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Conserved domains on  [gi|1033206399|gb|ANH55837|]
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NADH dehydrogenase subunit 3 [Hypogeophis brevis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.70e-57

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 173.18  E-value: 1.70e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.70e-57

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 173.18  E-value: 1.70e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 7.17e-32

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 107.51  E-value: 7.17e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399  18 LVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLMTPLMPLFFSTLI-ISL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 1033206399  97 LTLGLIYEWLQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-112 1.34e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 92.49  E-value: 1.34e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   2 ITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLM 81
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1033206399  82 TPLMPLFFSTLI-ISLLTLGLIYEWLQGGLEW 112
Cdd:COG0838    86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.70e-57

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 173.18  E-value: 1.70e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00136    3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00136   83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-114 2.20e-56

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 170.17  E-value: 2.20e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 6.58e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 148.88  E-value: 6.58e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWA 113
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-114 5.00e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 144.31  E-value: 5.00e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   2 ITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLM 81
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTN 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1033206399  82 TPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00106   83 NLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-114 2.88e-40

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 129.72  E-value: 2.88e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQL 80
Cdd:MTH00042    3 NLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  81 MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00042   83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-112 6.11e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 118.46  E-value: 6.11e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   2 ITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLM 81
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1033206399  82 TPlmPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:MTH00203   84 SL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-111 7.17e-32

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 107.51  E-value: 7.17e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399  18 LVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLMTPLMPLFFSTLI-ISL 96
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 1033206399  97 LTLGLIYEWLQGGLE 111
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-114 1.48e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 102.63  E-value: 1.48e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWL-PNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQ 79
Cdd:MTH00148    3 SILLSLLFALILSPVLLLLGLVLsKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLG 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1033206399  80 LMTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00148   83 SSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-112 4.58e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 98.70  E-value: 4.58e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWL-PNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQ 79
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1033206399  80 LMTPLMPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 2-112 9.90e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 95.55  E-value: 9.90e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   2 ITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLM 81
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQI 87

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1033206399  82 TpLMPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:MTH00055   88 G-LFGFWVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-114 2.10e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 94.67  E-value: 2.10e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPN-MVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQ 79
Cdd:MTH00202    3 LILFMSILSILISSLLFLVSWMLSFrSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1033206399  80 LMTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWAE 114
Cdd:MTH00202   83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-112 1.34e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 92.49  E-value: 1.34e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   2 ITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLM 81
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1033206399  82 TPLMPLFFSTLI-ISLLTLGLIYEWLQGGLEW 112
Cdd:COG0838    86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-113 3.07e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 91.46  E-value: 3.07e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   9 AIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLMTPLMPLF 88
Cdd:PRK06602   18 AIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLF--PWAVSFREIGWLGF 95

                          90       100
                  ....*....|....*....|....*.
gi 1033206399  89 FSTLI-ISLLTLGLIYEWLQGGLEWA 113
Cdd:PRK06602   96 VEAMIfILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 6-112 1.74e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 89.35  E-value: 1.74e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   6 LCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWaSQLMTPLM 85
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLF--PW-CVLYNQIA 83

                          90       100
                  ....*....|....*....|....*....
gi 1033206399  86 PLFFSTLIISL--LTLGLIYEWLQGGLEW 112
Cdd:MTH00018   84 PFGFWTMVGFLfiLTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 8.92e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 85.30  E-value: 8.92e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLP-NMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQ 79
Cdd:MTH00012    3 LMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1033206399  80 LMTPLMPLFFSTLIISLLTLGLIYEWLQGGLEWA 113
Cdd:MTH00012   83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 10-112 3.47e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.12  E-value: 3.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399  10 IIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLMTpLMPLFF 89
Cdd:MTH00030   21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLN-LFSFWI 99

                          90       100
                  ....*....|....*....|...
gi 1033206399  90 STLIISLLTLGLIYEWLQGGLEW 112
Cdd:MTH00030  100 VYTFLIVLAIGLAYEWIKGGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
6-112 1.06e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 54.36  E-value: 1.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   6 LCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLMTpLM 85
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG-LF 94

                          90       100
                  ....*....|....*....|....*..
gi 1033206399  86 PLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:PRK07756   95 ALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ndhC CHL00022
NADH dehydrogenase subunit 3
 10-112 1.26e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.22  E-value: 1.26e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399  10 IIITMALALVSFWLPNMVPDT----EKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptPWASQLMTPLM 85
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPIskgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY--PWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*...
gi 1033206399  86 PLFFSTLI-ISLLTLGLIYEWLQGGLEW 112
Cdd:CHL00022   92 SAFIEALIfVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-112 1.31e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 54.29  E-value: 1.31e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   1 MITLALCTAIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARlPFSMRFFLVAILFLLFDLEIALLLptPWASQL 80
Cdd:PRK08489   16 LLVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMF--PWAVDF 92

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1033206399  81 -MTPLMPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:PRK08489   93 kLLGLFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 11-112 2.36e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.52  E-value: 2.36e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399  11 IITMALALVSFWLPNMV----PDTEKLSPYECGFDPSSSARLP--FSMRFFLVAILFLLFDLEIALLLPtpWASQL-MTP 83
Cdd:PRK07928   12 ALAAAFAVVSVVVASLVgpkrYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFdALG 89

                          90       100
                  ....*....|....*....|....*....
gi 1033206399  84 LMPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:PRK07928   90 VFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 9-112 3.90e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.19  E-value: 3.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1033206399   9 AIIITMALALVSFWLPNMVPDTEKLSPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLptpwasQLMTPLMPLF 88
Cdd:MTH00092   11 TLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL------GLLVSDFSSL 84

                          90       100
                  ....*....|....*....|....*
gi 1033206399  89 FSTLIISLLTLGLIY-EWLQGGLEW 112
Cdd:MTH00092   85 ISFFMLMIFIFFGFYmEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-112 1.64e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.65  E-value: 1.64e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1033206399  34 SPYECGFDPSSSARLPFSMRFFLVAILFLLFDLEIALLLPTPWASQLmtpLMPLFFSTLIISLLTLGLIYEWLQGGLEW 112
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLL---FYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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