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Conserved domains on  [gi|1002160258|ref|YP_009230402|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Ara ararauna]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 9.75e-59

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 176.26  E-value: 9.75e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  81 QLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 9.75e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 176.26  E-value: 9.75e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  81 QLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.81e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 96.34  E-value: 1.81e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258  20 TLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLKH-PTITLTWASTIILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1002160258  99 LTLGLIYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 4.95e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 4.95e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   4 ITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLK 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1002160258  84 HPTIT-LTWASTIILLLTLGLIYEWTQGGLEW 114
Cdd:COG0838    86 ELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 9.75e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 176.26  E-value: 9.75e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  81 QLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 8.08e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 163.90  E-value: 8.08e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   2 NMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002160258  82 LKHPTITLTWASTIILLLTLGLIYEWTQGGLEWA 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 1.28e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 163.24  E-value: 1.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   3 MITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQL 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002160258  83 KHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00069   81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 5.62e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 138.92  E-value: 5.62e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMItFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00106    1 MNLM-LTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  81 QLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 6.31e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 126.25  E-value: 6.31e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  81 QLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 1.74e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 120.00  E-value: 1.74e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1002160258  81 QLKHPtiTLTWASTIILLLTLGLIYEWTQGGLEW 114
Cdd:MTH00203   81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 4.53e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 98.78  E-value: 4.53e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQM-IPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1002160258  80 TQLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.81e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 96.34  E-value: 1.81e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258  20 TLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLKH-PTITLTWASTIILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 1002160258  99 LTLGLIYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 3.75e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.69  E-value: 3.75e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   3 MITFMLASSIVLSMALTTLNFWLT-QMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSkKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1002160258  82 LKHPTITLTWASTIILLLTLGLIYEWTQGGLEW 114
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 6.00e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 90.92  E-value: 6.00e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   4 ITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLK 83
Cdd:MTH00055    8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1002160258  84 HPTITLTWASTIILLLTLG-LIYEWTQGGLEW 114
Cdd:MTH00055   86 QIGLFGFWVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.43e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 90.05  E-value: 1.43e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLT-QMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1002160258  80 TQLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 4.95e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 4.95e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   4 ITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLK 83
Cdd:COG0838     8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1002160258  84 HPTIT-LTWASTIILLLTLGLIYEWTQGGLEW 114
Cdd:COG0838    86 ELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-115 6.41e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 83.37  E-value: 6.41e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   8 LASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLKHPTI 87
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92

                          90       100
                  ....*....|....*....|....*....
gi 1002160258  88 TLTW-ASTIILLLTLGLIYEWTQGGLEWA 115
Cdd:PRK06602   93 LGFVeAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-114 2.97e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 81.26  E-value: 2.97e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   4 ITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLK 83
Cdd:MTH00018    3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1002160258  84 HPTITLTWASTIILLLTLG-LIYEWTQGGLEW 114
Cdd:MTH00018   81 QIAPFGFWTMVGFLFILTLgLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 9.50e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 80.29  E-value: 9.50e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWL-TQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1002160258  80 TQLKHPTITLTWASTIILLLTLGLIYEWTQGGLEWA 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 12-114 5.08e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.73  E-value: 5.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258  12 IVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLKHPTITLTW 91
Cdd:MTH00030   21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFW 98

                          90       100
                  ....*....|....*....|....
gi 1002160258  92 ASTIILLLTLG-LIYEWTQGGLEW 114
Cdd:MTH00030   99 IVYTFLIVLAIgLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 3.81e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 55.45  E-value: 3.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258  34 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLKH-PTITLTWASTIILLLTLGLIYEWTQG 110
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114


                  ....
gi 1002160258 111 GLEW 114
Cdd:PRK07928  115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 5-114 7.74e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.60  E-value: 7.74e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258   5 TFMLASSIVLSMALTTLNfWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLKH 84
Cdd:CHL00022   12 AFLIISSLIPILAFLISG-LLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1002160258  85 PTI-TLTWASTIILLLTLGLIYEWTQGGLEW 114
Cdd:CHL00022   89 LGVsAFIEALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-74 1.50e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 48.74  E-value: 1.50e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002160258   1 MNMITFMLASSIVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
12-114 4.80e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 47.43  E-value: 4.80e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160258  12 IVLSMALTTLNFWLTQMIPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQLKHPTI-TLT 90
Cdd:PRK07756   20 ILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALI 97

                          90       100
                  ....*....|....*....|....
gi 1002160258  91 WASTIILLLTLGLIYEWTQGGLEW 114
Cdd:PRK07756   98 EMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-83 8.38e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.96  E-value: 8.38e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1002160258  34 KLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWATQLK 83
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 2.81e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.27  E-value: 2.81e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1002160258  36 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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