|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 790.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 81 QHHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 161 LVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 241 YGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 108742982 401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 623.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 81 QHHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 161 LVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 241 YGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 108742982 401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 580.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 81 QHHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 161 LVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 241 YGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 108742982 401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
9.43e-179 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 507.96 E-value: 9.43e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLL-NQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 80 SQHHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 160 LLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 240 GYGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 320 GLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 108742982 400 MLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGLT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
3.97e-159 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 457.86 E-value: 3.97e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 3 KIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTL-PLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLlWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 82 HHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 162 VALIYVQKSLGSLNYLVMNMwsqDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 242 GMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 322 TSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 108742982 402 ITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.05e-154 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 446.73 E-value: 1.05e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLL-NQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 80 SQHHLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 160 LLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 240 GYGMLRLTMILN-PTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGF 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 108742982 399 NMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
1.69e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 348.68 E-value: 1.69e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSsmiWINMTSYSLMISLMTLPLLNQtESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 81 QhhLTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 161 LVALIYVQKSLGSLNYLVMNMWSqdmsslWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFFG------SLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 241 YGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 108742982 401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-457 |
1.35e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 342.97 E-value: 1.35e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 37 MTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHhlTKESLMRKKLYLSMLIFLQMFLIMTFTATELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 117 LFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSlwsSNLLW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSS---MGLWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 197 LACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 277 LRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMA 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 357 TWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
410 420
....*....|....*....|.
gi 108742982 437 MSMHMLPLIMLTFNPKIIMGL 457
Cdd:MTH00150 396 LLLHWVPLLLLILKSDLLFMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
3.86e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 317.45 E-value: 3.86e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSmIWINMTSYSLMISLMTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 81 QHhlTKESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00014 80 FK--IFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 161 LVALIYVQKSLGSLNYLVMNMWSqdmSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 241 YGMLRLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 321 LTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 108742982 401 LITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKII 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-455 |
7.46e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 316.54 E-value: 7.46e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 5 IMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHL 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 85 TKESlmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVAL 164
Cdd:MTH00205 82 KSNK--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 165 IYVQKSLGSLNylvMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGML 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 245 RLTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 325 MLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNMLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 108742982 405 LYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
5.85e-85 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 268.87 E-value: 5.85e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHHLTKeslmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVqkslgslnYLVMNMWSQDMSSL-------WSSNLLWLACIMAFMVKMPLYG 211
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILAL--------YFLAGALTFDIAELaaaplplTAQLLLFLAFFIAFAVKVPMFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:COG1008 228 FHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 291 VSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALP 370
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 371 PFINLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFN 450
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLY 467
|
....*...
gi 108742982 451 PKIIMGLT 458
Cdd:COG1008 468 PQPLLDLI 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.48e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 244.46 E-value: 1.48e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHHLTKeslmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QTeRLNAGLYFLFYTLIGSLPLLVALIY-VQKSLGSLNYLVMNmwSQDMSSLWSSnLLWLACIMAFMVKMPLYGLHLWLP 217
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGlYFLGGGTFDLLELL--NLPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTWLP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:TIGR01972 228 DAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:TIGR01972 308 VLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 377 GELFVIMASFSWSNFTIIITGFNMLITALYSLYMLTMTQRGKFTYHIHNIKPS-YTRENTLMSMHMLPLIMLTFNPKIIM 455
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDlNGREIAVLAPLVVLILFLGLYPNPLL 467
|
....
gi 108742982 456 GLTY 459
Cdd:TIGR01972 468 DLTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-454 |
2.66e-75 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 244.34 E-value: 2.66e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHHLTKeslmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QTERLNAGLYFLFYTLIGSLPLLVALIYV----QKSLGSLNYLVmnmWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAD---LLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNP-TTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 294 MALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 374 NLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIMLTFNPKI 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
.
