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Conserved domains on  [gi|1016053513|emb|CZT99506|]
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upregulated in late gametocytes ULG8 [Plasmodium falciparum 3D7]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 104-162 3.56e-18

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 79.32  E-value: 3.56e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1016053513  104 CEINYSKLCPEDWIDMGDGIsCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPC 162
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDGI-CIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 165-226 1.38e-17

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


:

Pssm-ID: 130556  Cd Length: 62  Bit Score: 77.83  E-value: 1.38e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513  165 ICIEDFSKKCPENWIHNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSCYD 226
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 230-284 2.62e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.62e-14
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  230 NFNILCPLNWkNNPDNKTCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:pfam09717    4 DYSAPCPLGW-YKGDDGICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWP 57
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 808-870 2.67e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.67e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1016053513  808 CERDYVRVnCPLGWTNIGDGKCKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPC 870
Cdd:pfam09717    1 CERDYSAP-CPLGWYKGDDGICIAPSSY----KGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 959-1020 2.89e-13

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


:

Pssm-ID: 130556  Cd Length: 62  Bit Score: 65.50  E-value: 2.89e-13
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  959 KCEENFYQTCPYNWIFKDNK--CIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCKD 1020
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKygCIAPDNYKGP--CERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 380-433 2.17e-11

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 60.06  E-value: 2.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  380 QNDHSFCPYNWILINEeeHICVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDV 433
Cdd:pfam09717    3 RDYSAPCPLGWYKGDD--GICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNV 54
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 1172-1210 1.72e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.67  E-value: 1.72e-09
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1016053513 1172 ICSPPVSYKGPCNQPYDLTNFTFLQKQDFSFRCNVQWSC 1210
Cdd:pfam09717   20 ICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 290-372 2.28e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.28  E-value: 2.28e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  290 EINFNSLCPMGWNivDIKNHICQIPLSYNGPCKHdiqnkenmnsmkymkninylnninnVVSFKNFSKKQKYDYSQICNV 369
Cdd:pfam09717    2 ERDYSAPCPLGWY--KGDDGICIAPSSYKGPCKE-------------------------KLDFSNMSEEEKKAFSKKCNV 54


                   ...
gi 1016053513  370 QWP 372
Cdd:pfam09717   55 FWP 57
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 731-807 1.42e-05

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


:

Pssm-ID: 198167  Cd Length: 60  Bit Score: 43.88  E-value: 1.42e-05
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1016053513   731 KNYNV-CPIGWTYINNKKCLAPKSYISKylrtCNSILNlndivktvydvthdfsFVTIDKKKGEKLEKNCNLNFPCLE 807
Cdd:smart01099    3 RNYSSpCPLGWIRKNDGYCIAPDSYKGP----CNNIIN----------------FKNLDKKEKESWSKKCNVSWPCKN 60
PDDEXK_nuclease-like super family cl40440
PDDEXK family nucleases; Superfamily of PDDEXK nucleases including very short patch repair ...
 560-729 3.24e-05

PDDEXK family nucleases; Superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI.


The actual alignment was detected with superfamily member cd22316:

Pssm-ID: 477358  Cd Length: 345  Bit Score: 47.68  E-value: 3.24e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  560 KEEIDEIIKQFKqGESPTYTKKKNYLENKTNPFITTEKNHHIENRKSKNKVNRNNFAFIQIGEPNKNNtyHDTLKRKEKK 639
Cdd:cd22316     40 KVEVEEILSNVE-RKPIFFDSDDDYLEYLFNPALPPLDNDDKANLVLELLRIRLKERGILIKISSKPL--LTPADLNIIR 116

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  640 KYIhmnNNKpIKKEQNILYIKKKQNIYKNKH--MNNITKlydnvrKEHKNKVPIVYNNTD----------NINEIKNLYE 707
Cdd:cd22316    117 KEL---ENK-LKKLREKKYAKRQAEDWEEILeyFDLIEN------REIKKFIPEAEAPAYfewntwraflAIDLAGKIYE 186

