|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-737 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1378.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNMVLMGGLRKYVPITRTTFLC 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 481 KGPSKGVNRDFVLSTM--KGGVSFFSQNIPKIPGNTRNKIGSFSTPFEAKNTFVYPHETGNTMLFPLLILLLFTLFIGSI 558
Cdd:CHL00025 481 KEESKKINKLLLLLTMnnNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 559 GIHFDNGIKGngiseLTILSKWLTPSINFFQESSNSSINSYEFLINAISSVSLAILGLFIAYIFYGSTYSFFQNLNFLNS 638
Cdd:CHL00025 561 GIPFNQEGID-----LDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 639 LVKGNPKKNFLDEVKKKIYSWSYNRGYIDVFYTRVFILGIRGLAELTNFFDKGVIDGIINGVGLAGFCIGEEIKSVGGGR 718
Cdd:CHL00025 636 FVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGR 715
|
730
....*....|....*....
gi 1043443886 719 ISSYLFFFLCYVSLFLFFF 737
Cdd:CHL00025 716 ISSYLFLYLFYVSIFLLIL 734
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-737 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 696.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNMVLMGGLRKYVPITRTTFLC 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRvhfqnysSTKEGSLYSISLWG 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFR-------GNDKELQKELLAAA 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 481 KGPSKGVNRDFVLSTMKGGVSffsqnipkipgntrnkigsfstpfeakntfvYPHETGNTMLFPLLILLLFTLFIGSIGI 560
Cdd:PRK07376 474 DAPGHHEGHHEEHGEHHHHSG-------------------------------SPHESPWTMTLPLVVLAVPSVLIGLLGT 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 561 HFDNGIKGngiseltilskWLTPSINFFQESSNSSINsyEFLINAISSVSLAILGLFIAYIFYGStysffqnlnflnslv 640
Cdd:PRK07376 523 PWNNRFEA-----------FLHAPGEALEAAAHFEWG--EFLILAGASVGIALIGITLASLMYLL--------------- 574
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 641 kgnpKKNFLDEVKKK---IYSWSYNRGYIDVFYTRVFILGIRGLAELTNFFDKGVIDGIINGVGLAGFCIGEEIKSVGGG 717
Cdd:PRK07376 575 ----KKIDPAAIAERfppLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENG 650
|
730 740
....*....|....*....|
gi 1043443886 718 RISSYLFFFLCYVSLFLFFF 737
Cdd:PRK07376 651 RAQFYALIVFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-736 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 575.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 5 YQYAWVIPLLPLpvimsmgFGLFLIPTATKNLRRIWAF-PSILLLSIALVFSVHLSIQQINGSsIYQYLWSWTINNDFSL 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLGGE-VVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 84 EFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 164 FWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNnGINSLLTTLCAFLLFLGAVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL----AAAPT-ILSSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 324 MSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMEslvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 404 SLCGIPPLACFWSKDEILSNSW---LYSPFFGIIASFTAGLTAFYMFRIYLLTFdgylrvhfqnysstkegslysislWG 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 481 KGPSKgvnrdfvlstmkggvsffsqnipkipgntrnkigsfstpfeaknTFVYPHETGNTMlfpllILLLFTLFIGSIGI 560
Cdd:COG1009 435 KPRPK--------------------------------------------TPKHPHESPWLM-----TLPLVVLAVLSLVL 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 561 hfdngikgnGISELTILSKWLTPSINFFQESSnssiNSYEFLINAISSVsLAILGLFIAYIFYgstysffqnlnflnsLV 640
Cdd:COG1009 466 ---------GLLLPGLLEGLLAPAAVLGGELH----LAHGLLLNALPLL-LSLLGIALGYLLY---------------LK 516
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 641 KGNPKknfLDEVKKKIYSWSYNRGYIDVFYTRVFILGIRGLAELtNFFDKGVIDGIINGVGLAGFCIGEEIKSVGGGRIS 720
Cdd:COG1009 517 RPLPA---LAERLKPLYRLLANKWYFDELYDALFVKPVRALARF-LWFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQ 592
|
730
....*....|....*.
gi 1043443886 721 SYLFFFLCYVSLFLFF 736
Cdd:COG1009 593 FYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-727 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 551.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 7 YAWVIPLLPLpvimsMGFGLFLIptatkNLRRIWAFPS----ILLLSIALVFSVHLSIQ--QINGSSIYQYLWSWTINND 80
Cdd:PRK06590 4 LLWLIVLLPL-----IGALILGL-----FGRRIGEKWAhlvgTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK06590 74 FDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnnGINSLLTTLCAFLLFLGAVAK 240
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFF---GLGWSALTLICLLLFIGAMGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLA 320
Cdd:PRK06590 231 SAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspDKSQNMVLMGGLRKYVPITRTTFLC 400
Cdd:PRK06590 311 YSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 401 GTLSLCGIPPLACFWSKDEILSNSW-LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGylrvhfqnysstkegslysislw 479
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAFaNGHINLFVAGLVGAFLTAFYSFRLIFLVFHG----------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 480 gkgpskgvnrdfvlstmkggvsffsqnipkipgntrnkigsfstpfEAKNTFVYPHETGNTMlfpllILLLFTLFIGSIG 559
Cdd:PRK06590 440 ----------------------------------------------KEKEKIHHPHESPAVM-----TLPLIVLAVLSVF 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 560 IHFdngikgngiseltILSKWLTPSINFFQESSNSSINSYEFLINAISSVSLAILGLFIAYIFYGSTYSFFQNLNFLNSL 639
Cdd:PRK06590 469 AGA-------------LIVPPFLGVLPLTTELAHGEAEHHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRF 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 640 vkgnpkknfldevkkkIYSWSYNRGYIDVFYTRVFILGIRGLAE-LTNFFDKGVIDGIINGVGLAGFCIGEEIKSVGGGR 718
Cdd:PRK06590 536 ----------------LYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNSARLVGGGSRVLRRLQTGY 599
|
....*....
gi 1043443886 719 ISSYLFFFL 727
Cdd:PRK06590 600 LRHYAASML 608
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-727 |
1.94e-157 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 469.46 E-value: 1.94e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 44 SILLLSIALVFSVHLSIQQINGSS---IYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 121 YLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWIT 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 201 GSLEFRDLFKIANNWIPNnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 280
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 361 GSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFT 438
Cdd:TIGR01974 347 GSVIHAMHH--------EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 439 AGLTAFYMFRIYLLTFDGYLRVHfqnysstkegslysislwgkgpskgvnrdfvlstmkggvsffsqnipkipgntrnki 518
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHGKERHE--------------------------------------------------------- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 519 gsfstpfeaknTFVYPHETGNTMLFPLLILLLFTLFIGSIGIHFDNGIKGngiseltilskwltpsiNFFQESSNSSINS 598
Cdd:TIGR01974 442 -----------ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKG-----------------VLPTSAEPALEHH 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 599 YEFLINAISSVSLAILGLFIAYIFYgstysffqnlnflnslVKGNPKKNFLDEVKKKIYSWSYNRGYIDVFYTRVFILGI 678
Cdd:TIGR01974 494 HVPALEIWSPTAVAILGILLAYLLY----------------LGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVKPY 557
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1043443886 679 RGLAELTNFF-DKGVIDGIINGVGLAGFCIGEEIKSVGGGRISSYLFFFL 727
Cdd:TIGR01974 558 LFLGKLLWKDpDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMV 607
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-454 |
5.00e-114 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 357.40 E-value: 5.00e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 63 INGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGIn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 223 sllTTLCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITL 302
Cdd:MTH00210 211 ---TIIC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESlvgyspdkSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSD--------EQDMR 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043443886 383 LMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-472 |
2.83e-111 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 350.15 E-value: 2.83e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 46 LLLSIALVFSVHLSI-----QQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 121 YLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWIT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 201 GSLEFRDLFKIANNwIPNNGInslltTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 280
Cdd:MTH00020 190 GSLDFSSVFNMVVS-APSSDI-----TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 361 GSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFT 438
Cdd:MTH00020 344 GSVIHALSD--------EQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFS 415
|
410 420 430
....*....|....*....|....*....|....
gi 1043443886 439 AGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEGS 472
Cdd:MTH00020 416 ALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGD 449
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-689 |
2.36e-100 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 308.77 E-value: 2.36e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 448 RIYLLTFDGYLRVHFQNYSSTKEGSLYSISLWGKGPSKGVNRDFVL-----STMKGGVSFFSQNIPKIPGNTRNKIGSF- 521
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTlllltMNNNEKVSFFSKKTYRIDGNVRNMTRPFi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 522 -STPFEAKNTFVYPHETGNTMLFPLLILLLFTLFIGSIGIHFDNGIKGngiseLTILSKWLTPSINFFQESSNSSINSYE 600
Cdd:pfam01010 81 tITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGID-----LDILSKWLTPSINLLHKNSNNSVDWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 601 FLINAISSVSLAILGLFIAYIFYGSTYSFFQNLNFLNSLVKGNPKKNFLDEVKKKIYSWSYNRGYIDVFYTRVFILGIRG 680
Cdd:pfam01010 156 FVTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRG 235
|
....*....