gi 108742982 454 I 454
Cdd:PRK05846 473 L 473
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-410 |
1.65e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 223.40 E-value: 1.65e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 53 SLTFFSDSLSSPLLMLTVWLLPLMIMASQH---HLTKESLMrkklylsMLIFLQMFLIMTFTATELILFYILFESTLIPT 129
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKEFLL-------CLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 130 LIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNY-LVMNMWSQDMSSLWssnlLWLACIMAFMVKMP 208
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYqILLNIKLPLSIQKW----LLVGFFLSLAVKIP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 209 LYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFI-MLCLWGMIMTSSICLRQTDLKSLIA 287
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIvMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 288 YSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNL 367
Cdd:MTH00204 305 YSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 108742982 368 ALPPFINLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYM 410
Cdd:MTH00204 385 GFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
53-410 |
2.73e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 223.01 E-value: 2.73e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 53 SLTFFSDSLSSPLLMLTVWLLPLMIMASQH---HLTKESLMRkklylsmLIFLQMFLIMTFTATELILFYILFESTLIPT 129
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISWNsikFLIKEFLLC-------LLVIEILLMGVFTILDLVGFYILFEGILIPM 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 130 LIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYlvMNMWSQDMSSLWSsNLLWLACIMAFMVKMPL 209
Cdd:MTH00217 146 FLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY--QALCCLKIEKELQ-YFIFLGFFLSLAIKIPK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIM-LCLWGMIMTSSICLRQTDLKSLIAY 288
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 289 SSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLA 368
Cdd:MTH00217 303 SSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANAS 382
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 108742982 369 LPPFINLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYM 410
Cdd:MTH00217 383 IPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
2.04e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 206.78 E-value: 2.04e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 112 ATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSLWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 192 SNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIMLCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQA 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 108742982 351 FLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGF 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-409 |
1.07e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 205.93 E-value: 1.07e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 54 LTFFSDSLSSPLLMLTVWLLPLMIMASQHHLtkeSLMRKKLYLSMLIfLQMFLIMTFTATELILFYILFESTLIPTLIII 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSV---KYLTKSFLICMLI-LEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 134 TRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMnMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLH 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL-ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTM-ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 293 HMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPF 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 108742982 373 INLIGELFVIMASFSWSNFTIIITGFNMLITALYSLY 409
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-457 |
3.00e-45 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 164.43 E-value: 3.00e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHHLTKeslmrKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASWKVTRK-----PRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSsLWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYP-LALELLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYP-FIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 298 IVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 378 ELFVIMASFSWSNF-------TIIITGFNMLITALYSLYMLTMTQRGKFTYHIH------NIKPsytRENTLMSMHMLPL 444
Cdd:PRK12561 371 ELTVFLGITSSDVYsstfrtiTILLAAVGLILTPIYLLSMLRRVFYGPRSELLPalavveDAKP---RELFIALSLLVPI 447
|
410
....*....|...
gi 108742982 445 IMLTFNPKIIMGL 457
Cdd:PRK12561 448 IGIGFYPKLATQL 460
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
84-447 |
7.36e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.53 E-value: 7.36e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 84 LTKESLMRKKLYLSMLIFLQMFLIMTFTateLILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVA 163
Cdd:MTH00094 56 LLSEKNFNLLILSNLLILICLLFFVSSN---MLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFV 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 164 LIYVQKSLgSLNYLVMNMwsqdmsslwsSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM 243
Cdd:MTH00094 133 YLKNFFFF-SLCYFDFFL----------SWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGF 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 244 LRltmILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTS 323
Cdd:MTH00094 202 LR---ILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 324 SMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNMLIT 403
Cdd:MTH00094 279 TLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVS 358
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 108742982 404 ALYSLYMLTMTQRGKFTYHIHNIKPSYTRENTLMSMHMLPLIML 447
Cdd:MTH00094 359 FYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-430 |
1.96e-43 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 159.48 E-value: 1.96e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQhhltkESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSsLWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLP-LSTQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFimLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 296 LVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QAFLPLMATWWLLASLTNLALPPF 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108742982 373 INLIGELFVIMASFswsNFTIIITGFNMLITALYSLYMLTMTQR---GKFTYHIHNIKPSY 430
Cdd:PRK06473 389 VGFIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNRvffGRLTAELSNLPRVL 446
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-409 |
3.56e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 157.23 E-value: 3.56e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESlmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 132 IITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSnLLWLACIMAFMVKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 212 LHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIMLCLWG--MIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLltMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 290 SVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 108742982 370 PPFINLIGELFVIMASFSWSNFTIIITgfnMLITALYSLY 409
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLAAV---LLLSSLLTLA 420
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-454 |
4.29e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 139.46 E-value: 4.29e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 58 SDSLSSPLLMLTVWLLPLMIMASQhhltkESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 138 NQtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSsLWSSNLLWLACIMAFMVKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFG-LGFQLLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYP-FIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 297 VIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 377 GELFViMASFSWSN-----FTIIITGFNMLITALYSLYMLTM-------TQRGKFTYHiHNIKPSYTRENTLMSMHMLPL 444
Cdd:PRK02546 398 AELMV-FVGFATSDaytlpFRVVVVFLAAVGVILTPIYLLSMlreiffgPENKELVSH-EKLVDAEPREVFIIACLLVPI 475
|
410
....*....|
gi 108742982 445 IMLTFNPKII 454
Cdd:PRK02546 476 IGIGLYPKLV 485
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
59-457 |
1.24e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 137.77 E-value: 1.24e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHhLTKESlmrKKLYLSMLIflqMF--LIMTFTATELILFYILFESTLIPTLIIITRW 136
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAWP-VTRNS---RLFYFLMLA---MYsgQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 137 GNQtERLNAGLYFLFYTLIGSLPLLVALIYVqkSLGSLNYLVMNMWSQDMSS--LWSSNLLWLACIMAFMVKMPLYGLHL 214
Cdd:CHL00011 156 GGK-KRLYSATKFILYTAGGSIFLLIGVLGM--GLYGSNEPTLNFETLANQSypVALEILFYIGFLIAYAVKLPIIPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:CHL00011 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVgAIQIIYAASTSLGQRNLKKRIAYSSVSH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 294 MALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMLLAR--GLQAFLPLMATWWLLASLTNLALPP 371
Cdd:CHL00011 313 MGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPG 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 372 FINLIGELFV---IMASFSWS-NFTIIITGFNMLITALYSLYMLTMTQRGKFTYHIHNIKPSY-----TRENTLMSMHML 442
Cdd:CHL00011 391 MSGFVAELIVffgIITSQKYLlMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYffdsgPRELFISICILL 470
|
410
....*....|....*
gi 108742982 443 PLIMLTFNPKIIMGL 457
Cdd:CHL00011 471 PVIGIGIYPDFVLSL 485
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-418 |
2.28e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 134.45 E-value: 2.28e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQhhltkESLMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 139 QtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSsLWSSNLLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLS-LNTQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPfiMLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 296 LVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQA---FLPLMATWWLLASLTNLALPPF 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 108742982 373 INLIGELFVIMASFSWSNFTIIITGFNMLITALYSLYMLTMTQRGK 418
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-387 |
1.06e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.42 E-value: 1.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 53 SLTFFSDSLSSPLLMLT--VWLLPLMIMASQHHltkeslMRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTL 130
Cdd:PRK08375 70 GIELRADSLSALFLLVTsiLAIAALLYAIGYGE------HRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 131 IIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNylvMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLY 210
Cdd:PRK08375 144 ALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLN---MADLAGALAENPTVVTAFGFVLLALALKAAVF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTM----ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK08375 220 PLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 287 AYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTN 366
Cdd:PRK08375 300 AYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSL 379
|
330 340
....*....|....*....|.
