNQEKQEELQGKKAKIDAKYKDyKKDKQMKQRKQQEIQELYKKHNISPFSPFVQmFVTLPIFIAVYRVV 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 337 RRititggmyTENVANTNFLGINLANT----------QDGIIGIVLAGLVGATMFILQKISMKKPSYTKNTAKhnpnpQA 406
Cdd:PRK02201 226 QS--------LPSIKVTTWLGIDLSATswqeifagnwIYLPILIIVVPVQALSQLLPQILNKKKNKERTLNVK-----EK 292
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1088626578 407 AQTEKTMKFVSYFMVIMMAFASYQSNALALYWIFGNIYSLGQTL 450
Cdd:PRK02201 293 EALKKQNKTQNIISIVFIFFGVIFAAGVQIYWIIGGIWTILQTL 336
|
|
| PRK01001 |
PRK01001 |
putative inner membrane protein translocase component YidC; Provisional |
211-467 |
7.26e-12 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 234887 [Multi-domain] Cd Length: 795 Bit Score: 67.90 E-value: 7.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 211 GEKPITTGDASFFDWILVI--PVAWL----MSFFGgILGNSFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQR 284
Cdd:PRK01001 536 GENPEYLDSITFRGFFSFItePFAALlfiiMKFFK-FLTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQE 614
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 285 VQAKYatRKDPQSQQQMQMemmAIYKKHGIN-VMGCLMPFLQMPIFIAMYGVVRRITITGGM-----YTENVANTNFL-- 356
Cdd:PRK01001 615 IQQKY--KKEPKRAQMEIM---ALYKTNKVNpITGCLPLLIQLPFLIAMFDLLKSSFLLRGAsfipgWIDNLTAPDVLfs 689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 357 ---GINLANTQDGIIGIvlagLVGATMFILQKISMKKPSytkntakhNPNPQAAQTEKTMkfvSYFMVIMMAFASYQ-SN 432
Cdd:PRK01001 690 wetPIWFIGNEFHLLPI----LLGVVMFAQQKISSLKRK--------GPVTDQQRQQEAM---GTMMALLFTFMFYNfPS 754
|
250 260 270
....*....|....*....|....*....|....*...
gi 1088626578 433 ALALYWIFGNIYSLGQT-LVNRKLNEK--KHEHLMQKQ 467
Cdd:PRK01001 755 GLNIYWLSSMLLGVIQQwVTNKILDSKhlKNEVVPNKK 792
|
|
| PRK02654 |
PRK02654 |
putative inner membrane protein translocase component YidC; Provisional |
227-337 |
2.68e-09 |
|
putative inner membrane protein translocase component YidC; Provisional
Pssm-ID: 235058 Cd Length: 375 Bit Score: 58.84 E-value: 2.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 227 LVIPVawlMSFFGGILgNSFALGILFTTIVVRTLAWPIYAKSNDLSIKMNVAQPDMQR----VQAKYAtrKDPQSQQQMQ 302
Cdd:PRK02654 12 VMLPI---LDFFYGIV-PSYGLAIVALTLVIRFALYPLSAGSIRNMRRMKIAQPVMQKrqaeIQERYK--NDPQKQQEEM 85
|
90 100 110
....*....|....*....|....*....|....*
gi 1088626578 303 MEmmaIYKKHGINVMGCLMPFLQMPIFIAMYGVVR 337
Cdd:PRK02654 86 GK---LMKEFGNPLAGCLPLLVQMPILFALFATLR 117
|
|
| PRK00247 |
PRK00247 |
putative inner membrane protein translocase component YidC; Validated |
232-460 |
1.01e-08 |
|
putative inner membrane protein translocase component YidC; Validated
Pssm-ID: 178945 [Multi-domain] Cd Length: 429 Bit Score: 57.17 E-value: 1.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 232 AWLMSFFGgilgnsfalgiLFTTI--VVRTLAWPIYaKSNDLSIKMnvaQPDMQRVQAKYATRKDPQSQQQMQMEMMAIY 309
Cdd:PRK00247 31 AWFASLFG-----------LVITVraIIAPFTWQQY-KSGRTAAHI---RPKRKALREEYKGKTDEASIRELQQKQKDLN 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 310 KKHGINVM-GCLMPFLQMPIFIAMYGVVRRIT-ITGGMYTENVANTNFLGIN---------------------------- 359
Cdd:PRK00247 96 KEYGYNPLaGCVPALIQIPVFLGLYQVLLRMArPEGGLENPVHQPIGFLTSEevesflqgrvfnvplpayvsmpaeqlay 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1088626578 360 LANTQDGIIGIVLAGLVGATMFILqkISMKKPSYTKNTAKHNPNPQAAQTEK---TMKFVSYFMVIMMAFASYQSNALAL 436
Cdd:PRK00247 176 LGTTQATVLAFVLPLFIAAAVFTA--INMAMSTYRSFQTNDHDSGFAVGMLKfliVMAILAPIFPLSLGLTGPFPTAIAL 253
|
250 260
....*....|....*....|....
gi 1088626578 437 YWIFGNIYSLGQTLVNRKLNEKKH 460
Cdd:PRK00247 254 YWVANNLWTLIQNIIMYLILERKY 277
|
|
| Big_3 |
pfam07523 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
137-208 |
3.35e-03 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
Pssm-ID: 400072 [Multi-domain] Cd Length: 67 Bit Score: 36.12 E-value: 3.35e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1088626578 137 QIGESFDPTGIKIYAVQRDGDITVlngedvaeSFDDggYEPLGDDGFHNKYGYDVTYTHEGttVAKTFEVYV 208
Cdd:pfam07523 8 YVGDSWDAEDNFVSATYKDGDAEV--------PFDD--VEVSGTVDSTKAGEYTVTYTYKG--VSATFTVTV 67
|
|
| |