gi 1043443886 681 LAELTNFFD 689
Cdd:pfam01010 236 LAELTHFFD 244
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
73-460 |
2.40e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 294.94 E-value: 2.40e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 73 WSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWE 152
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 153 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnngINSLLTTLCAFL 232
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 233 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQ 312
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 313 RDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESlvgyspdkSQNMVLMGGLRKYVP 392
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNN--------EQDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1043443886 393 ITRTTFLCGTLSLCGIPPLACFWSKDEILSNswLYSPFFGIIASFTA----GLTAFYMFRIYLLTFDGYLRV 460
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
1.67e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 289.17 E-value: 1.67e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 10 VIPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVhlsiqQINGSSIYQYLWSWTINNDFSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 170 IAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEF---------RDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAK 240
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLA 320
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGI-GSYEAALFHLITHAYSKALLFLGSGSVIHSMESlvgyspdKSQNMVLMGGLRKYVPITRTTFL 399
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 1043443886 400 CGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
3.56e-87 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 276.12 E-value: 3.56e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 141 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwipNNG 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAL-----TGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 221 INSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLLARLFPLF-ISLPLIMSFISLVG 298
Cdd:pfam00361 76 LNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 299 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYEAALFHLITHAYSKALLFLGSGSVIHSMEslvgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1043443886 376 dKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-456 |
8.59e-83 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 275.25 E-value: 8.59e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 6 QYAWVIPLLPLpvimsMGfGLFLIPTATKNLRRIWAFPS----ILLLSIALVFSVhLSIQQINGSSIYQYLWSWTINNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAaylnLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNGINSLLTTLCAFLLFLGAVAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA----AWAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 322 STMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSmeslvgyspDKSQNMVLMGGLRKYVPITRTTFLCG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1043443886 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
73-461 |
2.18e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 268.57 E-value: 2.18e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 73 WSWTINNDFSLEFGYLIDPLtSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYF 149
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 150 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwIPNNginslLTTLC 229
Cdd:MTH00004 143 GWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF------SPTQ-----TPTLP 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 230 AFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLA 309
Cdd:MTH00004 212 LLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 310 LAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspDKSQNMVLMGGLRK 389
Cdd:MTH00004 292 LTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQK 363
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1043443886 390 YVPITRTTFLCGTLSLCGIPPLACFWSKD---EILSNSWLYSpfFGIIASFTA-GLTAFYMFRIYLLTFDGYLRVH 461
Cdd:MTH00004 364 TLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA--WALLLTLLAtSFTAAYSLRMILLVQTGFPRTP 437
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-454 |
7.58e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 264.91 E-value: 7.58e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 42 FPSILLLSIALVFSVHLSIQQINGS-SIYQYLWSWTINNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDDYMS 116
Cdd:MTH00208 57 FSISLLKTLAFLSLINLLIWILLGCpNINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 117 HDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGF 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 197 FWITGSLEFrdlfkiaNNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL 276
Cdd:MTH00208 213 LINFNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 277 LARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 357 FLGSGSVIHSMeslvgyspDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSP--FFGII 434
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAG-LASIsnLLSII 436
|
410 420
....*....|....*....|.
gi 1043443886 435 ASFTAGL-TAFYMFRIYLLTF 454
Cdd:MTH00208 437 LALIATLlTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
7.97e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 261.38 E-value: 7.97e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 73 WSWTINNDFSLEFGYLIDpLTSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYF 149
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD-QYSIIFLpiaLFVTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 150 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnginsllTTLC 229
Cdd:MTH00066 141 GWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 230 AFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLA 309
Cdd:MTH00066 210 LLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 310 LAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspDKSQNMVLMGGLRK 389
Cdd:MTH00066 290 LTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQK 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1043443886 390 YVPITRTTFLCGTLSLCGIPPLACFWSKDEILS-------NSWlySPFFGIIA-SFtaglTAFYMFRI 449
Cdd:MTH00066 362 ALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIAtSF----TAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
2.23e-77 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 255.07 E-value: 2.23e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 11 IPLLPLPVIMSMgFGLFLIPTATKNLRRIWAFpSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTinndFSLEFGYLID 90
Cdd:COG0651 2 SHLLILPVLLPL-LAAALLLLLGRRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 91 PLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 171 AASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAE------LDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 251 PDAM-EGPTPISALIHAAtMVAAGIFLLARLFPLFIS---LPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFGadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 327 LGYMMLALGIGSYE---AALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1043443886 404 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIAS-FTAGLTAFYMFRIY 450
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-441 |
2.10e-74 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 256.00 E-value: 2.10e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 80 DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 160 LLIGFWFTRPIA-ASACQKAFVTNrVGDFGLLLGILGFFWITGSLEFRDLFKIannwipNNGI-NSLLTTLCAFLLFLGA 237
Cdd:PRK12647 133 LLIGFNHEREAArRAALQALLVTG-GGGLALLAGLILLGNVTGTYSLSELLAS------GDVIrEHPLYLAILLLVLGGA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKR 317
Cdd:PRK12647 206 FTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 318 SLAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVIHSmeslVGyspdkSQNMVLMGGLRKYVPIT 394
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPIT 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1043443886 395 RTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGL 441
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNAL 406
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-449 |
4.50e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.98 E-value: 4.50e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 114 YMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 194 LGFFWI---TGSLEFRDLFKIANNwipnnginsLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKD---------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 271 AAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 351 YSKALLFLGSGSVIHSMeslvgyspDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWL- 426
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....*
gi 1043443886 427 -YSPFFGIIA-SFtaglTAFYMFRI 449
Cdd:MTH00137 411 aWALTLTLIAtSF----TAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-459 |
1.87e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 244.38 E-value: 1.87e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 114 YMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 194 LGFFWITGSLEFRDLFKIANNwipnnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00108 187 AWFLLNLNSWDLQQIFMLNPN----------NSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 274 IFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSK 353
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 354 ALLFLGSGSVIHSMeslvgyspDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-------SNSWL 426
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWA 408
|
330 340 350
....*....|....*....|....*....|...
gi 1043443886 427 YSpfFGIIASftaGLTAFYMFRIYLLTFDGYLR 459
Cdd:MTH00108 409 LL--ITLIAT---SLTAAYSTRIIFFALLGQPR 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
27-417 |
1.94e-70 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 245.99 E-value: 1.94e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 27 FLIPTATKNLRRIWAFPSILLLSIALV--FSVHLSIQQINGSSIYQYLWSWTINNDFSLefgyLIDPLTSIMLILITTVG 104
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVLFiyFLSLIPTTMSGNTVMKTLPWIPSLGINFTL----YVDGLSLLFALLITGIG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 105 ILVLIYSDDYMS-HDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNR 183
Cdd:PRK12645 92 SLVVLYSIYYLSkKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 184 VGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISAL 263
Cdd:PRK12645 172 FGGLSMLGGFILLYIMTGSFSIREMIANADEIQ-----NSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAY 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 264 IHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS----- 338
Cdd:PRK12645 247 LHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhy 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 339 -----------YEAALFHLITHAYSKALLFLGSGSVIHSmeslVGyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCG 407
Cdd:PRK12645 327 qgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAG 397
|
410
....*....|
gi 1043443886 408 IPPLACFWSK 417
Cdd:PRK12645 398 LPPFNGFLSK 407
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-417 |
1.02e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 243.56 E-value: 1.02e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 10 VIPLLPLpvimsmgFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVhLSIQQINGSSIYQYLWSW--TINNDFSLEfgy 87
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAEAWLAGLVALAALVLLA-LLYPAVAAGEVIRAEIEWlpALGLNLSLR--- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 88 lIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12648 74 -LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 168 RPIAASACQKAFVTNRVGDFGLLLGILGFFWITGS------LEFRDLFKiANNWIPnnginsllTTLCafLLFLGAVAKS 241
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSydldvvLAAGDLIR-AHPLYP--------PALV--LILLGAFTKS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAY 321
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 322 STMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVIHsmESlvgyspdKSQNMVLMGGLRKYVPITRTTF 398
Cdd:PRK12648 302 STISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLA 372
|
410
....*....|....*....