gi 108742982 367 LALPPFINLIGELFVIMASFS 387
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
31-408 |
2.95e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.36 E-value: 2.95e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 31 SLMISLMTLPLLNQTESNSN-----------NFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESLmrKKLYLSML 99
Cdd:PRK12667 42 SLITLILSILLFIQVYSSNKpivylfggwpaPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 100 IFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLN---- 175
Cdd:PRK12667 120 LGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadl 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 176 -YLVMNMWSQDMSSL-----WSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRL--- 246
Cdd:PRK12667 200 sAKIRGLSFPLTGGLagnppLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlyt 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 247 ----TMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLT 322
Cdd:PRK12667 280 ifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIA 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 323 SSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSnftIIITGFNMLI 402
Cdd:PRK12667 360 KSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLI 436
|
....*.
gi 108742982 403 TALYSL 408
Cdd:PRK12667 437 ASAISL 442
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-447 |
2.20e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 93.46 E-value: 2.20e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTKIMAYPFIMLC--LWGMIMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 284 SLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 364 LTNLALPPFINLIGELFVIMASFS---WSNFTIIITGfnmLITALYSLYMltMTQRGKFTYHIHNIKPSYTRENTLMSMH 440
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLL---LTLAFAALVR--RVAGMVFGEPPEAVNRGDLGWLTTSPMF 461
|
....*..
gi 108742982 441 MLPLIML 447
Cdd:PRK06458 462 VHLVLVL 468
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
9.69e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 84.11 E-value: 9.69e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISLMTLPLLNQ-TESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNpSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 108742982 80 SQHHLTKESLMRKKLYLSMLIFLQMFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-395 |
1.19e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 87.67 E-value: 1.19e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 97 SMLIFLQM-FLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLN 175
Cdd:MTH00062 74 RFFLFLSLiFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 176 YlvmNMWSQDMSSLWSSNLLwlaCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPTTk 255
Cdd:MTH00062 154 F---SDWGSDDSVSLIVYYV---LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS- 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 256 IMAYPFIMLCLWGMIMTSSicLRQTDLKSLIAYSSVSHMaLVIVAILMQTPWSFMGATALM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 227 FLGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108742982 335 ERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIII 395
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
80-404 |
2.29e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.34 E-value: 2.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 80 SQHHLTKESLmrkKLYLSMLIFLQMFLIMTFTATELILFYILFE-STLIPTLIIITRwgNQTERLNAGLYFLFYTLIGSL 158
Cdd:PRK08676 92 SNGELDPENL---KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMI 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 159 PLLVALIYV------QKSLGSLNYLVMnmwsQDMSSLWSSNLLWLACIM---AFMVKMPLYGLHLWLPKAHVEAPIAGSM 229
Cdd:PRK08676 167 FAFIGLIFLfsltrqALGTGTLNWTEL----AAHASLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 230 VLAAVLLKLGGYGMLRLTMILNpTTKIMAYPFIMLCLWGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILMQTP 306
Cdd:PRK08676 243 LLSGTVLNIGIYGILRLSALLR-QSGAAEQFSNVLIGLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTP 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 307 WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASF 386
Cdd:PRK08676 322 LALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLG 401
|
330
....*....|....*...
