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Conserved domains on  [gi|1022695254|gb|ANA77293|]
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cytochrome b, partial (mitochondrion) [Bleda notatus]

Protein Classification

cytochrome b( domain architecture ID 11475906)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-318 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 651.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00119   51 FLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFV 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00119  131 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPL 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00119  211 GLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00119  291 GVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFP 368
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-318 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 651.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00119   51 FLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFV 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00119  131 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPL 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00119  211 GLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00119  291 GVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFP 368
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-318 4.41e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 350.63  E-value: 4.41e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSY-----LNketWNTGVILLLTLM 75
Cdd:COG1290    59 FLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTM 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  76 ATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIH-FLLPFVIVGVTLVHLTLLHET 154
Cdd:COG1290   136 AEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRH 215

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 155 GSNNPLGI----PSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNllGDPENFTPANPLATPPHIKPEWYFLFAYA 230
Cdd:COG1290   216 GHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYG 293

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 231 ILRSIP--NKLGGVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVehPFIIIGQLASLS 308
Cdd:COG1290   294 ILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVT 371

                         330
                  ....*....|
gi 1022695254 309 YFTIILVLFP 318
Cdd:COG1290   372 YFAFFLIVLP 381
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-157 5.45e-74

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 226.10  E-value: 5.45e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLN--KETWNTGVILLLTLMATA 78
Cdd:cd00284    42 FLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKKprELTWVIGVILLLLTMATA 121

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1022695254  79 FVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSN 157
Cdd:cd00284   122 FMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
2-155 5.58e-66

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 205.31  E-value: 5.58e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYG--SYLNKETWNTGVILLLTLMATAF 79
Cdd:pfam00033  34 LAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAF 113

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1022695254  80 VGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETG 155
Cdd:pfam00033 114 IGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 190-290 5.70e-12

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 62.89  E-value: 5.70e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 190 LATLALFYPNLLGDPenftpANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLL-HVSKLRSMTF 268
Cdd:TIGR01156  51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFR 125

                          90       100
                  ....*....|....*....|..
gi 1022695254 269 RPLSQILFwtlVANLLVLTWVG 290
Cdd:TIGR01156 126 RPVATTVF---LFGTVVALWLG 144
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
 1-318 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 651.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00119   51 FLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFV 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00119  131 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPL 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00119  211 GLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00119  291 GVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFP 368
CYTB MTH00100
cytochrome b; Provisional
 2-318 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 595.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00100   51 LAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00100  131 YVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSG 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00100  211 IPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00100  291 VLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMP 367
CYTB MTH00131
cytochrome b; Provisional
 2-318 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 592.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00131   51 LAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00131  131 YVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLG 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00131  211 LNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00131  291 VLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMP 367
CYTB MTH00074
cytochrome b; Provisional
 2-318 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 566.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00074   52 LAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVG 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00074  132 YVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTG 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00074  212 LNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGG 291

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00074  292 VLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIP 368
CYTB MTH00191
cytochrome b; Provisional
 1-318 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 556.84  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00191   47 FLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFL 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00191  127 GYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPL 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00191  207 GLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLG 286

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00191  287 GVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
CYTB MTH00156
cytochrome b; Provisional
 2-317 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 550.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00156   41 LAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLG 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00156  121 YVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLG 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00156  201 LNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGG 280

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLF 317
Cdd:MTH00156  281 VIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00145
cytochrome b; Provisional
 1-316 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 536.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00145   51 FLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFL 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00145  131 GYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPL 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00145  211 GLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVL 316
Cdd:MTH00145  291 GVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL 366
CYTB MTH00034
cytochrome b; Validated
 2-318 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 531.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00034   51 LAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00034  131 YVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTG 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00034  211 LNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00034  291 VIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFP 367
CYTB MTH00016
cytochrome b; Validated
 1-316 1.69e-179

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 500.74  E-value: 1.69e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00016   51 FLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFL 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00016  131 GYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPL 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00016  211 GVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVL 316
Cdd:MTH00016  291 GVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
CYTB MTH00022
cytochrome b; Validated
 2-318 1.23e-162

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 458.01  E-value: 1.23e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00022   50 LSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMG 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00022  130 YVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIG 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00022  210 LNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGG 289

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00022  290 VVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIP 366
CYTB MTH00053
cytochrome b; Provisional
 2-318 6.97e-159

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 448.77  E-value: 6.97e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFVG 81
Cdd:MTH00053   52 LAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIG 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  82 YVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPLG 161
Cdd:MTH00053  132 YVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIG 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 162 IPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGG 241
Cdd:MTH00053  212 VRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGG 291

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 242 VLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFP 318
Cdd:MTH00053  292 VVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMP 368
CYTB MTH00224
cytochrome b; Provisional
 1-315 1.85e-152

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 432.42  E-value: 1.85e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00224   51 FLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFL 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00224  131 GYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPI 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00224  211 GINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLG 290

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1022695254 241 GVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILV 315
Cdd:MTH00224  291 GVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
CYTB MTH00033
cytochrome b; Provisional
 1-318 2.66e-122

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 355.78  E-value: 2.66e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00033   47 LLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFI 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00033  127 GYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPL 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLAL--FYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNK 238
Cdd:MTH00033  207 GLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNK 286

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 239 LGGVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPV-EHPFIIIGQLASLSYFTIILVLF 317
Cdd:MTH00033  287 LGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLV 366


                  .
gi 1022695254 318 P 318
Cdd:MTH00033  367 P 367
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-318 4.41e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 350.63  E-value: 4.41e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSY-----LNketWNTGVILLLTLM 75
Cdd:COG1290    59 FLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTM 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  76 ATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIH-FLLPFVIVGVTLVHLTLLHET 154
Cdd:COG1290   136 AEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRH 215