                          170       180       190
                   ....*....|....*....|....*....|...
gi 1016053513  708 NYKIEKENNPYH-----------IYDKFNLICE 729
Cdd:cd22316    187 NFRFDDDGLPLStapgngpdiifEYEDFVLVVE 219
CPW_WPC super family cl09918
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 874-957 5.28e-03

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


The actual alignment was detected with superfamily member pfam09717:

Pssm-ID: 471949  Cd Length: 59  Bit Score: 36.56  E-value: 5.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  874 CEKDYGKVCPIGYKIINERteknnehifICTNENwkDYKNSNNYLVNTNNYeqnrnlchvieiynSILLKKEIEKKCNVT 953
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDG---------ICIAPS--SYKGPCKEKLDFSNM--------------SEEEKKAFSKKCNVF 55


                   ....
gi 1016053513  954 WPCI 957
Cdd:pfam09717   56 WPCK 59
 
Name Accession Description Interval E-value
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 104-162 3.56e-18

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 79.32  E-value: 3.56e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1016053513  104 CEINYSKLCPEDWIDMGDGIsCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPC 162
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDGI-CIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 165-226 1.38e-17

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 77.83  E-value: 1.38e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513  165 ICIEDFSKKCPENWIHNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSCYD 226
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 103-164 2.63e-17

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 77.06  E-value: 2.63e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513  103 MCEINYSKLCPEDWIDMGDGISCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPCSK 164
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 166-224 1.58e-16

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 74.70  E-value: 1.58e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1016053513  166 CIEDFSKKCPENWIhNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSC 224
Cdd:pfam09717    1 CERDYSAPCPLGWY-KGDDGICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 104-164 1.61e-14

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 68.92  E-value: 1.61e-14
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513   104 CEINYSKLCPEDWIDMGDGIsCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPCSK 164
Cdd:smart01099    1 CERNYSSPCPLGWIRKNDGY-CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 230-284 2.62e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.62e-14
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  230 NFNILCPLNWkNNPDNKTCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:pfam09717    4 DYSAPCPLGW-YKGDDGICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWP 57
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 808-870 2.67e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.67e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1016053513  808 CERDYVRVnCPLGWTNIGDGKCKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPC 870
Cdd:pfam09717    1 CERDYSAP-CPLGWYKGDDGICIAPSSY----KGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 166-226 7.98e-14

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 66.99  E-value: 7.98e-14
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513   166 CIEDFSKKCPENWIhNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSCYD 226
Cdd:smart01099    1 CERNYSSPCPLGWI-RKNDGYCIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 959-1020 2.89e-13

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 65.50  E-value: 2.89e-13
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  959 KCEENFYQTCPYNWIFKDNK--CIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCKD 1020
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKygCIAPDNYKGP--CERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 808-872 5.01e-12

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 61.98  E-value: 5.01e-12
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513   808 CERDYvRVNCPLGWTNIGDGKCKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPCFS 872
Cdd:smart01099    1 CERNY-SSPCPLGWIRKNDGYCIAPDSY----KGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 960-1019 1.12e-11

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 60.83  E-value: 1.12e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513  960 CEENFYQTCPYNWIFKDNK-CIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCK 1019
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDGiCIAPSSYKGP--CKEKLDFSNMSEEEKKAFSKKCNVFWPCK 59
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 380-433 2.17e-11

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 60.06  E-value: 2.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  380 QNDHSFCPYNWILINEeeHICVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDV 433
Cdd:pfam09717    3 RDYSAPCPLGWYKGDD--GICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNV 54
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 960-1020 4.14e-11

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 59.29  E-value: 4.14e-11
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513   960 CEENFYQTCPYNWIF-KDNKCIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCKD 1020
Cdd:smart01099    1 CERNYSSPCPLGWIRkNDGYCIAPDSYKGP--CNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 230-284 1.01e-09

