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Conserved domains on  [gi|1070638090|ref|YP_009302365|]
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FtsK-like DNA translocase [Mycobacterium phage Xeno]

Protein Classification

Ftsk_gamma domain-containing protein( domain architecture ID 10559393)

Ftsk_gamma domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 277-336 3.34e-20

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


:

Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 82.80  E-value: 3.34e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070638090 277 DWDAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:pfam09397   2 EEDELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVL 61
 
Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 277-336 3.34e-20

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 82.80  E-value: 3.34e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070638090 277 DWDAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:pfam09397   2 EEDELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVL 61
Ftsk_gamma smart00843
This domain directs oriented DNA translocation and forms a winged helix structure; Mutated ...
 279-336 5.84e-18

This domain directs oriented DNA translocation and forms a winged helix structure; Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 197911 [Multi-domain]  Cd Length: 63  Bit Score: 77.07  E-value: 5.84e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1070638090  279 DAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:smart00843   4 DELYDEAVELVIETQKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPANGSKPREVL 61
FtsK COG1674
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ...
 279-336 1.14e-17

DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441280 [Multi-domain]  Cd Length: 611  Bit Score: 84.21  E-value: 1.14e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1070638090 279 DAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:COG1674   545 DELFDEAVELVVETQKASTSLLQRRLRIGYNRAARLIDQMEERGIVGPAEGSKPREVL 602
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 268-329 3.37e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 3.37e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1070638090  268 GEVAGQMELDwdAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEaQG 329
Cdd:PRK10263  1283 GGFDGAEELD--PLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSE-QG 1341
 
Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 277-336 3.34e-20

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 82.80  E-value: 3.34e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070638090 277 DWDAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:pfam09397   2 EEDELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVL 61
Ftsk_gamma smart00843
This domain directs oriented DNA translocation and forms a winged helix structure; Mutated ...
 279-336 5.84e-18

This domain directs oriented DNA translocation and forms a winged helix structure; Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 197911 [Multi-domain]  Cd Length: 63  Bit Score: 77.07  E-value: 5.84e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1070638090  279 DAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:smart00843   4 DELYDEAVELVIETQKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPANGSKPREVL 61
FtsK COG1674
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ...
 279-336 1.14e-17

DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441280 [Multi-domain]  Cd Length: 611  Bit Score: 84.21  E-value: 1.14e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1070638090 279 DAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEAQGSMARPVY 336
Cdd:COG1674   545 DELFDEAVELVVETQKASTSLLQRRLRIGYNRAARLIDQMEERGIVGPAEGSKPREVL 602
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 268-329 3.37e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 3.37e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1070638090  268 GEVAGQMELDwdAQLRKAIELVVESQMGSASMLQYKLDVGFARAQRLLDEMEALGIVGEaQG 329
Cdd:PRK10263  1283 GGFDGAEELD--PLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSE-QG 1341
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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