gi 1043443886 399 LCGTLSLCGIPPLACFWSK 417
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSK 391
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
18-450 |
1.04e-67 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 238.21 E-value: 1.04e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 18 VIMSMGFGLFlIPTATKNLRRIWAfpSILLLSIALV-FSVHLSIQQINGS-SIYQYLWSWTinNDFSLEFGYLIDPLTSI 95
Cdd:TIGR00940 5 FILPPFAASL-IPILYPSDQRIHI--GWFVLAIPLVcFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 96 MLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASAC 175
Cdd:TIGR00940 80 FSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 176 QKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAME 255
Cdd:TIGR00940 160 QKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAME 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 256 GPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALG 335
Cdd:TIGR00940 235 APTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 336 IGS----------------YEAALFHLITHAYSKALLFLGSGSVIHSmeslvgyspDKSQNMVLMGGLRKYVPITRTTFL 399
Cdd:TIGR00940 315 LGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAM 385
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1043443886 400 CGTLSLCGIPPLACFWSKDEILS-------------NSWLY-SPFFGIIAS-FTAGLTAFYMFRIY 450
Cdd:TIGR00940 386 IASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASvFTFVYSLRFIHGVF 451
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
24-434 |
1.30e-67 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 230.63 E-value: 1.30e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 24 FGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWtinNDFSLeFGYLIDPLTSIMLILITTV 103
Cdd:PRK06525 12 FIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVVLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 104 GILVLIYSDDYMS-------HDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQ 176
Cdd:PRK06525 88 GLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRSAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 177 KAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkiannwipnNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG 256
Cdd:PRK06525 167 KALLITHIGSLGLYLAAATLFLQTGTFALSAL----------SGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 257 PTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFI-SLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALG 335
Cdd:PRK06525 237 PTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 336 IGSY------EAALFHLITHAYSKALLFLGSGSVIHSMESLvgyspdksqNMVLMGGLRKYVPITRTTFLCGTLSLCGIP 409
Cdd:PRK06525 317 LAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCGTR---------LLPRLRGVLKKLPLVGVGFCVAALAITGVP 387
|
410 420
....*....|....*....|....*
gi 1043443886 410 PLACFWSKDEILSNSWLYSPFFGII 434
Cdd:PRK06525 388 PFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
28-418 |
3.13e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 222.78 E-value: 3.13e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 28 LIPTATKNLR-RI-WAFPSILLLSIALVFSVhlsIQQINGSSIYQYLWSWTinNDFSLEFGYLIDPLTSIMLILITTVGI 105
Cdd:PRK12649 20 TVPVLEKVLKqRIgWFAAAIAFTSFALIAQV---APEVIHGTIITGSISWL--PSAGVEFSIYADGLAVLIGLIASGIGV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 106 LVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVG 185
Cdd:PRK12649 95 IIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 186 DFGLLLGILGFFWITGSLEFRDLFKiaNNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:PRK12649 175 GLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLH 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 266 AATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE----- 340
Cdd:PRK12649 253 SATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglg 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 341 --AALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 333 vaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-417 |
1.74e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 222.88 E-value: 1.74e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 73 WSWTinNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTAMLGLVTSSNLIQIYFFW 151
Cdd:PRK12644 58 VPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 152 ELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWipnngiNSLLTTLCAF 231
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL--LADPP------TGPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 232 LLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALA 311
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 312 QRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHL---ITHAYSKALLFLGSGSVIHSmeslVGyspdkSQNMVLMGGLR 388
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLG 358
|
330 340
....*....|....*....|....*....
gi 1043443886 389 KYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK12644 359 RRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-478 |
3.21e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 210.38 E-value: 3.21e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 106 LVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVG 185
Cdd:MTH00165 69 MVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 186 DFGLLLGIlGFFWITGSLEFrdlfkIANNWIPNNGINSLLTTlcaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00165 148 DVAILLSI-AWMMNFGSWNF-----IFYLDFMKNSFEMLLIG---LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVH 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 266 AATMVAAGIFLLARLFPLFISlPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFH 345
Cdd:MTH00165 219 SSTLVTAGVYLLIRFNNLLFS-SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 346 LITHAYSKALLFLGSGSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD---EILS 422
Cdd:MTH00165 298 LLTHALFKALLFLCAGSIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVS 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043443886 423 NSWLySPFFGIIASFTAGLTAFYMFR-IYLLTFDGYLRVHFQNYSSTKEGSLYSISL 478
Cdd:MTH00165 370 MSNL-NFFIFFLFFFSTGLTVSYSFRlIYYSMSGDFNLKSLNNLSDESKFMLKSMIL 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-418 |
4.66e-58 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 211.15 E-value: 4.66e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnngiNSLLTTLCAFLLFLGAVAKS 241
Cdd:PRK12646 150 ISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIK-----NHGLFIPMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAY 321
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 322 STMSQLGYMMLALGIG-----------------SYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLM 384
Cdd:PRK12646 305 STISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRIL 375
|
330 340 350
....*....|....*....|....*....|....
gi 1043443886 385 GGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12646 376 SGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-454 |
4.83e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 206.81 E-value: 4.83e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 45 ILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 125 FVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFF----WIT 200
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMLmhgnWNI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 201 GSLEFrdlfkiannwipNNGINSLLttlcAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 280
Cdd:MTH00209 165 FYLNF------------NSNLGSVI----SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGS 360
Cdd:MTH00209 229 FPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 361 GSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILsNSWLYSPFFGIIAS---F 437
Cdd:MTH00209 309 GNIIHSHGH--------SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfL 379
|
410
....*....|....*..
gi 1043443886 438 TAGLTAFYMFRIYLLTF 454
Cdd:MTH00209 380 STSLTAAYSMRLSYFSL 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-456 |
2.65e-55 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 198.01 E-value: 2.65e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 9 WVIPLLPLPVIMSMgFGLFLIPT---ATKNLRRIWAfpsILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINN------ 79
Cdd:PRK08376 2 LGEHLPPLLIIIPL-FGAFSMPIvslLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgs 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 80 -DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK08376 78 gGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 159 YLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLefrDLFKIANNWIpnngINSLLTTLCAFLLFLGAV 238
Cdd:PRK08376 158 YALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL---NMAYLAVKMS----ENPTVVAKIALALFIAGL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 239 A-KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLLAR-LFPLF---ISLPLIMSFISLVGTITLFLGATLALAQ 312
Cdd:PRK08376 231 AmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 313 RDIKRSLAYSTMSQLGYMMLALGIG---------------SYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdK 377
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------G 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1043443886 378 SQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-451 |
5.89e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 198.45 E-value: 5.89e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 44 SILLLSIAL-VFSVHLSIQQINgssiYQYLWSWTINNDFS--LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:MTH00207 11 SYLLWFMSIlMFPLSLYLMMCN----KTILIEWEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 121 YLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVGDFGLLLGILgffWIT 200
Cdd:MTH00207 87 LSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIG---WTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 201 GSlefrdlfkiaNNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 280
Cdd:MTH00207 163 NQ----------GHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGS 360
Cdd:MTH00207 233 YPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 361 GSVIHSMEslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSPFFGIIAS---F 437
Cdd:MTH00207 313 GSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS-LFYPHNSLMILmifL 383
|
410
....*....|....
gi 1043443886 438 TAGLTAFYMFRIYL 451
Cdd:MTH00207 384 ATALTAAYSTRFTL 397
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-449 |
8.61e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 191.98 E-value: 8.61e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 44 SILLLSIALVFSVHLSIQQINGSSiyqYLWSWTINNDFSLEFGY--LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 122 LRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFvTNRVGDFGLLLGILGF-FWIT 200
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLvLLGH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 201 GSLEFRDLFKiannwipnnginslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARL 280
Cdd:MTH00151 164 WSILSMWDFK--------------LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGS 360
Cdd:MTH00151 230 FPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 361 GSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSwLYSP---FFGIIASF 437
Cdd:MTH00151 310 GSIIHSSSG--------TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESS-LMSPtslLMVLLMFV 380
|
410
....*....|..
gi 1043443886 438 TAGLTAFYMFRI 449
Cdd:MTH00151 381 GVGLTALYSARL 392
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
24-447 |
4.12e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 195.26 E-value: 4.12e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 24 FGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSI-YQYLWSWTI-NNDFSLEFGYLIDPLTSIMLILIT 101
Cdd:PRK12650 10 LAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALSLFFALLAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 102 TVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFwfTRPIAASACQKAFVT 181
Cdd:PRK12650 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRTLIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 182 NRVGDFGLLLGILGFFWITGSLEFRDLFKiANNWIPNNGinslLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK12650 168 TFFGGLTLLAAVAIAATQTGTTSLSGILH-SDVWAEKPG----LTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 262 ALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS--- 338
Cdd:PRK12650 243 AFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfa 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 339 YEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKD 418
Cdd:PRK12650 323 LTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
|
410 420 430
....*....|....*....|....*....|..
