|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
20-587 |
1.91e-93 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 300.23 E-value: 1.91e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 20 ETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSIGAESNMRIRGGGdsSKQVLIMMDG 99
Cdd:COG4771 28 EEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVS-VTRSGGRGGSSGISIRGLG--GDRVLVLIDG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 100 RPLNDTSL-GLVDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAI-PKTEVGARIENYNTRIYDFTFSA 177
Cdd:COG4771 105 VPVNNPALgGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELeGSVSLGYGSNGNGTYSGSLSLGG 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 178 MPGKANVFITGNRSFSDGFME--------NSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSELGVPGTNNVPLSEYNNSL 249
Cdd:COG4771 185 PGDKLSFLLSGSYRDRDGYLDyrnggfvgNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 250 ERVASTPFAEQSENAYYTQLGHKISVkdlpfeSNLYWDYKKKRYEDTDSFTD---TTSRPQNIGFNSQV-----GVHNAI 321
Cdd:COG4771 265 GDRDTTTDRGNYSLRYNGDLGDNLDL------SLYYSRTDRDSTNGSLGGSTgsfSDSDDTTYGLELDLtyplgGNHTLT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 322 VGIDFRNEGFkRSDNKEETINKNRSNSAVFVQRTFEM-QKLSLTPGVRYDYNSSYKGTT----NPRILAVYNLSKILKLS 396
Cdd:COG4771 339 LGAEYRYDDL-DSSSFLGGADASRDTYGLFAQDEWKLtDKLTLTAGLRYDYYSTFGASNytafSPRLGLRYDLSDNLTLR 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 397 SNIGTAFRSPTFEDLYspliswPETMWGNAGDTKGNTDLKPEKSVGADIGTELRLSDV-FTSKITFFYNDIKDLIEWQNI 475
Cdd:COG4771 418 ASYGRGFRAPSLAELY------GSGTGTPGRYVLGNPDLKPETSDNYELGLEYRLGNGgLSLSLTGFYTDIKDLIVLVPV 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 476 SNlSTLDTWRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLESMGRENGTYKTLQYTPRHRINYYASYFAPLKIKTRL 555
Cdd:COG4771 492 GP-GPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLL 570
|
570 580 590
....*....|....*....|....*....|....*
gi 1085035283 556 RVEYTHKQEW---VNFVKYELPGYTLVNFGIRRAV 587
Cdd:COG4771 571 LTRYYGGRYVtppSGRLEGYTPGYTLLDLRASYKL 605
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
20-618 |
5.50e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 281.72 E-value: 5.50e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 20 ETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGsiGAESNMRIRGGGDSSKQVLIMMDG 99
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVS-VTSAG--GGAGQISIRGFGGGGNRVLVLVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 100 RPLNDTSLGLVDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAiPKTEVGARIENYNTRIYDFTFSAMP 179
Cdd:COG1629 79 VPLNDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDG-KGGEVSASYGSYGTYRASLSLSGGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 180 GKANVFITGNRSFSDGFMENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSEL---GVPGTNNVPLSEYNNSLERVASTP 256
Cdd:COG1629 158 GKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQdspGYLTLAALRPRGAMDDGTNPYSND 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 257 FAEQSENAYYTQLGHKISVKDLPFESNLYWDYKKKRYE--------DTDSFTDTTSRPQNIGFNSQV-------GVHNAI 321
Cdd:COG1629 238 TDDNTRDRYSLSLEYEHLGDGLKLSASAYYRYDDTDLDsdftptpaDGGTLEQTDFDNRTYGLELRLtydlgfgGKHTLL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 322 VGIDFRNE-------------GFKRSDNKEETINKNRSNSAVFVQRTFE-MQKLSLTPGVRYDY-----NSSYKGTT--- 379
Cdd:COG1629 318 VGLDYQRQdldgsgypldlgsGSLPTLTSGADDDGTTTSLALYAQDTYKlTDKLTLTAGLRYDYvsydvDDTVTGTDsas 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 380 --------NPRILAVYNLSKILKLSSNIGTAFRSPTFEDLYSPliswpetmwGNAGDTKGNTDLKPEKSVGADIGTELR- 450
Cdd:COG1629 398 gsrsysafSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN---------GTDPYSVGNPDLKPETSTNYELGLRYRl 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 451 LSDVFTSKITFFYNDIKDLIEWQNISNLSTLDTwRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLESMGRENGTY-- 528
Cdd:COG1629 469 LDGRLSLSLALFYSDVDNEILSVPLPNDSGFST-YYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDGsa 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 529 ----KTLQYTPRHRINYYASYFAPLKIKTRLRVEYTHKQEW--VNFVKYElPGYTLVNFGIR-RAVLQSELFFSIDNIFD 601
Cdd:COG1629 548 dldgNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLddANTQGAP-GGYTLVDLGAGyRFGDNLTLSLGVDNLFD 626
|
650
....*....|....*..
gi 1085035283 602 KRYVSRRNYPLPGRTFY 618
Cdd:COG1629 627 KKYATSLSVRASNVRGF 643
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
40-623 |
6.17e-71 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 242.14 E-value: 6.17e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 40 VGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSIGAESNMRIRG-GGDSSKQVLIMMDGRPLNDTSLG--LVDLSQiS 116
Cdd:COG4772 45 VSVVDREELENQAATSLREVLRRVPGVN-VQEEDGFGLRPNIGIRGlGPRRSRGITLLEDGIPIAPAPYGdpAAYYFP-D 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 117 TENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAiPKTEVGARIENYNTRIYDFTFSAMPGKANVFITGNRSFSDGF 196
Cdd:COG4772 123 LERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTA-FGGELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGF 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 197 MENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSELGVPG------------TNNVPLSEYNNSLERVAST---PFAEQS 261
Cdd:COG4772 202 RDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGgltdaqfdadprQSYRPADQFDTRRTQLSLRyehQLSDNT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 262 E---NAYYTqlghkisvkdlpfESNLYWDYKKKRYEDTDSFTDTTSRP---QNIGFNSQVGV--------HNAIVGIDFR 327
Cdd:COG4772 282 TlttTAYYN-------------DFSRNWYIRQNTADPNTPGLGLRGNPrgyRSYGIEPRLTHrfelggvpHTLEVGLRYH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 328 NEGFKR-----------------SDNKEETinknrSNSAVFVQRTFE-MQKLSLTPGVRY-DYNSSYKGT---------- 378
Cdd:COG4772 349 REEEDRkqyvntygqgrsgaglrRDRRFSA-----DALAAYAQNRFElTGRLTLTPGLRYeHIRRDRTDRystrtggdds 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 379 -------TNPRILAVYNLSKILKLSSNIGTAFRSPTFEDLYSPliswpetmwgnagdTKGNTDLKPEKSVGADIGTELRL 451
Cdd:COG4772 424 gsnsyseFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYG--------------NGGNPDLKPEKSWNYELGTRGRI 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 452 SDVFTSKITFFYNDIKDLIEWQNISNLSTLDTwrpVNVGKAFSRGIEFEIENEITKDLKHNF----NYNYLESMGRENGT 527
Cdd:COG4772 490 GNGLSAEVALFYIDYDNELGSCSAAGGDRSTF---TNAGETRHQGLELALDYDLLKGGGLGLplfaAYTYTDAEFTSDFG 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 528 Y----KTLQYTPRHRINYYASYfAPLKIKTRLRVEYTHKQeWVNF-------VKYELPGYTLVNFGIRRAVLQS-ELFFS 595
Cdd:COG4772 567 PvfagNRLPYVPRHQLTAGLGY-EHGGWTANLNGRYVSEQ-FTDAantvadgSFGKIPSYTVLDLSASYDFGKNlSLFAG 644
|
650 660 670
....*....|....*....|....*....|....*
gi 1085035283 596 IDNIFDKRYVSRRN-------YPLPGRTFYGGINL 623
Cdd:COG4772 645 VNNLFDKRYIASRApnyaagiRPGPPRTVYAGLRL 679
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
39-622 |
1.96e-70 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 240.05 E-value: 1.96e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 39 NVGVVSEDEIRDSNVKSVGEVLRNKTGITDVskRGSIGAESNMRIRGGGDSskQVLIMMDGRPLN-DTSLGLVDLSQIST 117
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVT--RGGGGGGSTISIRGFGPD--RTLVLVDGLPLAsSNYGRGVDLNTIPP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 118 ENIEKIEVLRGPASALYGANALGGVVNLVTRKsATAIPKTEVGARIENYNTRI---YDFTFS---AMPGKANVFITGNRS 191