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 55.48  E-value: 1.01e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  230 NFNILCPLNWKNNPDNKTCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:TIGR01492    5 NYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWP 59
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 1172-1210 1.72e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.67  E-value: 1.72e-09
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1016053513 1172 ICSPPVSYKGPCNQPYDLTNFTFLQKQDFSFRCNVQWSC 1210
Cdd:pfam09717   20 ICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 290-372 2.28e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.28  E-value: 2.28e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  290 EINFNSLCPMGWNivDIKNHICQIPLSYNGPCKHdiqnkenmnsmkymkninylnninnVVSFKNFSKKQKYDYSQICNV 369
Cdd:pfam09717    2 ERDYSAPCPLGWY--KGDDGICIAPSSYKGPCKE-------------------------KLDFSNMSEEEKKAFSKKCNV 54


                   ...
gi 1016053513  370 QWP 372
Cdd:pfam09717   55 FWP 57
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 230-284 1.55e-08

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 51.97  E-value: 1.55e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513   230 NFNILCPLNWKNNPDNKtCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:smart01099    4 NYSSPCPLGWIRKNDGY-CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWP 57
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 380-435 8.71e-08

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 50.04  E-value: 8.71e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1016053513   380 QNDHSFCPYNWILINEEEhiCVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDVIF 435
Cdd:smart01099    3 RNYSSPCPLGWIRKNDGY--CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSW 56
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 379-433 1.76e-07

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 49.32  E-value: 1.76e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  379 IQNDHSFCPYNWILINEEeHICVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDV 433
Cdd:TIGR01492    3 EENYSSPCPENWIQKNDK-YGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNV 56
PTZ00444 PTZ00444
hypothetical protein; Provisional
 105-161 7.66e-07

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 50.96  E-value: 7.66e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1016053513  105 EINYSKLCPEDWIDMGDGiSCLSpLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWP 161
Cdd:PTZ00444    98 ERDYSYPCPEGWTKNSNG-QCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFWP 152
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 1173-1212 2.39e-06

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 45.81  E-value: 2.39e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|
gi 1016053513  1173 CSPPVSYKGPCNQPYDLTNFTFLQKQDFSFRCNVQWSCGS 1212
Cdd:smart01099   21 CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 290-375 1.00e-05

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 44.26  E-value: 1.00e-05
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513   290 EINFNSLCPMGWniVDIKNHICQIPLSYNGPCKHDIqnkenmnsmkymkninylnninnvvSFKNFSKKQKYDYSQICNV 369
Cdd:smart01099    2 ERNYSSPCPLGW--IRKNDGYCIAPDSYKGPCNNII-------------------------NFKNLDKKEKESWSKKCNV 54


                    ....*.
gi 1016053513   370 QWPLEN 375
Cdd:smart01099   55 SWPCKN 60
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 731-807 1.42e-05

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 43.88  E-value: 1.42e-05
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1016053513   731 KNYNV-CPIGWTYINNKKCLAPKSYISKylrtCNSILNlndivktvydvthdfsFVTIDKKKGEKLEKNCNLNFPCLE 807
Cdd:smart01099    3 RNYSSpCPLGWIRKNDGYCIAPDSYKGP----CNNIIN----------------FKNLDKKEKESWSKKCNVSWPCKN 60
BspD6I-like cd22316
nicking endonuclease Nt.BspD6I and similar endonucleases; Heterodimeric type II restriction ...
 560-729 3.24e-05

nicking endonuclease Nt.BspD6I and similar endonucleases; Heterodimeric type II restriction endonuclease nicking endonuclease BspD6I recognizes a pseudosymmetric DNA sequence (5'-GAGTC) and cuts both strands outside the recognition motif 4 nucleotides downstream. It forms the large subunit in a heterodimeric arrangement. This catalytic domain/subunit belongs to a superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI.


