|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
3-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 1025.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 3 LPLTLNTFMLLALATISTPIIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISL 82
Cdd:MTH00004 1 MTLLLNTTTLLTLLILLTPILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 83 KMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHG 162
Cdd:MTH00004 81 KLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 163 RAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 242
Cdd:MTH00004 161 RAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 243 PVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL 322
Cdd:MTH00004 241 PVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 323 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLST 402
Cdd:MTH00004 321 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 403 SYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPTT 482
Cdd:MTH00004 401 SYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 483 MPLSIKMTALTVTALGAALALEISKMAQTLILTKQTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYKAL 562
Cdd:MTH00004 481 MPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKM 560
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1002166061 563 GPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILMSL 604
Cdd:MTH00004 561 GPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
4-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 862.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 4 PLTLNTFMLLALATISTPIIFPLLSNRLKNTPAT--ITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPIS 81
Cdd:MTH00137 4 TLIMTSSLILIFALLIYPLLTTLSPNPQKPNWALthVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINIS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 82 LKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWH 161
Cdd:MTH00137 84 FKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWY 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 162 GRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQA--PTLPLLGLILAAAGKSAQFGLHPWLPAAME 239
Cdd:MTH00137 164 GRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDfdLTLPLLGLILAATGKSAQFGLHPWLPSAME 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 240 GPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIG 319
Cdd:MTH00137 244 GPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 320 LNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIES 399
Cdd:MTH00137 324 LNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 400 LSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIP 479
Cdd:MTH00137 404 LNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTP 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 480 PTTMPLSIKMTALTVTALGAALALEISKMAQTLI-LTKQTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSW 558
Cdd:MTH00137 484 VMTMPPLLKLAALIVTILGLLIALELASLTNKQFkPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTW 563
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1002166061 559 YKALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSI-LIILMSL 604
Cdd:MTH00137 564 LEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLLTLaLATLLLL 610
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 834.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 1 MDLPLTLNTFMLLALATIstpiIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPI 80
Cdd:MTH00066 1 MNLMLIFNSSMILSLLLL----ILPLLLPKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 81 SLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWW 160
Cdd:MTH00066 77 SFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWW 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 161 HGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEG 240
Cdd:MTH00066 157 HARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 241 PTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL 320
Cdd:MTH00066 237 PTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 321 NLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:MTH00066 317 NQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAM 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 401 STSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPP 480
Cdd:MTH00066 397 NTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQI 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 481 TTMPLSIKMTALTVTALGAALALEISKMAQTlILTKQTTFSnFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYK 560
Cdd:MTH00066 477 LTMPTFMKLAALLVTLLGLLIALDLAKITSK-TTPKTKMHS-FSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYE 554
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1002166061 561 ALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILMSL 604
Cdd:MTH00066 555 KSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
7-602 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 828.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 7 LNTFMLLALATISTPIIFPLLS-NRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKMD 85
Cdd:MTH00108 4 FTSSTLLTLLILTLPIIMTLTNpYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 86 FYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAE 165
Cdd:MTH00108 84 YFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTD 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 166 ANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQH---LHHPSqaPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 242
Cdd:MTH00108 164 ANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQifmLNPNN--SNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 243 PVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL 322
Cdd:MTH00108 242 PVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQ 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 323 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLST 402
Cdd:MTH00108 322 PHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANT 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 403 SYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPTT 482
Cdd:MTH00108 402 SYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMT 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 483 MPLSIKMTALTVTALGAALALEISKMAQTLILTKQTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYKAL 562
Cdd:MTH00108 482 MPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKI 561
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1002166061 563 GPEGLANLQVTAAKTSTTlHRGSTKAYLGSFALSILIILM 602
Cdd:MTH00108 562 LPKTISLIQMKASTTISN-QKGLIKLYFLSFLITLTLSLL 600
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
22-605 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 695.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 22 IIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWS 101
Cdd:MTH00211 15 LLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 102 ILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGD 181
Cdd:MTH00211 95 ILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 182 IGLILCMAWLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLL 261
Cdd:MTH00211 175 IGLLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 262 IRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLF 341
Cdd:MTH00211 255 IRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLF 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 342 LCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTA 421
Cdd:MTH00211 335 MCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTA 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 422 VYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPTTMPLSIKMTALTVTALGAAL 501
Cdd:MTH00211 415 AYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLL 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 502 ALEISKmaqTLILTKQTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYKALGPEGLANLQVTAAKTSTTL 581
Cdd:MTH00211 495 GLELVN---LTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSP 571
|
570 580
....*....|....*....|....
gi 1002166061 582 HRGSTKAYLGSFALSILIILMSLH 605
Cdd:MTH00211 572 QQGLIKSYLALLLLSLLLILLLFL 595
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
8-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 561.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 8 NTFMLLALATISTPIIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLT-TLWEWKFIMHFKIPISLKMDF 86
Cdd:MTH00208 28 SNLPNISTSNASLGGNNNNNSIINYNNSNFSISLLKTLAFLSLINLLIWILLGCPNINiSLSNWLSNTLFNFSLSFIFDF 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 87 YSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEA 166
Cdd:MTH00208 108 YFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 167 NTAALQAVLYNRVGDIGLILCMAWLASTLNTW---EIQHLHHPSQAPT-LPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 242
Cdd:MTH00208 188 NSSALQAVIYNRIGDIGIILFLSLSLINFNSWnlnEILSLNNSNSFLInILLFGILLAAAGKSAQFGLHPWLPAAMEGPT 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 243 PVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL 322
Cdd:MTH00208 268 PVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQ 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 323 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLST 402
Cdd:MTH00208 348 PNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLA 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 403 SYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIppTNIPPTT 482
Cdd:MTH00208 428 SISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFV--FNLPPLT 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 483 MPLSIKMTALTVTALGAALALEISKMAQTLILTkqTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYKAL 562
Cdd:MTH00208 506 LPLILKSLPLIVTIIGAAFSFSFLLSLSSNPIN--SNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENI 583
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1002166061 563 GPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILMSL 604
Cdd:MTH00208 584 GPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLS 625
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-602 |
1.53e-144 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 431.50 E-value: 1.53e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 7 LNTFMLLALATISTPIIFPLLSNRLKNTPATITNT--VKASFLISLIpmTIYIHSGMESLTTLWEWKFIMHFKIPISLKM 84
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAAlaPLAAFVLSLL--LFPAVLGGEVVVELYTWIPVGSLGLDFGFRL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 85 DFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRA 164
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 165 EANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHL------HHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAM 238
Cdd:COG1009 159 SARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAM 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 239 EGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI 318
Cdd:COG1009 239 EGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 319 GLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIE 398
Cdd:COG1009 319 GVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 399 SLSTSYLNTWALLLTLLATSF-TAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGF----LITSYI 473
Cdd:COG1009 398 AALEAGGLGPLLLAVALLGAFlTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgLLEGLL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 474 PPTNIPPTTMPLS----IKMTALTVTALGAALAL------EISKMAQTLiltkqTTFSNFSSSLGYFNPLTHRFIStnll 543
Cdd:COG1009 478 APAAVLGGELHLAhgllLNALPLLLSLLGIALGYllylkrPLPALAERL-----KPLYRLLANKWYFDELYDALFV---- 548
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 544 GGGYKIASHLTDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILM 602
Cdd:COG1009 549 KPVRALARFLWFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
22-502 |
3.77e-133 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 403.00 E-value: 3.77e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 22 IIFPLLS--------NRLKNTPATITNT--VKASFLISLIPMTIYIHSGMESLT-TLWEWKFIMHFKIPISLKMDFYSLT 90
Cdd:PRK06590 9 VLLPLIGalilglfgRRIGEKWAHLVGTglVGLSALLSLVVFFDFLLGGGRAFSqTLWTWISVGDFDVDFGLRVDGLSAT 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 91 FFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAA 170
Cdd:PRK06590 89 MLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 171 LQAVLYNRVGDIGLILCMA---WLASTLNTWEI-----QHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 242
Cdd:PRK06590 169 MKAFIVNRVGDVGLALGIFllfAEFGSLNYDEVfaaapQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPT 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 243 PVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL 322
Cdd:PRK06590 249 PVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGA 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 323 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESlst 402
Cdd:PRK06590 329 YAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA--- 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 403 SYLNTWALLLTLLATS--FTAVYTVRMTVLVQGGFVRIPPLTPmNENNPAVTSPITRLALGSITAGFLIT----SYIPPT 476
Cdd:PRK06590 406 AFANGHINLFVAGLVGafLTAFYSFRLIFLVFHGKEKEKIHHP-HESPAVMTLPLIVLAVLSVFAGALIVppflGVLPLT 484
|
490 500 510
....*....|....*....|....*....|.
