|
Name |
Accession |
Description |
Interval |
E-value |
| lat_flg_LafA_1 |
NF033376 |
lateral flagellin LafA; This HMM describes rare second type of flagellin from E. coli and some ... |
23-326 |
8.31e-137 |
|
lateral flagellin LafA; This HMM describes rare second type of flagellin from E. coli and some closely related species, called LafA, where the familiar and common flagellin, FliC, is nearly universal and carries the H-antigen used for serotyping strains. In contrast to FliC, whose center region is highly variable, LafA shows little variability in sequence. In many E. coli strains, the Flag-2 locus either is absent or is cryptic, appearing degraded and non-functional.
Pssm-ID: 380229 [Multi-domain] Cd Length: 304 Bit Score: 390.04 E-value: 8.31e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSM 102
Cdd:NF033376 1 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGDRINSSADDAAGKQIANRLTAQSSGMDVALSNINDATAMLQTADSM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 103 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVG 182
Cdd:NF033376 81 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 183 AESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN 262
Cdd:NF033376 161 AESSDTMTVNISSQLNQLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMINSISTAMDDVSQIQSKLGASIN 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 263 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:NF033376 241 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 304
|
|
| lat_flg_LafA_2 |
NF038071 |
lateral flagellin LafA; |
24-326 |
2.74e-67 |
|
lateral flagellin LafA;
Pssm-ID: 468331 [Multi-domain] Cd Length: 283 Bit Score: 212.39 E-value: 2.74e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:NF038071 3 LSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEGAM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntGTDGLFQSAVTFQVGA 183
Cdd:NF038071 83 DEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLL--------KDGGKFEAAVTFQIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTagvsggteltasgsANQMITSISTAMDDVSQIQSKLGASINR 263
Cdd:NF038071 155 SSAEKLDVDASANVQKVNAEVVGTEKDVTAGIGTQAKA--------------ASAAITKLDTLLGDIGAVRSQFGANINR 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036414249 264 LNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:NF038071 221 LEHTVNNLSNMKENTDMAKGRIMDADFAAESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLLR 283
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
23-326 |
1.94e-48 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 166.26 E-value: 1.94e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSM 102
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 103 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntgtDGLFqSAVTFQVG 182
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLL----------NGSF-GTKSFQIG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 183 AESSDTMTVNISS------------------------------QLNTLVTDLSAISNSFSA----------------DQA 216
Cdd:PRK08869 150 ANSGEAVSLDLKSmrsdakimggvsydaeggadkdwtvgagntDLNVSFDDKGGETQAITInakagddieelatyinGQT 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 217 DTTGTA--------------GVSGGTELTAS-----------------------GSANQMITSISTAMDDVSQIQSKLGA 259
Cdd:PRK08869 230 DGVGASvsedgklqlfaagqKVSGGVSFSGGlaaelglgnatavtvddldistvGGAQQAVAVIDAALKYVDSHRADLGA 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1036414249 260 SINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK08869 310 FQNRFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
24-313 |
2.71e-45 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 154.25 E-value: 2.71e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTgtdglfqsavTFQVGA 183
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTATDTP----------PFQVDY 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSdtmtvnissqlntlvtdlsaisnsfsadqadttgtagvsggteltaSGSANQMITSISTAMDDVSQIQSKLGASINR 263
Cdd:COG1344 151 QGD----------------------------------------------AGQRTAALGALDAALDNVSSARAELGARQNR 184
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1036414249 264 LNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:COG1344 185 LESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQ 234
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
26-164 |
7.69e-25 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 97.41 E-value: 7.69e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGT 164
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGINT 139
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
26-305 |
2.88e-21 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 92.03 E-value: 2.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvSGTSNT---------------GTD 170
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIF--SGTKTDtppfsedeggevtynGDG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 171 GLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTagvSGGTELTASgsaNQMITSISTAMDDV 250
Cdd:TIGR02550 160 GQRKVQVASNRSMPIGHPGDKVFMSIPNNDKSVFSTGDDLIDALKKLEDAL---SSGDAKAAL---SASLNDLDKALDNV 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1036414249 251 SQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQ 305
Cdd:TIGR02550 234 LSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQ 288
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| lat_flg_LafA_1 |
NF033376 |
lateral flagellin LafA; This HMM describes rare second type of flagellin from E. coli and some ... |
23-326 |
8.31e-137 |
|
lateral flagellin LafA; This HMM describes rare second type of flagellin from E. coli and some closely related species, called LafA, where the familiar and common flagellin, FliC, is nearly universal and carries the H-antigen used for serotyping strains. In contrast to FliC, whose center region is highly variable, LafA shows little variability in sequence. In many E. coli strains, the Flag-2 locus either is absent or is cryptic, appearing degraded and non-functional.