gi 1043443886 419 EILSnSWLYSPF--FGIIA-SFTAGLTAFYMF 447
Cdd:PRK12650 394 GMLT-AFLEAPGgnAGVVLlLVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-456 |
1.48e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 187.87 E-value: 1.48e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 15 PLPVIMSmgFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSwtinnDFSLEFG--YLIDPL 92
Cdd:PRK12667 11 ILLVLFA--FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 173 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNWIPNNGI---NSLLTTLCAFLLFLGAVA-KSAQFPLH 247
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsAKIRGLSFPLTGGlagNPPLALGVALALALWAFTiKAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 248 VWLPDAM-EGPTPISALIhAATMVAAGIFLLAR-LFPLFISLPLIMSFISLV-------GTITLFLGATLALAQRDIKRS 318
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRfLYTIFGISPSLIDFRAALspiliilGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 319 LAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITR 395
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1043443886 396 TTFLCGTLSLCGIPPLACFWSKdEILSNSWLYS--PFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
16-454 |
1.81e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 186.44 E-value: 1.81e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 16 LPVIMsmGFGLFLIPTATKNLRRIWAFpsiLLLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSI 95
Cdd:COG1008 12 LPLLG--ALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 96 MLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW-FTRPIAASA 174
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWgGERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 175 cqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNginsllTTLCAFLLFLGAVA-KSAQFPLHVWLPDA 253
Cdd:COG1008 165 --KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLT------AQLLLFLAFFIAFAvKVPMFPFHTWLPDA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 254 -MEGPTPISAlIHAATMVAAGIFLLARlfplfISLPL-------IMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMS 325
Cdd:COG1008 236 hVEAPTAGSV-LLAGVLLKMGGYGLLR-----FALPLfpeasayFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 326 QLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGT 402
Cdd:COG1008 310 HMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAA 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1043443886 403 LSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVF 432
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-449 |
3.29e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 174.68 E-value: 3.29e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMSMGFGLF-LIPTATKNLRRIWAF-PSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTInndfslefGYLID 90
Cdd:PRK08375 5 LLPLLVAVPLLAAALiVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRAD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 91 PLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPi 170
Cdd:PRK08375 77 SLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 171 AASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnnGINSLLTTLcaFLLFLGAVAKSAQFPLHVWL 250
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 251 PDAMEGPTPISALIHAATMVAAGIFLLARLF-----PLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMS 325
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 326 QLGYMMLALGIGSY---EAALFHLITHAYSKALLFLGSGSVihsmeslvgYSPDKSQNMVLMGGLRKYVPITRTTFLCGT 402
Cdd:PRK08375 306 QMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVAS 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1043443886 403 LSLCGIPPLACFWSKDEILS-----NSWLYSPFFgIIASFtagLTAFYMFRI 449
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVgaveaGQWLVLAVL-LASSL---LALLYFLRI 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-449 |
2.31e-42 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 160.67 E-value: 2.31e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 11 IPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFP-SILLLSIALVFSVhlsiqqingssiyqylwsWTINNDFSLEFG--Y 87
Cdd:COG1007 5 LALLPEIILLLGALVLLLLDLFLPRRSRRLLAGlALLGLLLALALLL------------------LALGGGTGTAFGgmF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTA-MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:COG1007 67 VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 167 TRPIAASACQKAFVTnrvGDFG---LLLGILGFFWITGSLEFRDLFKIannwIPNNGINSLLTTLcAFLLFLGAVA-KSA 242
Cdd:COG1007 147 DDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLL-GLVLVLAGLAfKLS 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 243 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLLARLF-----PLFISLPLIMSFISLvgtITLFLGATLALAQRDIK 316
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveafpGLAADWQLLLAVLAV---LSMTVGNLAALAQTNVK 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 317 RSLAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLgsgsVIhsmeSLVGYSPDKSQNMVLMGGLRKYVPI 393
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPL 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1043443886 394 TRTTFLCGTLSLCGIPPLACFWSKDEILSNSW---LYspFFGIIASFTAGLTAFYMFRI 449
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.39e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 159.09 E-value: 1.39e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 10 VIPLLPlPVIMSMGFG-LFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIqqingssiyqyLWSWTINNDFSLefgyl 88
Cdd:PRK08168 5 VCALLP-AVLMSLAAGgLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFAT-----------GAAWPAAAWLEV----- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 89 iDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 169 PIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnGINSLLTTLCAFLLFLGAVAKSAQFPLHV 248
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAA-----QGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 249 WLPDAMEGPTPISALIHAAtMVAAGIFLLARLFPLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 1043443886 329 YMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
6.53e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 156.59 E-value: 6.53e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTA----MLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYNLflasMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 165 WFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANnwiPNNGINSLlttlcAFLL-FLGAVAKSAQ 243
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDF-AAMRAAH---LSPFWASL-----VFLLaLFGFGAKAGL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLLAR-LFPLFISLPLIMSFISLV-GTITLFLGATLALAQRDIKRSLA 320
Cdd:PRK06521 227 VPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvVFDLLGAPGWWWGVLVLAlGAISAVLGVLYALAEHDLKRLLA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGIG--------------SYEAALFHLITHAYSKALLFLGSGSVIHSMEslvgyspdkSQNMVLMGG 386
Cdd:PRK06521 306 YSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 387 LRKYVPITRTTFLCGTLSLCGIPPLACFWSK----DEILSNSWLYSPFFGIIA-------SFTAGLTAFYMFRIYLLTFD 455
Cdd:PRK06521 377 LIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPGLPQWGLKLAVpiaaamlALTAALAAMCFVKFYGITFL 456
|
.
gi 1043443886 456 G 456
Cdd:PRK06521 457 G 457
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-449 |
1.11e-37 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 146.89 E-value: 1.11e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 11 IPLLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFsvhlsiqqingssiyqYLWSWTINNDFSLEFGYLID 90
Cdd:PRK05777 9 ILLLPELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVAL----------------LFVLGAAGGGTAFGGMLVVD 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 91 PLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK05777 73 GFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 171 AASACQKAFVtnrVGDFG---LLLGILGFFWITGSLEFRDLFKIANNwipNNGINSLLttLCAFLLFLGAVA-KSAQFPL 246
Cdd:PRK05777 152 SLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALAD---GSGNSLLL--LFGLVFLLVGLAfKLSAVPF 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 247 HVWLPDAMEG-PTPISALIHAATMVAAgIFLLARLF-----PLFISLPLIMSFISLvgtITLFLGATLALAQRDIKRSLA 320
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvafgGLSEDWQQVLAIIAI---ASMLVGNLAALSQTNIKRLLA 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 321 YSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKallfLGSGSVIHSMESLVGYSPDKSQnmvlMGGLRKYVPITRTT 397
Cdd:PRK05777 300 YSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAV 371
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1043443886 398 FLCGTLSLCGIPPLACFWSKDEILSNS------WLyspffGIIASFTAGLTAFYMFRI 449
Cdd:PRK05777 372 MTIFMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-465 |
4.17e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 142.39 E-value: 4.17e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMsmGFGLFLIPTATKNLRRIWAFPS---ILLLSIALVFSVHLSiqqingSSIYQYLWSWTINNDFSLEFGYLI 89
Cdd:TIGR01972 4 LIFLPLIG--ALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWfTRP 169
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 170 IAASACQKAFVTNRVGDFGLLLGILGFFWITGslefrDLFKIaNNWIPNNgINSLLTTLCAFLLFLGAVAKSAQFPLHVW 249
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL-LELLNLP-LPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 250 LPDAM-EGPTPISALIHAATMVAAGIFLLARLFPLF-----ISLPLIMSFislvGTITLFLGATLALAQRDIKRSLAYST 323
Cdd:TIGR01972 226 LPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdaslYFAPVLAAL----GVIAIIYGALIALAQTDIKRLIAYSS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 324 MSQLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVihsmeslvgYSPDKSQNMVLMGGLRKYVPITRTTFLC 400
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFML 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1043443886 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNY 465
Cdd:TIGR01972 373 FAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-456 |
8.32e-35 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 138.80 E-value: 8.32e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 11 IPLLPLPVIMSMGFGLFLIPTAtKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLID 90
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTE-RFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 91 PLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTAMLGLVTSSNLIQIYFFWE--LVGMcsYLLIGFW--F 166
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 167 TRPIAASacqKAFVTNRVGDFGLLLGILGFFWI----TGSLEFRDLFKIAnnwIPNNGINSLlttlcaFLLFLGAVA-KS 241
Cdd:PRK05846 158 NRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLP---LPPGVQYWL------FLAFFIAFAvKM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLAR-LFPLFISLPLIMSFISLV-GTITLFLGATLALAQRDIKRSL 319
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 320 AYSTMSQLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRT 396
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAA 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 397 TFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK05846 377 FFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
74-417 |
1.31e-34 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 140.13 E-value: 1.31e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 74 SWTINNDFSLEFGYLIdpLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTAMLGLVTSSNLIQIYFFWEL 153
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 154 VGMCSYLLIgfWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDlfkIANNWIPNNGINSLLttLCAFLL 233
Cdd:PRK08668 130 MTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQGLINDTSTGFAL--IVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 234 FLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAAtMVAAGIFLLARL------------FPLFISLPLIMSFISLVGTI 300
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQ-LSKLGAYGFLLVlyvlpgtklfseFGTYRGVPLFNYILAWLGNI 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 301 TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdK 377
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------G 352
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1043443886 378 SQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 353 TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-467 |
3.33e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 137.74 E-value: 3.33e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 81 FSLEFG-YLIDPLTSIMLILITtvgILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:MTH00095 37 LSLKFNfYFNSLLFSLILLLVT---LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 160 LLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFWItgSLEFRDLfkiannwipnnginSLLTTLCAFLLFLGAVA 239
Cdd:MTH00095 114 FLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFIFS--SYYFFSF--------------SFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLpLIMSFISLVGTITLFLGATLALAQRDIKRSL 319
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVV 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 320 AYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESlvgyspdkSQNMVLMGGLRKYVPITRTTFL 399
Cdd:MTH00095 256 ALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLL 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 400 CGTLSLCGIPPLACFWSKDEILSNSWL--YSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSS 467
Cdd:MTH00095 328 VTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-449 |
4.95e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 136.48 E-value: 4.95e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 75 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWE 152
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 153 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRdlfkiannwipNNGINSLLTTLCAFL 232
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV-----------SGGLFSKNQSIILLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 233 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLVG------TITLFLGA 306
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNwlifipIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGI---GSYEAALFHLITHAYSKALLFLGSGSVihsmeslvgYSPDKSQNMVL 383
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043443886 384 MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPFFGIIASFTAGLTAFYMFRI 449
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
35-432 |
2.44e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 136.40 E-value: 2.44e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 35 NLRRIWAFPSIL-LLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEfgylIDPLTSIMLILITTVGILVLIYSDD 113
Cdd:PRK08667 24 RHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAFFIILIGLVSLCVAIYSLG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 114 YMSHDEGYLRFFV---YISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLL 190
Cdd:PRK08667 100 YNEHMSSNERANLlsaLTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 191 LGILGFFWITGSLEFrdlfkiannwiPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATM 269
Cdd:PRK08667 180 LGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 270 VAAGIFLLARLFPLFISLPLIMSF-ISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG----------- 337
Cdd:PRK08667 248 LKVAVYGLVRFLMDVLSPELWWGVlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYvifgvygldtl 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 338 ---SYEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACF 414
Cdd:PRK08667 328 allALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGF 398
|
410
....*....|....*...
