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Conserved domains on  [gi|1082303959|emb|SAR31968|]
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Fimbrial subunit [Klebsiella variicola]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
198-341 3.88e-34

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 123.23  E-value: 3.88e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 198 VKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENV--GSVFMQFNAMVDSavAANEVIKIDDqPEG 275
Cdd:COG3539    32 VVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGtsNSVKVTFTGTADS--ANPGLLANTG-SGG 108

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 276 ASGLGVQILSAGGALVPLNQVSQVWSGNkgSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:COG3539   109 ASGVGIQLLDSDGTPIPLGTPSSAVTLT--SNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
198-341 3.88e-34

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 123.23  E-value: 3.88e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 198 VKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENV--GSVFMQFNAMVDSavAANEVIKIDDqPEG 275
Cdd:COG3539    32 VVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGtsNSVKVTFTGTADS--ANPGLLANTG-SGG 108

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 276 ASGLGVQILSAGGALVPLNQVSQVWSGNkgSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:COG3539   109 ASGVGIQLLDSDGTPIPLGTPSSAVTLT--SNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 197-340 2.40e-16

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 76.15  E-value: 2.40e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 197 QVKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNC-ENVGSVFMQFNAMVDSAVAANEVIKI---DDQ 272
Cdd:PRK15289   33 EIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCpATYTQAAVRFDGTEAPGGDGDLKVGTpltAGN 112

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 273 PEGASGLGVQILSAGGALVPLNQV--SQVWSGNKGSQT------NYRLSYQARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK15289  113 PGDFTGTGQAIAATGVGIRIFNQSdnSQVKLYNDSAYTaidaegKAEMKFIARYVATNATVTAGTANADSQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
196-341 1.02e-14

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 70.54  E-value: 1.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 196 IQVKSPTCKITDDSKNiNVFLGRHNKTAFTGLNSTTAPVPFNINLtNCENVG---SVFMQFNAMVDSAVAanEVIKIDDQ 272
Cdd:pfam00419   7 VTRVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSsavKVTVGLFGTADASSP--NLLLTGNG 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 273 PEGASGLGVQILSAGGALVPLNQVSQVWSGNKGSQTNYRLSYQARYIQT-QPAVTAGEANASATFVVTYN 341
Cdd:pfam00419  83 AGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
198-341 3.88e-34

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 123.23  E-value: 3.88e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 198 VKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENV--GSVFMQFNAMVDSavAANEVIKIDDqPEG 275
Cdd:COG3539    32 VVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGtsNSVKVTFTGTADS--ANPGLLANTG-SGG 108

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 276 ASGLGVQILSAGGALVPLNQVSQVWSGNkgSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:COG3539   109 ASGVGIQLLDSDGTPIPLGTPSSAVTLT--SNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 197-340 2.40e-16

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 76.15  E-value: 2.40e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 197 QVKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNC-ENVGSVFMQFNAMVDSAVAANEVIKI---DDQ 272
Cdd:PRK15289   33 EIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCpATYTQAAVRFDGTEAPGGDGDLKVGTpltAGN 112

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 273 PEGASGLGVQILSAGGALVPLNQV--SQVWSGNKGSQT------NYRLSYQARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK15289  113 PGDFTGTGQAIAATGVGIRIFNQSdnSQVKLYNDSAYTaidaegKAEMKFIARYVATNATVTAGTANADSQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
196-341 1.02e-14

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 70.54  E-value: 1.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 196 IQVKSPTCKITDDSKNiNVFLGRHNKTAFTGLNSTTAPVPFNINLtNCENVG---SVFMQFNAMVDSAVAanEVIKIDDQ 272
Cdd:pfam00419   7 VTRVPATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSsavKVTVGLFGTADASSP--NLLLTGNG 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 273 PEGASGLGVQILSAGGALVPLNQVSQVWSGNKGSQTNYRLSYQARYIQT-QPAVTAGEANASATFVVTYN 341
Cdd:pfam00419  83 AGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATtGGTPTAGDFNATATIVVDYQ 152
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 183-340 4.24e-14