Cdd:cd01347 77 ELIERVEVLKGPSSALYGSGAIGGVVNIITKR-PTDEFGGSVTAGYGSDNSGSsggGGFDVSgalADDGAFGARLYGAYR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 192 FSDGFM------ENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSELGVPG-------------------TNNVPLSEYN 246
Cdd:cd01347 156 DGDGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGgtlpangtgsslgggpssnTNGDRDWDYR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 247 NSLERVASTPFAEQSE--------NAYYTQLGHK----ISVKDLPFESNLYWDYKKKRYEDTDSFTDTTSRPQNIGFNSQ 314
Cdd:cd01347 236 DRYRKRASLGLEHDLNdtgwtlraNLSYSYTDNDgdplILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPV 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 315 vgVHNAIVGIDFRNEgfkrsdnkeetiNKNRSNSAVFVQRTFEMQ-KLSLTPGVRYDYNSSYK--------------GTT 379
Cdd:cd01347 316 --AHTLTLGVEYRRE------------ELDEKQTALYAQDTIELTdDLTLTLGLRYDHYDQDSkdtiaggttakksySHW 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 380 NPRILAVYNLSKILKLSSNIGTAFRSPTFEDLYSPLIswpetmwGNAGDTKGNTDLKPEKSVGADIGTELRLSDVFTSKI 459
Cdd:cd01347 382 SPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGS-------HGGTAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSA 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 460 TFFYNDIKDLIEWQNISNLSTLDTwRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLESMGRENGTY---KTLQYTPR 536
Cdd:cd01347 455 ALFRIDIKNEIVSTPTNTGLGLVT-VYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDGAttgNRLPGIPK 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 537 HRINYYASY-FAPLKIKTRLRVEYTHKQeWVNFVKY----ELPGYTLVNFGIRRAVLQS-ELFFSIDNIFDKRYVSR--- 607
Cdd:cd01347 534 HTANLGLDYeLPDEGLTAGGGVRYRGKQ-YADTANGnntvKVPGYTLVDLSASYQFTKNlTLRLGVNNLFDKDYYTSlsv 612
|
650 660
....*....|....*....|
gi 1085035283 608 -----RNYPLPGRTFYGGIN 622
Cdd:cd01347 613 rgsglYGYYGPGRTYYLSVS 632
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
19-618 |
7.84e-53 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 191.23 E-value: 7.84e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 19 QETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGItDVSKRGSIGAESNMRIRGggDSSKQVLIMMD 98
Cdd:TIGR01779 28 LDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGV-SIAQNGGRGQNTSLFLRG--TESDHVLVLID 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 99 GRPLNDTSLGLVDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAiPKTEVGARIENYNTRIYDF-TFSA 177
Cdd:TIGR01779 105 GIRFGSAAAGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGG-QGTTLSAGLGSLDYQEYSIaSGVA 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 178 MPGKANVFITGNRSFSDGFM-----------ENSDYELTNVTSKIGYDFNKYGEFFLS-------NGFLDSELGVPGTNN 239
Cdd:TIGR01779 184 IGENGWYSVALGTESTKGINvrpggpgvydpDRDGFRSDSLLLGGGHRFDESWSLFVNalryenrNDYDNYSFGTRLYKE 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 240 VPLSEYNNSLERVASTPFaEQSEnaYYTQLGHKISVKDlpfesnlywDYKKKRYEDTdsfTDTTSRPQNIGFNSQV--GV 317
Cdd:TIGR01779 264 AEKGDQSFTGGRQRQSER-DVSE--LTLSTGKSKDWDY---------AYSKGRYSST---SDTREQRNIQWQNDLLvgDG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 318 HNAIVGIDFRNEGFKRSDNKEETinkNRSNSAVFVQRTFEMQKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILKLSS 397
Cdd:TIGR01779 329 WVLAGGVDWQKDSIISSTADKED---DRSNTAAFAQVLQQWGQQLLEASLRRDDNQQFGSHTTGSIAWGYQFIEELRFTA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 398 NIGTAFRSPTFEDLYSPliswpetmwgnagdTKGNTDLKPEKSVGADIGTELRLSDVfTSKITFFYNDIKDLIEWQNisn 477
Cdd:TIGR01779 406 SYGTAFKAPNLNQLYYP--------------SYGNPNLQPETSKSAELGFYGLFSGG-KWSISGYRTKINDLIDYDS--- 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 478 lstlDTWR-PVNVGKAFSRGIEFEIENEiTKDLKHNFNYNYLESmgRENGTYKTLQYTPRHRINYYASY-FAPLKIKTRL 555
Cdd:TIGR01779 468 ----HPKGyPNNIGEARIKGVEATAEFA-TGGWTHQLSVDLLDA--QNVNTGNTLPRRARQMYKWNADRaFEQFDWGASY 540
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1085035283 556 RVEYTHKQEWVNFVKYE---LPGYTLVNFGIRRAVLQS-ELFFSIDNIFDKRYVSRRNYPLPGRTFY 618
Cdd:TIGR01779 541 QYVGKRYDDDYNTYPTQnvrLGGYSLLDLRVSYYVTDSwTVQGRIANLFDKDYETAYGYPQAGRAYY 607
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
23-268 |
2.57e-50 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 175.83 E-value: 2.57e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 23 VYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSIGAESNMRIRGGgdSSKQVLIMMDGRPL 102
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQ-VSSSGGPGSAASISIRGL--GSNQTLVLIDGVPL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 103 NDTSLGLVDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAiPKTEVGARIENYNTRIYDFTFSAMPGKA 182
Cdd:COG4206 79 NDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKG-FKGSVSASYGSFGTRRLSASLSGGAGKF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 183 NVFITGNRSFSDGF-------MENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSELGVPGTNNVPLSEYNNSLERVAST 255
Cdd:COG4206 158 SYSLSASYRRSDGYryndpdlRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYKLS 237
|
250
....*....|...
gi 1085035283 256 PFAEQSENAYYTQ 268
Cdd:COG4206 238 DGWSLLLLAYYYY 250
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
39-622 |
7.70e-47 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 175.07 E-value: 7.70e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 39 NVGVVSEDEIRDSNVKSVGEVLRNKTGITDVSKRGSIGaeSNMRIRGGGDSSKqvlIMMDGrpLNDTSLGLVDlsqisTE 118
Cdd:COG4774 12 SVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNG--DSFSIRGFSASGD---IYVDG--LRDPGQYRRD-----TF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 119 NIEKIEVLRGPASALYGANALGGVVNLVTrKSATAIPKTEVGARIENYNTRIYDFTFS-AMPGKANVFITGNRSFSDGFM 197
Cdd:COG4774 80 NLERVEVLKGPASVLYGRGSPGGVINLVT-KRPTDEPFTEVTLTYGSDGQRRATLDVNgPLGDDLAYRLNGMYRDSDSYR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 198 ENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSEL----GVPGTNNVPLSEYNNSleRVASTP--FAEQSENAYYTQLGH 271
Cdd:COG4774 159 DGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRtpdyGVPAVANGRPVDVDRS--TFYGQPddYSDSETDSATLRLEH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 272 KISvKDLPFESNLYW-DYKKKRYEDTDSFTDTT---------SRPQNIGFNSQVGV----------HNAIVGIDFRNEGF 331
Cdd:COG4774 237 DFN-DNWTLRNALRYsDYDRDYRNTYPTGGNATgtvtrsayrRDQDNDTLSNQTDLtgkfdtggvkHTLLAGVEYSREDS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 332 KR------------------------SDNKEETINKNRSNS-AVFVQRTFEM-QKLSLTPGVRYDY-------------N 372
Cdd:COG4774 316 DNarysgggtaptvnlynpvygapvtGPTLGGADNDSRTDTtGLYLQDTISLtDRWSLLAGLRYDRfdtdytdrttgatT 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 373 SSYKGT-TNPRILAVYNLSKILKLSSNIGTAFRSPTfedlyspliswpetmwGNAGDTKGNTDLKPEKSVGADIGTELrl 451
Cdd:COG4774 396 SSYDDSaFSPRAGLVYKPTPNLSLYASYSTSFNPGG----------------GAPSLSNAGQALDPEKSRQYEVGVKW-- 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 452 sDVFTSKITF----FYndikdlIEWQNISNLSTLDTWRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLESMGRENGT 527
Cdd:COG4774 458 -DLLDGRLSLtaalFR------IEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSAN 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 528 Y----KTLQYTPRHRINYYASY-FAPLKIKTRLRVEYTHKQEWVNFVKYELPGYTLVNFGIRRAVLQS-ELFFSIDNIFD 601
Cdd:COG4774 531 AanvgNRLPNVPRHSASLWTTYdLPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNlTLRLNVNNLTD 610
|
650 660
....*....|....*....|....*.