Pssm-ID: 411720  Cd Length: 345  Bit Score: 47.68  E-value: 3.24e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  560 KEEIDEIIKQFKqGESPTYTKKKNYLENKTNPFITTEKNHHIENRKSKNKVNRNNFAFIQIGEPNKNNtyHDTLKRKEKK 639
Cdd:cd22316     40 KVEVEEILSNVE-RKPIFFDSDDDYLEYLFNPALPPLDNDDKANLVLELLRIRLKERGILIKISSKPL--LTPADLNIIR 116

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  640 KYIhmnNNKpIKKEQNILYIKKKQNIYKNKH--MNNITKlydnvrKEHKNKVPIVYNNTD----------NINEIKNLYE 707
Cdd:cd22316    117 KEL---ENK-LKKLREKKYAKRQAEDWEEILeyFDLIEN------REIKKFIPEAEAPAYfewntwraflAIDLAGKIYE 186

                          170       180       190
                   ....*....|....*....|....*....|...
gi 1016053513  708 NYKIEKENNPYH-----------IYDKFNLICE 729
Cdd:cd22316    187 NFRFDDDGLPLStapgngpdiifEYEDFVLVVE 219
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 728-806 6.56e-05

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 41.96  E-value: 6.56e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  728 CEnKNYN-VCPIGWTYINNKKCLAPKSYISKylrtCNSILnlndivktvydvthDFSFVTIDKKKgeKLEKNCNLNFPCL 806
Cdd:pfam09717    1 CE-RDYSaPCPLGWYKGDDGICIAPSSYKGP----CKEKL--------------DFSNMSEEEKK--AFSKKCNVFWPCK 59
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 290-375 2.67e-04

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 40.08  E-value: 2.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  290 EINFNSLCPMGWnIVDIKNHICQIPLSYNGPCKHdiqnkenmnsmkymkninylnninnVVSFKNFSKKQKYDYSQICNV 369
Cdd:TIGR01492    3 EENYSSPCPENW-IQKNDKYGCIAPDNYKGPCER-------------------------KKIFDNMNKKEKEDYSKKCNV 56


                   ....*.
gi 1016053513  370 QWPLEN 375
Cdd:TIGR01492   57 KWPCKN 62
PTZ00444 PTZ00444
hypothetical protein; Provisional
 169-222 4.32e-03

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 39.79  E-value: 4.32e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  169 DFSKKCPENWIHNiENNTCEApKNYAGKCIRQKNFDHYSQSEKKVWAQICDINW 222
Cdd:PTZ00444   100 DYSYPCPEGWTKN-SNGQCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFW 151
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 874-957 5.28e-03

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 36.56  E-value: 5.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  874 CEKDYGKVCPIGYKIINERteknnehifICTNENwkDYKNSNNYLVNTNNYeqnrnlchvieiynSILLKKEIEKKCNVT 953
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDG---------ICIAPS--SYKGPCKEKLDFSNM--------------SEEEKKAFSKKCNVF 55


                   ....
gi 1016053513  954 WPCI 957
Cdd:pfam09717   56 WPCK 59
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 807-870 5.52e-03

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 36.61  E-value: 5.52e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  807 ECERDYvRVNCPLGWTNIGDGK-CKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPC 870
Cdd:TIGR01492    1 KCEENY-SSPCPENWIQKNDKYgCIAPDNY----KGPCERKKIFDNMNKKEKEDYSKKCNVKWPC 60
PTZ00444 PTZ00444
hypothetical protein; Provisional
 223-284 7.68e-03

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 39.02  E-value: 7.68e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  223 SCYDKNY--NFNILCPLNWKNNpDNKTCSApISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:PTZ00444    91 SCGEPSYerDYSYPCPEGWTKN-SNGQCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFWP 152
 
Name Accession Description Interval E-value
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 104-162 3.56e-18

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 79.32  E-value: 3.56e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1016053513  104 CEINYSKLCPEDWIDMGDGIsCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPC 162
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDGI-CIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 165-226 1.38e-17

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 77.83  E-value: 1.38e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513  165 ICIEDFSKKCPENWIHNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSCYD 226
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 103-164 2.63e-17

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 77.06  E-value: 2.63e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513  103 MCEINYSKLCPEDWIDMGDGISCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPCSK 164
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 166-224 1.58e-16

