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trihelix transcription factor ENAP1-like isoform X7 [Raphanus sativus]
myb/SANT-like DNA-binding domain-containing protein( domain architecture ID 10619758)
nyb/SANT (SWI3, ADA2, N-CoR and TFIIIB)-like DNA-binding domain-containing protein may bind DNA and function as a transcription factor
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
29-112 | 6.17e-11 | |||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. : Pssm-ID: 463994 Cd Length: 84 Bit Score: 57.28 E-value: 6.17e-11
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Name | Accession | Description | Interval | E-value | |||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
29-112 | 6.17e-11 | |||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. Pssm-ID: 463994 Cd Length: 84 Bit Score: 57.28 E-value: 6.17e-11
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MADF | smart00595 | subfamily of SANT domain; |
40-116 | 8.58e-04 | |||
subfamily of SANT domain; Pssm-ID: 214738 Cd Length: 89 Bit Score: 37.72 E-value: 8.58e-04
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Name | Accession | Description | Interval | E-value | |||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
29-112 | 6.17e-11 | |||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. Pssm-ID: 463994 Cd Length: 84 Bit Score: 57.28 E-value: 6.17e-11
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MADF | smart00595 | subfamily of SANT domain; |
40-116 | 8.58e-04 | |||
subfamily of SANT domain; Pssm-ID: 214738 Cd Length: 89 Bit Score: 37.72 E-value: 8.58e-04
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MADF_DNA_bdg | pfam10545 | Alcohol dehydrogenase transcription factor Myb/SANT-like; The myb/SANT-like domain in Adf-1 ... |
40-116 | 7.83e-03 | |||
Alcohol dehydrogenase transcription factor Myb/SANT-like; The myb/SANT-like domain in Adf-1 (MADF) is an approximately 80-amino-acid module that directs sequence specific DNA binding to a site consisting of multiple tri-nucleotide repeats. The MADF domain is found in one or more copies in eukaryotic and viral proteins and is often associated with the BESS domain. It is likely that the MADF domain is more closely related to the myb/SANT domain than it is to other HTH domains. Pssm-ID: 463144 Cd Length: 84 Bit Score: 34.57 E-value: 7.83e-03
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Blast search parameters | ||||
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