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Conserved domains on  [gi|1002273853|ref|XP_015641244|]
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rhamnogalacturonan I rhamnosyltransferase 1 [Oryza sativa Japonica Group]

Protein Classification

O-fucosyltransferase family protein( domain architecture ID 10181944)

O-fucosyltransferase family protein may be involved in glycan metabolism by O-fucosylation of protein substrates; similar to O-fucosyltransferases which are involved in glycan metabolism

EC:  2.4.1.-
Gene Ontology:  GO:0016757|GO:0046922|GO:0036066

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
O-FucT_plant cd11299
GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this ...
110-435 4.51e-164

GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


:

Pssm-ID: 211385  Cd Length: 290  Bit Score: 465.89  E-value: 4.51e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 110 YLMVSCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVE 189
Cdd:cd11299     1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLPEELASKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 190 HgmYHSMPPISWSDISYYHNQILPLIRKYKVLHLNRTDARLANNGLPMEIQKLRCRVNYASLRFTSQIEELGKRVIRILR 269
Cdd:cd11299    81 E--ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 270 Q-NGPFLVLHLRYEMDMLAFSGCtqgcsneeaddltrmryaypwwkekiinselkrkdGLCPLTPEETALVLRALDIDRS 348
Cdd:cd11299   159 EaGGPFLALHLRFEKDMLAFSGC-----------------------------------GKCPLTPEEVGLLLRALGFPRS 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 349 MQIYIAAGEIYGGKRRMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRR 428
Cdd:cd11299   204 TRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRR 283

                  ....*..
gi 1002273853 429 YMGFKKT 435
Cdd:cd11299   284 YLGHRKT 290
 
Name Accession Description Interval E-value
O-FucT_plant cd11299
GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this ...
110-435 4.51e-164

GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211385  Cd Length: 290  Bit Score: 465.89  E-value: 4.51e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 110 YLMVSCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVE 189
Cdd:cd11299     1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLPEELASKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 190 HgmYHSMPPISWSDISYYHNQILPLIRKYKVLHLNRTDARLANNGLPMEIQKLRCRVNYASLRFTSQIEELGKRVIRILR 269
Cdd:cd11299    81 E--ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 270 Q-NGPFLVLHLRYEMDMLAFSGCtqgcsneeaddltrmryaypwwkekiinselkrkdGLCPLTPEETALVLRALDIDRS 348
Cdd:cd11299   159 EaGGPFLALHLRFEKDMLAFSGC-----------------------------------GKCPLTPEEVGLLLRALGFPRS 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 349 MQIYIAAGEIYGGKRRMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRR 428
Cdd:cd11299   204 TRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRR 283

                  ....*..
gi 1002273853 429 YMGFKKT 435
Cdd:cd11299   284 YLGHRKT 290
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
110-430 2.73e-85

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 263.39  E-value: 2.73e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 110 YLMV-SCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPS----EFQDIFDVehFITSLRdevrilrelpprv 184
Cdd:pfam10250   1 YLLYcPCNGGFNQQRDHICDAVAFARLLNATLVLPPWDQLYHWRDPStdqiPFSDIFDE--FIESLC------------- 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 185 krRVEHGmyhsmppiswsdisyyhnqilplirkykvlhlnrtdarlanNGLPMEiqklrcrVNYASLRFTSQIEELGKRV 264
Cdd:pfam10250  66 --RSKQG-----------------------------------------NFGPFW-------VNFHALRFSPEIEELGDKL 95
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 265 IRILRqNGPFLVLHLRYEMDMLAFSGCTQGCSNEEADdltrmryaypwwkekiINSELKRKDGLCPLTPEE-----TALV 339
Cdd:pfam10250  96 VDRLL-KGPYLALHLRREKDMLAASGCAEGGGDEEAE----------------EDPEERRRNGLCPLTPEEclpslVGIL 158
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 340 LRALDIDRSM-QIYIAAGEIYGGKRrMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQmaALDYLVSLESDIFVPTYDGN 418
Cdd:pfam10250 159 LQALGFVKKLtRIYVATDEIYGGEE-LAPLKSMFPNLVTKESLASVEELEPFKDGSSA--ALDYIICLHSDVFIGTCVSN 235
                         330
                  ....*....|..
gi 1002273853 419 MAKVVEGHRRYM 430
Cdd:pfam10250 236 FSAFVKGERRYL 247
 