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 74.70  E-value: 1.58e-16
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1016053513  166 CIEDFSKKCPENWIhNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSC 224
Cdd:pfam09717    1 CERDYSAPCPLGWY-KGDDGICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 104-164 1.61e-14

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 68.92  E-value: 1.61e-14
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513   104 CEINYSKLCPEDWIDMGDGIsCLSPLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWPCSK 164
Cdd:smart01099    1 CERNYSSPCPLGWIRKNDGY-CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 230-284 2.62e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.62e-14
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  230 NFNILCPLNWkNNPDNKTCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:pfam09717    4 DYSAPCPLGW-YKGDDGICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWP 57
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 808-870 2.67e-14

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 68.54  E-value: 2.67e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1016053513  808 CERDYVRVnCPLGWTNIGDGKCKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPC 870
Cdd:pfam09717    1 CERDYSAP-CPLGWYKGDDGICIAPSSY----KGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 166-226 7.98e-14

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 66.99  E-value: 7.98e-14
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513   166 CIEDFSKKCPENWIhNIENNTCEAPKNYAGKCIRQKNFDHYSQSEKKVWAQICDINWSCYD 226
Cdd:smart01099    1 CERNYSSPCPLGWI-RKNDGYCIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 959-1020 2.89e-13

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 65.50  E-value: 2.89e-13
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  959 KCEENFYQTCPYNWIFKDNK--CIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCKD 1020
Cdd:TIGR01492    1 KCEENYSSPCPENWIQKNDKygCIAPDNYKGP--CERKKIFDNMNKKEKEDYSKKCNVKWPCKN 62
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 808-872 5.01e-12

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 61.98  E-value: 5.01e-12
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513   808 CERDYvRVNCPLGWTNIGDGKCKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPCFS 872
Cdd:smart01099    1 CERNY-SSPCPLGWIRKNDGYCIAPDSY----KGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 960-1019 1.12e-11

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 60.83  E-value: 1.12e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1016053513  960 CEENFYQTCPYNWIFKDNK-CIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCK 1019
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDGiCIAPSSYKGP--CKEKLDFSNMSEEEKKAFSKKCNVFWPCK 59
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 380-433 2.17e-11

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 60.06  E-value: 2.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  380 QNDHSFCPYNWILINEeeHICVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDV 433
Cdd:pfam09717    3 RDYSAPCPLGWYKGDD--GICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNV 54
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 960-1020 4.14e-11

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 59.29  E-value: 4.14e-11
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1016053513   960 CEENFYQTCPYNWIF-KDNKCIAPYYYVPPkgCSHSFDILSFRNFDKFLYSNKCFAPWPCKD 1020
Cdd:smart01099    1 CERNYSSPCPLGWIRkNDGYCIAPDSYKGP--CNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 230-284 1.01e-09

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 55.48  E-value: 1.01e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  230 NFNILCPLNWKNNPDNKTCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:TIGR01492    5 NYSSPCPENWIQKNDKYGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNVKWP 59
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 1172-1210 1.72e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.67  E-value: 1.72e-09
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1016053513 1172 ICSPPVSYKGPCNQPYDLTNFTFLQKQDFSFRCNVQWSC 1210
Cdd:pfam09717   20 ICIAPSSYKGPCKEKLDFSNMSEEEKKAFSKKCNVFWPC 58
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 290-372 2.28e-09

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 54.28  E-value: 2.28e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  290 EINFNSLCPMGWNivDIKNHICQIPLSYNGPCKHdiqnkenmnsmkymkninylnninnVVSFKNFSKKQKYDYSQICNV 369
Cdd:pfam09717    2 ERDYSAPCPLGWY--KGDDGICIAPSSYKGPCKE-------------------------KLDFSNMSEEEKKAFSKKCNV 54


                   ...
gi 1016053513  370 QWP 372
Cdd:pfam09717   55 FWP 57
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 230-284 1.55e-08