Pssm-ID: 380229 [Multi-domain] Cd Length: 304 Bit Score: 390.04 E-value: 8.31e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSM 102
Cdd:NF033376 1 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGDRINSSADDAAGKQIANRLTAQSSGMDVALSNINDATAMLQTADSM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 103 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVG 182
Cdd:NF033376 81 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 183 AESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN 262
Cdd:NF033376 161 AESSDTMTVNISSQLNQLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMINSISTAMDDVSQIQSKLGASIN 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 263 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:NF033376 241 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 304
|
|
| lat_flg_LafA_2 |
NF038071 |
lateral flagellin LafA; |
24-326 |
2.74e-67 |
|
lateral flagellin LafA;
Pssm-ID: 468331 [Multi-domain] Cd Length: 283 Bit Score: 212.39 E-value: 2.74e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:NF038071 3 LSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEGAM 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntGTDGLFQSAVTFQVGA 183
Cdd:NF038071 83 DEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLL--------KDGGKFEAAVTFQIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTagvsggteltasgsANQMITSISTAMDDVSQIQSKLGASINR 263
Cdd:NF038071 155 SSAEKLDVDASANVQKVNAEVVGTEKDVTAGIGTQAKA--------------ASAAITKLDTLLGDIGAVRSQFGANINR 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036414249 264 LNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:NF038071 221 LEHTVNNLSNMKENTDMAKGRIMDADFAAESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLLR 283
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
23-326 |
1.94e-48 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 166.26 E-value: 1.94e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSM 102
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 103 FDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntgtDGLFqSAVTFQVG 182
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLL----------NGSF-GTKSFQIG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 183 AESSDTMTVNISS------------------------------QLNTLVTDLSAISNSFSA----------------DQA 216
Cdd:PRK08869 150 ANSGEAVSLDLKSmrsdakimggvsydaeggadkdwtvgagntDLNVSFDDKGGETQAITInakagddieelatyinGQT 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 217 DTTGTA--------------GVSGGTELTAS-----------------------GSANQMITSISTAMDDVSQIQSKLGA 259
Cdd:PRK08869 230 DGVGASvsedgklqlfaagqKVSGGVSFSGGlaaelglgnatavtvddldistvGGAQQAVAVIDAALKYVDSHRADLGA 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1036414249 260 SINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK08869 310 FQNRFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
24-313 |
2.71e-45 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 154.25 E-value: 2.71e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTgtdglfqsavTFQVGA 183
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAGTATDTP----------PFQVDY 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSdtmtvnissqlntlvtdlsaisnsfsadqadttgtagvsggteltaSGSANQMITSISTAMDDVSQIQSKLGASINR 263
Cdd:COG1344 151 QGD----------------------------------------------AGQRTAALGALDAALDNVSSARAELGARQNR 184
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1036414249 264 LNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:COG1344 185 LESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQ 234
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
22-326 |
9.14e-40 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 141.17 E-value: 9.14e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 22 IMLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADS 101
Cdd:PRK12802 1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 102 MFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGtsntgtdglfqSAVTFQV 181
Cdd:PRK12802 81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDGSA-----------GTMTFQV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 182 GAESSDTMTVNISsqlntlvtdlsaISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASI 261
