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Conserved domains on  [gi|1063696747|ref|NP_001323128|]
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Serine/threonine-protein kinase WNK (With No Lysine)-like protein [Arabidopsis thaliana]

Protein Classification

bHLH-MYC_N domain-containing protein( domain architecture ID 10624805)

bHLH-MYC_N domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
bHLH-MYC_N pfam14215
bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a ...
 16-165 6.21e-20

bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a family of MYB and MYC transcription factors. The DNA-binding HLH domain is further downstream, pfam00010. Members of the MYB and MYC family regulate the biosynthesis of phenylpropanoids in several plant species (DOI:10.1007/s11295-009-0232-y).


:

Pssm-ID: 464106  Cd Length: 121  Bit Score: 84.19  E-value: 6.21e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  16 SRGNRRNWILVWEDGFCNFAASAAEmssgegsgggggsaaygnsdfqqyqglqpelffkmsheiyNYGEGLIGKVAADHS 95
Cdd:pfam14215  23 SRSQSGRLVLGWGDGYYNGGEEGGK----------------------------------------GKTRGLPGKAFASGK 62

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  96 HKWIYKEpndqeinflsawhNSADSYPRTWEAQfQSGIKTIALISVREGVVQLGAVHKVIEDLSYVVMLR 165
Cdd:pfam14215  63 HIWLTGA-------------DELDYCSRSLLAK-SAGIQTIVCIPVPGGVLELGSTELVPEDLELVQHIK 118
 
Name Accession Description Interval E-value
bHLH-MYC_N pfam14215
bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a ...
 16-165 6.21e-20

bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a family of MYB and MYC transcription factors. The DNA-binding HLH domain is further downstream, pfam00010. Members of the MYB and MYC family regulate the biosynthesis of phenylpropanoids in several plant species (DOI:10.1007/s11295-009-0232-y).


Pssm-ID: 464106  Cd Length: 121  Bit Score: 84.19  E-value: 6.21e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  16 SRGNRRNWILVWEDGFCNFAASAAEmssgegsgggggsaaygnsdfqqyqglqpelffkmsheiyNYGEGLIGKVAADHS 95
Cdd:pfam14215  23 SRSQSGRLVLGWGDGYYNGGEEGGK----------------------------------------GKTRGLPGKAFASGK 62

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  96 HKWIYKEpndqeinflsawhNSADSYPRTWEAQfQSGIKTIALISVREGVVQLGAVHKVIEDLSYVVMLR 165
Cdd:pfam14215  63 HIWLTGA-------------DELDYCSRSLLAK-SAGIQTIVCIPVPGGVLELGSTELVPEDLELVQHIK 118
 
Name Accession Description Interval E-value
bHLH-MYC_N pfam14215
bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a ...
 16-165 6.21e-20

bHLH-MYC and R2R3-MYB transcription factors N-terminal; This is the N-terminal region of a family of MYB and MYC transcription factors. The DNA-binding HLH domain is further downstream, pfam00010. Members of the MYB and MYC family regulate the biosynthesis of phenylpropanoids in several plant species (DOI:10.1007/s11295-009-0232-y).


Pssm-ID: 464106  Cd Length: 121  Bit Score: 84.19  E-value: 6.21e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  16 SRGNRRNWILVWEDGFCNFAASAAEmssgegsgggggsaaygnsdfqqyqglqpelffkmsheiyNYGEGLIGKVAADHS 95
Cdd:pfam14215  23 SRSQSGRLVLGWGDGYYNGGEEGGK----------------------------------------GKTRGLPGKAFASGK 62

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696747  96 HKWIYKEpndqeinflsawhNSADSYPRTWEAQfQSGIKTIALISVREGVVQLGAVHKVIEDLSYVVMLR 165
Cdd:pfam14215  63 HIWLTGA-------------DELDYCSRSLLAK-SAGIQTIVCIPVPGGVLELGSTELVPEDLELVQHIK 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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