gi 1085035283 602 KRYVSR-----RNYPLPGRTFYGGIN 622
Cdd:COG4774 611 KRYYASaygsgYVTPGAPRTVLLSAS 636
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
35-623 |
2.46e-46 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 173.75 E-value: 2.46e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 35 KSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITDVSKRGSiGAESNMRIRGGGDSSKQVLIMMDGRPLNDTSlglvDLSQ 114
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGT-TQFGNITIRGFGLEVDIDNVYLDGVPLLSRG----NLAI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 115 ISTENIEKIEVLRGPASALYGANALGGVVNLVTRKsATAIPKTEVGARIENYNTRIYDFTFSAMPGKANVF---ITGNRS 191
Cdd:TIGR01783 76 VDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKR-PQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFrgrLNGARQ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 192 FSDGFMENSDYELT------------NVTSKIGYDFNK------YGEFFLSNGflDSELGVPGTNNVPLSEYNNSLER-- 251
Cdd:TIGR01783 155 DGDSFYDGAGEETRlgatatdwqlddRTLLRLGAYYQKerdrggYGGLPASGG--TSGRDLSSDRYLGTSSNRNYDDRey 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 252 -VASTPFAEQSENAYYtqlgHKISVKDLPFESNLYWDYKKKRYEDTDSFTDT-TSRPQNIGFNSQVGVHNAIV------- 322
Cdd:TIGR01783 233 lSYGLSLEYQFNDVWT----GKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSlTVVNVKQDRVQIDAGLDGEFetgpieh 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 323 -----GIDFRNEGFKRSDNKEETINKNRSN-------------------------SAVFVQRTFEMQKLSLTPGVRYDYN 372
Cdd:TIGR01783 309 dlllgVSYGQRTTNRFNNTGYPSDNIYSLTatssartdigdspkdralssttkalNGVALQRILLADKWTLTLGGRYDSV 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 373 SSY-------------KGTTNPRILAVYNLSKILKLSSNIGTAFRSPTFEDLyspliswpetmwgnaGDTKGNTDLKPEK 439
Cdd:TIGR01783 389 DVKsnngvagstgkrdDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPK---------------GAGNSGDILEPEK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 440 SVGADIGTELRLSDVFTSKITFFYNDIKDLIEWQniSNLSTLDtwrpVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLE 519
Cdd:TIGR01783 454 GKNYELGVRYDLGDSLLATAALFRITKDNQLVQD--PVNGTFS----VNAGKTRNRGVELEARGYLTPGLSLSAGYTYTD 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 520 SMGRE--NGTY--KTLQYTPRHRINYYASYFAP---LKIKTRLRVEYTHKQEWVNFVKYELPGYTLVNFGIRRAVLQSE- 591
Cdd:TIGR01783 528 AEFTEdtNGDTqgNTVPFVPKHTASLWASYAPPvgdNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKn 607
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1085035283 592 --LFFSIDNIFDKRYV--------SRRNYPLPGRTFYGGINL 623
Cdd:TIGR01783 608 ltLALNVNNLFDRDYYtsgyrwgpSAYIYPGAPRTVGLSVSY 649
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-623 |
3.42e-42 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 161.87 E-value: 3.42e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 1 MRKLFLTLLFCGVGILWSQ---------ETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSk 71
Cdd:PRK13483 6 AQVISALCLLPAVFVTHALaqaapdktmETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVV-VT- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 72 rGSiGAESNMRIRGGGdsSKQVLIMMDG--------RPlNDTSLGLVDLSQISTENIEKIEVLRGPASALYGANALGGVV 143
Cdd:PRK13483 84 -GG-GDRTDISLRGMG--SQYTLILVDGkrqssretRP-NSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 144 NLVTRKsataIPKTEVGA-RIEnynTRIYDFTFSAMPGKANVFITG---------------NRSFSD----GFmenSDYE 203
Cdd:PRK13483 159 NIITRK----VPNEWQGEvRLD---TTLQENSDSGNVYQANFFVNGplikdllglqlygqyTQREEDdiegGY---RDKD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 204 LTNVTSKIGYDFNKYGEFFLSNGFLDSEL-GVPGTNNVPLSEYNNSLERVASTPFAEQSENAYYTqLGHkisvkdlpfes 282
Cdd:PRK13483 229 ARSLTAKLALTPNEDHDIMLEVGTSNQERdSTVGKTVAPLAPGESCGRRGCPESSTTEYERSTVS-LSH----------- 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 283 NLYWDYKKKR-YEDTDSFtDTTSRP---QNIGFNSQVGV-----HNAIVGIDFRNEgfkrsDNKEETINK-------NRS 346
Cdd:PRK13483 297 TGRWDFGTSDtYIQHEEF-DNKSREmkiKNTDFQSSLVAplgqeHTLTFGAAYNHQ-----DLTDETSNQisdltdiSRT 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 347 NSAVFVQRTFEM-QKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILKLSSNIGTAFRSPtfeDLYSPLISWPETMWGn 425
Cdd:PRK13483 371 QWAVFSEDEWRIaDDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAP---SLRQTTPDWGQVSRG- 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 426 aGDTKGNTDLKPEKSVGADIGTELRLSDVFTSKITFFYNDIKDLIewQNISNLSTLDTWRP----------VNVGKAFSR 495
Cdd:PRK13483 447 -GNIYGNPDLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDKI--TRVACPATQCTDGPnqfgadpttyVNIDEAVTQ 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 496 GIEFEIENEITKDLKHNFNYNYLESMgRENGTYK--TLQYTPRHRINYYASYFAPLKIKTRLRVEYTHKQEW-------V 566
Cdd:PRK13483 524 GVEASLSYPITSTLSLSGNYTYTDSE-QKSGAYKgsPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQpttgpssS 602
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 567 NFVKyelPGYTLVNFGIRRAVLQS-ELFFSIDNIFDKRyVSRRNYP--LPGRTFYGGINL 623
Cdd:PRK13483 603 SFIA---PSYTFLDLGANYQLTDNlKLSAGIYNLFDKE-INYEEYGyvEDGRRYWLGMTY 658
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
33-622 |
4.41e-41 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 158.78 E-value: 4.41e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 33 IEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSigaESNMRIRGGgdSSKQVLIMMDG--------RPLND 104
Cdd:PRK13513 49 IQDAPASISVVTREQLENKAYRDVTDALKDVPGVV-VTGGGS---TSDISIRGM--AAKYTLILVDGkrvdtrstRPNSD 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 105 TSlGLVDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRK-----------SATAIPKTEVGariENYNTRIYdf 173
Cdd:PRK13513 123 GS-GIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKvqkewhgslraDATLQEDSKSG---DIFQTNAY-- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 174 tfSAMP---GKANVFITGNRS------FSDGFMENsdyELTNVTSKIGYDFNKYGEF-FLSNGFLDSELGVPGTNNVplS 243
Cdd:PRK13513 197 --ASGPlidGLLGLKVSGLLShrsedkIIDGYNEQ---RMRNGTATFSLTPDDNNEFdFEIGRYVQDRNSTPGRTLA--L 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 244 EYNNSLERVASTPFAeQSENAYYTQlghkisvkdlpFESNLYWdykkKRYEDTDSFTDTTSrpQNIGFNSQ----VGVHN 319
Cdd:PRK13513 270 NGTNSDTQYDRNNYA-ITHNGYYDF-----------GNSTSYI----QRDETRNPSRQMKS--VDTIFNTQtsflLDDHT 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 320 AIVGIDFRNEGFKRSDNK---EETINK-NRSNSAVFVQRTFEM-QKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILK 394
Cdd:PRK13513 332 LSLGGQYRYEELYDKGNQlpsASDLNKlTRWSWALFAEDEWQMtNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWT 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 395 LSSNIGTAFRSPtfeDLYSPLISWPETMWGNAGDTK--GNTDLKPEKSVGADIGTELRLSDVFTSKITFFYNDIKDLIew 472
Cdd:PRK13513 412 LKGGVSTGYRSP---DLRQATDNWGQLTGGGGLPALilGNSDLKPEKSISQEIGILWDNQENLNASVTLFNTDFKDKI-- 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 473 QNISNLSTLDTWRP--------------VNVGKAFSRGIEFEIENEITKDLKHNFNYNYLES---MGRENGtyKTLQYTP 535
Cdd:PRK13513 487 TEVRNCDTTNTDGQcvfnginydfisdrINVDKANMRGVEATFNWDINQAWSLATNYTFTQSeqkSGAFAG--QPLNQMP 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 536 RHRINYYASYFAPLKIKTRLRVEYTHK-QEWVNFVKYE--LPGYTLVNFGIR-RAVLQSELFFSIDNIFDKRyVSRRNYP 611
Cdd:PRK13513 565 KHMANATLNWQTTEDFATWIRINYRGKtSEYLNRTSMGsgTPSYTFVDLGASyQLTKELRLMGGVYNLLDKR-VDIDVND 643
|
650
....*....|...