Cdd:PRK12802 150 GANTGQSNQITFG------------LSASFDATGLGVGSGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQ 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1036414249 262 NRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK12802 218 NRLQSTISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
24-326 |
1.32e-38 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 138.42 E-value: 1.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:PRK12807 1 MRINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGA 183
Cdd:PRK12807 81 NSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSDTMTVNIssQLNTLvtdlsaisnsfsadQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINR 263
Cdd:PRK12807 161 SSATNQQITI--KLANT--------------TAEKLGIDATTSNISISGAASALAAISALNTALNTVAGNRATLGATLNR 224
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036414249 264 LNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK12807 225 LDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 287
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
24-326 |
5.26e-36 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 131.66 E-value: 5.26e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:PRK12804 1 MRINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAAN-GTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLfgVSGTSNTGTDGLFQSAVTFQVG 182
Cdd:PRK12804 81 TETHSILQRVRELVVQAGNtGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKL--LDGTFKPAAPAAGTKSLTFQIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 183 AESSDTMTVNI----SSQLNTLVTDLSAISNSFSADqADTTGTAGVSGgtelTASGSANQMITSISTAMDDVSQIQSKLG 258
Cdd:PRK12804 159 ANAAQQLSVNIeamsADALGVKDTDGTLVTGKSVSD-IDVTKFANAAA----AADGGFDDQLKIVDGAIKQVSDQRSKLG 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036414249 259 ASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK12804 234 AVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 301
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
26-313 |
5.71e-31 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 119.88 E-value: 5.71e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK06819 5 INTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGALNE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDE----YDEL-----------------------------GQQMSDMLQ--N 150
Cdd:PRK06819 85 INNNLQRVRELTVQAQNGSNSSSDLDSIQDEisqrLAEIdrvsdqtqfngvkvlaedttmsiqvgandGETIDINLQkiD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 151 TTYGGTNLFGVSGTSNTGTDGLF--QSAVTFQVGAESSDTMTVNISSQ--LNTLVTDLSAIS------------------ 208
Cdd:PRK06819 165 SKSLGLGSFSVSGVSGALTSLTFtdTALDTSVTGVTTTTALDFSDISTfaKGATVHGIGDVGtdgayadgyvirttdgkq 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 209 NSFSADQAD--------------TTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSM 274
Cdd:PRK06819 245 YKGEVDATNgkvtfaddangdpiTDATKLEAAAQFSPAGKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLNNT 324
|
330 340 350
....*....|....*....|....*....|....*....
gi 1036414249 275 QDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:PRK06819 325 VTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 363
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
26-164 |
7.69e-25 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 97.41 E-value: 7.69e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGT 164
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLAGINT 139
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
24-325 |
8.17e-24 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 98.79 E-value: 8.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 24 LSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMF 103
Cdd:PRK12805 1 MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 104 DEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTgtdglfqSAVTFQVGA 183
Cdd:PRK12805 81 SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAA-------TQVSIQASD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 184 ESSDTMTVNISSqlntlvtdlsaiSNSFSADQADTTGTAGVSGGTELTA--SGSANQMITSISTAMDDVSQIQSKLGASI 261
Cdd:PRK12805 154 KANDLINIDLFN------------AKGLSAGTITLGSGSTVAGYSALSVadADSSQEATEAIDELINNISNGRALLGAGM 221
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 262 NRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLL 325
Cdd:PRK12805 222 SRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
26-305 |
2.88e-21 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 92.03 E-value: 2.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvSGTSNT---------------GTD 170