gi 108742982 387 SWSNFTIIITGFNMLITA 404
Cdd:PRK08676 402 GISVWLVLAVLLLLLLAA 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
47-327 |
4.35e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 4.35e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 47 SNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESLMRKKLYLSMLIFLqmflIMTFTATELILFYILFESTL 126
Cdd:PRK08668 56 LFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGV----LGVFLANDLLTLYIFWEIMT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 127 IPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALIYVQKSLGSLNYL-VMNMWSQDMSSLWSsnLLWLACIMAFMV 205
Cdd:PRK08668 132 FSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFAdISQGLINDTSTGFA--LIVFLFLLAFGV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 206 -KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLrLTMILNPTTKIMA------------YPFIMLCLWGMIMT 272
Cdd:PRK08668 208 aKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKLFSefgtyrgvplfnYILAWLGNISIIVG 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 108742982 273 SSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-412 |
1.61e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 79.00 E-value: 1.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESLMRKKLYLSMLIFLQMF-LIMTFTATELILFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSslwssnLLWLACIMAFMVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR-LTMILNPTtkiMAYPFIMLCLwGMI---MTSSICLRQTDLKSLI 286
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSPE---LWWGVLILLA-GSIsalLGVIYALKEHDLKGLL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 287 AYSSVSHMALVIVAILMQTPWSFMGATALM-----------IAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLM 355
Cdd:PRK08667 299 AYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYT 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 108742982 356 ATWWLLASLTNLALPPFINLIGELFVIMASFswSNFTIIITGFNMLITALYSLYMLT 412
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALT 433
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-409 |
2.44e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 78.09 E-value: 2.44e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 100 IFLQMFLI------MTFTATELILFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGS 173
Cdd:PRK12665 112 IFLPTYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 174 LNYLVMNMWSQDMSSlWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNPT 253
Cdd:PRK12665 191 LNMADLAVRLDELPS-GTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 254 TKIMAypFIMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFcLANS 332
Cdd:PRK12665 270 GGLDT--LLMVVaLLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 333 NYERiHSRTMLLAR--GLQAFLPLMATWWLLASLtNLA-LPPFINLIGELFVIMA---SFSWSNFTIIITGfnmLITALY 406
Cdd:PRK12665 347 LIER-QAGSSSLRRlgGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgaeDGTWLAWALVAGG---VVTSLL 421
|
...
gi 108742982 407 SLY 409
Cdd:PRK12665 422 TLY 424
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
95-431 |
1.65e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 75.57 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 95 YLSMLIFLQMFLIMtftATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSL 174
Cdd:COG1009 116 YLLLFMAAMLGLVL---SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 175 NYLVMNMWSQdmsSLWSSNLLWLACIMAF---MVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTMIL 250
Cdd:COG1009 193 NFSELLAAAP---TILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 251 NPTTkiMAYPFIMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQtpwSFMGATALMIAHGLTSSMLFCL 329
Cdd:COG1009 269 ALSP--VWLTVVAIIgAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLG 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 330 ANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNML---ITALY 406
Cdd:COG1009 344 AGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFY 423
|
330 340
....*....|....*....|....*....
gi 108742982 407 SLYMLTMT----QRGKFTYHIHNIKPSYT 431
Cdd:COG1009 424 SFRLFFLVffgkPRPKTPKHPHESPWLMT 452
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-339 |
9.14e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 73.06 E-value: 9.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 101 FLQMFLIM-------TFTATELILFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGS 173
Cdd:PRK07234 95 FFYAQLLIlhgsvnaAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 174 LnylvmnmwsqDMSSLWSSNLLWLACI-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNP 252
Cdd:PRK07234 174 F----------AFSGLATADPEAFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPG 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 253 TTKIMAYPFIMLCLWGmimtSSICLRQTDLKSLIAYSSVSHMALVIVAILMqtpwsfmgATALMIAHGLTSSMLFCLANS 332
Cdd:PRK07234 244 LDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGA 311
|
....*..
gi 108742982 333 NYERIHS 339
Cdd:PRK07234 312 LPSRNFT 318
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-395 |
2.82e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.72 E-value: 2.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 104 MFLIMTFTATELIL------FYILFESTLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYL 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 178 VMNMWSQDMSSLWSSNLLWLaCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMIL---NPTT 254
Cdd:PRK08377 192 HIAQLAGTIDPTVAQVGLAL-LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMqnaNGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 255 KIMAYPFIMLCLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNY 334
Cdd:PRK08377 271 SVLKLVIIMATL-TVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVG 349
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108742982 335 ERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIII 395
Cdd:PRK08377 350 ITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVA 410
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
91-401 |
9.08e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 70.00 E-value: 9.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 91 RKKLYLSMLIFLQMFLIMTFTATELILFyILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIYVQKS 170
Cdd:PRK06525 112 TGRYYAFLLLFIGAMAGLVYSSTLLGLL-LFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQ 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 171 LGSLNYLVMNMWSQDMSSLwssnlLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTMI 249
Cdd:PRK06525 190 TGTFALSALSGLHGSLKYL-----VFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQS 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 250 LNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI---LMQTPWSFMGATALMIAHGLTSSML 326
Cdd:PRK06525 264 MGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslaILGSRLALEGSIAYIFNHAFAKSLF 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108742982 327 FCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTIIITGFNML 401
Cdd:PRK06525 344 FLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-408 |
1.22e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.59 E-value: 1.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 52 FSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESlmRKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLI 131
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIER--ERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 132 IITRWGNQTErLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNylvMNMWSQDMSSLWSS-----NLLWLACIMAFMVK 206
