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Conserved domains on  [gi|1079485400|ref|YP_009305754|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Callaeas cinereus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.69e-41

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.74  E-value: 2.69e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.69e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.74  E-value: 2.69e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.42e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 11 AFTACSLGLAFHRtHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 1079485400 91 HNFNLLRC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 16-97 1.82e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 36.97  E-value: 1.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 16 SLGL--AFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHNF 93
Cdd:COG0713   15 AIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRGTIDVDDL 94


                 ....
gi 1079485400 94 NLLR 97
Cdd:COG0713   95 NELK 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.69e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.74  E-value: 2.69e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 8.68e-39

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 124.72  E-value: 8.68e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.01e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 122.00  E-value: 1.01e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.44e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 84.98  E-value: 4.44e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 1.70e-21

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 80.76  E-value: 1.70e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  4 LHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 1079485400 84 THGSDHLHNFNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.42e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 11 AFTACSLGLAFHRtHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 1079485400 91 HNFNLLRC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 1.48e-14

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 63.01  E-value: 1.48e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1079485400 81 STRTHGSDHLHNFNLLR 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 18-98 9.80e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 9.80e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 18 GLAFHRTHLISALLCLEGMMLSMYVALAMWPiqTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHNFNLLR 97
Cdd:MTH00188  19 TFLLNRKHLLMLLLSLEAIMLSLFWFLLVGL--SYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLIK 96


                 .
gi 1079485400 98 C 98
Cdd:MTH00188  97 C 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.07e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 47.92  E-value: 1.07e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMYVAlaMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVM--MFSSSGLISFSSYLFLIILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 1.57e-07

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 45.13  E-value: 1.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400  1 MSVLHLSFYSAFTACSLGLAFHRTHLISALLCLEGMMLSMyVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVA 80
Cdd:MTH00013   1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSL-ALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 1079485400 81 STRTHGSDHLHNFNLLRC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 21-92 1.04e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 42.83  E-value: 1.04e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1079485400 21 FHRTHLISALLCLEGMMLSMYVALAMWPIQTQtpSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHN 92
Cdd:MTH00162  20 SKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFN--YELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 17-97 1.28e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 42.71  E-value: 1.28e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 17 LGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHNFNLL 96
Cdd:MTH00180  18 LGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVKSLNLL 97


                 .
gi 1079485400 97 R 97
Cdd:MTH00180  98 R 98
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 16-97 5.66e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 38.51  E-value: 5.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 16 SLGLAFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHNFNL 95
Cdd:MTH00001  17 IWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLKSLNS 96


                 ..
gi 1079485400 96 LR 97
Cdd:MTH00001  97 LR 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 16-97 1.82e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 36.97  E-value: 1.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400 16 SLGL--AFHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALLVASTRTHGSDHLHNF 93
Cdd:COG0713   15 AIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRGTIDVDDL 94


                 ....
gi 1079485400 94 NLLR 97
Cdd:COG0713   95 NELK 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-97 3.81e-04

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 36.31  E-value: 3.81e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1079485400   1 MSVLHLSFYSAFTACsLGLA--FHRTHLISALLCLEGMMLSMYVALAMWPIQTQTPSSSLLPMLMLTFSACEAGTGLALL 78
Cdd:PRK05715    2 IPLQHYLILAAILFC-IGLVglLLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                          90
                  ....*....|....*....
gi 1079485400  79 VASTRTHGSDHLHNFNLLR 97
Cdd:PRK05715   81 LQLYRNRGTIDVDDLNELK 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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