gi 1002166061 477 N-----IPPTTMPLSIKMTALTVTALGAALA 502
Cdd:PRK06590 485 TelahgEAEHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
18-512 |
6.47e-122 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 373.54 E-value: 6.47e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 18 ISTPIIFPLLS--------NRLKNTPATITNT--VKASFLISLIPMTIYIHSG-MESLT-TLWEWKFIMHFKIPISLKMD 85
Cdd:TIGR01974 3 IFLIVFLPLIGfliaglfgRRIGERVSGIIGIgsVGLSAALSAFVFVDFFLNGeGEAFTqSLFPWISVGGFQVDFGLRLD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 86 FYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAE 165
Cdd:TIGR01974 83 GLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 166 ANTAALQAVLYNRVGDIGLIL---CMAWLASTLNTWEIQHLHHPSQAPTLPLLGLIL--AAAGKSAQFGLHPWLPAAMEG 240
Cdd:TIGR01974 163 ANNAAIKAFVVNRVGDFGLLLgifLIFWYFGTLNFQEVFALAPGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 241 PTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL 320
Cdd:TIGR01974 243 PTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGV 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 321 NLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:TIGR01974 323 GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAA 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 401 STSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPP--TNI 478
Cdd:TIGR01974 403 FASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVL 482
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1002166061 479 PPTT--------MPLSIKMTALTVTALGAALALEISKMAQTL 512
Cdd:TIGR01974 483 PTSAepalehhhVPALEIWSPTAVAILGILLAYLLYLGNPTL 524
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
67-599 |
1.39e-116 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 359.78 E-value: 1.39e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 67 LWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGW 146
Cdd:MTH00020 61 LWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 147 EGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHH-----PSQAPTLPLLGLILAA 221
Cdd:MTH00020 141 EGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNmvvsaPSSDITLICLFLFIGA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 222 AGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKK 301
Cdd:MTH00020 221 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 302 IIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLAL 381
Cdd:MTH00020 301 VIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 382 MGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVqggFVRIPPLTPMN-----ENNPAVTSPIT 456
Cdd:MTH00020 381 MGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT---FLSNTNLKKAVffhlhEGDWNLLLPLG 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 457 RLALGSITAGFLITSYIPPTNI-PPTTMPLSIKMTALTVTALGAALALEI----SKMAQTLILTKQTTFSNFSSSLGYFN 531
Cdd:MTH00020 458 ILALGSIFVGYLAKEMIWSFQItLPPIVPLSIKLLPVFLSLGGIGLVIILyfysSKTFRVPFSFIGRNSYTFLGSAWQFN 537
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1002166061 532 PLTHRFISTNLLGGGYKIASHLTDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYlgsfALSILI 599
Cdd:MTH00020 538 YILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNY----ALVILI 601
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
45-572 |
1.99e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 351.62 E-value: 1.99e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 45 SFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLL 124
Cdd:MTH00210 39 SAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLH 204
Cdd:MTH00210 119 LFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTIS 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 205 ----HPSQAPTLPLLGLIL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLC 278
Cdd:MTH00210 199 sllvTNINKESLTIICLLLfiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 279 LCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIR 358
Cdd:MTH00210 279 TILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 359 KMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRI 438
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 439 PPLTPMN--ENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPtTMPLSIKMTALTVTALGAALA--------LEISKM 508
Cdd:MTH00210 439 KKEVFIGvhESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPP-IVPNSIKMIPLLFSLLGALLAfviynsmvFLIKIS 517
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002166061 509 AQTLILTKQTTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLTDLSWYKALGPEGLANLQV 572
Cdd:MTH00210 518 RRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLI 581
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
45-604 |
8.57e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 345.67 E-value: 8.57e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 45 SFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLL 124
Cdd:MTH00151 13 SYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGrAEANTAALQAVLYNRVGDiGLILCMAWLASTLNTWEIQHLH 204
Cdd:MTH00151 93 LFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQN-KKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSILSMW 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 205 HPSQAPTLPLLgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAI 284
Cdd:MTH00151 171 DFKLSGWLGLL-LVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 285 STLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQ 364
Cdd:MTH00151 250 TLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLF 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 365 KMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPM 444
Cdd:MTH00151 330 LSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSK 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 445 NENNPAVTSPITRLALGSITAGFLITSYIPPTNiPPTTMPLSIKMTALTVTALGAALALeiSKMAQTLILTKQTTFSNFS 524
Cdd:MTH00151 410 SDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFS-EEFFLPSYLKLLIGFVILLGLFLSF--GFWDSGFSSSKMVKLSFFF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 525 SSLGYFNPLTHRFISTNLLGGGYKIASHLtDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILMSL 604
Cdd:MTH00151 487 SSMWFLSPLSSQPLKSLSLKLSNSSMKSL-DMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
46-602 |
1.64e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 340.20 E-value: 1.64e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 46 FLISLIPMTIYIHSGMESLTTLWEWKF--IMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYL 123
Cdd:MTH00165 12 FFLSLILFFLGLYFLLNDYSLFIEWELfsLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 124 LLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLI-------SWwhgraeanTAALQAVLYNRVGDIGLILCMAWLAStLN 196
Cdd:MTH00165 92 LLFVLSMMLLIISPNLISILLGWDGLGLVSYCLViyyqnkkSY--------NAGMLTALSNRIGDVAILLSIAWMMN-FG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 197 TWEI---QHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNqT 273
Cdd:MTH00165 163 SWNFifyLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS-F 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 274 ALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNG 353
Cdd:MTH00165 242 FSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 354 EQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQG 433
Cdd:MTH00165 322 SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 434 GFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPtTMPLSIKMTALTVTALGAALALEISKMAQTLI 513
Cdd:MTH00165 402 GDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMI-CLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 514 LTKQTT--FSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLtDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLG 591
Cdd:MTH00165 481 LKSLKNykLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSF-DQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLL 559
|
570
....*....|.
gi 1002166061 592 SFALSILIILM 602
Cdd:MTH00165 560 SFLLWMIILLL 570
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
45-602 |
7.56e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 333.27 E-value: 7.56e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 45 SFLISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLL 124
Cdd:MTH00207 16 FMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGrAEANTAALQAVLYNRVGDIGLILCMAWlasTLNT--WEIQH 202
Cdd:MTH00207 96 LFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQN-PKSLGAGMITALTNRIGDVMLLLSIGW---TLNQghWSITN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 203 LHHPSQAPTLpLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLG 282
Cdd:MTH00207 172 MWQTDMNNYI-ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 283 AISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGG 362
Cdd:MTH00207 251 SLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 363 LQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLT 442
Cdd:MTH00207 331 LTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYH 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 443 PMNENNPAVTSPITRLALGSITAGFLITSYIPPTNIPPtTMPLSIKMTALTVTALGAALALEISK--MAQTLILTKQTTF 520
Cdd:MTH00207 411 HLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEP-ILPLQYKLLPLLVVTLGALLAWLFTTpnITKTPLLINNPLS 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 521 SNFSSSLGYFNPLTHRFISTNLlgggYKIASH---LTDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLG-SFALS 596
Cdd:MTH00207 490 HFASCLMWFLVPLSSQFIMSTP----MNLSHNylkLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMmSFVLL 565
|
....*.
gi 1002166061 597 ILIILM 602
Cdd:MTH00207 566 TIIIIM 571
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
53-602 |
2.08e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 321.59 E-value: 2.08e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 53 MTIYIHSGMESLTTLWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLT 132
Cdd:MTH00209 19 MFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNF 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 133 LIVANNLFVLFIGWEGVGIMSFLLISWWHGRaEANTAALQAVLYNRVGDIGLILCMAWlASTLNTWEIQHLHHPSQAPTL 212
Cdd:MTH00209 99 LIFVPNLITLLLGWDGLGLVSYLLVIYYQNS-KSLSAGMLTALTNRVGDALLILSIAW-MLMHGNWNIFYLNFNSNLGSV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 213 PLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATC 292
Cdd:MTH00209 177 ISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMS 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 293 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTS 372
Cdd:MTH00209 257 ANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 373 CFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVT 452
Cdd:MTH00209 337 CLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNL 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 453 SPITRLALGSITAGFLITSYIPPTNIPPtTMPLSIKMTALTVTALGAALALEISKmaQTLILTKQTTFSNFSSSLGYFNP 532
Cdd:MTH00209 417 KPMLVLTLGSITGGSVMSWVMVPSVNSV-VLPWFLKLLPIMLILFGVLLMYMVLK--KNFFLIKGYKVNYFLSQMWFLPD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 533 LTHRFISTNLLGGGyKIASHLTDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFALSILIILM 602
Cdd:MTH00209 494 LSSQPVNKFTMKLS-KTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVIL 562
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
11-427 |
2.43e-90 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 293.08 E-value: 2.43e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 11 MLLALATIStpiiFPLLSNRLKNTPA-TITNTVKASFLISLIPMTIYIhSGMESLTTLWEWKFIMHFKIPISLKMDFYSL 89
Cdd:PRK07376 20 VLVGLGLIS----FNQTTNRLRQPVAvLLISLVGAAAVLSYALLWSQI-QGHEPYERLFEWASAGDFHLPMGYVIDPLGA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 90 TFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTA 169
Cdd:PRK07376 95 VMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 170 ALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQ--------APTLPLLGLILAAAG---KSAQFGLHPWLPAAM 238
Cdd:PRK07376 175 AQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSelvssgavSGWLALLLCILVFLGpmaKSAQFPLHVWLPDAM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 239 EGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI 318
Cdd:PRK07376 255 EGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAM 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 319 GLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNG--------EQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGF 390
Cdd:PRK07376 335 GCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
410 420 430
....*....|....*....|....*....|....*..