Cdd:PRK07691 147 LIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLN---MADISVKIAELSAGqtgliTVVAILFLFVFATK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 207 MPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR-LTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSL 285
Cdd:PRK07691 223 AGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARtFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 286 IAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLT 365
Cdd:PRK07691 303 IIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALS 382
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 108742982 366 NLALPPFINLIGELFVIMASFSWSNFTIIITGFNMLITALYSL 408
Cdd:PRK07691 383 LAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-405 |
4.98e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.02 E-value: 4.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 115 LILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLnylvmnmwsqDMSSLWSSN- 193
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTY----------SLSELLASGd 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 194 --------LLWLACIM--AFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTMILNPTtkimAYPFI 262
Cdd:PRK12647 187 virehplyLAILLLVLggAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGGT----PLWQT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 263 MLCLWG---MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHS 339
Cdd:PRK12647 261 ILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGT 340
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 340 RTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASF---SWSNFTIIITGF-NMLITAL 405
Cdd:PRK12647 341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLILTVAAVLgNALMVAV 410
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-372 |
6.90e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 67.61 E-value: 6.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 145 AGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYlvMNMWSQDMSSLWSSNLLWLAcIMAFMVKMPLYGLHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDF--AAMRAAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 225 IAGSMVLAAVLLKLGGYGMLRLTM-ILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 301 --ILMQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPF 372
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPL 401
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-412 |
1.16e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 66.51 E-value: 1.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 52 FSLTFFSDSLSSpLLMLTVWLLPLMIMASQHHLTKESLMRKKLYlSMLIFLQMFLIMTFTATELILFYILFESTLIPTLI 131
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMAYGFGDIEHSGRRYGFP-PFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 132 IITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYG 211
Cdd:PRK12663 147 LIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 212 LHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLR-LTMILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK12663 226 FM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRvFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 291 VSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALP 370
Cdd:PRK12663 305 ISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 108742982 371 PFINLIGELFVIMASFSWSNFTIIITgfnMLITALYSLYMLT 412
Cdd:PRK12663 385 PFSGFWGKVLLVQGALDNGAYILLAL---MLITSLITMYSLF 423
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-411 |
3.52e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.84 E-value: 3.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 51 NFSLTFFSDSLSSPLLMLT--VWLLPLM-IMASQHHLTKESLMRKKLYLSMLIFLQMFLIMTftaTELILFYILFESTLI 127
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIgfLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 128 PTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLacimafMVK 206
Cdd:PRK06589 151 STAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG------IAK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 207 MPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMI---LNPTTKI--MAYPFIMLCLWGMIMTSSICLRQTD 281
Cdd:PRK06589 224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDN 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 282 LKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLL 361
Cdd:PRK06589 304 IKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISI 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 108742982 362 ASLTNLALPPFINLIGELFVIMASFSWSNFT--IIITGFNMLITALYSLYML 411
Cdd:PRK06589 384 SSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLL 435
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-330 |
5.29e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 65.06 E-value: 5.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 95 YLSMLIFLQMFLIMTFtATELILFYILFESTLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALIYVQKSLGSL 174
Cdd:PRK12650 113 YLLMTAFMAAMLLLVL-ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 175 NY---LVMNMWSQDmSSLWSSNLLWLAciMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILN 251
Cdd:PRK12650 190 SLsgiLHSDVWAEK-PGLTTVVAVLIA--VAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 108742982 252 PTTkIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12650 267 DVA-VWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-419 |
9.59e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 64.01 E-value: 9.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 83 HLTKESLMRKKLYLSMLIFlqMF-LIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:PRK12646 101 YLSSRKDNLPRFYFYLTLF--MFsMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 162 VALIYVQKSLGSLNYL-VMNMWSQDMSSLWSSNLLWLACIMAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLG 239
Cdd:PRK12646 179 VGFIMLYIMTGTNNITeILGQADHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 240 GYGMLRLTMILNpTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-----LMQTPWSFMGATA 314
Cdd:PRK12646 257 IFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIY 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 315 LMIA---------HGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTnLALPPFIN--LIGELF--- 380
Cdd:PRK12646 336 VFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFlda 414
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 108742982 381 ----VIMASFSWSnFTIIITGFNM---LITALYSLYMLTMTQRGKF 419
Cdd:PRK12646 415 ltqtGQLSQFSLI-SMIIIVFIGViasIFTFTYALYMVKEVFWGKY 459
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-405 |
5.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.27 E-value: 5.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 75 LMIMASQHHLTKESLMRKKLYLSMLIFLQMFLIMTftATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK08376 105 LAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 155 IGSLPLL--VALIYVQKSLGSLNYLVMNMwSQDMSSLWSSNLLWLacIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLa 232
Cdd:PRK08376 183 LASSMVLlgIALLYGQYGTLNMAYLAVKM-SENPTVVAKIALALF--IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML- 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 233 aVLLKLGG-YGMLRLTM-ILNPTTKIMAYPFIMLCL--WGMIMTSSICLRQTDLKSLIAYSSVS---HMAL---VIVAIL 302
Cdd:PRK08376 259 -LVIKQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAAL 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 303 MQTPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLI 376
Cdd:PRK08376 338 GDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFA 417
|
330 340
....*....|....*....|....*....