gi 1085035283 612 --LPGRTFYGGIN 622
Cdd:PRK13513 644 kvLDGRRYMVGAS 656
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
20-622 |
1.19e-39 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 154.47 E-value: 1.19e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 20 ETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGItDVSKRGSIGAESnMRIRGGGDSskQVLIMMDG 99
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGV-DVTGGGRPPGQS-INIRGLQDN--RVLVVVDG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 100 RPLNDTSLGLVD-LSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAI-PKTEVGARIE-NYNTRIYDFTFS 176
Cdd:TIGR01785 78 ARQNYQRGGAHNgSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLrPGQLFGGLAKlSYGSNNNSFGGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 177 AMPGKAN-----VFITGN-------RSFSDGFMENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSELGVPgTNNVPLSE 244
Cdd:TIGR01785 158 VAVAGRLddnldALVAATyrdggnyRNGNKEEATNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEA-QNSGPGTE 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 245 YNNSLervaSTPFAEQSENAYYTQLGHKISVKD---LPFESNLYW------DYKKKRYEDTDSFTDTTSRPQNIGFNSQV 315
Cdd:TIGR01785 237 YVLGS----SSTLLASSTRDRSATLTYNWTPEDnpwLDATASLYYnrtendNDRSARGVGREEGYQYTTYGATLQNTSRF 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 316 GV---HNAIVGIDF---RNEGFKRSDNKEETINKN-----RSNSAVFVQRTFEM--QKLSLTPGVRYDYNSSYKGTT--- 379
Cdd:TIGR01785 313 DVaswSTLTYGVDWmkdKRRTESFDPNSVTTIVPNppsakEYFFGLFLQDNIPLldDRLTLSAGLRYDHYKLSPKTTadt 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 380 ----------NPRILAVYNLSKILKLSSNIGTAFRSPTFEDLY----SPLISWPETMwgnagdtKGNTDLKPEKSVGADI 445
Cdd:TIGR01785 393 eavdrsysrwSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYgtgdHPGTPGGYTF-------APNPNLKPETSKTWEL 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 446 GTELRLSDVFTS------KITFFYNDIKDLIE----WQNISNLSTLDTWRPVNVGKAFSRGIEFEIeNEITKDLKHNFNY 515
Cdd:TIGR01785 466 GANLSFDNLLLDndqlqfKVAYFYNDVKDFIDltigVTDNVTAGMNNITQYVNIDGARIRGIEASA-SYDAGLWATGLSY 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 516 NYLEsmGRENGTYKTLQYTPRHRI----NYyasYFAPLKIKTRLRVEYTHKQEWVNFVK-------YELPGYTLVNFGIR 584
Cdd:TIGR01785 545 GYTI--GKDQNTNQWLSNIPPLKLvvtvGY---RFPDRRLDLGAKAAYYERQSESPTTEdvaanglLTTPGYTVVDLYAT 619
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1085035283 585 ---RAVLQSELFFSIDNIFDKRYVSRRNYPL--PGRTFYGGIN 622
Cdd:TIGR01785 620 yqpNAVKGLTVRFGVNNLTDRKYTPAQSVPGagPGRNFKGSVK 662
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
21-622 |
6.85e-39 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 152.36 E-value: 6.85e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 21 TTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITDVSKRGsiGAESNMRIRGGGDSSkqvlIMMDGR 100
Cdd:COG4773 50 KSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDG--GGRDSFSIRGFSIDN----YLRDGL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 101 PLNDTSLGLVDlsqisTENIEKIEVLRGPASALYGANALGGVVNLVTrKSATAIPKTEVGARIENYNTRIYDFTFSampG 180
Cdd:COG4773 124 PLGGFGGGQPD-----TANLERVEVLKGPAGLLYGAGSPGGLVNLVT-KRPTAEPQGEVSLSAGSWDTYRATADVG---G 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 181 KanvfITGNRSF----------SDGFMENSDYELTNVTSKIGYDFNKYGEFFLSNGFLDSElGVPGTNNVPLSEYNNSLE 250
Cdd:COG4773 195 P----LNEDGTLryrlnaayedGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDD-STGDRGFLPLDGTLLDLP 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 251 RvaSTPFAE------QSENAYYTQLGHKISvKDLPFESNLYWDYKKKRYE----------DTDSFT----DTTSRPQNIG 310
Cdd:COG4773 270 R--STNLGEpwdyydTETTTLFAELEHRFN-DDWSLRANARYSDSDRDGRsayaygapdaATGTLTryasARDGDSRSDS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 311 FNSQV-------GV-HNAIVGIDFRNEGFKRSDNKEETIN-------------------KNRSNS-AVFVQRTFE-MQKL 361
Cdd:COG4773 347 LDANLngkfetgGLeHTLLVGADYSRYDSDSDSATAGTINiynpvygnlpepdfdasdtDTTTRQtGLYAQDQISlTDRL 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 362 SLTPGVRYDYNSSYKGTTNPRILAVYNLSkilKLSSNIGTAFRsptFEDLYSPLISWPETMWGNAGDTKGNTDLKPEKSV 441
Cdd:COG4773 427 SLLLGGRYDWYETDSTNRLGGSTTSYDDS---AFTPRAGLVYD---LTPGLSLYASYSESFEPQSGADNNGNPLDPETGK 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 442 GADIG--TELRLSDVFTSkITFFynDIKDliewQNISNLSTLDTWRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLE 519
Cdd:COG4773 501 QYEAGvkGELFDGRLNAT-LAVF--DITQ----KNVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTD 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 520 SMGRENGTY---KTLQYTPRHRINYYASYFAPLKIKTRLR----VEYTHKQEWVNFVKYELPGYTLVNFGIRRAVLQS-E 591
Cdd:COG4773 574 AKITKDADAlegKRLTNVPRHTASLWTTYRFPSGALKGLGlgggVRYVGERYGDAANTFTLPSYTLVDAGARYDLGKNwT 653
|
650 660 670
....*....|....*....|....*....|....*.
gi 1085035283 592 LFFSIDNIFDKRYVSR-----RNYPLPGRTFYGGIN 622
Cdd:COG4773 654 LQLNVNNLFDKKYYASsgsrgYVYYGAPRNVRLSLS 689
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
263-623 |
5.61e-37 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 144.14 E-value: 5.61e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 263 NAYYTQLGHKISVKDLPFESNLYWDYKKkRYEDTDSFTDTTSRPQNIGFNSQVGVHNAIVGIDFRNEGFKRSDNKEETI- 341
Cdd:pfam00593 84 GLRYSSLDGDYTSNSSGLSGAGDYLSDD-RLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANp 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 342 ------NKNRSNSAVFVQRTFEMQ-KLSLTPGVRYDYNSSYKGTT--------------NPRILAVYNLSKILKLSSNIG 400
Cdd:pfam00593 163 ssssysDTTTDSYGLYLQDNIKLTdRLTLTLGLRYDHYSTDGDDGngggdnfsrsysafSPRLGLVYKPTDNLSLYASYS 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 401 TAFRSPTFEDLYSPLISWpetmwGNAGDTKGNTDLKPEKSVGADIGTELRLSDVFTSkITFFYNDIKDLIEWQNISNLST 480
Cdd:pfam00593 243 RGFRAPSLGELYGSGSGG-----GGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLS-LALFYIDIKNLITSDPDGPGLG 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 481 LDTWRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYLESMGRENGTY--KTLQYTPRHRINYYASYFAPLKI-KTRLRV 557
Cdd:pfam00593 317 GTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADDtgNPLPNVPRHTANLGLTYDFPLGGwGARLGA 396
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1085035283 558 EYTHKQEWVNF---VKYELPGYTLVNFGIR-RAVLQSELFFSIDNIFDKRYVSRRN--------YPLPGRTFYGGINL 623
Cdd:pfam00593 397 RYVGSGERRYGdaaNTFKTPGYTLVDLSAGyRLNKNLTLRLGVNNLFDKYYKRYYSsgggnlggYPGPGRTFYLGLSY 474
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
6-622 |
1.57e-35 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 142.33 E-value: 1.57e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 6 LTLLFCGVGILWSQETTVYIGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSigAESNMRIRG 85
Cdd:PRK10064 17 ISCAWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQ-LTNEGD--NRKGVSIRG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 86 GgDSSkQVLIMMDGRPLNDTSLGL----VDLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRK-----SATAIPK 156
Cdd:PRK10064 94 L-DSS-YTLILIDGKRVNSRNAVFrhndFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKigqkwHGTVTVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 157 TEVGARIENYNTRIYDFtFSAMP---GKANVFITGN--RSFSDGfMENSDYELTNVTSKIgydfnkygEFFLSN-GFLDS 230
Cdd:PRK10064 172 TTIQEHRDRGDTYNGQF-FTSGPlidGVLGMKAYGSlaKREKDD-PQNSTTTDTGETPRI--------EGFTSRdGNVEF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 231 ELGVPGTNNVPLSEYNNSLERVASTPFAEQSENAYYTqLGHkisvkdlpfesNLYWDY---KKKRY-EDTDSFTDTTSRP 306
Cdd:PRK10064 242 AWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYS-LSH-----------NGRWDYgnsELKYYgEKVENKNPGNSSP 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 307 QNIGFNSQVGvhNAIVGIDFRNE-----GFKRSDNKEETINKNRSNS--------AVFVQRTFEM-QKLSLTPGVRYDYN 372
Cdd:PRK10064 310 ITSESNSIDG--KYTLPLTAINQfltfgGEWRHDKLSDAVNLTGGTSsktsasqyALFVEDEWRIfEPLALTTGVRMDDH 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 373 SSYKGTTNPRILAVYNLSKILKLSSNIGTAFRSPTFEDLySPliSWPETMWGNAGDTKGNTDLKPEKSVGADIGTELRLS 452
Cdd:PRK10064 388 ETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQL-SP--DWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 453 DVF----TSKITFFYNDIKDLIE------------------WQNISNLSTLDTWRPVNVGKAFSRGIEFEIENEITKDLK 510
Cdd:PRK10064 465 EGWlegvESSVTVFRNDVDDRISisrtsdvnaapgyqnfvgFETNGRGRRVPVFRYYNVNKARIQGVETELKIPFNDEWK 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 511 HNFNYNYLESMGRENGTYKTLQYTPRHRINYYASYFAPLKIKTRLRVE--YTHKQEWVNFVKYELPGYTLVNFGIRRAVL 588
Cdd:PRK10064 545 LSLNYTYNDGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSgnYTGQKRADSATAKTPGGYTIWNTGAAWQVT 624
|
650 660 670
....*....|....*....|....*....|....*..