gi 1043443886 415 WSkdEILsnswLYSPFFG 432
Cdd:PRK08667 399 AS--ELL----LYESFFQ 410
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-437 |
1.12e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 132.38 E-value: 1.12e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 22 MGFGLFLIPTATKNLRRIWAFpsilllsIALVFSVHLSIQQINGSsiyqylwsWTINNDFSLEFgyLIDPLTSIMLILIT 101
Cdd:PRK07234 15 LGFAIYLLPKLDRNLALGMAI-------VSAVYALGLVASMVPLE--------LTLLDNFGVTL--RADALSGYFILTNA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 102 TVGILVLIYSddYMSHDEGYLRFFVYIsfFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVT 181
Cdd:PRK07234 78 LVTLAVIFYC--WESAKTRFFYAQLLI--LHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 182 NRVGDFgLLLGILGFFWITGSLEFRDLfkiannwipnnginSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK07234 154 NVAMLF-YLIGAVLVYQANGTFAFSGL--------------ATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPV 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 262 ALIHAATMVAAGIFLLARLFPLFISLPLImsfISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGsyea 341
Cdd:PRK07234 219 SALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG---- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 342 ALFHLiTHAYSKALLFLGSGSVihsmeslvgYSPDKSQNMVLMGGLRKYVPITRTTFlcgtlSLCGIPPLACFWSKDEIL 421
Cdd:PRK07234 292 GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLTMASF-----SIAGFPLLAGFVSKVLTL 356
|
410 420
....*....|....*....|..
gi 1043443886 422 SN--SW----LYSPFFGIIASF 437
Cdd:PRK07234 357 KNllPWqaiaLNLAAVGTAASF 378
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-443 |
2.15e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 131.81 E-value: 2.15e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 89 IDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTamlGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 167 TRPiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnnGINSLLTTLCAFLLFLGAVAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAG------TIDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLLARLFPLFISLPLIMSFISLV---GTITLFLGATLALAQRDIKRSLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 323 TMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVIHSMeslvgyspdKSQNMVLMGGLRKYVPITRTTFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1043443886 400 CGTLSLCGIPPLACFWSKdeilsnswlyspFFGIIASFTAGLTA 443
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSK------------FRIILAGLSAGYTW 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
88-439 |
1.25e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 126.58 E-value: 1.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHD-------EGYLRFfvYISFFNT---AMLGLVTSSNLIQIYFFWELVGMC 157
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 158 SYLLIGFWFTRPiAASACQKAFVTNRVGD----FGLLLGILGFFWITGS----LEFRDLFKIANNwipnngINSLLTTLC 229
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGDgemaILWTELLKHASL------LDPTLMKLA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 230 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIflLARLFPLfislPLIMSFisl 296
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAA--IGSDFPG----RLLLIF--- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 297 vGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVIHSMeslvgy 373
Cdd:PRK06458 288 -GLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY------ 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1043443886 374 spdKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNS-----WLYSPF--FGIIASFTA 439
Cdd:PRK06458 361 ---GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILllLLLTLAFAA 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-457 |
1.88e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 122.75 E-value: 1.88e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMSMGFGLFLIptATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWtiNNDFSLEFgyLIDPL 92
Cdd:PRK07691 5 LVILPILIPVITAILLI--FLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRpIAA 172
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 173 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNWIPNNGinslLTTLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsVKIAELSAGQTG----LITVVAILFLFVFATKAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 252 DAMEGP-TPISALIhAATMVAAGIFLLARLFPLFIS--LPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 329 YMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVIHsmesLVGYSPDKSqnmvlMGGLRKYVPITRTTFLCGTLSL 405
Cdd:PRK07691 313 VILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1043443886 406 CGIPPLACFWSKDEILSNSWLYSPF-FGIIASFTAGLTAFYMFRIYLLTFDGY 457
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFYvSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
80-422 |
2.73e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 120.38 E-value: 2.73e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 80 DFSLEFgYLIDPLTSIMLILITTVGILVLIYSddYMSHDEG-YLRFFVYISffntAMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 159 YLLIgfWFTR-PIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnnginsLLTTLCAFLLFLGA 237
Cdd:PRK12668 130 TFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIA--------------GLGGTAAWLILIGF 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLplimsfISLVGTITLFlGATLALAQRDIKR 317
Cdd:PRK12668 194 GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 318 SLAYSTMSQLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVIHSmeslVGYSpdksqNMVLMGGLRKYVPIT 394
Cdd:PRK12668 267 LLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLT 337
|
330 340
....*....|....*....|....*...
gi 1043443886 395 RTTFLCGTLSLCGIPPLACFWSKDEILS 422
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
72-473 |
3.96e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.51 E-value: 3.96e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 72 LWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE-GYLRFFVYISFFNTAMLGLVTSSNLIQIYFF 150
Cdd:TIGR01770 51 LTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 151 WELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINSLlttlcA 230
Cdd:TIGR01770 131 LELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLL-----G 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 231 FLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAaGIFLLARLFPLFIS--LPLIMSFISLVGTITLFLGA 306
Cdd:TIGR01770 206 IVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIA-IFAVFLRLFLYILFgfSEAWQIFLAIIAFLSMLIGN 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE---AALFHLITHAYSKALLFlgsgSVIHSMESlvgYSPDKSQNMVL 383
Cdd:TIGR01770 285 FGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 384 MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYspFFGIIASFTAGLTAFYMFRIYLLTFDGYLRV 460
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffaLLKSGLY--WLAVIAVLTSVIGAFYYLRVVKVMYFDKPER 435
|
410
....*....|...
gi 1043443886 461 HFQNYSSTKEGSL 473
Cdd:TIGR01770 436 RIPSNPQSKAQSL 448
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
6.23e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 115.52 E-value: 6.23e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIG---FW 165
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGlnkGW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 166 ftRPIAASACQKAFVTNrVGDFGLLLGILGFFWITGslEFRDLFKIANNWIPNngINSLLTTLCAFLLFLGAVAKSAQFP 245
Cdd:PRK08601 150 --KVAREAAKISGMLFL-ISWLALALAIVWLFIATG--EWQLTSVLSNENLAQ--LGTWEKTGINLLLILAVMIPAAQWP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 246 LHVWLPDAMEGPTPISALIHAAtMVAAGIFLLARLFPLF-----ISLPLIMSFISLVgtitlfLGATLALAQRDIKRSLA 320
Cdd:PRK08601 223 FQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFhddiaQILLLIFASISVL------IGTGISLVQVDYKRQLV 295
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1043443886 321 YSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNMVLMGGL 387
Cdd:PRK08601 296 GSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
13-454 |
2.73e-25 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 110.42 E-value: 2.73e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMSMGFGLFLIptATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSWtinndfSLEFG--YLID 90
Cdd:PRK12663 5 LLILPMLLPLLCGLVLV--FLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW------LPPFGiqFTGD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 91 PLTSIMLILITTVGILVLIYSddYMSHDEGYLRFFVYiSFFNTAMLGLVTS---SNLIQIYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12663 77 SLSALMVTTASFVATAIMAYG--FGDIEHSGRRYGFP-PFILLLMAGVIGSfltGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 168 RPIAASACQKAFVtNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnNGINSLLTTLcAFLLFLGAVAKSAQFPLH 247
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND----MGDTATLTTI-ALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLLARLFP-LFISLPLIMSF-ISLVGTITLFLGATLALAQRDIKRSLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 325 SQLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGSVIHsmesLVGYSPDKSqnmvlMGGLRKYVPITRTTFLCG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1043443886 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY-MFRIYLLTF 454
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-449 |
6.35e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 109.05 E-value: 6.35e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 16 LPVIMSMGFGLfliptaTKNLRRIWAFPSILLLsIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEfgylIDPLTSI 95
Cdd:PRK12662 12 IPLLSAVVCAL------LKNRKLVKIISCIVVA-VSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 96 MLILITTVGILVLIYSDdYMSHDE----GYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK12662 81 MLVLVNFIAVMSVLYGI-YPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-A 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 172 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGINsllttLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK12662 159 LVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 252 DAM-EGPTPISALIhAATMVAAGIFLLARLFP-------LFISLPLIMSFISLVGTITLFlGATLALAQRDIKRSLAYST 323
Cdd:PRK12662 234 QAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMILAALAIVF-GSVLAILSKDIKRIFAYSS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 324 MSQLGYMMLALGIGSYE---AALFHLITHAYSKALLFLGSGSVIHSMESLvgyspdksqNMVLMGGLRKYVPITRTTFLC 400
Cdd:PRK12662 312 ISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKITLAFVL 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1043443886 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIA-SFTAGLTAFYMFRI 449
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVlLVGSGLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.25e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 108.43 E-value: 1.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 44 SILLLSIALVFSVHLSIqqiNGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 124 FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLgILGFFWITGSL 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 204 EFrdlfkiannwipnnginsllttLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARlFPL 283
