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Conserved domains on  [gi|1064270248|gb|ODV44510|]
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hypothetical protein AWV79_07410 [Cupriavidus sp. UYMMa02A]

Protein Classification

DUF2891 domain-containing protein( domain architecture ID 10567833)

DUF2891 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF2891 pfam11199
Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.
14-334 9.97e-160

Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.


:

Pssm-ID: 431720  Cd Length: 324  Bit Score: 449.70  E-value: 9.97e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  14 FARVALENIGRRYPYKVDHMVTGPDELLDPAVLHPVFCGSYDWHSSVHMHWMLVRLLGLWPDLDNAMQIRDTLDGQFRPE 93
Cdd:pfam11199   2 FARLALGCITREYPNKLGHVLNGPDDLKPPRELHPAFYGCFDWHSSVHGHWLLVRLLRLFPDLPEAAEIRAVLDRHLTPE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  94 AIRTELAYFQRPASRTFERPYGWAWLLRLQAELQSAgeNDVQAARWADSCAPLARHLAGQLVDYLDVADFPVRTGTHLNS 173
Cdd:pfam11199  82 NIAGEVAYFQRPPNRSFERPYGWAWLLKLAAELRTW--DDPQAKRWAAALQPLADLIVERFKDFLPKLTYPIRVGTHPNT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 174 AFALIMALSYARTDQHLALRRAIVRRAHRWFGHDQRYPARYEPGGDEFLSGGLTEAVLMHAVMDGCAFAEWWELFAPGRA 253
Cdd:pfam11199 160 AFALGLALDYARATGDAALEELIVERALRWYADDRDCPAWWEPSGDDFLSPALEEADLMRRVLPPEEFAAWLDAFLPDLA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 254 EL--ANWLTPVAVADRSDPKMSHLDGLNLSRAWCWRMLEPALPED--LRPLAVRTWSDHLEASLAQAIHGDYVATHWLAS 329
Cdd:pfam11199 240 EGepATLLTPAVVSDRTDGKIAHLDGLNLSRAWCLRGLAAALPEGdpRRALLRAAAERHLAAGLPHVVGGDYMGEHWLAS 319

                  ....*
gi 1064270248 330 FAVLA 334
Cdd:pfam11199 320 FALYA 324
 
Name Accession Description Interval E-value
DUF2891 pfam11199
Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.
14-334 9.97e-160

Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431720  Cd Length: 324  Bit Score: 449.70  E-value: 9.97e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  14 FARVALENIGRRYPYKVDHMVTGPDELLDPAVLHPVFCGSYDWHSSVHMHWMLVRLLGLWPDLDNAMQIRDTLDGQFRPE 93
Cdd:pfam11199   2 FARLALGCITREYPNKLGHVLNGPDDLKPPRELHPAFYGCFDWHSSVHGHWLLVRLLRLFPDLPEAAEIRAVLDRHLTPE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  94 AIRTELAYFQRPASRTFERPYGWAWLLRLQAELQSAgeNDVQAARWADSCAPLARHLAGQLVDYLDVADFPVRTGTHLNS 173
Cdd:pfam11199  82 NIAGEVAYFQRPPNRSFERPYGWAWLLKLAAELRTW--DDPQAKRWAAALQPLADLIVERFKDFLPKLTYPIRVGTHPNT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 174 AFALIMALSYARTDQHLALRRAIVRRAHRWFGHDQRYPARYEPGGDEFLSGGLTEAVLMHAVMDGCAFAEWWELFAPGRA 253
Cdd:pfam11199 160 AFALGLALDYARATGDAALEELIVERALRWYADDRDCPAWWEPSGDDFLSPALEEADLMRRVLPPEEFAAWLDAFLPDLA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 254 EL--ANWLTPVAVADRSDPKMSHLDGLNLSRAWCWRMLEPALPED--LRPLAVRTWSDHLEASLAQAIHGDYVATHWLAS 329
Cdd:pfam11199 240 EGepATLLTPAVVSDRTDGKIAHLDGLNLSRAWCLRGLAAALPEGdpRRALLRAAAERHLAAGLPHVVGGDYMGEHWLAS 319

                  ....*
gi 1064270248 330 FAVLA 334
Cdd:pfam11199 320 FALYA 324
 
Name Accession Description Interval E-value
DUF2891 pfam11199
Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.
14-334 9.97e-160

Protein of unknown function (DUF2891); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431720  Cd Length: 324  Bit Score: 449.70  E-value: 9.97e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  14 FARVALENIGRRYPYKVDHMVTGPDELLDPAVLHPVFCGSYDWHSSVHMHWMLVRLLGLWPDLDNAMQIRDTLDGQFRPE 93
Cdd:pfam11199   2 FARLALGCITREYPNKLGHVLNGPDDLKPPRELHPAFYGCFDWHSSVHGHWLLVRLLRLFPDLPEAAEIRAVLDRHLTPE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248  94 AIRTELAYFQRPASRTFERPYGWAWLLRLQAELQSAgeNDVQAARWADSCAPLARHLAGQLVDYLDVADFPVRTGTHLNS 173
Cdd:pfam11199  82 NIAGEVAYFQRPPNRSFERPYGWAWLLKLAAELRTW--DDPQAKRWAAALQPLADLIVERFKDFLPKLTYPIRVGTHPNT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 174 AFALIMALSYARTDQHLALRRAIVRRAHRWFGHDQRYPARYEPGGDEFLSGGLTEAVLMHAVMDGCAFAEWWELFAPGRA 253
Cdd:pfam11199 160 AFALGLALDYARATGDAALEELIVERALRWYADDRDCPAWWEPSGDDFLSPALEEADLMRRVLPPEEFAAWLDAFLPDLA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1064270248 254 EL--ANWLTPVAVADRSDPKMSHLDGLNLSRAWCWRMLEPALPED--LRPLAVRTWSDHLEASLAQAIHGDYVATHWLAS 329
Cdd:pfam11199 240 EGepATLLTPAVVSDRTDGKIAHLDGLNLSRAWCLRGLAAALPEGdpRRALLRAAAERHLAAGLPHVVGGDYMGEHWLAS 319

                  ....*
gi 1064270248 330 FAVLA 334
Cdd:pfam11199 320 FALYA 324
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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