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Conserved domains on  [gi|1084827065|gb|OGQ60788|]
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hypothetical protein A3J24_10310 [Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8]

Protein Classification

type II toxin-antitoxin system RelE/ParE family toxin( domain architecture ID 10007814)

type II toxin-antitoxin (TA) system RelE/ParE family toxin is the RelE/ParE-like toxin component of a type II toxin-antitoxin system, its activity is attenuated by interaction with its cognate antitoxin

Gene Ontology:  GO:0110001|GO:0090729
PubMed:  20143871|20487277|28279904|15718296

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ParE COG3668
Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];
30-95 1.61e-05

Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];


:

Pssm-ID: 442885  Cd Length: 96  Bit Score: 39.87  E-value: 1.61e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1084827065 30 ALEFMAEIDRCVSQASKHPLQFAVVRE----DIRRVVADrfPYSVYFRAERHRIVVLAVFHSSRDPAIWL 95
Cdd:COG3668   29 AERYLDEIEEAIELLAEFPELGRPRPElrvpGLRELVVG--PYVIFYRVDDDTVEILRVLHGRRDLPALL 96
 
Name Accession Description Interval E-value
ParE COG3668
Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];
30-95 1.61e-05

Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];


Pssm-ID: 442885  Cd Length: 96  Bit Score: 39.87  E-value: 1.61e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1084827065 30 ALEFMAEIDRCVSQASKHPLQFAVVRE----DIRRVVADrfPYSVYFRAERHRIVVLAVFHSSRDPAIWL 95
Cdd:COG3668   29 AERYLDEIEEAIELLAEFPELGRPRPElrvpGLRELVVG--PYVIFYRVDDDTVEILRVLHGRRDLPALL 96
 
Name Accession Description Interval E-value
ParE COG3668
Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];
30-95 1.61e-05

Plasmid stabilization system protein ParE [Mobilome: prophages, transposons];


Pssm-ID: 442885  Cd Length: 96  Bit Score: 39.87  E-value: 1.61e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1084827065 30 ALEFMAEIDRCVSQASKHPLQFAVVRE----DIRRVVADrfPYSVYFRAERHRIVVLAVFHSSRDPAIWL 95
Cdd:COG3668   29 AERYLDEIEEAIELLAEFPELGRPRPElrvpGLRELVVG--PYVIFYRVDDDTVEILRVLHGRRDLPALL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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