gi 1085035283 589 QS-ELFFSIDNIFDKRyVSRRNYPL--PGRTFYGGIN 622
Cdd:PRK10064 625 KDvKLRAGVLNLGDKD-LSRDDYSYneDGRRYFMAVD 660
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
42-618 |
6.20e-33 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 133.96 E-value: 6.20e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 42 VVSEDEIRDSNVKSVGEVLRNKTGItDVSKRGSIGAESNMRIRGggDSSKQVLIMMDGRPLNDTSL-GLVDLSQISTENI 120
Cdd:PRK10641 48 VVTRDDIDRWQSKSVNDVLRRLPGV-DIAQNGGLGQLSSLFIRG--TNSSHVLVLIDGVRLNQAGIsGSADLSQIPISLV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 121 EKIEVLRGPASALYGANALGGVVNLVTRKSAtaiPKTEVGARI-----ENY----------NTRI-----YDFT--FSAM 178
Cdd:PRK10641 125 QRIEYIRGPRSAVYGSDAIGGVVNIITTRDK---PGTTLSAGWgsngyQNYdgstqqqlgdNTRVtlagdYTYTkgFDVV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 179 P-GKANVFITGNRsfsDGFMENSDYeltnvtSKIGYDFN-KYGEFFLSNGFldselgvpgTNNvplSEYNNSLerVASTP 256
Cdd:PRK10641 202 AyGNTGTQAQPDR---DGFMSKTLW------GGLEHQFNdQWSGFVRGYGY---------DNR---TDYDAYY--SPGSP 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 257 FAEQSEN--------------AYYTQLGHKIS-VKDLPFESNLywdykkKRYEDTDSFTDTTSRPQNIGFNSQVGVHNAI 321
Cdd:PRK10641 259 LIDTRQLysqswdaglrynggIYSSQLIASYShSKDYNYDPHY------GRYDSSATLDDMKQYNVQWGNTVQVGHGNIS 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 322 VGIDFRNEGFKRSDNKEETiNKNRSNSAVFVQRTFEMQKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILKLSSNIGT 401
Cdd:PRK10641 333 AGVDWQKQTTTPGTGYVPD-GYDQRNTGIYLTGQQQIGDVTLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYRFIASYGT 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 402 AFRSPTFEDLYSpliswpetmwgnagdTKGNTDLKPEKSVGADIGTElRLSDVFTSKITFFYNDIKDLIEWQNIsnlstl 481
Cdd:PRK10641 412 AFKAPNLGQLYG---------------FYGNPNLKPEESKQWEGGFE-GLTGPVNWRLSGYRNDIDNLIDYDDH------ 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 482 dTWRPVNVGKAFSRGIEFeIENEITKDLKHNFNYNYLESmgRENGTYKTLQYTPRHRINYYASY-FAPLKIKtrLRVEYT 560
Cdd:PRK10641 470 -TLKYYNVGKATIKGVEW-TGNFDTGPLTHQVTLDYVDP--RNAITDEPLARRAKQQVKYQLDWqLYDFDWG--VTYQYL 543
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1085035283 561 HKQEWVNFVKY-----ELPGYTLVNFGIRRAVlQSELFF--SIDNIFDKRYVSRRNYPLPGRTFY 618
Cdd:PRK10641 544 GTRYDKDYSTYpyqtvKLGGVSLWDLAVSYPV-TSHLTVrgKIANLFDKDYETVYGYQTAGREYT 607
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
39-603 |
2.49e-32 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 132.82 E-value: 2.49e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 39 NVGVVSEDEIRDSNVKSVGEVLRnktGITDVSKRGsiGAES-NMRIRG-GGDSSkqvLIMMDGRPLN------DTSLGLV 110
Cdd:PRK13484 50 SVSVITSEQLQKKPVSDLVDAVK---DVEGISITG--GNEKpDISIRGlSGDYT---LILVDGRRQSgresrpNGSGGFE 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 111 DLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTR--KSATAIPKTEVGARIENY----NTRIYDFTFSA------- 177
Cdd:PRK13484 122 AGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKpvNNQTWDGVLGLGGIIQEHgkfgNSTTNDFYLSGplikdkl 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 178 ---MPGKANVFITGNRSFSDGFMENSdyeltNVTSKIGYDFNKYGEFFLSNGFLDSELGV-PG------TNNVPLSEYNN 247
Cdd:PRK13484 202 glqLYGGMNYRKEDSISQGTPAKDNK-----NITATLQFTPTESQKFVFEYGKNNQVHTLtPGesldawTMRGNLKQPNS 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 248 SLERVASTPFAEQSENAYYTQLGHKISV---------KDLPFESNLYWDYK--KKRYEDTDSFTD---TTSRPQNIgfns 313
Cdd:PRK13484 277 KRETHNSRSHWVAAWNAQGEILHPEIAVyqekvirevKSGKKDKYNHWDLNyeSRKPEITNTIIDakvTAFLPENV---- 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 314 qvgvhnAIVGIDFRNEGFK--RSDNKEETINKNRS--NSAVFVQRTFEM-QKLSLTPGVRYDYNSSYKGTTNPRILAVYN 388
Cdd:PRK13484 353 ------LTIGGQFQHAELRddSATGKKTTETQSVSikQKAVFIENEYAAtDSLALTGGLRLDNHEIYGSYWNPRLYAVYN 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 389 LSKILKLSSNIGTAFRSPTFEDLySPliSWPETMWGNAGDTKGNTDLKPEKSVGADIGTELRLSDVFTSKITFFYNDIKD 468
Cdd:PRK13484 427 LTDNLTLKGGIAKAFRAPSIREV-SP--GFGTLTQGGASIMYGNRDLKPETSVTEEIGIIYSNDSGFSASATLFNTDFKN 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 469 LIEWQNISN---LSTLDTWRPVNVGKAFSRGIEFEIENEITKDLKHNFNYNYL--------ESMGRENGTYKTLQYTPRH 537
Cdd:PRK13484 504 KLTSYDIGTkdpVTGLNTFIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTdsrrksddESLNGKSLKGEPLERTPRH 583
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1085035283 538 RINYYASYFAPLKIKTRLRVEYTHKQEW-VNFVKYELP----GYTLVNFGIRRAVLQSELF-FSIDNIFDKR 603
Cdd:PRK13484 584 AANAKLEWDYTQDITFYSSLNYTGKQIWaAQRNGAKVPrvrnGFTSMDIGLNYQILPDTLInFAVLNVTDRK 655
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
40-622 |
2.09e-31 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 130.23 E-value: 2.09e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 40 VGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSIGAeSNMRIRGGGDSskQVLIMMDGRPLNDTSLGL----VDLSQI 115
Cdd:TIGR01786 25 VSVISREQLKSQQVRNLRDLLRYEPGVS-VVEGGRGGS-QGINIRGLDKN--RVAVLVDGIRQNTSYGGQgstfYAINSI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 116 STENIEKIEVLRGPASALYGANALGGVVNLVTRKSATAI-PKTEVGARIEN-YNTRIYDFTFS----AMPGKANVFITG- 188
Cdd:TIGR01786 101 DPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLkPGKDLGGLSKLgYSSANNRFTQSvaaaGRNDDVDALVQAt 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 189 ------NRSFSDG---------FMENSDYELTNVTSKIGYDFN--KYGEFFLsNGFLDSELGVPGTNNVPLSEYNNSLER 251
Cdd:TIGR01786 181 yrrgheLKNGNKAnigneskrsKPNPSDYKSQSFLAKLGWQLNdaHRLGLSL-EYTQTDYDEPEMTNTSYLTKPLGAPLL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 252 VASTPFAEQSENAYYTQLGHKISVKDLPFESNLYWDYKKK----------------------RYEDTDSFTDTTSRPQN- 308
Cdd:TIGR01786 260 SSTVVLGDSKTRDRRTGLDYELNPDNSWLDTVKLALDKQYiqlynylnatsasdypgvdkngRYKDKYDYYTLGFDTNNk 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 309 IGFNsqVGVHNAIVGIDFRNEGFKRSD--------------NKEETINKNRSNSAVFVQRTFEM-QKLSLTPGVRYDY-- 371
Cdd:TIGR01786 340 IEFS--VHSLSLTYGLDRFKDKVSTGDsrrnlptaaynlygYEGENRPVKGSNFGLFLQDNIKLgDWLSLSAGLRYDHyk 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 372 ---------NSSYKGTT----NPRILAVYNLSKILKLSSNIGTAFRSPTFEDLYspliSWPETMWGNAGDTKGNTDLKPE 438