gi 108742982 377 GELFVIMASFSwsnFTIIITGFNMLITAL 405
Cdd:PRK08376 418 SKWLIYESSAL---FNPILGVIAMIGSVL 443
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-396 |
1.74e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 59.84 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 155 IGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSlwsSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 235 LLKLGGYGMLRLTMIlnpTTKIMAYPFIMLCLWGMImTSSI----CLRQTDLKSLIAYSSVSHMALV-------IVAILM 303
Cdd:PRK08042 222 VMKIGLLGILTLSLL---GGNAPLWWGVALLVLGMI-TAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagVTGIAL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 304 QTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGEL 379
Cdd:PRK08042 298 EQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW 377
|
250
....*....|....*..
gi 108742982 380 FVIMASFSWSNFTIIIT 396
Cdd:PRK08042 378 VIYQSFFKLSNSGAFVA 394
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
95-327 |
7.08e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 54.90 E-value: 7.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 95 YLSMLIFLQMfliMTFTATELILFYilfestliptliiitrwgNQTERLNAGL-YFLFYTLIGSLpLLVALIYVQKSLGS 173
Cdd:PRK12668 115 LLTLFVFWEL---MAFTSTFLVWAR------------------GTKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGS 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 174 LnyLVMNMWSQDMSSLWssnllwLACImAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRL---TMIL 250
Cdd:PRK12668 173 F--AFGAIAGLGGTAAW------LILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELL 243
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 108742982 251 NPTTKIMA-YPFIMLCLwgmimtssiclrQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 244 IYIGAAMAvYGVFFALL------------ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-447 |
1.15e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.97 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 119 YILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 199 CIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMI-----LNPTTKIMAYPFIMLCLWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 274 SICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 354 LMATWWLLASLTNLALPPFINLIGELFvIMASFSWSNFTIIITGFnMLITALYSLYMLTMTQRGKFtyhihniKPSYTRE 433
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWY-ILDAFIKSNAWIGLVVL-LVGSGLSVIYVWKIVEALYF-------ESRMVES 445
|
330
....*....|....
gi 108742982 434 NTLMSMHMLPLIML 447
Cdd:PRK12662 446 KANDKAFKTPNAMV 459
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-414 |
1.33e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 53.93 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 95 YLSMLIFLQMFLImtfTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSL 174
Cdd:MTH00020 116 YLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 175 NYL-VMNMwsqdMSSLWSSNLLWLaCIMAF---MVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygML 244
Cdd:MTH00020 193 DFSsVFNM----VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------LI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 245 RLTMILNPTTKIMAYPFIMLCLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQtpwSFMGATALMIAHGLTSS 324
Cdd:MTH00020 262 RSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 325 MLFCLANSnyeRIHS----RTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS--WSNFTIIITGF 398
Cdd:MTH00020 338 LLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqyYLIFAYWLGCF 414
|
330
....*....|....*.
gi 108742982 399 NMLITALYSLYMLTMT 414
Cdd:MTH00020 415 SALLTAFYSIRLIYLT 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
2.08e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.42 E-value: 2.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 59 DSLSSPLLMLTVWLLPLMIMASQHHLTKESLMRKKL-YLSMLIFLQMFLImtfTATELILFYILFESTLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLcYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 138 NQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMN---MWSQDMSSLWSSNLLWLACIMAFMV--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 206 --KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTmilnPTTKIMAYPFIMLCLWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 281 DLKSLIAYSSVSHMALVIVAILMQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQAFLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 108742982 356 ATWWLLASLTNLALPPFINLIGELFVIMASFSWSNFTI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-371 |
6.92e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.75 E-value: 6.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 53 SLTFFSDSLSSpLLMLTVWLLPLMIMA--SQHHLTKESLMRKKLYLsmLIFLQMFLIMTFTATELILFyILFESTLIPTL 130
Cdd:PRK12649 73 EFSIYADGLAV-LIGLIASGIGVIIMSysNGYMSHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYLVMNMWSQDMSSLWSSNLLWLACIMAFM---VKM 207
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 208 PLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTMILNPTTKImaypFIMLCLWGMI---MTSSICLRQTDLK 283
Cdd:PRK12649 229 AQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 284 SLIAYSSVSHMALVIVAILMQTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQAFLPLMATWW 359
Cdd:PRK12649 304 AILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVA 383
|
330
....*....|..