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 69.36  E-value: 4.24e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 183 GVQAM--RFSVSGlciQVKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENVGS-VFMQFNAMVDS 259
Cdd:PRK15191   17 GVQAHdgRVYVSG---TITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASgVTVSFSGAADS 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 260 avAANEVIKIDDQPEGASGLGVQILSAGGALVPLNQVSQVWSGNKGsQTNYRLSYQARYIQTQPAVTAGEANASATFVVT 339
Cdd:PRK15191   94 --RNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPG-QASAHLQFYARYLADGGAVTPGDANASATFILA 170


                  .
gi 1082303959 340 Y 340
Cdd:PRK15191  171 Y 171
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 198-341 3.12e-13

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 66.92  E-value: 3.12e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 198 VKSPtCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCE--NVGSVFMQFNAMVDSAVAanEVIKIDDQPEG 275
Cdd:PRK15209   35 VDAP-CVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDitTNKKVNVSFNGVGDADDS--TLVSVSTEAGA 111

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 276 ASGLGVQILSAGGALVPLNQVSQVWSGNKGSQTNYrlsYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:PRK15209  112 ATGVGIGIYDNANTLVELNTGKSTTTLAAGQTVLY---FTANYVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
190-340 4.98e-13

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 66.52  E-value: 4.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 190 SVSGLCIQVK----SPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENV--GSVFMQFNAMVDSAVAA 263
Cdd:PRK15194   29 SVDGGTIHFEgelvNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPVvaATAAVAFSGQADATNDN 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 264 NEVIKIDDQPEGASGLGVQILSAGGAlvPLNQVSQVWSGNK----GSQTnyrLSYQARYIQTQPAVTAGEANASATFVVT 339
Cdd:PRK15194  109 LLAVASSTNTTTATGVGIEILDNTSS--ILKPDGATFSANQnlieGTNT---LHFSARYKATGTSASAGQANADATFIMK 183


                  .
gi 1082303959 340 Y 340
Cdd:PRK15194  184 Y 184
PRK09934 PRK09934
fimbriae assembly protein;
202-341 4.95e-12

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 63.37  E-value: 4.95e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 202 TCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENvGSVFMQFNAmvdSAVAANEVIKIDDqPEGASGLGV 281
Cdd:PRK09934   39 TCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP-GSASITFTG---TPASDTNLLALDD-PAMAQTVAI 113

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 282 QILSAGGALVPLNQVSQVWSGNkgSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:PRK09934  114 EIRDSDRSRLALGQASPTVEVD--ANGNATLNFYANYIALADGVQPGVAKADATFMINYN 171
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 191-341 4.33e-11

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 60.88  E-value: 4.33e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 191 VSGLciqVKSPTCKITDDSknINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCE-NV-GSVFMQFNAMVDSAVAAneVIK 268
Cdd:PRK15300   33 ITGL---IKQNACTVKTDS--VEVTLQEEFASLFTAAGQTAGDTDFTIELENCDaNVySSVQARFEGTLDGTDAT--ILK 105

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1082303959 269 IDDQpegASGLGVQILSAGGALVPLNQVsQVWSG-----NKGSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:PRK15300  106 NEDD---AENIGVQILDKTSTPMTFNDL-QAWSAavalpTAEGVTELSMPFTARYIATAVPVKSGTVDATATFYLQYN 179
PRK15292 PRK15292
type 1 fimbrial protein;
182-341 3.28e-09

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 57.65  E-value: 3.28e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 182 GGVQAMRFSVSGLCIQVKSPTCKItdDSKNINVFLGRHNKTAFTglNSTTAPVPFNINLTNCENVGSVFMQFNAMVDSA- 260
Cdd:PRK15292  178 GGDILSHLYLGNTQLIMKAMGCRV--ETPALTFDMGSINAGSFA--NSQTVGTAEQDILLSCEPGTNVSASVSAQPASGd 253