Cdd:TIGR01786 418 tdpkadeskDYGAISKTysrwSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELY----GTGAHPGGGPYTFLPNPNLKPE 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 439 KSVGADIGTELRlSDVFTSKITFFYNDIKDLIEwQNISNLSTLDTWR--------PVNVGKAFSRGIE------FEIENE 504
Cdd:TIGR01786 494 TSKNWEIGINLH-FDQLDFKVSYFRNDYKDFID-LGIGVTAKGNMAQvgsntitnYVNIDNARIRGIElsgrydLGSFFS 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 505 ITKDLKHNFNYNYLEsmGRENGTYKTLQYTPRHR----INYYA-----------SYFAPlKIKTRLRVEYTHKQEWVNFV 569
Cdd:TIGR01786 572 GPDGWTTTLKYGYTK--GKDSDTNPWLNAITPLKvvlgLGYDHpdekwgvgltlTFSGA-KDAVDAYATYYENGEAAKAG 648
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1085035283 570 KYELPGYTLVNF-GIRRAVLQSELFFSIDNIFDKRY----------VSRRNYPLPGRTFYGGIN 622
Cdd:TIGR01786 649 PLRTPSYTVVDLyGYYKPNKNLTLRFGVYNLLDRKYttwesarqagPLATGYTAPGRNYKASVE 712
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
35-621 |
6.71e-30 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 125.64 E-value: 6.71e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 35 KSATNVGVVSEDEI-RDSNVKSVGEVLRNKTGI--TDVSKRGSIGAESNMRIRGGGdsSKQVLIMMDGRPLndTSLGLV- 110
Cdd:PRK13528 48 KQQPGVSIITAEDIkKRPPVNDLSDIIRKMPGVnlTGNSASGTRGNNRQIDIRGMG--PENTLILIDGVPV--TSRNSVr 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 111 -----------DLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKsataiPKTEVGARIENY----------NTR 169
Cdd:PRK13528 124 yswrgerdtrgDTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKR-----PTNDWHGSLSLYtnqpesskegATR 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 170 IYDFTFSA-MPGKANVF-ITG--NRSFSDGFMENSDYELTNVTSKIGY---DFNKYGEFFLS-NGFLDSELGVPGTNNVP 241
Cdd:PRK13528 199 RANFSLSGpLAGDALTMrLYGnlNKTDADSWDINSSAGTKNAAGREGVrnkDINGVLSWKMTpQQILDFEAGYSRQGNIY 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 242 LSEYNNSlervASTPFAE------QSENAYYTQ---LGHkisvkdlpfesNLYWDYKKKR----YEDTDS---------- 298
Cdd:PRK13528 279 AGDTQNS----NSSAVTEslaksgKETNRLYRQnygLTH-----------NGIWDWGQSRlgfyYEKTNNtrmneglagg 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 299 --------FTDTTSRPQNIGFNSQVGV-------HNAIVGIDFRNEGFK-----RSDNKEETI-----------NKNRS- 346
Cdd:PRK13528 344 gegritadQTFTTSRLESYRTSGELNVplnwlfeQTLTVGAEWNRDELNdpsstSLTVKDGDIggisgsaadrsSKNKSe 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 347 NSAVFVQRTFE-MQKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILKLSSNIGTAFRSPTFED------LYSPLISWP 419
Cdd:PRK13528 424 ISALYVEDNIEpVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLYQssegylLYSRGNGCP 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 420 ETMWGNAGDTKGNTDLKPEKSVGADIGTELRLSDVFTSkITFFYNDIKDLIEWQN-----ISNLSTLDTWRpvNVGKAFS 494
Cdd:PRK13528 504 KDITSGGCYLVGNKNLDPEISVNKEIGLEFTVDDYHAS-VTYFRNDYQNKIVAGDdvigrTASGAYILQWQ--NGGKAVV 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 495 RGIEFEIENEITKD-LKHNFNYNY-LESMGRENGtyKTLQYTPRHRINYYASYFAPLKIKTRLRVEYTHKQE-------W 565
Cdd:PRK13528 581 EGLEGNLLVPLMKDrLNWNTNATYmITSEQKDTG--NPLSVIPKYTINSTLDWQITQALSANVNWTLYGKQKprthaesR 658
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1085035283 566 VNFVK----YELPGYTLVNFGIRRAVLQS-ELFFSIDNIFDKRyVSRRN-----YPLPGRTFYGGI 621
Cdd:PRK13528 659 SEETGglsgKELGAYSLVGVNVNYDINKNlRLNVGVSNLFDKQ-IYREGegantYNEPGRAYYAGV 723
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
32-142 |
2.82e-28 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 108.90 E-value: 2.82e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 32 PIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITDVSkrGSIGAESNMRIRGGGDSskQVLIMMDGRPLNDTSLGLVD 111
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSS--GGGGGGSSISIRGFGSN--RVLVLVDGVPLNSGGGGSVD 76
|
90 100 110
....*....|....*....|....*....|.
gi 1085035283 112 LSQISTENIEKIEVLRGPASALYGANALGGV 142
Cdd:pfam07715 77 LNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
30-620 |
8.81e-27 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 115.50 E-value: 8.81e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 30 EIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITDVSKRGSIGA-ESNMRirggGDSSKQVLIMMDGRPLNDTSLg 108
Cdd:PRK13486 36 EKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGlEISIR----GMPASYTLILIDGVRQGGSSD- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 109 lVDLSQISTEN---------IEKIEVLRGPASALYGANALGGVVNLVTRKSA----TAIpKTEVGARIENY--NTRIYDF 173
Cdd:PRK13486 111 -VTPNGFSAMNtgfmpplaaIERIEVIRGPMSTLYGSDAMGGVVNIITRKNAdkwlSSV-NAGLNLQESNKwgNSSQFNF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 174 TFSA--MPGKANVFITGNRSFSDGfmeNSDYELTNVT-SKIGY-----DFNKYGEF---FLSNGFLDSELgvpgtnNVPL 242
Cdd:PRK13486 189 WSSGplVDDSVSLQVRGSTQQRQG---SSVTSLSDTAaTRIPYptesqNYNLGARLdwkASEQDVLWFDM------DTTR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 243 SEYNNSLERVASTPFAEQSENAY---YTQLGHKISVKDLPFESNLYWDYKKKRYEDTDSFT-----------DTTSRPQN 308
Cdd:PRK13486 260 QRYDNRDGQLGSLTGGYDRTLRYernKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVlkrdkwglagqPRELKESN 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 309 IGFNSQVGV-----HNAIVGIDFRNEGFKRSDNKEETINKNRSNS-AVFVQRTFEM-QKLSLTPGVRYDYNSSYKGTTNP 381
Cdd:PRK13486 340 LILNSLLLTplgesHLVTVGGEFQSSSMKDGVVLASTGETFRQKSwSVFAEDEWHLtDALALTAGSRYEHHEQFGGHFSP 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 382 RILAVYNLSKILKLSSNIGTAFRSPTFEDLYSPlISwpetmwGNAG----DTKGNTDLKPEKSVGADIGTELRLSDVFTS 457
Cdd:PRK13486 420 RAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKG-IS------GVSGqgktNLLGNPDLKPEESVSYEAGVYYDNPAGLNA 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 458 KITFFYNDIKDLIEWQNISNlstlDTWRPVNVGKAFSRGIEFEIENEI-TKDLKHNFNYNYLESMGRE-NGTYKTLQYTP 535
Cdd:PRK13486 493 NVTGFMTDFSNKIVSYSIND----NTNSYVNSGKARLHGVEFAGTLPLwSEDVTLSLNYTWTRSEQRDgDNKGAPLSYTP 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 536 RHRINYYASYFAPLKIKTRLRVEYTHK-----QEWVNFVKYE----------LPGYTLVNFGIRRAVLQS-ELFFSIDNI 599
Cdd:PRK13486 569 EHMVNAKLNWQITEEVASWLGARYRGKtprftQNYSSLSAVQkkvydekgeyLKAWTVVDAGLSWKMTDAlTLNAAVNNL 648
|
650 660
....*....|....*....|.