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 155 GSNNPLGI----PSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNllGDPENFTPANPLATPPHIKPEWYFLFAYA 230
Cdd:COG1290   216 GHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYG 293

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 231 ILRSIP--NKLGGVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTWVGSQPVehPFIIIGQLASLS 308
Cdd:COG1290   294 ILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVT 371

                         330
                  ....*....|
gi 1022695254 309 YFTIILVLFP 318
Cdd:COG1290   372 YFAFFLIVLP 381
CYTB MTH00086
cytochrome b; Provisional
 1-317 2.63e-108

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 319.19  E-value: 2.63e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00086   39 FLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFM 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00086  119 GYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSL 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSDCDKIPFHPYYSTKDILGFTLVFIpLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLG 240
Cdd:MTH00086  199 YCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVL 277

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1022695254 241 GVLALAASVLVLFLIPLlhVSKLRSMtFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLF 317
Cdd:MTH00086  278 GVIALLMSIVVFYFFIF--VNNYTSC-LNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
CYTB MTH00046
cytochrome b; Validated
 1-317 3.29e-84

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 257.60  E-value: 3.29e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKETWNTGVILLLTLMATAFV 80
Cdd:MTH00046   41 LLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFL 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  81 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSNNPL 160
Cdd:MTH00046  121 GYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPL 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 161 GIPSD-CDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKL 239
Cdd:MTH00046  201 FSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKI 280

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 240 GGvLALAASVLVLFLIPLLHVSKLRSMtfrpLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLASLSyftIILVLF 317
Cdd:MTH00046  281 GG-LVLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFSVL---MVLLLF 350
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-157 5.45e-74

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 226.10  E-value: 5.45e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   1 LLSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLN--KETWNTGVILLLTLMATA 78
Cdd:cd00284    42 FLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKKprELTWVIGVILLLLTMATA 121

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1022695254  79 FVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETGSN 157
Cdd:cd00284   122 FMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
2-155 5.58e-66

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 205.31  E-value: 5.58e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYG--SYLNKETWNTGVILLLTLMATAF 79
Cdd:pfam00033  34 LAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAF 113

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1022695254  80 VGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIHFLLPFVIVGVTLVHLTLLHETG 155
Cdd:pfam00033 114 IGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 158-305 1.49e-58

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 184.77  E-value: 1.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 158 NPLGIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLALFYPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPN 237
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022695254 238 KLGGVLALAASVLVLFLIPLLHVSKLRSmTFRPLSQILFWTLVANLLVLTWVGSQPVEHPFIIIGQLA 305
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
209-309 7.57e-48

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 155.71  E-value: 7.57e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 209 PANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLLHVSKLRSMTFRPLSQILFWTLVANLLVLTW 288
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1022695254 289 VGSQPVEHPFIIIGQLASLSY 309
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
39-204 1.35e-43

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 147.39  E-value: 1.35e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  39 SLFFMCIYIHIGRGIYYGSYLNKE--TWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAW 116
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 117 GGFSVDNPTLTRFFAIHF-LLPFVIVGVTLVHLTLLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFTLVFIPLATLAL 195
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1022695254 196 FYPNLLGDP 204
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 2-160 3.55e-32

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 119.43  E-value: 3.55e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKE--TWNTGVILLLTLMATAF 79
Cdd:PRK03735   62 LTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVGLGF 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  80 VGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIH-FLLPFVIVGVTLVHLTLLHETGSNN 158
Cdd:PRK03735  142 TGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISG 221


                  ..
gi 1022695254 159 PL 160
Cdd:PRK03735  222 PL 223
petB CHL00070
cytochrome b6
 2-160 2.85e-29

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 111.35  E-value: 2.85e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254   2 LSMHYTADTALAFASVSHICRDVQFGWLIRNLHANGASLFFMCIYIHIGRGIYYGSYLNKE--TWNTGVILLLTLMATAF 79
Cdd:CHL00070   54 MTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGV 133

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254  80 VGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWAWGGFSVDNPTLTRFFAIH-FLLPFVIVGVTLVHLTLLHETGSNN 158
Cdd:CHL00070  134 TGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISG 213


                  ..
gi 1022695254 159 PL 160
Cdd:CHL00070  214 PL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 180-281 1.32e-13

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 67.33  E-value: 1.32e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 180 ILGFTLVFIPLATLAlfyPNLLGDPenftpANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLL- 258
Cdd:CHL00058   44 ILGTIACNVGLAVLE---PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115

                          90       100
                  ....*....|....*....|....*
gi 1022695254 259 HVSKLRSMTFRPLSQI--LFWTLVA 281
Cdd:CHL00058  116 NVNKFQNPFRRPVATTvfLIGTAVA 140
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 193-290 5.52e-13

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 65.59  E-value: 5.52e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 193 LALFYPNLLGDPenftpANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLL-HVSKLRSMTFRPL 271
Cdd:COG5679    55 LAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQNPFRRPV 129

                          90
                  ....*....|....*....
gi 1022695254 272 SQILFwtlVANLLVLTWVG 290
Cdd:COG5679   130 ATAVF---LFGTLVTLWLG 145
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 190-290 5.70e-12

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 62.89  E-value: 5.70e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022695254 190 LATLALFYPNLLGDPenftpANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLL-HVSKLRSMTF 268
Cdd:TIGR01156  51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFR 125

                          90       100
                  ....*....|....*....|..
gi 1022695254 269 RPLSQILFwtlVANLLVLTWVG 290
Cdd:TIGR01156 126 RPVATTVF---LFGTVVALWLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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