gi 108742982 360 LLASLTNLALPP 371
Cdd:PRK12649 384 SIAALAMAGIPP 395
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
9.35e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.46 E-value: 9.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 111 TATELILFYILFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALIYVQKSLGSlnYLVmnmwSQDMS 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT--YRL----SELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 188 SLWSSNLLWLA--CIMAFMV-KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRLTMILNpTTKIMAYPFIM 263
Cdd:PRK12644 195 DPPTGPAVSVAvvLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFA-DVPVWRPTVLV 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 108742982 264 LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-384 |
1.72e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.11 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 9 IMLFPVIWYSNSSMIWINMTSYSLMISLMTLpLLNQTESNSNNFSLTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKES 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALALL-LLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 89 LMRKKLYLSMLIFL--QMFLIMtftATELILFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VAL 164
Cdd:COG1007 99 LLRGEFYALLLFATlgMMLMAS---ANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 165 IYVqkSLGSLNYLVMNMWSQDMSSlwSSNLLWLACIM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGY 241
Cdd:COG1007 176 LYG--ATGSLNLAGIAAALAAGGA--NSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 242 GML-RLTMI-LNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAH 319
Cdd:COG1007 251 AALlRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAY 330
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 108742982 320 GLTSSMLF-CLANSNYERIHSRTMLLARGLQAFLPLMAtWWLLASLTNLA-LPPFINLIGELFVIMA 384
Cdd:COG1007 331 LFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSA 396
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
186-419 |
1.50e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.33 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 186 MSSLWSSNLL--WLACIMAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAVLLklggygMLRLTMIL 250
Cdd:PRK07376 212 LSELVSSGAVsgWLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL------VARMYPVF 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 251 NPttkimaYPFIMLCL-WGMIMTS----SICLRQTDLKSLIAYSSVSHMALVIVAilmqtpwsfMGATAL------MIAH 319
Cdd:PRK07376 285 EQ------FPAVMTVIaWTGAITAflgaSIALTQNDIKKGLAYSTISQLGYMVMA---------MGCGAYsaglfhLMTH 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 320 GLTSSMLFCLANS---------NYERIHSRTMLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSN 390
Cdd:PRK07376 350 AYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP 429
|
250 260
....*....|....*....|....*....
gi 108742982 391 FTIIITGFNMLITALYSLYMLTMTQRGKF 419
Cdd:PRK07376 430 ALWFVGFLTAGMTAFYMFRMYFLTFEGEF 458
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
23-408 |
1.88e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 46.89 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 23 IWINMTSYSLMISLmtlplLNQTESNSNNFSLTFFSDSLSspLLMLTVWLL-PLMIMASQHHLTKESLMRKKLYLSMLIF 101
Cdd:MTH00208 75 IWILLGCPNINISL-----SNWLSNTLFNFSLSFIFDFYF--ILFFSVALFvTWSIIEFSHYYMSNDPNKNAFFRLLIIF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 102 LQMFLIMTFTaTELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALiyvqkslgSLNYLVMNM 181
Cdd:MTH00208 148 LLNMLILTSS-NNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFL--------SLSLINFNS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 182 WS-QDMSSL-----WSSNLLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRLTM 248
Cdd:MTH00208 219 WNlNEILSLnnsnsFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSP 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 249 ILNPTTKIMAYPFIMLCLWGmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSfmgATALMIAHGLTSSMLFC 328
Cdd:MTH00208 292 LISNSPWFLSLCLILGSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFL 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 329 LANSnyeRIHS-------RTMllaRGLQAFLPLMATWWLLASLTnLALPPFI------NLIGELFVImasfSWSNFTIII 395
Cdd:MTH00208 368 CSGS---IIHSlnneqdlRKM---GGLSFLLPVTSSCIILGSLA-LMGTPFLagfyskDLILEAGLA----SISNLLSII 436
|
410
....*....|....
gi 108742982 396 TGF-NMLITALYSL 408
Cdd:MTH00208 437 LALiATLLTAVYSF 450
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-402 |
2.08e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 137 GNQTERLNAGLYFLFYTLIGSLPLL--VALIYvqKSLGSLNylvMNMWSQDMSSLWSSN--LLWLACIM---AFMVKMPL 209
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLigVGLIY--GVTGTLN---MADLAQRIAQLPAADraLLEAGAALllvVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 210 YGLHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMLRL-TMILNPTTKIMAYPFIMLCLWGMIMTSSI----CLRQTDL 282
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 283 KSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLAN-----------------SNYERIHSRTMLLA 345
Cdd:PRK12666 304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVG 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108742982 346 RGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS--------WSNFTIIITGFNMLI 402
Cdd:PRK12666 384 VAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
95-387 |
1.81e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 43.66 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 95 YLSMLIFLQMFLIMTftATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL--VALIYVqkSLG 172
Cdd:PRK05777 107 LLVLFALLGMMVMVS--ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLygMSLLYG--ATG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 173 SLNYLVMNMWSQDMSSlwSSNLLWLACIM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-LR-LT 247
Cdd:PRK05777 183 SLSFAGIAKALADGSG--NSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRlLV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 248 MILNPTTKIMAYPFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTS---- 323
Cdd:PRK05777 260 VAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTlgaf 339
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 108742982 324 SMLFCLANSNYERIHSRTMllaRGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS 387
Cdd:PRK05777 340 GVISLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVE 400
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
91-327 |
2.42e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 43.40 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 91 RKKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKS 170
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 171 LGSLNYlvmnmwSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygM 243
Cdd:MTH00211 188 LNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------L 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 244 LRLTMILNPTTKIMAypfIMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-LMQTPWSFMgataLMIAHG 320
Cdd:MTH00211 255 IRLSPLFQNNQLILG---AVLLLGAltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLgLNQPQLAFL----HICTHA 327
|
....*..
