NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1046557354|ref|WP_065656767|]
View 

MULTISPECIES: DUF2735 domain-containing protein [Rhizobium/Agrobacterium group]

Protein Classification

DUF2735 domain-containing protein( domain architecture ID 10566912)

DUF2735 domain-containing protein similar to Rhizobium leguminosarum glutamine synthetase translation inhibitor (GstI) that inhibits the synthesis of glutamine synthetase II

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2735 pfam10931
Protein of unknown function (DUF2735); Some members in this family of proteins are annotated ...
 12-61 1.59e-17

Protein of unknown function (DUF2735); Some members in this family of proteins are annotated as glutamine synthetase translation inhibitor however this function can not be confirmed.


:

Pssm-ID: 431540  Cd Length: 52  Bit Score: 68.23  E-value: 1.59e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1046557354 12 TATIYQFPIGGRAGVSKFRN--SGLSDLEREAREPHVDFGSWYHDEAIRDEE 61
Cdd:pfam10931  1 SAKIYQFPVGGRAGLGGRRSeaSLAADLAASAAAPAVFGGSWYHEEAIQEAA 52
 
Name Accession Description Interval E-value
DUF2735 pfam10931
Protein of unknown function (DUF2735); Some members in this family of proteins are annotated ...
 12-61 1.59e-17

Protein of unknown function (DUF2735); Some members in this family of proteins are annotated as glutamine synthetase translation inhibitor however this function can not be confirmed.


Pssm-ID: 431540  Cd Length: 52  Bit Score: 68.23  E-value: 1.59e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1046557354 12 TATIYQFPIGGRAGVSKFRN--SGLSDLEREAREPHVDFGSWYHDEAIRDEE 61
Cdd:pfam10931  1 SAKIYQFPVGGRAGLGGRRSeaSLAADLAASAAAPAVFGGSWYHEEAIQEAA 52
 
Name Accession Description Interval E-value
DUF2735 pfam10931
Protein of unknown function (DUF2735); Some members in this family of proteins are annotated ...
 12-61 1.59e-17

Protein of unknown function (DUF2735); Some members in this family of proteins are annotated as glutamine synthetase translation inhibitor however this function can not be confirmed.


Pssm-ID: 431540  Cd Length: 52  Bit Score: 68.23  E-value: 1.59e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1046557354 12 TATIYQFPIGGRAGVSKFRN--SGLSDLEREAREPHVDFGSWYHDEAIRDEE 61
Cdd:pfam10931  1 SAKIYQFPVGGRAGLGGRRSeaSLAADLAASAAAPAVFGGSWYHEEAIQEAA 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH