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MULTISPECIES: type II toxin-antitoxin system RelB family antitoxin [Exiguobacterium]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
DUF6290 | pfam19807 | Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, ... |
1-71 | 5.01e-23 | ||
Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, they are predominantly found in bacteria but also in viruses. Proteins in this family are approximately 80 amino acids in length and presumably contain a ribbon-helix-helix DNA-binding motif. : Pssm-ID: 437639 Cd Length: 72 Bit Score: 82.99 E-value: 5.01e-23
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Name | Accession | Description | Interval | E-value | ||
DUF6290 | pfam19807 | Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, ... |
1-71 | 5.01e-23 | ||
Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, they are predominantly found in bacteria but also in viruses. Proteins in this family are approximately 80 amino acids in length and presumably contain a ribbon-helix-helix DNA-binding motif. Pssm-ID: 437639 Cd Length: 72 Bit Score: 82.99 E-value: 5.01e-23
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COG4710 | COG4710 | Predicted DNA-binding protein with an HTH domain [General function prediction only]; |
1-74 | 4.25e-09 | ||
Predicted DNA-binding protein with an HTH domain [General function prediction only]; Pssm-ID: 443745 Cd Length: 76 Bit Score: 47.59 E-value: 4.25e-09
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RHH_MobB-like | cd22234 | ribbon-helix-helix domain of mobilization protein MobB and similar proteins; This subfamily ... |
4-42 | 5.18e-03 | ||
ribbon-helix-helix domain of mobilization protein MobB and similar proteins; This subfamily includes Pseudomonas syringae mobilization protein MobB, and mostly archaeal uncharacterized CopG family proteins. These proteins have a typical ribbon-helix-helix (RHH), similar to plasmid-encoded transcriptional repressor CopG, the protein that is encoded by the promiscuous streptococcal plasmid pMV158 and is involved in the control of plasmid copy number. Pssm-ID: 409024 Cd Length: 44 Bit Score: 31.46 E-value: 5.18e-03
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Name | Accession | Description | Interval | E-value | ||
DUF6290 | pfam19807 | Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, ... |
1-71 | 5.01e-23 | ||
Family of unknown function (DUF6290); This family of proteins is functionally uncharacterized, they are predominantly found in bacteria but also in viruses. Proteins in this family are approximately 80 amino acids in length and presumably contain a ribbon-helix-helix DNA-binding motif. Pssm-ID: 437639 Cd Length: 72 Bit Score: 82.99 E-value: 5.01e-23
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COG4710 | COG4710 | Predicted DNA-binding protein with an HTH domain [General function prediction only]; |
1-74 | 4.25e-09 | ||
Predicted DNA-binding protein with an HTH domain [General function prediction only]; Pssm-ID: 443745 Cd Length: 76 Bit Score: 47.59 E-value: 4.25e-09
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RHH_MobB-like | cd22234 | ribbon-helix-helix domain of mobilization protein MobB and similar proteins; This subfamily ... |
4-42 | 5.18e-03 | ||
ribbon-helix-helix domain of mobilization protein MobB and similar proteins; This subfamily includes Pseudomonas syringae mobilization protein MobB, and mostly archaeal uncharacterized CopG family proteins. These proteins have a typical ribbon-helix-helix (RHH), similar to plasmid-encoded transcriptional repressor CopG, the protein that is encoded by the promiscuous streptococcal plasmid pMV158 and is involved in the control of plasmid copy number. Pssm-ID: 409024 Cd Length: 44 Bit Score: 31.46 E-value: 5.18e-03
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Blast search parameters | ||||
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