gi 1002166061 391 YSKDQIIESLSTSYLNTWalLLTLLATSFTAVYTVRM 427
Cdd:PRK07376 415 WSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
67-604 |
2.10e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 274.91 E-value: 2.10e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 67 LWEWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGW 146
Cdd:MTH00032 61 LYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 147 EGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLH----------------HPSQAP 210
Cdd:MTH00032 141 EGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyyggGAYESP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 211 TLPL----LGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAIST 286
Cdd:MTH00032 221 LAPFaiigILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 287 LFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQ-LAFLHISTHAFFKAMLFLCSGSIIHNLN-GEQDIRKMGGLQ 364
Cdd:MTH00032 301 FFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLI 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 365 KMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIE------------------------------------SLSTSYLNTW 408
Cdd:MTH00032 381 HSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAF 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 409 ALLLTLLATSFTAVYTVRMTVLVqggFVrIPPLTP--------MNENNPAVTSPITRLALGSITAGFLITSyIPPTNIPP 480
Cdd:MTH00032 461 AFWLGTVAALLTAFYSIRLVYIT---FI-ISPNSPkeslisshINIVDKRVLTVLSLLCFGAIFVGYLIQD-ILIGDIEH 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 481 TTMPLSIKMTALTVTALGAALALEISKMAQTLILTKQ---------TTFSNFSSSLGYFNPLTHRFISTNLLGGGYKIAS 551
Cdd:MTH00032 536 PIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGfdpigpsflLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIY 615
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1002166061 552 HLTDLSWYKALGPEGLANLQVTAAKTSTTLHRGSTKAYLGSFaLSILIILMSL 604
Cdd:MTH00032 616 KTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVL-LSFTIIFLAL 667
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
109-397 |
1.52e-67 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 233.63 E-value: 1.52e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 109 YMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGL---I 185
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 186 LCMAW---------LASTLNTWEIQHLHHPSQApTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA 256
Cdd:CHL00025 194 LGFYWitgsfefrdLFEIFNNLIYNNEVNLLFA-TLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 257 GIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFF 336
Cdd:CHL00025 273 GIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYS 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 337 KAMLFLCSGSIIHNL--------NGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQII 397
Cdd:CHL00025 353 KALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-400 |
1.92e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 217.09 E-value: 1.92e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 43 KASFLISLIPMTIYIH--------SGMESLTTLWEWkfIMHFKIPISLKMDFYSLTFfpiALFVS---WSILQFASWYMA 111
Cdd:PRK12647 15 NAGWLLALLPLALFLYflsfipeiAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 112 SDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWL 191
Cdd:PRK12647 90 GHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 192 ASTLNTWEIQHLHHPSQAPT-----LPLLGLILAAA-GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTH 265
Cdd:PRK12647 170 GNVTGTYSLSELLASGDVIRehplyLAILLLVLGGAfTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 266 PLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFL 342
Cdd:PRK12647 250 PVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFM 329
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1002166061 343 CSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:PRK12647 330 VAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAL 386
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
78-468 |
3.30e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 201.81 E-value: 3.30e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 78 IPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLI 157
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 158 --SWWHGRAeantAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQH-LHHPSQAPTLPLLGLI-----LAAAGKSAQFG 229
Cdd:PRK12650 151 arSGSGGEA----GSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGiLHSDVWAEKPGLTTVVavliaVAAFTKSAQFP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 230 LHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSS 309
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 310 QLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPF 386
Cdd:PRK12650 307 QLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 387 LAGFYSKDQIIESLSTSYLNTWALLLTLLATSFTAVYTVRMTV-LVQGGFVRIP-PLTPMNENNPAVTSPITRLALGSIT 464
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSArLVLGAFVDGPrDMSHVKEAPVSLWLPAALPGALSLP 465
|
....
gi 1002166061 465 AGFL 468
Cdd:PRK12650 466 LGLV 469
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
136-400 |
1.58e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 187.14 E-value: 1.58e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 136 ANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQ------HLHHPSQA 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 210 PTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRTHPLF-YNNQTALTLCLCLGAISTL 287
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 288 FAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQ 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 1002166061 365 KMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-468 |
2.34e-54 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 199.38 E-value: 2.34e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 42 VKASFLISLIPMTIYIHSGmESLTTLWEWkfIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASD-PYITKFF 120
Cdd:PRK12644 33 VPAAAFVWVLAQWPAVLAG-GAPTEVVPW--IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 121 TYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEI 200
Cdd:PRK12644 110 AELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 201 QHLhhPSQAPTLPLLG----LILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTAL 275
Cdd:PRK12644 190 SEL--LADPPTGPAVSvavvLILVgALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWR 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 276 TLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHIS---THAFFKAMLFLCSGSIIHNlN 352
Cdd:PRK12644 268 PTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAmllAHALFKAALFLVVGIIDHS-T 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 353 GEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL----STSYLNTWALLLTLLATSFTAVYTVRmt 428
Cdd:PRK12644 347 GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLR-- 424
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1002166061 429 vLVQGGFVR------IPPLTPMNENNPAVTSPITRLALGSITAGFL 468
Cdd:PRK12644 425 -FLWGAFARkpgafpSVAVTEMHRPSPLFLAPPAVLAVLGLVLGLL 469
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
10-405 |
4.49e-54 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 196.99 E-value: 4.49e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 10 FMLLALATISTPIIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLttlwewKFIMHFKIPISLKMDFYSL 89
Cdd:TIGR00940 5 FILPPFAASLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTI------DWVPELGLNFTLYMDGLAL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 90 TFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTA 169
Cdd:TIGR00940 79 LFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 170 ALQAVLYNRVGDIGLILCMAWLASTLNTWEIQH-LHHPSQAPTLPLLG-----LILAAAGKSAQFGLHPWLPAAMEGPTP 243
Cdd:TIGR00940 159 AQKSLTITVFGGLAMLGGLILLGKITGSFSIDAvIASADAIRNSPLFGtamvlVLLGAFTKSAQFPFHIWLPDAMEAPTP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 244 VSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP 323
Cdd:TIGR00940 239 VSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 324 QL----------------AFLHISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFL 387
Cdd:TIGR00940 319 SYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPF 397
|
410
....*....|....*...
gi 1002166061 388 AGFYSKDQIIESLSTSYL 405
Cdd:TIGR00940 398 NGFLSKEMFFAEAITAHL 415
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-400 |
7.55e-54 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 196.51 E-value: 7.55e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 1 MDLPLTLNTFMLLALATISTPIIFPLlsNRLKNTPATITNTVKASFLISLIPMTIyiHSGMESLTTLWewkfIMHFKIPI 80
Cdd:PRK12646 1 MSLVYLLIAILVIMAMILLTSKRRAL--AKYAGYIALVAPIISSIYFLIQIPSVA--KLQYLSTSIPW----MKTLDINL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 81 SLKMDFYSLTFFPIALFVSWSILQFASWYMASD-PYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISW 159
Cdd:PRK12646 73 DLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 160 WHGRAEANTAALQAVLYNRVGDIGLI--LCMAWLASTLNTWE--IQHLHHPSQAPTLP--LLGLILAAAGKSAQFGLHPW 233
Cdd:PRK12646 153 WYNNGDSQFGAIQSFMITVFGGLALLvgFIMLYIMTGTNNITeiLGQADHIKNHGLFIpmIFMFLLGAFTKSAQFPFHIW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 234 LPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGL 313
Cdd:PRK12646 233 LPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 314 MMVTIGLN--LPQ---------------LAFLHISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTI 376
Cdd:PRK12646 313 IMAMVGIGggYAQhqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTI 391
|
410 420
....*....|....*....|....
gi 1002166061 377 GNLALMGTPFLAGFYSKDQIIESL 400
Cdd:PRK12646 392 AALSMAGVPFLNGFLSKEMFLDAL 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
21-400 |
1.46e-53 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 188.82 E-value: 1.46e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 21 PIIFPLLS-------NRLKNTPATITNTVKASFLISLIPMTIYIHSGMESLTTLWEWKFimhfKIPISLKMDFYSLTFFP 93
Cdd:COG0651 8 PVLLPLLAaalllllGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPA----PFGIVLVADRLSALFLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 94 IALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISwWHGRAEANTAALQA 173
Cdd:COG0651 84 LTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGGTKEALRAGLKY 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 174 VLYNRVGDIGLILCMAWLASTLNTWEIQHLHH--PSQAPTLPLLGLILAAAG---KSAQFGLHPWLPAAM-EGPTPVSAL 247
Cdd:COG0651 163 LILNLVGSALFLLGVGLLYGATGTLNMADLAArlAELDPGLLLAAFALLLVGfgiKAALFPLHFWLPDAYpAAPSPVSAL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 248 LhSSTMVVAGIFLLIRTHPLFYNNQTAL---TLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQ 324
Cdd:COG0651 243 L-SGLLTKVGVYAILRVLTLLFGADPALflgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPL 321
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 325 L---AFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:COG0651 322 GlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
11-393 |
9.73e-53 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 194.64 E-value: 9.73e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 11 MLLALAtISTPII---FPLLSNRL-KNTPATITNTVKASFLISLIPMTIYIHSGmESLTTLWEWkfIMHFKIPISLKMDF 86
Cdd:PRK12648 1 MSLLLL-VLLPFLgalLAALLPRNaRNAEAWLAGLVALAALVLLALLYPAVAAG-EVIRAEIEW--LPALGLNLSLRLDG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 87 YSLTF----FPIALFVswsILqFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHG 162
Cdd:PRK12648 77 LAWLFalliLGIGLLV---VL-YARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 163 RAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHL--------HHPSQaptLPLLGLILAAA-GKSAQFGLHPW 233
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVlaagdlirAHPLY---PPALVLILLGAfTKSAQFPFHFW 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 234 LPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGL 313
Cdd:PRK12648 230 LPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGL 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 314 MMVTIGLNLPQ---LAFLHISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGF 390
Cdd:PRK12648 310 ITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGF 388
|
...
gi 1002166061 391 YSK 393
Cdd:PRK12648 389 LSK 391
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
80-427 |
4.84e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 184.35 E-value: 4.84e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 80 ISLKMDFY--SLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLI 157
Cdd:MTH00095 37 LSLKFNFYfnSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 158 SWWhGRAEANTAALQAVLYNRVGDIGLILCMA-WLASTLNTWEIQHLHhpsqapTLPLLGLILAAAGKSAQFGLHPWLPA 236
Cdd:MTH00095 117 LFY-NNWDSNSGAMNTALTNRIGDFFIFLFFSgFIFSSYYFFSFSFFS------SSMILMLLLTSFTKSAQFPFSSWLPK 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 237 AMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNqTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMV 316
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 317 TIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMG--GLQKMLPTTTSCFTIgnLALMGTPFLAGFYSKD 394
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSnnGNLPMFIQLQLLVTL--FCLCGLMFTSGMVSKE 346
|
330 340 350
....*....|....*....|....*....|...