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 284 FISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 364 IhsmeslVGYSPDKSQNMVLMGGLRKYVPITRTTFLcgTLSLCGIPPLACFWSKDEILSN--SWLYSPFFGIIASFTAGL 441
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLL--VLGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 1043443886 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-451 |
1.13e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 99.02 E-value: 1.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQiNGSSIYQYL-WSWTINNDFSLEfgylIDP 91
Cdd:PRK07363 5 LLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSD-PGMQFQEYLpWNEPLGLSYSLG----VDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 92 LtSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK07363 80 L-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 172 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNGINSLLTtlcafLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDAISTQNLSLNTQLILLT-----GLLLGFGIKIPLVPLHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 252 DAMEGPTPISALIHAATMVAAGIFLLAR----LFPLFISLplIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQL 327
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRfglqLFPQTWSL--VAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 328 GYMMLALGIG---SYEAALFHLITHAYSKALLFLGSGSVihsmESLVGySPDKSQNMVLMGGLRKyVPITRTTFLCGTLS 404
Cdd:PRK07363 308 GYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-TRDLDVLNGLMNPIRG-LPLTSALLVLAGMA 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1043443886 405 LCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYmFRIYL 451
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-454 |
5.51e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 93.67 E-value: 5.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 16 LPVIMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYqylwswtinndfslefgYLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 96 MLILITTVG-ILVLIYSDDYMSH-------DEGYLR-FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 167 TRPIAASACQKAFVTNRVGDFGLLlGILGFFWIT------GSLEFRDLFKIANnwipnnGINSLLTTLCAFLLFLGAVAK 240
Cdd:PRK08676 147 ARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHAS------LLSPSVLGASFLFIFIGFLAK 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLLARLFPLFISLPLIMSFISLV---GTITLFLGATLALAQRDIK 316
Cdd:PRK08676 220 SGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLiglGIFSIAVAAFSMLSQRNLK 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 317 RSLAYSTMSQLGYMMLALGIGSYEA---ALFHLITHAYSKALLFLGSGsVIHSMeslvgYSPDKSQNmvlMGGLRKYVPI 393
Cdd:PRK08676 299 KLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFRLQPV 369
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043443886 394 TRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-445 |
2.21e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 92.07 E-value: 2.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 13 LLPLPVIMSMGFGLFLIPTATKNLRRIwafpSILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPL 92
Cdd:PRK06473 5 LIWIPLLGAILIGFWPSGINGKLARSV----ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 93 tSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPI 170
Cdd:PRK06473 81 -SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 171 AASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPnngINSLLTTLCAFLLFLGAvaKSAQFPLHVWL 250
Cdd:PRK06473 158 AAT---KFLLYTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLP---LSTQLLLLAPILVGFGI--KIPLVPFHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 251 PDA-MEGPTPISALIhAATMVAAGIFLLAR----LFPLfiSLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMS 325
Cdd:PRK06473 229 PDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgvgLFPE--AWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 326 QLGYMMLALGIG---SYEAALFHLITHAYSKALLFLGSGSVihsmeslvgYSPDKSQNMVLMGGL---RKYVPITRTTFL 399
Cdd:PRK06473 306 HMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMI 376
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1043443886 400 CGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY 445
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVY 422
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
19-454 |
6.36e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 90.45 E-value: 6.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 19 IMSMGFGLFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGS------SIYQYLWSWTINNDFSLEFGYLIDPL 92
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISstslvmSITALLFQWREEPMISFSGNFQTNNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFvyISFFNTAMLG---LVTSSNLIQIYFFWELVGMCSYLLIGFwftrp 169
Cdd:CHL00049 81 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 170 iaasaCQKAFVTNRVGDFGLLLG-----IL--GFFWITG-SLEFRDLFKIANNWIPNNGINSLLTTLCAFLLFLGAVAKS 241
Cdd:CHL00049 154 -----TKKDVRSNEATMKYLLMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLLARLF--PLFISLPLIMSFISLVGTITLFLGATLALAQRDIKRS 318
Cdd:CHL00049 229 SLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 319 LAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGyspdkSQNMVLMGGLRKYVPITRTTF 398
Cdd:CHL00049 308 LAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSL 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1043443886 399 LCGTLSLCGIPPLACFWSKDEILSNSW---LYSPFFgiIASFTAGLTAFYMFRIYLLTF 454
Cdd:CHL00049 383 ALCLLSLGGIPPLAGFFGKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
50-417 |
8.36e-19 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 90.09 E-value: 8.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 50 IALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIysdDYMSHDEGYlRFFVYIS 129
Cdd:PRK06277 31 LTFIVAILLPILPFLASYGYYYFGGHGLVNGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSS-GLYVFLM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 130 FFNTAML-GLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFgLLLGILGFFWITGSLEFRDL 208
Cdd:PRK06277 107 LMGLASVsAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 209 -FKIANNwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLLaRLFPL 283
Cdd:PRK06277 186 hNALLVN------PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 284 FISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYEAALFHLITHAYSKALLFLGS 360
Cdd:PRK06277 259 LSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGA 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043443886 361 GSVihsmeslvgYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 339 GIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-459 |
5.88e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 87.96 E-value: 5.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDE----GYLrffvyISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGf 164
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 165 wftrpiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNGInsLLTTLCAFLLFLGAVaksaqf 244
Cdd:PRK08042 132 ------NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLLAGII------ 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPLIMSFISLV-GTITLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 324 MSQLGYMMLALGIG--------------SYEAALFHLITHAYSKALLFLGSGSVIHSmeslVGYspdksQNMVLMGGLRK 389
Cdd:PRK08042 278 LENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 390 YVPITRTTFLCGTLSLCGIPPLACFWSKDEI------LSNSWLY-----SPFFGIIASFTAGLTAFYMFRIYLLTFDGYL 458
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLGAP 428
|
.
gi 1043443886 459 R 459
Cdd:PRK08042 429 R 429
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
135-449 |
1.53e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 82.00 E-value: 1.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 135 MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANN 214
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 215 WIPNNGINSLLTTLcafLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLLarlfplFISLPLIMSF 293
Cdd:MTH00196 86 GQSFSSVSVPIGYL---LIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI------LVSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 294 ISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE---AALFHLITHAYSKALLFLgsgsvihsmeSL 370
Cdd:MTH00196 155 LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFEsiqASLVYLFIYIIMSICVFS----------II 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 371 VGYSPDKSQnMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFF-GIIASFTAGLTAFYMFRI 449
Cdd:MTH00196 225 LALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYYVRI 303
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
226-454 |
2.03e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 82.71 E-value: 2.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 226 TTLCAFLLFLGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLLAR----LFPLFISLPLIMsfisLVGTI 300
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRthtlLFPGGGLDTLLM----VVALL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 301 TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFLGSGSVihsmESLVGyspdk 377
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG----- 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 378 SQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL-----SNSWLysPFFGIIAS-FTAGLTAFYMFRIYL 451
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGvVTSLLTLYAVARVWT 431
|
...
gi 1043443886 452 LTF 454
Cdd:PRK12665 432 KAF 434
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
134-453 |
2.91e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 79.31 E-value: 2.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 134 AMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPIAASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKI 211
Cdd:PRK12561 99 AQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGDTFTF-DLAEL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 212 ANNWIPnnginsLLTTLCAFLLFLGAVA-KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL------LARL-FP 282
Cdd:PRK12561 175 GAKSYP------LALELLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnVQ 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 283 LFISLPLIMSFISLV-GTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYEA-----ALFHLITHAYSKALL 356
Cdd:PRK12561 242 MLPDAHVYFAPALAIlGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAAL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 357 FLGSGsvihsmeslVGYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGI 433
Cdd:PRK12561 320 FFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRT 390
|
330 340
....*....|....*....|....