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 261 VAANEVIKIDDQ--PEGASGLGVQI-------LSAGGALvPLNQ------VSQVWSGNKGSQTNYR-------------- 311
Cdd:PRK15292  254 NPDNTVIALSNAsaPTSATGVGVQLniqapdaGFFTDSL-PINTkidlftSTRTTNADGSQTVSYSyftnpdspggamnm 332

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1082303959 312 ---LSYQARYIQTQPAVTAGEANASATFVVTYN 341
Cdd:PRK15292  333 sttLKISANYYKTGATVTAGQANATGTLTLTYN 365
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 202-340 1.57e-07

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 50.85  E-value: 1.57e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 202 TCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNC-ENVGSVFMQFNAMVDSAVAAneVIKIDDQPEG----- 275
Cdd:PRK15190   40 TCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCsRGIAGAKIWFTGEPDPDNPA--LLAITDTGMGsgnml 117

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 276 ASGLGVQILSAGGALVPLNQV-SQVWSGNKGSQTnyrLSYQARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK15190  118 ASGVGVEILNDDQDTISINNAdSVVYPLKAGRNT---LSFYIRYKSTRPTVTSGNATAVMYFDMQY 180
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 181-340 2.24e-07

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 50.24  E-value: 2.24e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 181 LGGVQAMRFSvsglcIQVKSPTCKITDDSKNINVFLGRHNKTAFTG--LNsttaPVPFNINLTNCENVGSVFMQFNAMVD 258
Cdd:PRK15205   26 LGPAGDIHFT-----ITIKAKACELEKDSLEVDMGTMVLQKPVKVGteLN----QKNFSIGLKDCDGISKASVTMDGSPD 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 259 SAvaANEVIKIDdqPEGASGLGVQILSAGGAlvplNQVSQVWSGN------KGSQTNyRLSYQARYIQTQPAVTAGEANA 332
Cdd:PRK15205   97 PD--DPSLFALD--AGGATGVALKIKTSKGT----QQYPKSTDGTpvewaiNGDGTT-QLNYIASYVPVNADATVGTANA 167


                  ....*...
gi 1082303959 333 SATFVVTY 340
Cdd:PRK15205  168 TVNFSVTY 175
PRK15210 PRK15210
fimbrial protein;
200-340 2.73e-06

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 47.39  E-value: 2.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 200 SPtCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNC-------ENVGSVFMQFNAMVDSAVAANEVIKIDDQ 272
Cdd:PRK15210   46 SP-CDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnipDTAGSAGKMSKVTVSFSGTANTSKKAYTT 124

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1082303959 273 PEGASGLGVQILSAGGALV-------PLNQVSQVWSGNKgsqtnyRLSYQARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK15210  125 SGSAQHVGVQLLKSDNTSIiepntpmPDGDAQQLQAGNN------ELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15293 PRK15293
fimbrial protein SthD;
158-340 8.95e-06

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 45.82  E-value: 8.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 158 IADNGGLPPPGEYCLNDYLGDIYlGGVQAMRFSVSGLCIqvkSPTCKITDDSkniNVFLGRHNKTAFTGLNSTTAPVPFN 237
Cdd:PRK15293    7 AALAALLTFTGLALWSPSISAAY-NTADAVDINVTGLIY---ADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFT 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 238 INLTNC-ENVGSVFMQFNAMVDSAVAANEVIKIDDQPEGASGLGVQILSAGG-ALVPL-NQVSQVWSGNKGSQTNyRLSY 314
Cdd:PRK15293   80 IKMTNCpATTTKAAISFNGVPYPDPNYASAIYANSAANPAQDLGLQLFNLDGkSLVNLaNNVTYTVDINSNTHEA-NLPV 158

                         170       180
                  ....*....|....*....|....*.
gi 1082303959 315 QARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK15293  159 AARMYTPYGKVTAGDFTSVVTITIAW 184
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 198-341 2.70e-04