gi 1002166061 395 QIIESLSTSYLNTWALLLTLLATSFTAVYTVRM 427
Cdd:MTH00095 347 LILELFFFNNYMIFFSLMFFFSVFLTFGYSYRL 379
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
46-400 |
1.58e-48 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 181.28 E-value: 1.58e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 46 FLISLIPMTIYIHSGMESLttlwEWkfIMHFKIPISLKMDFYSLTFfpiALFVSW--SILQFASWYmasdpYITK----- 118
Cdd:PRK12645 44 YFLSLIPTTMSGNTVMKTL----PW--IPSLGINFTLYVDGLSLLF---ALLITGigSLVVLYSIY-----YLSKkkeql 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 --FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLN 196
Cdd:PRK12645 110 gnFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 197 TWEIQHL-HHPSQAPTLPL----LGLILAAA-GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYN 270
Cdd:PRK12645 190 SFSIREMiANADEIQNSPLfipaMILILLGAfTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAG 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 271 NQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL------------NLPQLAFL----HISTHA 334
Cdd:PRK12645 270 SQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddsKIYAAAITaaifHLINHA 349
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1002166061 335 FFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:PRK12645 350 TFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
102-399 |
2.36e-47 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 177.71 E-value: 2.36e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 102 ILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGD 181
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 182 IGLILCMAWLASTLNTWEIQHLHHPSQ------APTLPLLGLIL---AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSST 252
Cdd:PRK12649 176 LFMFAGFLLLHVITGTYDIATILQDSElienikGHPLFLITLILifiGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSAT 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 253 MVVAGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL---PQLAF-- 327
Cdd:PRK12649 256 MVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTyhePGLGVaa 335
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002166061 328 --LHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIES 399
Cdd:PRK12649 336 atFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
105-434 |
2.77e-46 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 172.40 E-value: 2.77e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 105 FASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGL 184
Cdd:PRK07390 108 YALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 185 ILCMAWLASTLNTWEIQHLHHPSQAPTLP-----LLGLILAA--AGKSAQFGLHPWLPAAMEGPTPVSaLLHSSTMVVAG 257
Cdd:PRK07390 188 LMGVVALSPLAGTLNFSDLAAWAATANLDpltatLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATG 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 258 IFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFK 337
Cdd:PRK07390 267 AWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAK 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 338 AMLFLCSGSIIHNLNGeQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLntWALLLTLLAT 417
Cdd:PRK07390 347 ALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSP--WLVGVLLLVN 423
|
330
....*....|....*..
gi 1002166061 418 SFTAVYTVRMTVLVQGG 434
Cdd:PRK07390 424 ALTAFNLTRVFRLVFLG 440
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
118-397 |
6.77e-45 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 166.30 E-value: 6.77e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 118 KFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWwHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNT 197
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WE---IQHLHHPSQapTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHpLFYNN--Q 272
Cdd:PRK06525 193 FAlsaLSGLHGSLK--YLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAI-QSMGPipH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 273 TALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL--PQLAF----LHISTHAFFKAMLFLCSGS 346
Cdd:PRK06525 270 VIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGA 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002166061 347 IIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQII 397
Cdd:PRK06525 350 LSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
423-602 |
9.81e-44 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 154.25 E-value: 9.81e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 423 YTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAGFLITSYIPPTNiPPTTMPLSIKMTALTVTALGAALA 502
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 503 LEISKMAQTLILTKQT-TFSNFSSSLGYFNPLTHRFISTNLLGGGYKIASHLtDLSWYKALGPEGLANLQVTAAKTSTTL 581
Cdd:pfam06455 80 LELSNLSNKQLKKSLNfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQNS 158
|
170 180
....*....|....*....|.
gi 1002166061 582 HRGSTKAYLGSFALSILIILM 602
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLL 179
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
97-348 |
3.22e-37 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 145.23 E-value: 3.22e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 97 FVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLY 176
Cdd:PRK08168 80 LLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 177 NRVGDIGLILCMAWLASTLNTWEIQHLH-HPSQAPTLPLLG-----LILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHS 250
Cdd:PRK08168 160 DRLAELLLLAAAALAYLEVGSLSLSALWaHLAAQGASPSLQaaallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 251 STMVVAGiFLLIRTHPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHI 330
Cdd:PRK08168 240 GVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHL 318
|
250
....*....|....*...
gi 1002166061 331 STHAFFKAMLFLCSGSII 348
Cdd:PRK08168 319 VAHSLYKAHAFLSASEAV 336
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-467 |
4.08e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 138.47 E-value: 4.08e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 78 IPISLKMDFYSLTFFPIALFVSWSILQFAswYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLI 157
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 158 SWwHGRAEANTAALQAVLYNRVGDIGLILCMAWL---ASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWL 234
Cdd:PRK08375 147 AM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLygvTGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 235 PAAMEGPTPVSALLHSSTMVVAGIFLLIRT-----HPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSS 309
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 310 QLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPF 386
Cdd:PRK08375 306 QMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 387 LAGFYSKDQIIesLSTSYLNTWALLLTLLATSF-TAVYtvrMTVLVQGGFVRIPP---LTPMNENNPAVTSPITRLALGS 462
Cdd:PRK08375 385 TSGFVSKWYLV--VGAVEAGQWLVLAVLLASSLlALLY---FLRIWYRAFFGPPPpgsEAPKQEAPLGMLAPSLALALLS 459
|
....*
gi 1002166061 463 ITAGF 467
Cdd:PRK08375 460 LLLGI 464
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-393 |
1.03e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 135.10 E-value: 1.03e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 1 MDLPLTLNTFMLLALATISTPIIFPLLSNRLKnTPATITNTVKASFLISLIPMTIYIHSGMESLT-TLWEWKFimhfKIP 79
Cdd:PRK12667 1 LAMDIVGLTPILLVLFAFLLPLLSILLKGNRK-IQKIYALLVSLITLILSILLFIQVYSSNKPIVyLFGGWPA----PIG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 80 ISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISW 159
Cdd:PRK12667 76 IVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 160 WHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHL----HHPSQAPTLPLLGLILAAAG------------ 223
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakiRGLSFPLTGGLAGNPPLALGvalalalwafti 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 224 KSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRTHPLFYNNQTALT--------LCLCLGAISTLFAATCAL 294
Cdd:PRK12667 236 KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIdfraalspILIILGAVSAIIGALMMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 295 TQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTT 371
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAA-GTRDIDELAGLGRKMPIAS 393
|
410 420
....*....|....*....|..
gi 1002166061 372 SCFTIGNLALMGTPFLAGFYSK 393
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK 415
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
125-408 |
2.44e-32 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 132.32 E-value: 2.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWE---IQ 201
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDfaaMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 202 HLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRTHPLFYNNQTALT--LC 278
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWgvLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 279 LCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNL-------PQLAFL-------HISTHAFFKAMLFLCS 344
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMvfiaygmPLLAALaltaalyHLLNHALFKSLLFLGA 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002166061 345 GSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIES-LSTSYLNTW 408
Cdd:PRK06521 360 GAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSlLSSPGLPQW 423
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
76-427 |
1.81e-30 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 125.19 E-value: 1.81e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 76 FKIPISLKMDFYSLTFFPIALFVSWsILQFASWymasdPYITK----FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGI 151
Cdd:COG1008 72 LGISYHLGVDGISLPLVLLTALLTP-LAILASW-----NEIKKrpklYYALLLLLEAGMIGVFLALDLFLFYVFWELMLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 152 MSFLLISWWhGRAEANTAALQAVLYNRVGDIGL---ILCMAWLA--STLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSA 226
Cdd:COG1008 146 PMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMlvaILALYFLAgaLTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 227 QFGLHPWLP-AAMEGPTPVSALLhSSTMVVAGIFLLIRTH-PLFYN-NQTALTLCLCLGAISTLFAATCALTQNDIKKII 303
Cdd:COG1008 225 MFPFHTWLPdAHVEAPTAGSVLL-AGVLLKMGGYGLLRFAlPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 304 AFSTSSQLGLMMV------TIGLnlpQLAFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIG 377
Cdd:COG1008 304 AYSSVSHMGFVLLgifalnPLGL---QGAVLQMVSHGLITAALFLLVGVLYDRT-HTRDIADLGGLAKRMPVLAALFLLA 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1002166061 378 NLALMGTPFLAGFYSKDQIIESLSTSylNTWALLLTLLATSFTAVYTVRM 427
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLILTAAYLLWM 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-399 |
3.27e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 124.82 E-value: 3.27e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 76 FKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFL 155
Cdd:PRK08376 80 FPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 156 LISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQAPTLPL----LGLILAA-AGKSAQFGL 230
Cdd:PRK08376 160 LVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVakiaLALFIAGlAMKSGAVPV 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 231 HPWLPAAM-EGPTPVSALLHSSTmvVAGIFLLIRTHPLFYNNQTALT----LCLCLGAISTLFAATCALTQNDIKKIIAF 305
Cdd:PRK08376 240 HMWLPDAYpAAPSSISAMLLVIK--QAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 306 STSSQLGLMMVTIGLNLPQL---------------AFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTT 370
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKT 396
|
330 340
....*....|....*....|....*....