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIF--SGTKTDtppfsedeggevtynGDG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 171 GLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTagvSGGTELTASgsaNQMITSISTAMDDV 250
Cdd:TIGR02550 160 GQRKVQVASNRSMPIGHPGDKVFMSIPNNDKSVFSTGDDLIDALKKLEDAL---SSGDAKAAL---SASLNDLDKALDNV 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1036414249 251 SQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQ 305
Cdd:TIGR02550 234 LSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQ 288
|
|
| PRK12808 |
PRK12808 |
flagellin; Provisional |
26-158 |
3.87e-21 |
|
flagellin; Provisional
Pssm-ID: 237212 [Multi-domain] Cd Length: 476 Bit Score: 93.48 E-value: 3.87e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK12808 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNL 158
Cdd:PRK12808 83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNL 135
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
26-326 |
7.17e-20 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 88.71 E-value: 7.17e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK12803 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLNE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFG-------VSGTSNTGTDGLFQSAVT 178
Cdd:PRK12803 83 VEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSnksaaqnVRTAEELGMQPAKINTPA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 179 FQVGAESSDTMTVNI-SSQLNTLVTDLSA--ISNSFSADQADTTGTA----------------------GVSGGTELTAS 233
Cdd:PRK12803 163 SLSGSQASWTLRVHVgANQDEAIAVNIYAanVANLFSGEGAQQAAPVqegaqqegaqaapapaaapaqgGVNSPVNVTTT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 234 GSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:PRK12803 243 VDANMSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYAIENLKASYAQIKDATMTDEVVASTTNSILTQSAMAMIAQ 322
|
330
....*....|...
gi 1036414249 314 SNSMSSMVSSLLQ 326
Cdd:PRK12803 323 ANQVPQYVLSLLR 335
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
26-237 |
1.05e-19 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 89.36 E-value: 1.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK12806 5 INTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAMQE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntgtDGLFQSAVtFQVGAES 185
Cdd:PRK12806 85 TTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRIL----------DGSFSGAS-FQVGANS 153
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1036414249 186 SDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSAN 237
Cdd:PRK12806 154 NQTINFSIGSIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSAN 205
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
26-292 |
1.17e-18 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 86.33 E-value: 1.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK08026 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTsntgtdglfqsaVTFQVGAES 185
Cdd:PRK08026 85 INNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGS------------MKIQVGAND 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 186 SDTMTVN---ISSQ---LNTL-------VTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANqmitsISTAMDDVSQ 252
Cdd:PRK08026 153 GETITIDlkkIDSDtlgLDGFnvngkgtVANTAATVSDLTAAGATLDTTGLYDVKTKNAALTTAD-----ALAKLGDGDK 227
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1036414249 253 IQSKLGASINRLNDTANN--LTSMQDNTEVAIGNIMDTDYAT 292
Cdd:PRK08026 228 VTATATGGDYTYNAKSGKyqAADLAATLTPDVGGTAGASYTI 269
|
|
| PRK12584 |
PRK12584 |
flagellin A; Reviewed |
26-195 |
8.22e-18 |
|
flagellin A; Reviewed
Pssm-ID: 237146 [Multi-domain] Cd Length: 510 Bit Score: 83.80 E-value: 8.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK12584 5 VNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNtgtdglfqsavTFQVGAES 185
Cdd:PRK12584 85 QLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNK-----------EFQVGAYS 153
|
170
....*....|
gi 1036414249 186 SDTMTVNISS 195
Cdd:PRK12584 154 NQSIKASIGS 163
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
26-193 |
3.32e-17 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 82.34 E-value: 3.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK08411 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNtgtdglfqsavTFQVGAES 185
Cdd:PRK08411 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFTNQ-----------EFQIGASS 153
|
....*...