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 51.97  E-value: 1.55e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513   230 NFNILCPLNWKNNPDNKtCSAPISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:smart01099    4 NYSSPCPLGWIRKNDGY-CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWP 57
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 380-435 8.71e-08

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 50.04  E-value: 8.71e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 1016053513   380 QNDHSFCPYNWILINEEEhiCVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDVIF 435
Cdd:smart01099    3 RNYSSPCPLGWIRKNDGY--CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSW 56
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 379-433 1.76e-07

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 49.32  E-value: 1.76e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  379 IQNDHSFCPYNWILINEEeHICVAPIEYEGPCENIFSFKNYTAHMKFAWASSCDV 433
Cdd:TIGR01492    3 EENYSSPCPENWIQKNDK-YGCIAPDNYKGPCERKKIFDNMNKKEKEDYSKKCNV 56
PTZ00444 PTZ00444
hypothetical protein; Provisional
 105-161 7.66e-07

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 50.96  E-value: 7.66e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1016053513  105 EINYSKLCPEDWIDMGDGiSCLSpLHYKGPCEKKVIFKNASAKSKYNFSINCNVSWP 161
Cdd:PTZ00444    98 ERDYSYPCPEGWTKNSNG-QCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFWP 152
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 1173-1212 2.39e-06

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 45.81  E-value: 2.39e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|
gi 1016053513  1173 CSPPVSYKGPCNQPYDLTNFTFLQKQDFSFRCNVQWSCGS 1212
Cdd:smart01099   21 CIAPDSYKGPCNNIINFKNLDKKEKESWSKKCNVSWPCKN 60
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 290-375 1.00e-05

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 44.26  E-value: 1.00e-05
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513   290 EINFNSLCPMGWniVDIKNHICQIPLSYNGPCKHDIqnkenmnsmkymkninylnninnvvSFKNFSKKQKYDYSQICNV 369
Cdd:smart01099    2 ERNYSSPCPLGW--IRKNDGYCIAPDSYKGPCNNII-------------------------NFKNLDKKEKESWSKKCNV 54


                    ....*.
gi 1016053513   370 QWPLEN 375
Cdd:smart01099   55 SWPCKN 60
CPW_WPC smart01099
This group of sequences is defined by a domain of about 61 residues in length with six ...
 731-807 1.42e-05

This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites; The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 198167  Cd Length: 60  Bit Score: 43.88  E-value: 1.42e-05
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1016053513   731 KNYNV-CPIGWTYINNKKCLAPKSYISKylrtCNSILNlndivktvydvthdfsFVTIDKKKGEKLEKNCNLNFPCLE 807
Cdd:smart01099    3 RNYSSpCPLGWIRKNDGYCIAPDSYKGP----CNNIIN----------------FKNLDKKEKESWSKKCNVSWPCKN 60
BspD6I-like cd22316
nicking endonuclease Nt.BspD6I and similar endonucleases; Heterodimeric type II restriction ...
 560-729 3.24e-05

nicking endonuclease Nt.BspD6I and similar endonucleases; Heterodimeric type II restriction endonuclease nicking endonuclease BspD6I recognizes a pseudosymmetric DNA sequence (5'-GAGTC) and cuts both strands outside the recognition motif 4 nucleotides downstream. It forms the large subunit in a heterodimeric arrangement. This catalytic domain/subunit belongs to a superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI.


Pssm-ID: 411720  Cd Length: 345  Bit Score: 47.68  E-value: 3.24e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  560 KEEIDEIIKQFKqGESPTYTKKKNYLENKTNPFITTEKNHHIENRKSKNKVNRNNFAFIQIGEPNKNNtyHDTLKRKEKK 639
Cdd:cd22316     40 KVEVEEILSNVE-RKPIFFDSDDDYLEYLFNPALPPLDNDDKANLVLELLRIRLKERGILIKISSKPL--LTPADLNIIR 116