Name Accession Description Interval E-value
O-FucT_plant cd11299
GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this ...
110-435 4.51e-164

GDP-fucose protein O-fucosyltransferase, plant specific subfamily; Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211385  Cd Length: 290  Bit Score: 465.89  E-value: 4.51e-164
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 110 YLMVSCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVE 189
Cdd:cd11299     1 YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLPEELASKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 190 HgmYHSMPPISWSDISYYHNQILPLIRKYKVLHLNRTDARLANNGLPMEIQKLRCRVNYASLRFTSQIEELGKRVIRILR 269
Cdd:cd11299    81 E--ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 270 Q-NGPFLVLHLRYEMDMLAFSGCtqgcsneeaddltrmryaypwwkekiinselkrkdGLCPLTPEETALVLRALDIDRS 348
Cdd:cd11299   159 EaGGPFLALHLRFEKDMLAFSGC-----------------------------------GKCPLTPEEVGLLLRALGFPRS 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 349 MQIYIAAGEIYGGKRRMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRR 428
Cdd:cd11299   204 TRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRR 283

                  ....*..
gi 1002273853 429 YMGFKKT 435
Cdd:cd11299   284 YLGHRKT 290
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
110-430 2.73e-85

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 263.39  E-value: 2.73e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 110 YLMV-SCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPS----EFQDIFDVehFITSLRdevrilrelpprv 184
Cdd:pfam10250   1 YLLYcPCNGGFNQQRDHICDAVAFARLLNATLVLPPWDQLYHWRDPStdqiPFSDIFDE--FIESLC------------- 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 185 krRVEHGmyhsmppiswsdisyyhnqilplirkykvlhlnrtdarlanNGLPMEiqklrcrVNYASLRFTSQIEELGKRV 264
Cdd:pfam10250  66 --RSKQG-----------------------------------------NFGPFW-------VNFHALRFSPEIEELGDKL 95
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 265 IRILRqNGPFLVLHLRYEMDMLAFSGCTQGCSNEEADdltrmryaypwwkekiINSELKRKDGLCPLTPEE-----TALV 339
Cdd:pfam10250  96 VDRLL-KGPYLALHLRREKDMLAASGCAEGGGDEEAE----------------EDPEERRRNGLCPLTPEEclpslVGIL 158
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 340 LRALDIDRSM-QIYIAAGEIYGGKRrMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQmaALDYLVSLESDIFVPTYDGN 418
Cdd:pfam10250 159 LQALGFVKKLtRIYVATDEIYGGEE-LAPLKSMFPNLVTKESLASVEELEPFKDGSSA--ALDYIICLHSDVFIGTCVSN 235
                         330
                  ....*....|..
gi 1002273853 419 MAKVVEGHRRYM 430
Cdd:pfam10250 236 FSAFVKGERRYL 247
O-FucT_like cd11296
GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like ...
251-432 7.25e-09

GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211383  Cd Length: 206  Bit Score: 55.89  E-value: 7.25e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 251 LRFTSQIEELGKRVIRILRQ--NGPFLVLHLRYEmdmlAFSGCTQGCSNEEADDLTRMRYAypwwkEKIINSELKRKDGL 328
Cdd:cd11296    49 LRFSPEIRKLADRFVRKLLGlpGGPYLAVHLRRG----DFEVECCHLAKWMGEYLEECLLS-----AEEIAEKIKELMAE 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002273853 329 CPLTPeetalvlraldidrsmqIYIAAGEIYGGKRRmSALTSAYPNVVRKETLLEPSDLMFFQNHSS-QMAALDYLVSLE 407
Cdd:cd11296   120 RKLKV-----------------VYVATDEADREELR-EELRKAGIRVVTKDDLLEDAELLELEKLDNyLLSLVDQEICSR 181
                         170       180
                  ....*....|....*....|....*
gi 1002273853 408 SDIFVPTYDGNMAKVVEGHRRYMGF 432
Cdd:cd11296   182 ADVFIGTGFSTFSSNVALLRRWRGK 206
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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