gi 1036414249 186 SDTMTVNI 193
Cdd:PRK08411 154 NQTVKATI 161
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
26-231 |
1.64e-16 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 79.91 E-value: 1.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK13588 5 INTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvsgtsntgtDGLFqSAVTFQVGAES 185
Cdd:PRK13588 85 QIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQML----------SGSF-SNKEFQIGAYS 153
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1036414249 186 SDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTELT 231
Cdd:PRK13588 154 NTTVKASIGATSSDKIGHVRMETSSFSGEGMLASAAAQNLTEVGLN 199
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
50-301 |
6.37e-16 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 76.96 E-value: 6.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 50 MERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDD 129
Cdd:PRK07701 27 QEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQATDILQRARELAVQAANGTNTQTD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 130 LQAMQDEYDELGQQMSDmLQNTTYGGTNLFG--------VSGTSNTGTDGLFQSAVTFQVGAesSDTMTVNI-------- 193
Cdd:PRK07701 107 RQAIAQEIEQLKEQLIQ-IANTQYNGRYIFNgtktdtppVTDDGDNIENSTDSGDIEFEIAK--GNTINVNVpgdkafgg 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 194 -SSQLNTLVTDLSAISNSFsaDQADTTGtagvsggteltasgsANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLT 272
Cdd:PRK07701 184 qSGGGSNLFEMLDNLENAL--DSGDTQG---------------VSNLLSDIDQHIDNVLAVRAELGARSNRLELIENRLS 246
|
250 260
....*....|....*....|....*....
gi 1036414249 273 SMQDNTEVAIGNIMDTDYATEASNMTKQQ 301
Cdd:PRK07701 247 DQEVNATKLLSDNEDVDLAEVITDLKTQE 275
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
26-195 |
7.50e-15 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 75.06 E-value: 7.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK13589 5 INTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNtgtdglfqsavTFQVGAES 185
Cdd:PRK13589 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFTNQ-----------EFQIGASS 153
|
170
....*....|
gi 1036414249 186 SDTMTVNISS 195
Cdd:PRK13589 154 NQTIKATIGA 163
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
240-313 |
3.72e-13 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 64.27 E-value: 3.72e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 240 ITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQ 74
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
26-306 |
1.43e-12 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 66.96 E-value: 1.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 26 INTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDE 105
Cdd:PRK07192 3 ISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 106 MSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFgvSGT-SNTGTDGLFQSAVTF----- 179
Cdd:PRK07192 83 VNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGNYLF--SGTaSNTQPITFDAAGGTYtyngn 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 180 ----QVGAESSDTMTVNISSQ----------LNTLVTDLSAISNSfSADQADTTGTAGVSggteltasgsanQMITSIST 245
Cdd:PRK07192 161 sdqrQVQVGEGVQMPVNVTGQsvfqgggldvFNTLDKLIDLLETP-ALPAADAALTAAVD------------EALGAIDD 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1036414249 246 AMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQT 306
Cdd:PRK07192 228 ALDNVLTVRTELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDYAEALSDLSNQMAALEA 288
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
51-165 |
8.77e-11 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 62.40 E-value: 8.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 51 ERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDL 130
Cdd:PRK06663 29 NQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYLQSITNILQRARELAVQGANGTYQADDK 108
|
90 100 110
....*....|....*....|....*....|....*
gi 1036414249 131 QAMQDEYDELGQQMSDMLQNTTYGGTNLFgvSGTS 165