gi 108742982 321 LTSSMLF 327
Cdd:MTH00211 328 FFKAMLF 334
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
99-384 |
2.75e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.10 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 99 LIFLQMFLIMTftATELILFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALIYVQKSLGSLNY 176
Cdd:MTH00196 1 MVALGILCLIS--SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 177 LVMNMWSQDMSSLWSSNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMLRLTMILNPTTKI 256
Cdd:MTH00196 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 257 maypFIMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFC--LANSNY 334
Cdd:MTH00196 155 ----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSiiLALNVY 230
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 108742982 335 erihsRTMLLA-RGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMA 384
Cdd:MTH00196 231 -----KNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLS 276
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-387 |
4.69e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.33 E-value: 4.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 262 IMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILMQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 108742982 342 MLLARGLQAFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFS 387
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQ 395
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-457 |
1.08e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 41.30 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 1 MLKIIMPTIMLFPVIWYSNSSMIWINMTSYSLMISL--MTLPLLNQTESNSNNFSLTF---FSDSLSSPLLMLTVWLLP- 74
Cdd:MTH00004 13 LLILLTPILLPLLSKNLKNSPTTIKTTVKLAFLISLipLTLFLNSGTESITTNWPWIFtttFNIPISFKLDQYSLMFLPi 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 75 -LMI-----------MASQHHLTKeslmrKKLYLsmLIFLQMFLIMTfTATELILFYILFESTLIPTLIIITRWGNQTER 142
Cdd:MTH00004 93 aLFVtwsilefstwyMASDPHITK-----FFKYL--LIFLIAMLILI-TANNMFQLFIGWEGVGIMSFLLIGWWSGRAEA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 143 LNAGLYFLFYTLIGSLPLLValiyvqkslgSLNYLVMNMWSQDMSSLWSSN----LLWLACIMAFMVKMPLYGLHLWLPK 218
Cdd:MTH00004 165 NTAALQAIIYNRIGDIGLIL----------SMAWLAMTLNTWEIQQLFSPTqtptLPLLGLILAATGKSAQFGLHPWLPA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 219 AhVEAPIAGS-------MVLAAVLLklggygMLRLTMILNPTTKIMaypfiMLCLWGMIMTS---SIC-LRQTDLKSLIA 287
Cdd:MTH00004 235 A-MEGPTPVSallhsstMVVAGIFL------LIRTHPLLQNNQTAL-----TICLCLGALTTlfaATCaLTQNDIKKIIA 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 288 YSSVSHMALVIVAI-LMQTPWSFMGatalMIAHGLTSSMLFCLANSnyeRIHS-------RTMllaRGLQAFLPLMATWW 359
Cdd:MTH00004 303 FSTSSQLGLMMVTIgLNQPQLAFLH----ISTHAFFKAMLFLCSGS---IIHNlnneqdiRKM---GGLQKTLPITSSCL 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 360 LLASLTnLALPPFI------NLIGElfVIMASF--SWsnfTIIITGFNMLITALYSLYMLTMTQRGkftyhihnikpsYT 431
Cdd:MTH00004 373 TIGNLA-LMGTPFLsgfyskDTIIE--TLNTSYlnAW---ALLLTLLATSFTAAYSLRMILLVQTG------------FP 434
|
490 500 510
....*....|....*....|....*....|..
gi 108742982 432 RENTLMSMH------MLPLIMLTFNpKIIMGL 457
Cdd:MTH00004 435 RTPPTTPINentptiINPITRLALG-SILAGL 465
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
98-301 |
1.17e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.43 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 98 MLIFLQMFLIMTfTATELILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYVQKSLGSLNYl 177
Cdd:MTH00066 119 LLIFLIAMMILV-TANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWEL- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 178 vmnmwsQDMSSLWSSN-LLWLACIMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRL-TM 248
Cdd:MTH00066 197 ------QQIFLLNDNStLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL------LIRFhPL 263
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 108742982 249 ILNPTTKIMaypfIMLCLWGM--IMTSSICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00066 264 LENNQTALT----ICLCLGALttLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI 314
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
92-364 |
1.94e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.54 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 92 KKLYLSMLIFLQMFLIMTFTATELILFYILFESTLIPTLIIITRWGNQTErlnAGLYFLFYTLIGSLPLLVALIYVQKSL 171
Cdd:PRK06459 71 GKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 172 GSLNYlvmnmwsqdmsSLWSSNLLWLACIMAFMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMI 249
Cdd:PRK06459 148 GTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTIL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108742982 250 LNPTTKIMAYPFIMLCLWGMIMTSSICLRQTD-LKSLIAYSSVSHMALVIVAI--------LMQTPWSFMGATALM--IA 318
Cdd:PRK06459 217 TQTIPIGYFGLTILAIGAFSILFGALYAYVSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFA 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108742982 319 HGLTSSMLFC------------LANSNYERIHSRTMLLARGLQAFLPL---MATWWLLASL 364
Cdd:PRK06459 297 HSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| |