gi 1002166061 371 TSCFTIGNLALMGTPFLAGFYSKDQIIES 399
Cdd:PRK08376 397 TIAFLIGAAAIVGLPPFNGFASKWLIYES 425
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
125-404 |
1.62e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 123.69 E-value: 1.62e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLH 204
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 205 HPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRTHPLFYNNQTAL-TLCLCLG 282
Cdd:PRK08667 199 ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgVLILLAG 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 283 AISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL-------NLPQLAFL-------HISTHAFFKAMLFLCSGSII 348
Cdd:PRK08667 278 SISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVV 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1002166061 349 HNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSY 404
Cdd:PRK08667 358 HAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-400 |
1.93e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 112.74 E-value: 1.93e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISwwHGRA-EANTAALQAVLYNRVGDIGLILCMAWLASTLNT 197
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA--YPRTdRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WEIQHLhhpSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTL 277
Cdd:PRK07234 174 FAFSGL---ATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 278 clcLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTiglnlPQLA-FLHIsTHAFFKAMLFLCSGsIIHNLNGEQD 356
Cdd:PRK07234 251 ---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGgLYAL-AHGLVKSTLFLCAG-ALPSRNFTEL 320
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1002166061 357 IRKMGGLQKMLPTTTSCFTIgnlalMGTPFLAGFYSKDQIIESL 400
Cdd:PRK07234 321 ISQMLGIGKWIPLTMASFSI-----AGFPLLAGFVSKVLTLKNL 359
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
69-403 |
1.72e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 110.29 E-value: 1.72e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 69 EWKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMAS---DPYITKFFTYLLLFLIAMLtLIVANNLFVLFIG 145
Cdd:PRK06589 66 QFELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAInniDSSSRFLFFFNLTILIGVL-IALSSDLFTMFVC 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 146 WEGVGIMSFLLISwwHGRAEANTAALQ---AVLYNRVGDIGLILCMAWLASTlNTWEIQHLHHPSQAPTLPLLGLILAAA 222
Cdd:PRK06589 145 YELLTISTAFLIG--HTRNNISLSGGYkylKILMISALLLFLPAVILIYTKT-GNLDFVSGGLFSKNQSIILLLMFIYGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 223 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTL-----CLCLGAISTLFAATC-ALTQ 296
Cdd:PRK06589 222 AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLkALKT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 297 NDIKKIIAFSTSSQLGLMMVTIGLNLPQ---LAFLHISTHAFFKAMLFLCSGSIIhNLNGEQDIRKMGGLQKMLPTTTSC 373
Cdd:PRK06589 302 DNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFI 380
|
330 340 350
....*....|....*....|....*....|
gi 1002166061 374 FTIGNLALMGTPFLAGFYSKDQIIESLSTS 403
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQ 410
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
122-440 |
1.92e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 110.24 E-value: 1.92e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 122 YLLLFLIAMLT---LIVANNLFVLFIGWEGVGIMSFLLISWwHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTW 198
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 199 EIQHLHHPSQA--PTLPLLGL---ILAAAGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRTHPLFYNNQ 272
Cdd:PRK08377 189 NMAHIAQLAGTidPTVAQVGLallIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNAN 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 273 ---TALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGS 346
Cdd:PRK08377 268 gwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGY 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 347 IIHNLNGEQdIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQII-ESLSTSYlnTWALLLTLLATSFTAVYTV 425
Cdd:PRK08377 348 VGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlAGLSAGY--TWPVALVLGASVVEAVYYF 424
|
330
....*....|....*..
gi 1002166061 426 RM--TVLVQGGFVRIPP 440
Cdd:PRK08377 425 RLihTMWFKGEGERIRE 441
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
80-400 |
8.99e-25 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 108.93 E-value: 8.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 80 ISLKMDFYSLTFFPIALFVSWSILQFA-SWYMASDPYitkFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLIS 158
Cdd:PRK08668 63 LTFTLTHLSWFFAMISLLVIFSVAFFMvSEKTKNDAY---FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 159 WwhGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEI----QHLHHPSQAPTLPLLGLILAAAG--KSAQFGLHP 232
Cdd:PRK08668 140 M--GKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisQGLINDTSTGFALIVFLFLLAFGvaKAGIFPLHV 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 233 WLPAAM-EGPTPVSALLhSSTMVVAGIFLLI------------------RTHPLFyNNQTALtlclcLGAISTLFAATCA 293
Cdd:PRK08668 218 WAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLlvlyvlpgtklfsefgtyRGVPLF-NYILAW-----LGNISIIVGTLMA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 294 LTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPTT 370
Cdd:PRK08668 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFT 369
|
330 340 350
....*....|....*....|....*....|
gi 1002166061 371 TSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:PRK08668 370 FAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-427 |
1.12e-24 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 107.60 E-value: 1.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 8 NTFMLLALATIStPIIFPLLSNRL-KNTPATITNTVKASFLISLIpMTIYIHSGMESLTTLWEWKF----IMHFKIPISL 82
Cdd:PRK05846 1 MNWPLLSLLIFL-PLIGGLLVLLTeRFGARLARWIALIGTLLTLL-LSLVLWIGFDSSNAGFQFVEkhpwIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 83 KMDFYSLTFFPIALFVSwSILQFASWYMASDpYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWhG 162
Cdd:PRK05846 79 GVDGISLLLVVLTALLT-PLAVLASWEEIKK-RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-G 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 163 RAEANTAALQAVLYNRVGD-------IGLILCMAWLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLP 235
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSllmlvaiIYLVVVYYNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 236 -AAMEGPTPVSALLhsstmvvAGIFLLIRTH-------PLFYN-NQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFS 306
Cdd:PRK05846 236 dAHVQAPTAGSVLL-------AGILLKMGAYgllrfslPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 307 TSSQLGLMMVTIG-LNLPQLA---FLHIStHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALM 382
Cdd:PRK05846 309 SISHMGFVTLGIFaGNQLGIQgaiFQMIS-HGLSSAALFLLVGVLYDRL-HTRDIADYGGLAKVMPVLAAFFLFFAMASL 386
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1002166061 383 GTPFLAGFYSKDQIIesLSTSYLNTWALLLTLLATSFTAVYTVRM 427
Cdd:PRK05846 387 GLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
134-397 |
9.90e-24 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 105.36 E-value: 9.90e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 134 IVANNLFVLFIGWEGVGIMSFLLIsWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQAPTLp 213
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAW- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 214 llgLILAAAG-KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYnnqtaltLCLCLGAISTLFAATC 292
Cdd:PRK12668 188 ---LILIGFGvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 293 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQL---AFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPT 369
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRT-GTEKLTELGGLYRSMPL 336
|
250 260
....*....|....*....|....*...
gi 1002166061 370 TTSCFTIGNLALMGTPFLAGFYSKDQII 397
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
105-403 |
5.67e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 93.56 E-value: 5.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 105 FASWYMASDPYItkFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRaEANTAALQAVLYNRVGDI-- 182
Cdd:PRK12561 77 FASWKVTRKPRL--FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIfi 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 183 ---GLILCMAWLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAM-EGPTPVSallhsstMVVAGI 258
Cdd:PRK12561 154 lvaGLALALSGDTFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 259 FLLIRTHPLFYNNQTALT--------LCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNLpq 324
Cdd:PRK12561 227 LLKMGGYALIRFNVQMLPdahvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG-- 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 325 lAFLHISTHAFFKAMLFLCSGSI---IHNLNgeqdIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLS 401
Cdd:PRK12561 305 -AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGIT 379
|
..
gi 1002166061 402 TS 403
Cdd:PRK12561 380 SS 381
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-427 |
1.29e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 92.10 E-value: 1.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 116 ITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAeANTAALQAVLYNRVG------DIGLILCMA 189
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 190 WLASTLNTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGIFLLIRT-HPL 267
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvYDV 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 268 FYNNQTALTL-----CLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQ---LAFLHISTHAFFKAM 339
Cdd:PRK12662 267 FKANFVFTTLpfnnvFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSA 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 340 LFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSylNTWALLLTLLATSF 419
Cdd:PRK12662 347 LFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSG 423
|
....*....
gi 1002166061 420 TAV-YTVRM 427
Cdd:PRK12662 424 LSViYVWKI 432
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-399 |
1.31e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 92.32 E-value: 1.31e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 80 ISLKMDFYSLTFFPIALFVSWSILQFaSWYMASDPYITKFFTYLLLFLI-----AMLTlivaNNLFVLFIGWEGVGIMSF 154
Cdd:PRK07691 71 IVFVADMFAALLVLTSSIITFLVILY-SFQTIGIERERYYYYPSVLFMLagvngAFLT----GDIFNLFVFFEVMLMASY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 155 LLISWWHGRAEANtAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHL--------HHPSQAPTLPLLGLILAAAGKSA 226
Cdd:PRK07691 146 VLIVIGGTKIQLR-ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsvkiaelsAGQTGLITVVAILFLFVFATKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 227 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALT--LCLCLGAISTLFAATCALTQNDIKKIIA 304
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 305 FSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHnLNGEQDIRKMGGLQKMLPTTTSCFTIGNLAL 381
Cdd:PRK07691 305 YNIMIAVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSL 383
|
330
....*....|....*...
gi 1002166061 382 MGTPFLAGFYSKDQIIES 399
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEG 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-392 |
2.00e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 91.53 E-value: 2.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 9 TFMLLALATISTPIIFPLLSNRLKNTPATITNTVKASFLISLIPMTIYIHS-GMESLTTLWEWKFImhfkipislkmDFY 87
Cdd:PRK06458 2 SYSILFALLLLIPLLASLLLFALRKRRLVATLNVLGITLTLILALWLVFTVpDAGEIFAAGLWFFI-----------DDL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 88 SLTFFPIALFVSWSILQFASWYMA--------SDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISW 159
Cdd:PRK06458 71 NVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 160 WhGRAEANTAALQAVLYNRVGD----IGLILCMAWLASTLNT------WEIQHLHHPSQAPTLPLLGLILAAAG---KSA 226
Cdd:PRK06458 151 Y-RTRASLEAAWKYIIICSVGVafalFGTILVYANAATVMGDgemailWTELLKHASLLDPTLMKLAFVFLLIGfgtKVG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 227 QFGLHPWLP-AAMEGPTPVSALLHSSTMVVAgIFLLIRTHPLFYNNQTAL---TLCLCLGAISTLFAATCALTQNDIKKI 302
Cdd:PRK06458 230 LFPMHAWLPdAHSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAIGSDfpgRLLLIFGLLSVLVAAFFLLRQRDIKRL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 303 IAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCSGSIIHNLnGEQDIRKMGGLQKMLPTTTSCFTIGNL 379
Cdd:PRK06458 309 FAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGWGLMLGAL 387
|
410
....*....|...