Cdd:PRK06663 109 KKIAKEIDELLEDLVDIANARGADGYSIF--SGTK 141
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
36-305 |
2.16e-10 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 61.08 E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 36 VNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDVLGRMKD 115
Cdd:PRK08870 13 VNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTLGSVEDLLQRARE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 116 LSTQAANGTYSDDDLQAMQDEYDELGQQMSDmLQNTT-------YGGT-------------------------------- 156
Cdd:PRK08870 93 LVVQAGNGSLSDSDRQAIATELQGLRDQLLN-LANSKdgsgnylFAGTqsgtqpfafdasgnvvysgdqgqrqvqvadsv 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 157 ----------------NLFGV----SGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISS----QLNTLVTDLSAisNSFS 212
Cdd:PRK08870 172 qvatndpgdevfmsvpNGGGDyvpnANASNTGTGLLGSASITDPSDPVNGDTYTITFTDngagGTNTYVTDSST--GTVV 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 213 ADQADTTGTAGVSGGTELTASGSA--------------------------------------------NQMITSISTAMD 248
Cdd:PRK08870 250 TAQAYDAGQPINFNGVEVQISGAPaagdsftltpapqasifdtlddaiaalespvstpaadaalqnalAQALRNLDNALN 329
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1036414249 249 DVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQ 305
Cdd:PRK08870 330 NVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQ 386
|
|
| PRK12687 |
PRK12687 |
flagellin; Reviewed |
23-311 |
7.26e-10 |
|
flagellin; Reviewed
Pssm-ID: 105853 [Multi-domain] Cd Length: 311 Bit Score: 59.29 E-value: 7.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSgmgvALSNINDATAM-LQTADS 101
Cdd:PRK12687 1 MSSLLTNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNE----ALSAVSDALGLgAATVDT 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 102 MFDEMSDVLGRMKD----LSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGV--SGTSNTGTDGLFqS 175
Cdd:PRK12687 77 MYTALTSVVGDSKSgltaLKAKLVAAREPGIDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVdsSPSSYNATKSVV-S 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 176 AVTFQVGAESSDTMTVNISSqlnTLVTDLSAISNSFSADQADTTGTAGVSGGT----ELTASGS----ANQMITSISTAM 247
Cdd:PRK12687 156 SFTRVGGTVAIKTIDVNIAK---LALYDTNGSSTTGILDKTVTVGTATASVSSidihLLTDSATdltkLDGYIGIVDQAL 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 248 DDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITML 311
Cdd:PRK12687 233 GSVTQASADLGATKTRIDSNSNFVKSLRDAIDRGVGQLVDADMNAESTRLQALQTQQQLGIQAL 296
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
118-313 |
6.23e-07 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 50.90 E-value: 6.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 118 TQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTY-----GGTNLFGVSGTSNTG--TDGLFQSAVTFQVGAESSDTMT 190
Cdd:PRK08026 300 TTNNAGAATKATLDALKKTASEGAATAKAALAAAGVtvadgVTAKTVKMSYTDKNGkvIDGGYAVKTGDDYYAADYDEIT 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 191 VNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQM-------------ITSISTAMDDVSQIQSKL 257
Cdd:PRK08026 380 GAISATTTYYTAKDGTTKTAANKLGGADGKTEVVTIDGKTYVASDGKQTtlaeaaatttenpLAALDAAIASIDKFRSSL 459
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1036414249 258 GASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQ 313
Cdd:PRK08026 460 GAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAK 515
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
160-326 |
4.32e-06 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 48.10 E-value: 4.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 160 GVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVsggtelTASGSANQM 239
Cdd:PRK13589 416 GYSVGSGKNYSVGLSQGIQIISSASAMSTVYNVSAGSGFSSGSGLSQFATMKTTAAGVKDETAGV------TTLKGAMAV 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 240 ITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSS 319
Cdd:PRK13589 490 MDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQ 569
|
....*..