gi 1085035283 600 FDKRYVSRRNYPLPGRTFYGG 620
Cdd:PRK13486 649 LNKDYSDVSLYSAGKSTLYAG 669
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
33-622 |
1.92e-24 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 108.58 E-value: 1.92e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 33 IEKSATNVGVVSEDEI-RDSNVKSVGEVLRNKTGI--TDVSKRGSIGAESNMRIRGGGdsSKQVLIMMDGRPLndTSLGL 109
Cdd:PRK13524 48 QNLQAPGVSTITAEDIrKRPPANDVSEIIRTMPGVnlTGNSTSGQRGNNRQIDIRGMG--PENTLILIDGKPV--SSRNS 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 110 V------------DLSQISTENIEKIEVLRGPASALYGANALGGVVNLVTRKsataiPKTEVGARIENY----------N 167
Cdd:PRK13524 124 VrygwrgerdtrgDTNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKK-----PTGEWHGSWNTYfnapehkaegA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 168 TRIYDFTFS-AMPGKANVFITGN--RSFSDGFMENSDYELTNVTSKIGY-----------DFNkyGEF---FLSNGFLDS 230
Cdd:PRK13524 199 TKRTNFSLSgPLGDELSFRLYGNlnKTQADAWDINQGHQSARTGSYAGTlpagregvinkDIN--GLLrwdFAPLQSLEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 231 ELGVPGTNNVPLSEYNNSLERVASTPFAEQSENAYYTQ---LGHKiSVKDLPFESNLYWDYKKKRYE------------- 294
Cdd:PRK13524 277 EAGYSRQGNLYAGDTQNTNSDALVKSLYGKETNRMYRQnyaLTHR-GGWDNGVSTSNYAQYEHTRNSrlpeglaggtegi 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 295 -DTDSFTDTTSRPQNIGFNSQVGV-------HNAIVGIDFRNEGFKRSDNKEETI----------NKNRS------NSAV 350
Cdd:PRK13524 356 fNEKATQFSTIDLDDVMLHSEVNLpfdllvnQTLTLGTEWNQQRMKDPSSNTQALtsggaipgvsATGRSpyskaeIFSL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 351 FVQRTFE-MQKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILKLSSNIGTAFRSPtfeDLYSpliSWPETMW---GN- 425
Cdd:PRK13524 436 FAEDNMElTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAP---NLYQ---TNPNYILyskGQg 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 426 --AGDTK-----GNTDLKPEKSVGADIGTELRLSDVFTSkITFFYNDIKDLIEWQNISNLSTLDTWRPV----NVGKAFS 494
Cdd:PRK13524 510 cyASAGNgcylqGNDDLKAETSVNKEIGLEFKRDGWLAG-LTWFRNDYRNKIEAGYVPVGTNSVGKTDIyqweNVPKAVV 588
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 495 RGIEFEIENEITKDLKHNFNYNY-LESMGRENGTYktLQYTPRHRINYYASYFAPLKIKTRLRVEYTHKQEWVNFV---- 569
Cdd:PRK13524 589 EGLEGTLNVPVSETVNWTNNLTYmLQSKNKTTGDP--LSIIPEYTLNSTLSWQATEDLSLQSTFTWYGKQKPKKYNykgq 666
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1085035283 570 ------KYELPGYTLVNFGIRRAVLQS-ELFFSIDNIFDKRYVSRRN---------------YPLPGRTFYGGIN 622
Cdd:PRK13524 667 pvtgsaTKEVSPYSIVGLSATYDVTKNvSLTGGVDNLFDKRLWREGNaqttgdliagagaytYNEPGRTYYMSLN 741
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
39-517 |
5.70e-15 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 78.79 E-value: 5.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 39 NVGVVSEDEIRDSNVKSVGEVLRNKT-GITDVSKRGSIGAESNMRIRGGGD--SSKQVLIMMDGRPLNDtslglvDLSQI 115
Cdd:TIGR04056 97 AVSTVKAKELKKVPVSNLSNALQGKVaGVIITQSSGEPGGDAEIWIRGISSfgGNNSPLYVIDGVPRDN------GLSDL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 116 STENIEKIEVLRGPAS-ALYGANALGGVVnLVTRKSATAIpKTEVGARIE---NYNTRIYDF------------------ 173
Cdd:TIGR04056 171 NPEDIESISVLKDASAtAIYGSRGANGVI-LITTKRGKEG-KPKISYNAEfgfSTPTRLPEMlnayeyaelyneallnrg 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 174 -------------------------------------------TFSAMPG--KANVFITGNRSFSDGFMENSDYELTNVT 208
Cdd:TIGR04056 249 ssppdiytdeeieayrngldpdlypntdwqdeifkrtafnqrhNLSVSGGteKARYYVSLGYYNEEGILKNSDYKRYNFR 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 209 SKIGYDFNKYGEFFLS-NGFLDSELGVPGTNNVPLSE-------------------------YNNSLER----VASTPFA 258
Cdd:TIGR04056 329 ANIDAKLTKTLKLSLNvSGSLSKYNNPGGSTSNIWGAlmlfprgtpystppvysdgyypaynSGNTSLQnpyaLLNRGYN 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 259 EQSENAYYTQLGHKIS-VKDLPFESNL---YWDYKKKRYEDTDSFTDTTSRPQN------------------IGFNSQVG 316
Cdd:TIGR04056 409 ENERNRLNGNASLEQKiTKGLKLKGTFsydYSNYKNKKYYKNPYYYNATGGANNgyysesnsrsrnyyleatLNYNRTFG 488
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 317 VHN--AIVGIDFRNEGFKRSDNKEETINKNRSNSAVFVQRTFEMQK--LSLTPGVRYDYNSSYKGTTNPRILAVYNLSK- 391
Cdd:TIGR04056 489 KHNvsALLGYSQQENKSSSYGGLLDDLPSLDAGTSDASVSGSDSEYrlQSLFGRATYSYKDRYLLEFNFRYDGSSRFAKg 568
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 392 -----------------------------ILKL--------SSNIGTAFrsptfedLYSPLISW--PETMWGNAGDTK-- 430
Cdd:TIGR04056 569 nrwgffpsvslgwriseekfmkklkkwlsFLKLrasygivgNDNIGDRY-------PYLSLYNLgdGGYNFGTNNGTSvt 641
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 431 -------GNTDLKPEKSVGADIGTELRL-SDVFTSKITFFYNDIKDLIEWQNISNLSTLDTwRPVNVGKAFSRGIEFEIE 502
Cdd:TIGR04056 642 gitesryGNPNLKWEKTKKWNLGLDLGFfNNRLSLTVDYYYKKTKDILQSRSLPSVTGYSS-PYANIGKVKNKGVELSLN 720
|
650
....*....|....*..