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  640 KYIhmnNNKpIKKEQNILYIKKKQNIYKNKH--MNNITKlydnvrKEHKNKVPIVYNNTD----------NINEIKNLYE 707
Cdd:cd22316    117 KEL---ENK-LKKLREKKYAKRQAEDWEEILeyFDLIEN------REIKKFIPEAEAPAYfewntwraflAIDLAGKIYE 186

                          170       180       190
                   ....*....|....*....|....*....|...
gi 1016053513  708 NYKIEKENNPYH-----------IYDKFNLICE 729
Cdd:cd22316    187 NFRFDDDGLPLStapgngpdiifEYEDFVLVVE 219
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 728-806 6.56e-05

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 41.96  E-value: 6.56e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  728 CEnKNYN-VCPIGWTYINNKKCLAPKSYISKylrtCNSILnlndivktvydvthDFSFVTIDKKKgeKLEKNCNLNFPCL 806
Cdd:pfam09717    1 CE-RDYSaPCPLGWYKGDDGICIAPSSYKGP----CKEKL--------------DFSNMSEEEKK--AFSKKCNVFWPCK 59
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 290-375 2.67e-04

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 40.08  E-value: 2.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  290 EINFNSLCPMGWnIVDIKNHICQIPLSYNGPCKHdiqnkenmnsmkymkninylnninnVVSFKNFSKKQKYDYSQICNV 369
Cdd:TIGR01492    3 EENYSSPCPENW-IQKNDKYGCIAPDNYKGPCER-------------------------KKIFDNMNKKEKEDYSKKCNV 56


                   ....*.
gi 1016053513  370 QWPLEN 375
Cdd:TIGR01492   57 KWPCKN 62
PTZ00444 PTZ00444
hypothetical protein; Provisional
 169-222 4.32e-03

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 39.79  E-value: 4.32e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  169 DFSKKCPENWIHNiENNTCEApKNYAGKCIRQKNFDHYSQSEKKVWAQICDINW 222
Cdd:PTZ00444   100 DYSYPCPEGWTKN-SNGQCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFW 151
CPW_WPC pfam09717
Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined ...
 874-957 5.28e-03

Plasmodium falciparum domain of unknown function (CPW_WPC); This group of sequences is defined by a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC. Its function is unknown.


Pssm-ID: 462852  Cd Length: 59  Bit Score: 36.56  E-value: 5.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016053513  874 CEKDYGKVCPIGYKIINERteknnehifICTNENwkDYKNSNNYLVNTNNYeqnrnlchvieiynSILLKKEIEKKCNVT 953
Cdd:pfam09717    1 CERDYSAPCPLGWYKGDDG---------ICIAPS--SYKGPCKEKLDFSNM--------------SEEEKKAFSKKCNVF 55


                   ....
gi 1016053513  954 WPCI 957
Cdd:pfam09717   56 WPCK 59
CPW_WPC TIGR01492
Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in ...
 807-870 5.52e-03

Plasmodium falciparum CPW-WPC domain; This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.


Pssm-ID: 130556  Cd Length: 62  Bit Score: 36.61  E-value: 5.52e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1016053513  807 ECERDYvRVNCPLGWTNIGDGK-CKCPSDYplylKNLCGIIVNFKYSSPLFKKNWSYLCKSDWPC 870
Cdd:TIGR01492    1 KCEENY-SSPCPENWIQKNDKYgCIAPDNY----KGPCERKKIFDNMNKKEKEDYSKKCNVKWPC 60
PTZ00444 PTZ00444
hypothetical protein; Provisional
 223-284 7.68e-03

hypothetical protein; Provisional


Pssm-ID: 185623  Cd Length: 184  Bit Score: 39.02  E-value: 7.68e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1016053513  223 SCYDKNY--NFNILCPLNWKNNpDNKTCSApISYMGPCSNILYLYNFSDKEKITISHICNVEWP 284
Cdd:PTZ00444    91 SCGEPSYerDYSYPCPEGWTKN-SNGQCWG-MDYKGPCEALQYFKWFSEEEKREFENNCCAFWP 152
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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