gi 1036414249 320 MVSSLLQ 326
Cdd:PRK13589 570 NVLKLLQ 576
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
51-195 |
4.80e-06 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 47.81 E-value: 4.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 51 ERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDL 130
Cdd:PRK12717 28 EQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELAVSAGNGGLTDADR 107
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036414249 131 QAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNT----GTDGLF-----QSAVTFQVGaessDTMTVNISS 195
Cdd:PRK12717 108 KAIASELKQIEAQLLGLMNSKDANGQYLFAGSKSDTPpyvrNADGTYsyqgdQTQLSLQVG----DTLNLAAND 177
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
202-326 |
1.57e-05 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 46.52 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 202 TDLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVA 281
Cdd:PRK08411 448 SGFSSGSNLSQFAAMKTTAANVKDETAGVTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAA 527
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1036414249 282 IGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK08411 528 ESQIRDVDFAAESANYSKANILAQSGSYAMAQANAVQQNVLRLLQ 572
|
|
| flgL |
PRK08913 |
flagellin; |
87-305 |
4.33e-05 |
|
flagellin;
Pssm-ID: 236349 [Multi-domain] Cd Length: 301 Bit Score: 44.39 E-value: 4.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 87 SNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDlqAMQDEYDELGQQMSDMLqNTTYGGTNLFGVSGTSN 166
Cdd:PRK08913 66 DAATLAQSKVQVMYSAVGQIADLAQQLRSSLSAASTGTSTDAT--SAAASAQQALTQLATLL-NTQYGGQYVFAGADTTT 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 167 TGTDglFQSAVTFQVGAESSDTMTVNISSQLNTL-VTDLSAISNSFSADQA---DTTGTAGVSGGTELTASGSANQMITS 242
Cdd:PRK08913 143 APVD--LSSFAAGADSASSADTSYYQGDDTLTSVrVSATQGVSYGVTADNSafeQLMRALMLVANSSSLSSSTLSQALDL 220
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036414249 243 ISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQ 305
Cdd:PRK08913 221 ASTAVDDLGDVQSRLGNAASRLTAASSRQTEYKSFAETLLSDLTGVDVAAVTAQLSTYQTQLT 283
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
215-326 |
5.85e-05 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 44.47 E-value: 5.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 215 QADTTGTAGVSGGTELTASGSANQMITSISTAMDdvsQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTDYATEA 294
Cdd:PRK13588 406 QAETNSQGIGAGVTSLKGAMIVMDMAESARTQLD---KIRSDMGSVQMQLVSTINNISVTQVNVKAAESQIRDVDFAEES 482
|
90 100 110
....*....|....*....|....*....|..
gi 1036414249 295 SNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
Cdd:PRK13588 483 ANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
|
|
| flgL |
PRK08073 |
flagellar hook-associated protein 3; |
76-303 |
9.60e-04 |
|
flagellar hook-associated protein 3;
Pssm-ID: 181222 [Multi-domain] Cd Length: 287 Bit Score: 40.35 E-value: 9.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 76 TAQSSGMGVALSNIN-------DATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSdML 148
Cdd:PRK08073 46 ASKSFAIQHSLANIEqmqkdvaDSKNVLNQTENTLSGMSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVV-YL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 149 QNTTYGGTNLFGVSGTSNT--GTDGLFQSA---VTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSadQADTTGTAG 223
Cdd:PRK08073 125 ANTKEQGRYVFGGDSAEKKpfTEDGTYQGGtedVNWRLNDGYEVKAFRNGEALLTPVINTLKKMVDAMQ--TGDQKALQP 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 224 VSGGTELTASGSANQMiTSISTAMDDVSQIQSKLGASINRLNDTANNLTSMqdNTEVAIGNIMDTDYATEA-----SNMT 298
Cdd:PRK08073 203 LLEENKKNLDIIINRT-TEVGGTMNTVETFKTILSEQNLALQENRKEIEDV--DLAVAISDLAYINATYEAtlkavSTMS 279
|
....*
gi 1036414249 299 KQQVL 303
Cdd:PRK08073 280 KTSIL 284
|
|
| PRK14692 |
PRK14692 |
flagellar hook-associated protein FlgL; |
25-171 |
4.84e-03 |
|
flagellar hook-associated protein FlgL;
Pssm-ID: 173155 [Multi-domain] Cd Length: 749 Bit Score: 38.79 E-value: 4.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036414249 25 SINTNNASMAAVNAISksssslstsmERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFD 104
Cdd:PRK14692 12 SVNNSMGGQSALYQIS----------QQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQ 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1036414249 105 EMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDmLQNTTYGGTNLFGVSGTSNTGTDG 171
Cdd:PRK14692 82 DMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQ-LANTSVNGQYLFAGSQVANKPFDS 147
|
|
| |