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 41.57  E-value: 2.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 198 VKSPTCKIT------DDSKNINVFLGRHNKTAF---TGLNSTTAPVPFNINLTNCEN--VGSVFMQFNAMVDSAVAANEV 266
Cdd:PRK15307   37 VTNNTCNISldnkidQDGNDFDITLPTVFVKDFataLGVNSTLGEKQFTLNLSECDNatLKDASAQFNSWGGSSATSGGL 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 267 IKIDDQPEGASGLGVQILSAGGALV--------PLNQVSQVWSGNKGSQTNYRLSYQARYIQTQPA--VTAGEANASATF 336
Cdd:PRK15307  117 LVPPANLQGSATNVNLVLANNGNTAtdlikidqPNNTQKATISTDGTGDLFYRVAYTQGQKWNADTspVTSGTVQAQVAF 196


                  ....*
gi 1082303959 337 VVTYN 341
Cdd:PRK15307  197 TMIYN 201
PRK09733 PRK09733
fimbrial-like protein;
197-340 5.27e-04

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 40.32  E-value: 5.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 197 QVKSPTCKITDDSKNINVFLGrhnKTAFTGLNS--TTAPVPFNINLTNC---------ENVGSVFMQFNAMV-DSAVAAN 264
Cdd:PRK09733   33 EVISAPCSIKPGDEDLTVNLG---EVADTVLKSdqKSLAEPFTIHLQDCmlsqggttySKAKVTFTTANTMTgQSDLLKN 109

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1082303959 265 eviKIDDQPEGASGLGVQILSAGGALVPLNQVSQVWSGNKGSQTnyRLSYQARYIQTQPAVTAGEANASATFVVTY 340
Cdd:PRK09733  110 ---TKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQ--ELNFKARMESPSKDATPGNVYAQADYKIAY 180
PRK15296 PRK15296
fimbrial protein SthA;
197-340 4.28e-03

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 37.76  E-value: 4.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 197 QVKSPTCKIT-DDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINLTNCENVGS-----VFMQFNAMVDSAVAANEVIKID 270
Cdd:PRK15296   31 KIYDQACTVQvNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTgvptqAMFRFHGATDDSNPTYFKNADE 110

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1082303959 271 DQPEGASGLGVQILSAGGALVPLNQ-VSQVWSGNKGSQTNYrlSYQARYIQTQPA-VTAGEANASATFVVTY 340
Cdd:PRK15296  111 GSETGAAGVGISIQNASHSDVTDNTdDAAVNLPTDGSTADF--TYYAAMANDGSAtVTGGDVSTQVTYTVSY 180
PRK09723 PRK09723
fimbrial-like adhesin;
187-340 9.41e-03

fimbrial-like adhesin;


Pssm-ID: 236617  Cd Length: 421  Bit Score: 37.46  E-value: 9.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 187 MRFSVSGLCIQVKSPTCK---ITDDS-KNINVFLGRHNKTAFTglNSTTaPVPFNINLTNCENVGSvfmqfnamVDSAVA 262
Cdd:PRK09723  245 LKIDFDLTNLKLTNPTCFtsaLSGTSvTGSTVKMGEYSAEQIK--NGAT-PVPFDISLQNCVRVRN--------IETKLV 313

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1082303959 263 ANEVIKIDDQ--------PEGASGLGVQI------LSAGGALVPlNQVSQVWS---------------GNKGSQTNYRLS 313
Cdd:PRK09723  314 STKVGTENKQllgntltgNDAAKGVGVLIeglknsKSPQMTLKP-NDSTSVYKdyetpdeddttggiyPDQGNGTTQPLH 392

                         170       180
                  ....*....|....*....|....*...
gi 1082303959 314 YQARYIQT-QPAVTAGEANASATFVVTY 340
Cdd:PRK09723  393 FQATLKQDgNIAIEPGEFKATSTFQVTY 420
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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