gi 1002166061 380 ALMGTPFLAGFYS 392
Cdd:PRK06458 388 AIAGMPPFGVFIS 400
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
125-356 |
2.09e-19 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 91.86 E-value: 2.09e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 125 LFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLI----SWWHGRAeantaALQAVLYNRVGDIG---LILCMAWLASTLNT 197
Cdd:MTH00063 84 LFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLIlfydNFLSLRA-----SVVTLVSSRFGDVClflLIGLSCWGGSGSFL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WeiqhlhhpsqaptlpLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQTALTL 277
Cdd:MTH00063 159 C---------------CLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFF 223
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 278 CLCLgAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGSIIHNLNGEQD 356
Cdd:MTH00063 224 SVLL-LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQS 301
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
94-352 |
3.67e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.87 E-value: 3.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 94 IALFVS---WSILQFASWYMASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAA 170
Cdd:PRK08601 77 MAFFVLtlgFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 171 LQAVLYNRVGDIGLILCMAWLASTLNTWeiqHLHHPSQAPTLPLLG----------LILAAAGKSAQFGLHPWLPAAMEG 240
Cdd:PRK08601 157 KISGMLFLISWLALALAIVWLFIATGEW---QLTSVLSNENLAQLGtwektginllLILAVMIPAAQWPFQRWLIESAVA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 241 PTPVSALLHSStMVVAGIFLLIRTHPLFyNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGL 320
Cdd:PRK08601 234 PTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCAL 311
|
250 260 270
....*....|....*....|....*....|..
gi 1002166061 321 NLPQLAFLHISTHAFFKAMLFLCSGSIIHNLN 352
Cdd:PRK08601 312 GAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
81-393 |
8.22e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 89.41 E-value: 8.22e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 81 SLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFFTYLLLF-LIAMLTLIVANNLFVLFIGWEGVGIMSFLLISW 159
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVAF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 160 WHGRAEANTAALQAVLYNRVGDIGLILCMAWL---ASTLNTWEI-QHLHHPSQAPTLPLLGLILAAAG---KSAQFGLHP 232
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLygaTGSLNLAGIaAALAAGGANSPLLLLGLVLVLAGlafKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 233 WLPAAMEG-PTPVSALLhSSTMVVAGIFLLIR-THPLFYNNQTALTLCL-CLGAISTLFAATCALTQNDIKKIIAFSTSS 309
Cdd:COG1007 225 WTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRlLVEAFPGLAADWQLLLaVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 310 QLGLMMVTIgLNLPQLAF----LHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTP 385
Cdd:COG1007 304 HAGYLLLGL-AAGTPLGVsaalFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
....*...
gi 1002166061 386 FLAGFYSK 393
Cdd:COG1007 383 PTAGFFGK 390
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-466 |
3.26e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.45 E-value: 3.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWwHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTW 198
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITL-GQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 199 EIQH----LHHPSQAPTLPLLG--LILAAAGKSAQFGLHpWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNQ 272
Cdd:PRK12663 189 NMAHiamrLNDMGDTATLTTIAllFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQE 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 273 TALT--LCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlpqlAFLHISTHAFF-------KAMLFLC 343
Cdd:PRK12663 268 RELLhpLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG----TPAGINGAIFYlvhdmvvKTALFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 344 SGSIIHnLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIE-SLSTSYlntWALLLTLLATSFTAV 422
Cdd:PRK12663 344 AGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGA---YILLALMLITSLITM 419
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1002166061 423 YTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALGSITAG 466
Cdd:PRK12663 420 YSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
118-392 |
6.71e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 74.35 E-value: 6.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 118 KFFTYLLLFLIAMLT-LIVANNLFVLFIGWEGVGIMSFLLISWWHGrAEANTAALQAVLYNRVGDIGLI---LCMAWLAS 193
Cdd:PRK06473 107 RFYYSLLLLLNAGVSgAFLAQDLLLFFLFYELELIPLYLLIAIWGG-QRRGYAATKFLLYTAISGILILvsfLGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 194 TLN-TWEIQHLHHPSQAPTLPLLGLILAAAG-KSAQFGLHPWLP-AAMEGPTPVSALLhsstmvvAGIFLLIRTHPL--- 267
Cdd:PRK06473 186 ASSfDYEPLRSHTLPLSTQLLLLAPILVGFGiKIPLVPFHTWLPdAHVEASTPVSVLL-------AGVLLKLGTYGLlrf 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 268 ----FYNNQTALTLCLC-LGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAM 339
Cdd:PRK06473 259 gvglFPEAWVYLAPWLAtWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISAL 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1002166061 340 LFLCSGsIIHNLNGEQDIRKMGGL---QKMLPTTTSCFTIGNLALMGTPFLAGFYS 392
Cdd:PRK06473 339 LFLLVG-VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIA 393
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
119-461 |
2.88e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.48 E-value: 2.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANtAALQAVLYNRVGD----IGLILCMAWLAST 194
Cdd:PRK08676 104 FYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENID-AALKYIFIASTAMifafIGLIFLFSLTRQA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 195 LNT----WEIQHLHHPSQAPTLPLLGLILAAAG---KSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGIFLLIRTHP 266
Cdd:PRK08676 183 LGTgtlnWTELAAHASLLSPSVLGASFLFIFIGflaKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSA 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 267 LFYNNQ---TALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAF---LHISTHAFFKAML 340
Cdd:PRK08676 262 LLRQSGaaeQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 341 FLCSGsIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIesLSTSYLNTWALLL-----TLL 415
Cdd:PRK08676 342 FFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL--LQLGGISVWLVLAvllllLLA 418
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1002166061 416 ATSFTAVYTVRMTVLVQGGFVRIPPLTPMNENNPAVTSPITRLALG 461
Cdd:PRK08676 419 ASSFAIFLLKAFTRVSEGNADRPVFRTPLSMKLPIVIILALVLALG 464
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
111-393 |
2.03e-12 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 69.46 E-value: 2.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 111 ASDPYITKFFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQavlYNRVGDIG---LILC 187
Cdd:PRK05777 97 LEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIK---YFVLGALAsgfLLYG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 188 MAWL---ASTLNTWEIQH-LHHPSQAPTLPLLGLILAAAG---KSAQFGLHPWLPAAMEG-PTPVSALLHSSTMvVAGIF 259
Cdd:PRK05777 174 MSLLygaTGSLSFAGIAKaLADGSGNSLLLLFGLVFLLVGlafKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFA 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 260 LLIRT-----HPLFYNNQTALTLclcLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMV------TIGLnlpQLAFL 328
Cdd:PRK05777 253 VLLRLlvvafGGLSEDWQQVLAI---IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaagtAEGY---SAVLF 326
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002166061 329 HISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSK 393
Cdd:PRK05777 327 YLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
217-393 |
3.16e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.23 E-value: 3.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 217 LILAAAGKSAQFGLHPWLPAAM-EGPTPVSA----LLhssTMVvaGIFLLIRTHPLFYNNQTALTLCLCLGAISTLFAAT 291
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGIL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 292 CALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQ---LAFLHISTHAFFKAMLFLCSGsIIHNLNGEQDIRKMGGLQKMLP 368
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASP 368
|
170 180
....*....|....*....|....*
gi 1002166061 369 TTTSCFTIGNLALMGTPFLAGFYSK 393
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
79-390 |
3.67e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 68.79 E-value: 3.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 79 PISLKMDFYSLTFFPIALF-VSWSILqfASWYmaSDPYITKFFTYLLLFLIAMLTLIVAN-NLFVLFIGWEGVGIMSFLL 156
Cdd:MTH00226 95 PLVFAVDGISIYFIILTGFiVPCSIL--ISWH--SVKYLTKSFLICMLILEFLLYAVFSVlDIFMFYILFEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 157 ISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHH-----PSQAPTLPLLGLILAAAGKSAQFGLH 231
Cdd:MTH00226 171 LGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAScshvvSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 232 PWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRTHPLF-YNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSS 309
Cdd:MTH00226 251 IWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 310 QLGLMMVT------IGLNLPQLAFLhisTHAFFKAMLFLCSgSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMG 383
Cdd:MTH00226 331 HMGLVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
....*..