gi 1085035283 503 --NEITKDLKHNFNYNY 517
Cdd:TIGR04056 721 yrNKIGKDFSWSVRGNF 737
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
26-606 |
2.60e-13 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 73.30 E-value: 2.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 26 GLKKEIPIEKSATNVGVVSEDEIRDSNV-KSVGEVLRNKTGITDvSKRGSIGAESNMRIRGGgdSSKQVLIMMDGrpLND 104
Cdd:PRK14050 69 GSKTDTPITEIPQSVSVVGRQEMDDRGVtNKVDEALRYTPGVLS-QPFGTDGDTDWFYIRGF--DATQTGVFLDG--LNL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 105 TSLGLVDLsQISTENIEKIEVLRGPASALYGANALGGVVNLVtRKSATAIP--KTEVGarIENYNTRIYDFTFSAMPGKA 182
Cdd:PRK14050 144 FSYGFGGF-QIDPFMLERVEVLKGPASVLYGGSNPGGIVNMV-SKRPLDEPlyYTEIG--INSYGNAFTGFDVGDKLSDD 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 183 NVF-------ITGNRSFSD------GF-MENSDYELTNVTSKIGYDFNKY-GEFFLSNGFLdselgvP--GTnnvplsey 245
Cdd:PRK14050 220 GTVryrvtgkVAGGDNYSDysedlrGFiMPQITYAPDDATSLTVYGYLSGlDQVHVGNGFL------PyvGT-------- 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 246 nnslerVASTPFAEQSENAYYTQ------------LGHKISVK---DLPFESNLYWDYKKKR--------YEDTDSFTDT 302
Cdd:PRK14050 286 ------VVDAPFGKIDRDAFYGEpdidngsyaqqmLGYEFSHEfdnGWTFSQNARYGHLHKHekgpytygYVGGATGLPD 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 303 TSRPQ----NIGFNSQVGV-------------------HNAIVGIDFRnegFKRSDNKEETINKN------------RSN 347
Cdd:PRK14050 360 PTGPDymlnRIGFEHRSKVdsfsidnrlegefdtgaltHNLLFGLDYK---YYRLDQVQACCGATpisatnpvygttQGA 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 348 SAVFVQRTFEMQKLS--------------LTPGVRYDYnssYKGTTNPRILAVYNLSKIlKLSSNIGTAFRsptFEDLYS 413
Cdd:PRK14050 437 NFVYLDQILTQQQIGiyaqdqirfgdgwlVTLNGRYDY---VDTDSDARIGTSYESNDG-ALSGRAGLAYE---FDNGLT 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 414 PLISWPETMWGNAGDTKGNTDLKPEKSVGADIGTELRlSDVFTSKITFFYNDIkDLIEWQNISNLSTLDTwrpvNVGKAF 493
Cdd:PRK14050 510 PYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYE-PSFIDGLITASVFQI-TKKNVTVTDPLTFAST----QLGEVR 583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 494 SRGIEFEIENEITKDLK--HNFNYNYLESMGRENGTY--KTLQYTPRHRINYYASYFAP------LKIKTRLRVEYTHKQ 563
Cdd:PRK14050 584 SRGFELEGKVNLDDNWKalASFTYTDLEITEDANPSLigNSPYLVPETQASLWLDYAVTdgafegVSLGAGVRYQGESWA 663
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1085035283 564 EWVNFVKyeLPGYTLVNFGIRRAVLQSELFFSIDNIFDKRYVS 606
Cdd:PRK14050 664 DEANTLK--VPAATLFDAAIRYEKNDWGASLNVANLFDKEYVA 704
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
26-176 |
1.84e-12 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 70.56 E-value: 1.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 26 GLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGITdVSKRGSIGAESNMRIRGGGDSSKQVLIMMDGRPLNDT 105
Cdd:PRK10044 69 GTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVS-VGTRGASNTYDHLIIRGFAASGQSQNNYLDGLKLQGN 147
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1085035283 106 SLGLVdlsQISTENIEKIEVLRGPASALYGANALGGVVNLVTrKSATAIPKTEVGARIENYNTRIYDFTFS 176
Cdd:PRK10044 148 FYNDA---VIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVS-KRPTTEPLKEVQFKMGTDNLFQTGFDFS 214
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
25-548 |
7.68e-07 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 52.21 E-value: 7.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 25 IGLKKEIPIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGitdvskrgsigaesnMRIRGGGDSSKQVLIMMDGRPLND 104
Cdd:PRK14049 68 TGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPG---------------ARVGAFGFDPRFDAFFVRGFDVTY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 105 TSLGLVDLSQ-------ISTE--NIEKIEVLRGPASALYGANALGGVVNLVTrKSATAIPKTEVGARIENYNTRIYDFTF 175
Cdd:PRK14049 133 TGVFRDNLRQpgasssiFKTEpyGLEGVSILRGPSSALYGASGAGGLFNLIT-KRPTEEPLREVQVQYGTNNRYQGQFDF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 176 S----------------------AMPGKAN--VFI------------------------TGNRSF----------SDGFM 197
Cdd:PRK14049 212 SgpvnetdpvyyrltgllrdadtEQVGVPDdrAYIapaftwkpdedtrltvlgeysrtkTGGTAAyyndpltgevTDIFA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 198 ENSDY-ELTNVTSKIGYDFnkygEFFLSNGFLDSELGVPGTNNVPLsEYNNSLERVASTPFAEQSENAYYTQLGHKISVK 276
Cdd:PRK14049 292 GNPAFnDSVQKQGRIGYEF----EHRLNDTFVFRQNARVSTLNIDA-DWAFAYAPNAADPTLLDSSAGTYDERLTAFVID 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 277 DL--------PFESNLY--WDYKKKRYEDTDSFtdTTSRPQNIGFNSQvgvHNAIVGIDFRNEGFkrsdnkeetinKNRS 346
Cdd:PRK14049 367 NQleakfdtgAFEHTLLagVDYTKLRFRALNGR--GVSPPLDTKNPTQ---GRPVAAIDFSTRTV-----------QDQW 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 347 NSAVFVQRTFEMQKLSLTPGVRYDYNSSYKGTTNPRILAVYNLSKILK-LSSNIGTAFRSPTFedlYSPLISWPETMWGN 425
Cdd:PRK14049 431 QLGTYLQDQIRYDAWTLTAGGRYDWVSTDTDTTDLATDSLTTVSQKDKeFSGRIGLTYETDFG---LAPYISYSTAFSPN 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 426 AG-DTKGNTDLKPEKSVGADIGTELRLSDVFTSKITFFYNDIKDLIEWQNISNLSTLDTWRPVNVGKAFSRGIEFEIENE 504
Cdd:PRK14049 508 AGfNRATNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTNIQVQRGKLRSRGFELEANTS 587
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1085035283 505 ITKDLKHNFNYNYLES---MGRENGTYKTLQYTPRHRINYYASYFAP 548
Cdd:PRK14049 588 LDNGLSLIASYTYTDVkiiQGPEGTIGNEVSSVPNHMASAWAHYTLP 634
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
335-622 |
8.52e-07 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 51.51 E-value: 8.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 335 DNKEETINKNRSN--------SAVFVQRTFEMQKLSLTPGVRY-----DYNSSYKGTTNPR--------ILAVYNLSKIL 393
Cdd:pfam14905 94 DNGEWVPDPSRSNdfdykeniYAAYASYSKKFGKWSYQAGLRAeytdiDGDSVTTNETFKRnyfnlfpsASLSYKLNDNN 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 394 KLSSNIGTAFRS--PTFEDLySPLISW--PETMwgnagdTKGNTDLKPEKSvgadigTELRLSDVFTSKITF--FYNDIK 467
Cdd:pfam14905 174 SLQLSLYYRRIInrPSYWDL-NPFRNYsdPYNY------SQGNPNLKPEYT------NSFELGYTYKWKLSLslSYRYTN 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 468 DLIEWQNISNLSTLDTW-RPVNVGKAFSRGIEFEIENEITKDLKHNFN----YNYLESMGRENGTYKTLQYTprhrINYY 542
Cdd:pfam14905 241 DVIQQTFITDDNDNVTYtTYENLGKSNSYGLELSASFNPTKWWSLNGNlngyYNKYKIDGSLNSDFSNFGFN----WNLN 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 543 ASYFAPLKIKTRLRVEYTHKQEWVNFvkyELPGYTLVNFGIRRAVL--QSELFFSIDNIFDKR-----------YVSRRN 609
Cdd:pfam14905 317 NTFTLPKGWSLQLNGNYRSPRVTGQG---KIKPFYSLDLGLSKSFLkkKLTLSLNVNDIFNTRkfrsttnydngFIQSYN 393
|
330
....*....|...
gi 1085035283 610 YPLPGRTFYGGIN 622
Cdd:pfam14905 394 NKWDSRSVRLSLS 406
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
32-149 |
1.06e-05 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 48.65 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 32 PIEKSATNVGVVSEDEIRDSNVKSVGEVLRNKTGItdvskrGSIGAESNmrirggGDSSKQVLIMMDGRplnDTSL---- 107
Cdd:PRK09840 67 PLADTTQTITVISEQVIKDQGATNLTEALRNVPGV------GTFFAGEN------GNTTTGDAIYMRGF---DTSNsiyv 131
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1085035283 108 -GLVDLSQISTE--NIEKIEVLRGPASALYGANALGGVVNLVTRK 149
Cdd:PRK09840 132 dGIRDIGSISRDtfNTEQVEVIKGPSGTDYGRSAPTGSINMISKQ 176
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
39-217 |
5.04e-03 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 39.85 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 39 NVGVVSEDEIRDSNVKSVGEVLRNKTGItdvSKRGSIGAESNMRIRGGGDSSkqvlIMMDGRP------------LNDTS 106
Cdd:PRK10003 81 SVSIVSQQRMEDQQLQTLGEVMENTLGI---SKSQADSDRALYYSRGFQIDN----YMVDGIPtyfesrwnlgdaLSDTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 107 LglvdlsqistenIEKIEVLRGPASALYGANALGGVVNLVtRKSATAIP-KTEVGARIENYNTRIYDFTFSAmP----GK 181
Cdd:PRK10003 154 L------------FERVEVVRGATGLMTGTGNPSAAINMV-RKHATSREfKGDVSAEYGSWNKQRYVADLQS-PltedGK 219
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1085035283 182 ANVFITGNRSFSDGFMENSDYE-----------LTNVTS-KIGYDFNK 217
Cdd:PRK10003 220 VRARIVAGYQNNDSWLDRYNSEktffsgivdadLGDLTTlSAGYEYQR 267
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
426-551 |
6.31e-03 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 39.79 E-value: 6.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085035283 426 AGDTKGNTDLKPEKSVGADIGTELRLSD---VFTSKItfFYNDIKDLIEWQNISNLStldtwrpvNVGKAFSRGIEFEIE 502
Cdd:PRK09840 553 SGNSANRTDFKPQKANTSEIGTKWQVLDkrlLLTAAL--FRTDIENEVEQNDDGTYS--------QYGKKRVEGYELSVA 622
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1085035283 503 NEITKDLKHNFNYNYLESMGRE------NGTyKTLQYTPRHRINYYASYFAPLKI 551
Cdd:PRK09840 623 GNITPAWQVIAGYTQQKATVKNgkdvaqDGS-SSLPYTPEHAFTLWSQYQATDDL 676
|
|
| |