gi 1043443886 434 IASFTAG----LTAfymfrIYLLT 453
Cdd:PRK12561 391 ITILLAAvgliLTP-----IYLLS 409
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
9.18e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.99 E-value: 9.18e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1043443886 75 WTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-421 |
1.70e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 76.59 E-value: 1.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 44 SILLLSIALVFSVHLsIQQINGSSIYQYLWSWTINNDFSLEFGYLIdplTSIMLILITTVGILVLIYSDDYMShdEGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILS--EGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 124 FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSL 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 204 EFRdlfkiANNWIPNNGINSLLTTLCafLLFLGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFllarlfP 282
Cdd:MTH00199 179 SIQ-----GINSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 283 LFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE---AALFHLITHayskALLFLG 359
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFEsiqASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1043443886 360 SGSVIHSMESLVGYspdksqnMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
65-417 |
1.78e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.47 E-value: 1.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 65 GSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTAMLG---LVTS 141
Cdd:PRK02504 52 GAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILL--TATLGgmfLSGA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 142 SNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEfrDLFKIANNWIPNNGI 221
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPSL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 222 NSLLttlcAFLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAG----IFLLARLFPLFIS----LPLIM 291
Cdd:PRK02504 208 GLAL----ALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGfalaIRLLVTAFPSFDEqwklLFTAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 292 SFISLVgtitlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YEAALFHLITH------AYSKALLF-LGSG 361
Cdd:PRK02504 283 AILSMV------LGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTG 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043443886 362 SvihsmESLVGYSpdksqnmvlmgGLRKYVP-ITRTTFLCgTLSLCGIPPLACFWSK 417
Cdd:PRK02504 357 T-----DQISDYA-----------GLYQKDPlLTLGLSLC-LLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
1.91e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.11 E-value: 1.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 240 KSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLLarLFPLFISLPLIMSfislVGTITLFLGATLALAQRDIKRS 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALI--AIIPKFTVYIL--LTSLVITSKLLLS----VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 319 LAYSTMSQLGYMMLALGIGSYEaALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNMVLMGG---LRKYV---- 391
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlVRRLVdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043443886 392 -----PITRTTFLCGTLSLCGIPPLACFWSKDEILSNS-----------WLYSPFFGIIASFtagLTAFYMFRI 449
Cdd:MTH00198 463 lsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiafssslsiYYLVALFAIICTC---ISAFYYIRI 533
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-453 |
4.63e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 62.80 E-value: 4.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 148 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI-LGFFWITGSLEFRDLfkiANNWIPNNginslLT 226
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL---AAKDFGLG-----FQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 227 TLCAFLLFLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLL---ARLFP----LFISLPLIMsfislvG 298
Cdd:PRK02546 213 LLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLrmnAGMLPdahaQFAPLLIVL------G 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 299 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYEA-----ALFHLITHAYSKALLFLgsgsvihsmesLVGY 373
Cdd:PRK02546 287 VVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGA 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 374 SPDKSQNMVL--MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGLTAFyMFR 448
Cdd:PRK02546 354 TYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAVGVI-LTP 432
|
....*
gi 1043443886 449 IYLLT 453
Cdd:PRK02546 433 IYLLS 437
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
7.19e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 62.25 E-value: 7.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 95 IMLILITTVGILVLIYSDDYMShdEGYLRFFVYISFFNTAMLGLVtssNLIQIYFFWELVGMCSYLLIGFWFTRPIAASA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLT--KSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 175 CQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWIPNNGINSLLttlcaFL-LFLGAVAKSAQFPLHVWLPDA 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL--ASCSHVVSEQTQKWI-----FLgIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 254 -MEGPTPISALIHAATMVAAGIFLLARLFPLfisLPL----IMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:MTH00226 257 hVEAPVAGSVLLAGILLKLGGYGLVRLSWPI---LPLgaqnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 329 YMMLAL---GIGSYEAALFHLITHAYSKALLFLgsgsvihsmesLVGYSPDKSQNMVL--MGGLRKYVPITRTTFLCGTL 403
Cdd:MTH00226 334 LVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI-----------LVTILYDRHHTRLIkyYRGLSITMPIWGTIMIVTSL 402
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1043443886 404 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMF 447
Cdd:MTH00226 403 ANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
136-466 |
1.06e-09 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 61.50 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 136 LGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTnRVGDFGLLLGILGF-FWITG--SLEFRDLfkiA 212
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLGMgLYGSNepTLNFETL---A 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 213 NNWIPnnginsLLTTLCAFLLFLGAVA-KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFL------LAR----L 280
Cdd:CHL00011 202 NQSYP------VALEILFYIGFLIAYAvKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRinmeL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 281 FPLFISLplIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSY-----EAALFHLITHAYSKAL 355
Cdd:CHL00011 269 LPHAHSI--FSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 356 LFLgsgsvihsmesLVGYSPDKSQNMVL--MGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEI---LSNSWLYSPF 430
Cdd:CHL00011 345 LFF-----------LAGTSYDRIRLVYLdeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLM 413
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1043443886 431 FGIIASFTAG----LTAFYMFRIYLLTFDGYLRVHFQNYS 466
Cdd:CHL00011 414 PKILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSY 453
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
230-422 |
3.93e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.86 E-value: 3.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 230 AFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLLARLFPLF------ISLPLIMSFISLVGTITL 302
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE---AALFHLITHAYSKALLFL----------GSGSVIHSMES 369
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPE 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1043443886 370 LvgYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILS 422
Cdd:PRK12666 371 L--YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQ 421
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
26-466 |
5.73e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.18 E-value: 5.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 26 LFLIPTATKNLRRIWAFPSILLLSIALVFSVHLSIQQINGSSIYQYLWSwtinndfslefgylIDPLTSIMLILITTVGI 105
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLS--------------YDPLSSPLVILSCWLLP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 106 LVLIYSDDYMsHDEGYLRFFVYISFFNTAMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTN 182
Cdd:MTH00206 74 LMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 183 RVGDFGLLLGILgffWITGSLEFRDLFkiannWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpis 261
Cdd:MTH00206 153 LIGSLPLLIALL---FLQNSLGSLSLY-----ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 262 alihAATMVAAGIFL------LARLFPLFI-SLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL 334
Cdd:MTH00206 222 ----AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 335 GIGS---YEAALFHLITHAY-SKALLFLGSgsvihsmeslVGYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPP 410
Cdd:MTH00206 298 LSGSpwgFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1043443886 411 LACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYS 466
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
5.74e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.42 E-value: 5.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 94 SIMLILITTVGILVLIYSDDYmsHDEGYLRFFVYiSFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGfwftrpIAAS 173
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY--DHYGKWLSSLY-ILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIA------LTKK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 174 ACQKAFVTNRVGDFGLLLGILGFFW---ITGSLEFrdlfkiannwipnngiNSLLTTLCAFLLFLGAVAKSAQFPLHV-- 248
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 249 WLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLPL--IMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQ 326
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1043443886 327 LGYMMLALG--IGSYE-----------AALFHLITHAYSKALLFLGSGSV 363
Cdd:PRK06459 262 NGAILVALGlyMVTKQlitsiehfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
45-456 |
1.03e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 58.21 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 45 ILLLSIALVFSVHLSIQQINGSSIYQYLWSWTINNDFSLEFGYL-IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 123
Cdd:MTH00014 12 LLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 124 FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSL 203
Cdd:MTH00014 92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 204 EfrdlFKIANNWIPNNginsLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 276
Cdd:MTH00014 172 S----MLMSSMEPPSI----YLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 277 LARLFPLFISLPLIMSF----ISLVGTITLFLgatLALAQRDIKRSLAYSTMSQLGYM---MLALGIGSYEAALFHLITH 349
Cdd:MTH00014 237 LLRMSSLFMHINKSLSApfssISLVGAVITSL---ICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 350 AYSKALLFlgsgsVIHSMEslvgYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSP 429
Cdd:MTH00014 314 GLCSSALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSL 384
|
410 420
....*....|....*....|....*..
gi 1043443886 430 FFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:MTH00014 385 STAILLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
36-359 |
1.06e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 58.15 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 36 LRRIWAFPSILLLSIALVFSVHLsiqqiNGSSIYQY--LWSWTINNDFSLEFGYLIDPLTSIML------ILITTVGILV 107
Cdd:MTH00204 28 LKKRALEWSLAILFSTLVLWGAF-----DGEGQFQFinLIEWIISPTLNFQWGPLVFAVDGVSLffilltTLLIPICILI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 108 LIYSDDYMshdegYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDF 187
Cdd:MTH00204 103 SWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSV 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 188 GLLLGILGFFWITGSLEFRDLFKIAnnwIPNNginsllTTLCAFL-LFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIH 265
Cdd:MTH00204 178 FMLLGIFQLYSITGTTDYQILLNIK---LPLS------IQKWLLVgFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 266 AATMVAAGIFLLARLFPLFISLPLIMS-FISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYE---A 341
Cdd:MTH00204 249 GILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEglvA 328
|
330
....*....|....*...
gi 1043443886 342 ALFHLITHAYSKALLFLG 359
Cdd:MTH00204 329 AVFLMLAHGFVSSALFIA 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
139-486 |
2.05e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 56.90 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 139 VTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLefrdlfkiannwipn 218
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW--------------- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 219 nGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLfislpLIMSFISLVG 298
Cdd:MTH00200 85 -GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 299 TITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVgyspdks 378
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLS------- 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 379 qnMVLMGGlrkyvPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMfriylltfdgYL 458
Cdd:MTH00200 232 --SSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF----------YL 294
|
330 340
....*....|....*....|....*...