gi 1002166061 384 TPFLAGF 390
Cdd:MTH00226 407 VPPSGNF 413
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
82-403 |
7.00e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 68.19 E-value: 7.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 82 LKMDFYSLTFFPIALFVswsilqFASWYMASDPyitKFFTYLLLFLIA-MLTLIVANNLFVLFIGWEGVGIMSFLLISWW 160
Cdd:PRK02546 88 LSMPLILLTGFITTLAV------LAAWPVTFKP---KLFYFLMLAMYGgQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 161 HGRAEaNTAALQAVLYNRVGDIGLI---LCMAWLASTLnTWEIQHLHHPSQAPTLPLL---GLILAAAGKSAQFGLHPWL 234
Cdd:PRK02546 159 GGKKR-QYAATKFILYTAGSSLFILlaaLAMAFYGDTP-TFDMTALAAKDFGLGFQLLcyaGLLIAYGVKLPIVPLHTWL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 235 PAAM-EGPTPVSALLhsstmvvAGIFLLIRTHPLFYNNQTALT--------LCLCLGAISTLFAATCALTQNDIKKIIAF 305
Cdd:PRK02546 237 PDAHgEATAPVHMLL-------AGILLKMGGYALLRMNAGMLPdahaqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 306 STSSQLGLMMVTIGlNLPQL----AFLHISTHAFFKAMLFLCSGSI---IHNLNGEQdirkMGGLQKMLPTTTSCFTIGN 378
Cdd:PRK02546 310 SSISHMGFVLIGIG-SFTDLgtsgAMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACS 384
|
330 340
....*....|....*....|....*
gi 1002166061 379 LALMGTPFLAGFYSKDQIIESLSTS 403
Cdd:PRK02546 385 LASLALPGMSGFVAELMVFVGFATS 409
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
106-390 |
9.32e-11 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 64.58 E-value: 9.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 106 ASWYMASDPyitKFFTYLLLfliAM----LTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEAnTAALQAVLYNRVGD 181
Cdd:CHL00011 103 AAWPVTRNS---RLFYFLML---AMysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGS 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 182 IGL---ILCMAWLASTLNTWEIQHLHHPSQAPTLPLL---GLILAAAGKSAQFGLHPWLPaamegPTPVSAllHSST-MV 254
Cdd:CHL00011 176 IFLligVLGMGLYGSNEPTLNFETLANQSYPVALEILfyiGFLIAYAVKLPIIPLHTWLP-----DTHGEA--HYSTcML 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 255 VAGIFL------LIR--------THPLFynnqtALTLCLcLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI-- 318
Cdd:CHL00011 249 LAGILLkmgaygLIRinmellphAHSIF-----SPWLVI-VGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIgs 322
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 319 ----GLNlpqLAFLHISTHAFFKAMLFLCSGSI---IHNLNGEQdirkMGGLQKMLPTTTSCFTIGNLALMGTPFLAGF 390
Cdd:CHL00011 323 itdtGLN---GAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGF 394
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
79-392 |
9.51e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 64.31 E-value: 9.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 79 PISLKMDFYSLTFF-------PIALFVSWSilqfaswymaSDPYITKFFTYLLLFLIAMLT-LIVANNLFVLFIGWEGVG 150
Cdd:MTH00204 76 PLVFAVDGVSLFFIllttlliPICILISWK----------SIKFLFKEFLLCLLFLEVLLIgVFSVLDLLLFYILFEGIL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 151 IMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHH---PSQAPTLPLLGLILAAAGKSAQ 227
Cdd:MTH00204 146 IPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNiklPLSIQKWLLVGFFLSLAVKIPQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 228 FGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRTHPLF-YNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAF 305
Cdd:MTH00204 226 IPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 306 STSSQLGLmmVTIGL------NLPQLAFLHIStHAFFKAMLFLCSgSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNL 379
Cdd:MTH00204 306 SSVAHMGL--VPLGLfthtieGLVAAVFLMLA-HGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSL 381
|
330
....*....|....*..
gi 1002166061 380 ALMGTP----FLAGFYS 392
Cdd:MTH00204 382 ANMGFPlscnFVGEFFS 398
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
230-390 |
2.01e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 63.69 E-value: 2.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 230 LHPWLPAAMEGPTPVSALLHSSTMVVAGIF------LLIRTHPLFYNnqtalTLCLCLGAISTLFAATCALTQNDIKKII 303
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWG-----VALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 304 AFSTSSQLGLMMVTIG-------LNLPQLAFL-------HISTHAFFKAMLFLCSGSIIHNlNGEQDIRKMGGLQKMLPT 369
Cdd:PRK08042 274 AYHTLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPV 352
|
170 180
....*....|....*....|.
gi 1002166061 370 TTSCFTIGNLALMGTPFLAGF 390
Cdd:PRK08042 353 ISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
120-399 |
2.34e-10 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 63.13 E-value: 2.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 120 FTYLLLFLIAMLTLIV-ANNLFVLFIGWEGVGIMSFLLIsWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTW 198
Cdd:PRK06277 102 YVFLMLMGLASVSAIVlADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 199 EIQHLHHPSQA-PTLP--LLGLILAAAGKSAQFGLHPW--LPAAM--EGPTPVSALLHS-STMVVAGIFLLIrtHPLFYN 270
Cdd:PRK06277 181 NITDIHNALLVnPTSPviYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTfSKFVLVALMLVI--FKLFGG 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 271 NQ---TALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFLCS 344
Cdd:PRK06277 259 LSyfpSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGA 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1002166061 345 GsIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIES 399
Cdd:PRK06277 339 G-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA 392
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
119-390 |
7.81e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 61.65 E-value: 7.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEAnTAALQAVLYNRVGD---IGLILCMAWLA-ST 194
Cdd:PRK07363 109 YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVWLSgST 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 195 LNTWEIQHLHHPSQAPTLPLLGLILAAAG-KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTH-PLFYN-- 270
Cdd:PRK07363 188 SFDYDAISTQNLSLNTQLILLTGLLLGFGiKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGlQLFPQtw 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 271 NQTALTLCLcLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVT--IGLNLPQL-AFLHISTHAFFKAMLFLCSGsI 347
Cdd:PRK07363 268 SLVAPGLAI-IGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAaaAGTQLSLLgAVAQMISHGLILALLFHLVG-I 345
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1002166061 348 IHNLNGEQDIRKMGGLQ---KMLPTTTSCFTIGNLALMGTPFLAGF 390
Cdd:PRK07363 346 VERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGF 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
43-393 |
8.29e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.56 E-value: 8.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 43 KASFLISLIPMTIYIHSGMeslTTLWEWKFIMHFKIPISLKMDFYSLTF-FPIALFVSWSILQFASWYMASDPYITKFFT 121
Cdd:CHL00049 39 KDIPWLYFISSTSLVMSIT---ALLFQWREEPMISFSGNFQTNNFNEIFqFLILLCSTLCIPLSVEYIECTEMAITEFLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 122 YLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWL----ASTLNT 197
Cdd:CHL00049 116 FVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsGGEIEL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WEIQH--LHHPSQAPTLPLLGLILAAAG---KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGIFLLIRT-HPLFYN 270
Cdd:CHL00049 196 QEIVNglINTQMYNSPGISIALIFITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIfDIPFYF 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 271 NQTALTLCLCLGAI-STLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFkaMLFLCSGS--- 346
Cdd:CHL00049 275 SSNEWHLLLEILAIlSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfac 352
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1002166061 347 -IIHNL-NGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSK 393
Cdd:CHL00049 353 iVLFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
70-120 |
1.37e-09 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 53.97 E-value: 1.37e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1002166061 70 WKFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQFASWYMASDPYITKFF 120
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
191-402 |
9.66e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 57.52 E-value: 9.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 191 LASTLN-----TWEIQHLHHPsQAPTLpllgLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTH 265
Cdd:MTH00112 72 FSSTTNawntgQWDITQLTNP-TSCTL----LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 266 plfynNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlPQLAFLHISTHAFFKAMLFLcsg 345
Cdd:MTH00112 147 -----NSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL--- 217
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1002166061 346 siIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLST 402
Cdd:MTH00112 218 --TLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTK 272
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
89-347 |
6.47e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 55.57 E-value: 6.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 89 LTFFPIalfVSWSILQFASWYMASDPYITKFFTYLLLFLI-AMLTLIVANNLFVLFIGWEGVGIMSFLLISWWhgrAEAN 167
Cdd:PRK06459 46 LSFFSI---ISTIVWILASLYSIEYDHYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KKNK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 168 TAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLhhPSQAPtlpllgLILAAAGKSAQFGLHP-----WLPAAM-EGP 241
Cdd:PRK06459 120 RPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYL--PSPVP------LILASFGFIIKMGMMPflvseWLPIAHgNAP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 242 TPVSALLhSSTMVVAGIFLLIRTHPLFYN---NQTALTLcLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI 318
Cdd:PRK06459 192 SNFSAIL-SATMTLMGVYGILKMTILTQTipiGYFGLTI-LAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAL 269
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1002166061 319 GL-----NLPQL--------AFLHISTHAFFKAMLFLCSGSI 347
Cdd:PRK06459 270 GLymvtkQLITSiehfslitVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
71-434 |
1.86e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 53.79 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 71 KFIMHFKIPISLKMDFYSLTFFPIALFVSWSILQF------------------------ASWYMASDPYITKFFTYLLLF 126
Cdd:MTH00206 19 KWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLylsydplssplvilscwllplmflASQNHMKNEPINRQRIYITLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 127 LIAMLTLIV---ANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLAS---TLNTWEI 200
Cdd:MTH00206 99 IVLQLFLILffsSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNslgSLSLYIL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 201 QHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRTHPLF-YNNQ 272
Cdd:MTH00206 179 YFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILgPSTK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 273 TALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFlCSGSIIH 349
Cdd:MTH00206 252 LSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 350 NLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTsyLNTWALLLTLLATSFTAVYTVRMTV 429
Cdd:MTH00206 331 ERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFS--WSNFTLPLLGLGFLFTAIYSLYMFV 408
|
....*
gi 1002166061 430 LVQGG 434
Cdd:MTH00206 409 MTQHG 413
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
46-318 |
6.00e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 52.08 E-value: 6.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 46 FLISLIPMTIY------IHSGMESLTTLWEWKFIM---HFKIPISLKMDFYSLTFFPIALFVSWSILqFASWYMASDPYI 116
Cdd:MTH00163 7 MLLFLIPLCFLknswwlVQSLLFLLSFLFMLLFSLsfyFSNISYFFGLDLLSFGLILLSFWICMLMI-LSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 117 TKFFTYLLLFLIAMLTLI-VANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTL 195
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 196 NTWEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRTHPLF 268
Cdd:MTH00163 166 GSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFF 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002166061 269 YNNQTAL-TLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI 318
Cdd:MTH00163 239 SKLGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
192-401 |
2.35e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 49.80 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 192 ASTLN-----TWEIQHLHHPsqaptLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHP 266
Cdd:MTH00135 73 ASTTNawltgQWDIQQMSHP-----LPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 267 lfyNNQTALTLclcLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlPQLAFLHISTHAFFKAMLFLcsgs 346
Cdd:MTH00135 148 ---TNPTLLIT---LGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFS-PSLTLLALLTYIIMTSSAFL---- 216
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1002166061 347 iIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLS 401
Cdd:MTH00135 217 -TFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELT 270
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
279-406 |
5.85e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 49.34 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 279 LCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQ-----LAFLHISTHAFFKAMLFLCSGSIIhNLNG 353
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTR 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1002166061 354 EQDIRKMGGLQKMlPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYLN 406
Cdd:PRK12664 284 KFNLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
80-318 |
1.62e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.67 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 80 ISLKMDFYSLTFFPIALFVSWSILQF-ASWYMASDPYITKFFTYLLLFLIAMLTL-IVANNLFVLFIGWEGVGIMSFLLI 157
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVlASYKVFKSNKNSKLFTVSVIMLLLILILsFSVDNLLLFYITFEASLIPTLILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 158 SWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTWEIQHLHHPSQAP---TLPLLGLILAAAGKSAQFGLHPWL 234
Cdd:MTH00205 129 LGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDfylFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 235 PAA-MEGPTpvsallhSSTMVVAGIFL------LIR-THPLFYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFS 306
Cdd:MTH00205 209 PKAhVEAPV-------SGSMILAGVLLklggygLIRiTSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYS 281
|
250
....*....|..
gi 1002166061 307 TSSQLGLMMVTI 318
Cdd:MTH00205 282 SVGHMGLMVVGV 293
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
47-314 |
4.07e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 46.27 E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 47 LISLIPMTIYIHSGMESLTTLWEWKFIMHFKIPISLKM-------DFYSLTFFPIALFVSWSILQFASWYMASDPYITKF 119
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMfteslssDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 120 FTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTwe 199
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNS-- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 200 IQHLHHPSQAPTLPLLGL-----ILAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRTHPL 267
Cdd:MTH00014 171 LSMLMSSMEPPSIYLMNLwwlitILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1002166061 268 FYNNQTALT-----LCLCLGAISTLfaaTCaLTQNDIKKIIAFSTSSQLGLM 314
Cdd:MTH00014 244 FMHINKSLSapfssISLVGAVITSL---IC-IRQPDLKSLIAYSSVGHMGLM 291
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
192-400 |
5.64e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 45.68 E-value: 5.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 192 ASTLNT-----WEIQHLHHPsqaptLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHP 266
Cdd:MTH00070 73 SSTINAwftgeWTIMNMQTP-----LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 267 LfynnqTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlPQLAFLH-----ISTHAFFKAMLF 341
Cdd:MTH00070 148 L-----LNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMN 221
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1002166061 342 LCSGSiihnlngeqdIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESL 400
Cdd:MTH00070 222 LNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQEL 270
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
110-403 |
7.57e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.16 E-value: 7.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 110 MASDPYITKFFTYLLLfliAMLTLIVANNLFVLFIGWEgVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMA 189
Cdd:MTH00011 2 MSTFPTMFLFSSTMTL---GTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 190 WLASTlntweiqhlhhPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIrthplFY 269
Cdd:MTH00011 78 MMWSF-----------PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF-----FF 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 270 NNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlPQLAFLHISTHAFFKAMLFLcsgsIIH 349
Cdd:MTH00011 142 TSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFS-PSMAILYFMTYIIITTPLML----LFA 216
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1002166061 350 NLNgEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTS 403
Cdd:MTH00011 217 YLN-AFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSN 269
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
119-314 |
2.17e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 44.20 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 119 FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTW 198
Cdd:MTH00044 96 FISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 199 EIQhLHHPSQAPTLPLLGL-------ILAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL------LIRT 264
Cdd:MTH00044 176 SIP-LSELNWLTSLSSNSSsiwwifcILAFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRL 247
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1002166061 265 HPLFY-----NNQTALTLCLCLGAISTlfaATCALTQNDIKKIIAFSTSSQLGLM 314
Cdd:MTH00044 248 INLFSlpsanNISFILIVFCCWGALIT---SIICLRQTDLKALIAYSSVGHMSLV 299
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
120-405 |
3.65e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.03 E-value: 3.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 120 FTYLLLFLIAMLTLIV-ANNLFVLFIGWEGVGIMSFLLISWWHGrAEANTAALQAVLYNRVGDIGLILCMAWLASTLNTW 198
Cdd:MTH00200 6 LPLFILSLGLGTLLTFsSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 199 EIQHLHHPsqaptLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFYNNqtaltLC 278
Cdd:MTH00200 85 GISEMLGP-----LSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----IL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 279 LCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNlPQLAFLHISTHAFFKAMLFLcsgsiIHNLNGEQDIR 358
Cdd:MTH00200 155 LLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLLNSTKIN 228
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1002166061 359 KMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTSYL 405
Cdd:MTH00200 229 SLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGL 275
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
121-435 |
4.52e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 42.98 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 121 TYLLLFLIAMLTLIVA---NNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWLASTLNT 197
Cdd:MTH00068 94 TYISMLIILQLTLILAfsaTELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGS 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WEI------QHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL------LIRT 264
Cdd:MTH00068 174 LSLillelmSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRI 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 265 HPLFYNNQTALTLCLCLGAI-STLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP----QLAFLHIStHAFFKAM 339
Cdd:MTH00068 247 SILLTPLSKELSYPFIILALwGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPwsfsGAIILMIS-HGLTSSA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 340 LFlCsgsiIHNLNGEQDIRK----MGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLSTsyLNTWALLLTLL 415
Cdd:MTH00068 326 LF-C----LANTNYERTHSRtlllLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFN--WSNWTILITGL 398
|
330 340
....*....|....*....|
gi 1002166061 416 ATSFTAVYTVRMTVLVQGGF 435
Cdd:MTH00068 399 GTLITAAYTLYMFLMTQRGP 418
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
231-400 |
1.14e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.55 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 231 HPWLPAAMEG-PTPVSALLhsSTMVVAGIFLLIRTHPLFYNnqtaltLCLCLGAISTLFAATCALTQNDIKKIIAFSTSS 309
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNVN------ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 310 QLGLmmVTIGLNLPQLAFLHIS-THAFFKAMLFLCSGSIIHNLNGEQD-IRKMGGLQKMLPTTTSCFTIGNLALMGTPFL 387
Cdd:MTH00196 187 HMGF--VLWGIEIGSFESIQASlVYLFIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPL 264
|
170
....*....|...
gi 1002166061 388 AGFYSKDQIIESL 400
Cdd:MTH00196 265 VGFLGKWLILLSG 277
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
110-385 |
1.34e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 41.33 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 110 MASDPYITK--FFTYLLLFLIAMLTLIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILC 187
Cdd:MTH00124 84 LQHEPLQRKrtFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 188 MAWLASTLNT--WEIQHLHHP----SQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL 260
Cdd:MTH00124 164 ILYLHNQTGTlsLPMLQLTHPtltnSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 261 ------LIRTHPLFYNNQTALT---LCLCL-GAISTlfAATCaLTQNDIKKIIAFSTSSQLGLMMVTIGLNLPqLAF--- 327
Cdd:MTH00124 237 klggygIIRITLLLPPLSNTLHypfLTLALwGALMT--SLIC-LRQTDLKSLIAYSSVSHMGLVIAATMIQTP-WSLsga 312
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 328 --LHIStHAFFKAMLFlCSGSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTP 385
Cdd:MTH00124 313 miLMIA-HGLTSSMLF-CLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALP 370
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
211-403 |
2.13e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.68 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 211 TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIrthplFYNNQTALTLCLCLGAISTLFAA 290
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLI-----SISNLLNSNILILCGILSVLVGG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 291 TCALTQNDIKKIIAFSTSSQLGLMMVTIGlNLPQLAFLHISTHAFFKAMLFLcsgsiIHNLNGEQDIRKMGGLQKMLPTT 370
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSA-YSPNASIIMFLIYIIINTSIFL-----IGNNFSLSTLSHLNKLSQLNPIS 240
|
170 180 190
....*....|....*....|....*....|...
gi 1002166061 371 TSCFTIGNLALMGTPFLAGFYSKDQIIESLSTS 403
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQN 273
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
126-314 |
4.21e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 39.82 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 126 FLIAMLTLIV-----ANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLILCMAWL---ASTLNT 197
Cdd:MTH00150 59 LLVLLLCLILvlafsVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMsssYGSSFM 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 198 WEIQHLHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGIFL------LIRTHPLF-Y 269
Cdd:MTH00150 139 LLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFsL 211
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1002166061 270 NNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLM 314
Cdd:MTH00150 212 SSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
115-434 |
5.47e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 39.55 E-value: 5.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 115 YITkFFTYLLLFLIAMLTlivANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDIGLI---LCMAWL 191
Cdd:MTH00127 96 YIT-LLTSLQIFLILAFG---ATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLvalLLLQNS 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 192 ASTLNTWEIQH---LHHPSQAPTLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGIFLLIRTHPL 267
Cdd:MTH00127 172 TGTLSMLTLQYsqpLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMVML 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 268 FYNNQTALTLCLCLGAISTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLP---QLAFLHISTHAFFKAMLFlCS 344
Cdd:MTH00127 252 DPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwgfTGALILMIAHGLTSSALF-CL 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002166061 345 GSIIHNLNGEQDIRKMGGLQKMLPTTTSCFTIGNLALMGTPFLAGFYSKDQIIESLstSYLNTWALLLTLLATSFTAVYT 424
Cdd:MTH00127 331 ANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSL--FNWSPWTLALTGLGTLITAGYS 408
|
330
....*....|
gi 1002166061 425 VRMTVLVQGG 434
Cdd:MTH00127 409 LYMFLMTQRG 418
|
|
| |