gi 1043443886 459 RVHFQNYSSTKEGSLYSISLWGKGPSKG 486
Cdd:MTH00200 295 RLSYLTLLTLSPNQINMMSSWRTKSNSN 322
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
26-464 |
1.65e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 54.58 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 26 LFLIPTatknlrrIWAFPSILLLSIALVFSVHLSIqqingssIYQYLWSWTINNDFSLEFGYL-IDPLTSIMLILITTVG 104
Cdd:MTH00127 9 LMLIPT-------TWLTPAKWLWTTTLAHSLLIAL-------ASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 105 ILVLIYSDDYMSHdEGYLRFFVYISFFNTAMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVT 181
Cdd:MTH00127 75 PLMILASQNHTAP-EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFY 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 182 NRVGDFGLLLGILGFFWITGSLEFRDLfKIANNWIPNNGINSLLTTLC--AFLLflgavaKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00127 154 TLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPI 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 260 ISALIHAATMVAAGIFLLARLFPLFISLPLIMS--FISLvGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG 337
Cdd:MTH00127 227 AGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSypFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQ 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 338 ---SYEAALFHLITHAYSKALLFLGSGSvihsmeslvGYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACF 414
Cdd:MTH00127 306 tpwGFTGALILMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1043443886 415 WSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQN 464
Cdd:MTH00127 377 MGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
2.82e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 53.63 E-value: 2.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 87 YLIDPLTSIMLILITTVGILVLIYSDD--------YMSHDEGYLrFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 159 YLLIGFWfTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWipnngINSLLTTLCAFLLFLGAV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEH-----TNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLP----LIMSFISLVGTITLFLGATLALAQRD 314
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYEtiktAITNFIRPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 1043443886 315 IKRSLAYSTMSQLGYMML 332
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
3.27e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 53.38 E-value: 3.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 88 LIDPLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYIS---FFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLK-NEPINRQRTYISmliILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 165 WF--TRPIAASAcQKAFVTnRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNGINSLLTTLC--AFLLflgavaK 240
Cdd:MTH00068 136 WGnqEERLNAGT-YFLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLACllAFMV------K 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 241 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL----------LARLFPLFISLPLIMSFISLVGTItlfLGATLA 309
Cdd:MTH00068 207 MPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilriSILLTPLSKELSYPFIILALWGVL---MTSLIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 310 LAQRDIKRSLAYSTMSQLGYMMLALGIG---SYEAALFHLITHAY-SKALLFLGSGSvihsmeslvgYSPDKSQNMVLMG 385
Cdd:MTH00068 277 LRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLR 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1043443886 386 GLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVH 461
Cdd:MTH00068 347 GAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-467 |
3.63e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 52.58 E-value: 3.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 222 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarlfPLFISLPLIMSFISLVGTIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 382 VLMGGLrkyvpitrttflcgtLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTA--FYMFRIYLLTFDGYLR 459
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
....*...
gi 1043443886 460 VHFQNYSS 467
Cdd:MTH00144 300 KKSNSSKV 307
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-447 |
5.07e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 52.53 E-value: 5.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 69 YQYLWSWTINNDFslefgYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIY 148
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 149 FFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrdLFKianNWIPNNGINSLLTTL 228
Cdd:MTH00150 82 FFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM--LLI---SSLRKLLSSMGLWGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 229 CAFLLFLgavAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLFPLFISLPliMSFISLVGTIT 301
Cdd:MTH00150 157 LVFLAFL---VKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFSIFLISLS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 302 L---FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YEAALFHLITHAYSKALLFlgsgsvihsmeSLVGYSP 375
Cdd:MTH00150 225 LwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CLANYTY 293
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1043443886 376 DKSQ--NMVLMGGLRKYVPItrTTFLCGTLSLC--GIPPLACFWSKDEILSNSWLYSPFFGII---ASFTAGLTAFYMF 447
Cdd:MTH00150 294 EKVHsrSLFLSKGMLMLYPS--LSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVPlglMVFLSGLYSLYLY 370
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-466 |
5.22e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 52.75 E-value: 5.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 95 IMLILITTVGILVLIYSDDYMSHDegylrFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 175 CQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK--------IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 254 MEGPTpisalihAATMVAAGIFL-LARLFPLFISLPLIMS----FISLVGTITLF---LGATLALAQRDIKRSLAYSTMS 325
Cdd:MTH00217 234 VEAPV-------AGSVILAGVLLkLGGYGFIRFSWPLLPEaseyFSPLIQTLSLLaiiYGSLTTCRQVDLKRIIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 326 QLGymMLALGIGSYE-----AALFHLITHAYSKALLFLGSGSVIHSMES-LVGYSPDKSQNMVLMGGLrkyvpitrttFL 399
Cdd:MTH00217 307 HMG--LVTLGIFSHTiqglvAAIFLMLAHGLVSSALFIAVTFLYERHHTrLIKYYRGMVITMPLFGIL----------ML 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1043443886 400 CGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYmfRIYLltfdgYLRVHFQNYS 466
Cdd:MTH00217 375 LLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGY--SIYL-----YNRVCFGAPS 434
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
218-414 |
2.08e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 47.51 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 218 NNGINSLLTTLcAFLLFLGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarlfpLFISLPLIMSFISLV 297
Cdd:MTH00112 90 TNPTSCTLLTL-ALAMKLGLA------PFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTL 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 298 GTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYEAALFHLITHAYSKALLFLgsgsVIHSMESLvgyspdK 377
Cdd:MTH00112 158 AILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------T 226
|
170 180 190
....*....|....*....|....*....|....*..
gi 1043443886 378 SQNMVLMgglRKYVPITRTTFLCGTLSLCGIPPLACF 414
Cdd:MTH00112 227 LKDMMTS---WTKSPTLNTTLMLTLLSLAGLPPLTGF 260
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-449 |
4.14e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 46.46 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 124 FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT-RPIAASAcqKAFVTNRVGDFGLLLGILGFFWITGS 202
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSpRSVEATI--KYFLVQAFSAAILLNGALIQAWLSGS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 203 LEfrdlfkiannwipnngINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLarlfp 282
Cdd:MTH00041 84 WS----------------INGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILL----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 283 LFISLPLIMSFISLVGTITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGS 362
Cdd:MTH00041 143 ISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNF 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 363 VIHSMESLvgyspdksqnmvlmGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK-----DEILSNSWLYSPFFgIIASF 437
Cdd:MTH00041 223 SLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIIL-IIGSL 287
|
330
....*....|..
gi 1043443886 438 tagLTAFYMFRI 449
Cdd:MTH00041 288 ---LSLFFYLRI 296
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
221-421 |
1.64e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.53 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 221 INSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLfISLPLIMsfisLVGTI 300
Cdd:MTH00070 86 IMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHL-LNSNLLI----IMGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 301 TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYEAALFHLITHAYSKALLFLgsgsvihSMESLvgyspdKSQN 380
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL-------MLMNL------NSTN 226
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1043443886 381 MVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00070 227 INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
78-410 |
6.17e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 42.96 E-value: 6.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 78 NNDFSLEFgyLIDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTAMLGLV---TSSNLIQIYFFWELV 154
Cdd:MTH00110 49 SLNFSLLF--FSDSLSTPLLILTTWLLPLMLMASQHHLSK-EPLTRKKLYITMLILLQLFLImtfTATELIMFYILFEAT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 155 GMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRdLFKIANNWIPNNGINSLLTTLC--AFL 232
Cdd:MTH00110 126 LIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNNLLWLACmmAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 233 LflgavaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLFPL------FISLPLIMsfISLVGT 299
Cdd:MTH00110 205 V------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 300 ItlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYEAALFHLITHAYSKALLFLGSGSvihsmeslvGYSPD 376
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350
....*....|....*....|....*....|....
gi 1043443886 377 KSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPP 410
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-454 |
6.32e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 42.74 E-value: 6.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 222 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLFISLplimsfiSLVGTIT 301
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGL-------LICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYEAALFHLITHAYSKALLFLGSGSVIHSMESLVGYSPDKSQNM 381
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043443886 382 VLmgglrkyvpitrttFLCGTLSLCGIPPLACFWSKDEILSN-SWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSL 286
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-338 |
6.93e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 42.66 E-value: 6.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnnginSLLTTLCAFLLFLGAVAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS--------DFYLFLYWIFLMLAFLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------LARLFPLFISL-----PLIMSfISLVGTitlFLGATLA 309
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLnsnfsELFFS-ISLWGG---VMTGMIC 268
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1043443886 310 LAQRDIKRSLAYS-------------TMSQLGY-----MMLALGIGS 338
Cdd:MTH00205 269 LRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS 315
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
40-470 |
1.16e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.88 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 40 WAFPSILLLSIALVFSVHLSIQQINgssIYQYLWSWTINNdfsLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE 119
Cdd:MTH00044 16 WIVPKNKLWPISISQSSLISLLSLF---LLNNHWSSSWHN---LSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 120 GYLR--FFVYISFFNTAMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFF 197
Cdd:MTH00044 90 PNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 198 WITGSLEFrdlfkIANNWIPNNGINSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFL 276
Cdd:MTH00044 170 SSSSSLSI-----PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 277 LARLFPLF-------ISLPLImSFISLVGTITlflgATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---EAALFHL 346
Cdd:MTH00044 244 LIRLINLFslpsannISFILI-VFCCWGALIT----SIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 347 ITHAY-SKALLFLGSgsvihsmeslVGYSPDKSQNMVLMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSKDEILSNSW 425
Cdd:MTH00044 319 IAHGLvSSALFCLAN----------ILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSII 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1043443886 426 LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKE 470
Cdd:MTH00044 389 SWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISS 433
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-366 |
1.53e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.64 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 222 NSLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIFLLarlfplFISLPLIMSFislVGT 299
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLLL------FFSGEEILLF---LGI 209
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1043443886 300 ITLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS-----YEAALFHLITHAYSKALLFLGSGSVIHS 366
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR 281
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
223-417 |
6.15e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 39.38 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 223 SLLTTLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLLARLFPLfislpLIMSFISLVGTITL 302
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043443886 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALgIGSYEAALFHLITHAYSKALLFLgsgsvihsmesLVGYSPDKSQNMv 382
Cdd:MTH00011 159 LAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLML-----------LFAYLNAFSTKF- 225
|
170 180 190
....*....|....*....|....*....|....*
gi 1043443886 383 lMGGLRKYVPITRTTFLCGTLSLCGIPPLACFWSK 417
Cdd:MTH00011 226 -NSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| |
