|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 721.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWGWC 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 685.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETgWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 677.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGwSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 643.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSnLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFS-LLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWG 457
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILG 456
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 554.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 3 KILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 83 NHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 163 VALLLMQNDSGTLSMFTLQYMQpmhLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 243 GMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 323 ASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 120586734 403 ITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.63e-173 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 494.49 E-value: 1.63e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLD-PLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 320 HGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 120586734 400 GTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-459 |
9.97e-130 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 381.49 E-value: 9.97e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 49 GWSSSNLYLATDPLSTPLLVLTCWLLPLMILASQNHLSPepLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLL 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFtLQYMQPMHLLTWGdkLWWAACLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFML-LISSLRKLLSSMG--LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 289 YSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 369 ALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 120586734 449 ILKPELMWGWC 459
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
4.46e-129 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 381.04 E-value: 4.46e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLwttsiAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPepLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLtwgdklWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFGSLNFL------WYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
3.60e-122 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 363.68 E-value: 3.60e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPtIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSeTGWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEplNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 161 LLVALLLMQNDSGTLSMFTLQYMQPMHLLTwgdKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 241 GYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 321 GLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 401 TLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLILKPELMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-454 |
1.17e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 344.27 E-value: 1.17e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 28 IAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILASQNHLSPEplNRQRAYISLLVSLQTFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 108 VLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFtlqYMQPMH 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 188 LLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 268 WGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLAR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 348 GMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIAL 427
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
410 420
....*....|....*....|....*..
gi 120586734 428 EPTHTREHLLIMLHLIPIVLLILKPEL 454
Cdd:MTH00205 419 LAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
54-458 |
1.38e-86 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 273.11 E-value: 1.38e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 54 NLYLATDPLSTPLLVLTCWLLPLMILASQNhlspEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLII 133
Cdd:COG1008 75 SYHLGVDGISLPLVLLTALLTPLAILASWN----EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 134 ITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLM--QNDSGTLSMFTLQYMQ-PMHLLTWgdklWWAACLLAFLVKMPL 210
Cdd:COG1008 151 IGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAPlPLTAQLL----LFLAFFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 211 YGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPL-TKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 290 SSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLA 369
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 370 LPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVLLI 449
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLG 465
|
....*....
gi 120586734 450 LKPELMWGW 458
Cdd:COG1008 466 LYPQPLLDL 474
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
54-455 |
1.79e-80 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 257.82 E-value: 1.79e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 54 NLYLATDPLSTPLLVLTCWLLPLMILASQNHLSpeplNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLII 133
Cdd:PRK05846 75 SYHLGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 134 ITRWGnQTERLNAGTYFLFYTLAGSLPLLVALLLM----QNDSGTLSMFTLQYMQ-PMHLLTWgdkLWWAaCLLAFLVKM 208
Cdd:PRK05846 151 IGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPlPPGVQYW---LFLA-FFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPL-TKELAYPFIVLALWGIIMTGSICLRQTDLKSLI 287
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 288 AYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLAN 367
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 368 LALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVL 447
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLL 465
|
....*...
gi 120586734 448 LILKPELM 455
Cdd:PRK05846 466 LGVYPKPL 473
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-458 |
6.31e-77 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 247.93 E-value: 6.31e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQnhlsPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 137 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLMQNDSGtlSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLW 216
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGG--GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 217 LPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDP-LTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 296 GLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 376 LMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLP-SHIIALEPTHTREHLLIMLHLIPIVLLILKPEL 454
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNP 465
|
....
gi 120586734 455 MWGW 458
Cdd:TIGR01972 466 LLDL 469
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-452 |
3.33e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 235.73 E-value: 3.33e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 53 SNLYLATDPLSTPLLVLTCWLLPLMILASQN---HLSPEplnrqraYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLP 129
Cdd:MTH00204 75 GPLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 130 TLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQ-PMHLLTWGdklwWAACLLAFLVKM 208
Cdd:MTH00204 148 MFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlPLSIQKWL----LVGFFLSLAVKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIV-LALWGIIMTGSICLRQTDLKSLI 287
Cdd:MTH00204 224 PQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 288 AYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLAN 367
Cdd:MTH00204 304 AYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 368 LALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVL 447
Cdd:MTH00204 384 MGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFL 463
|
....*
gi 120586734 448 LILKP 452
Cdd:MTH00204 464 LGIVP 468
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
9.26e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 224.16 E-value: 9.26e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 42 LKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILASQNhlSPEPLNRQraYISLLVSLQTFLVLAFGATEIIMFYI 121
Cdd:MTH00217 61 FEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWN--SIKFLIKE--FLLCLLVIEILLMGVFTILDLVGFYI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 122 MFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQPMHLLtwgDKLWWAACL 201
Cdd:MTH00217 137 LFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL---QYFIFLGFF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 202 LAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFI-VLALWGIIMTGSICLRQ 280
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 281 TDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWW 360
Cdd:MTH00217 294 VDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 120586734 361 FMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLF 412
Cdd:MTH00217 374 LLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
1.03e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.94 E-value: 1.03e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 113 ATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQPMHLLTWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 193 DKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 273 TGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLA-NTSYERTHSRTMLLARGMQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 120586734 352 ILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-411 |
6.36e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 212.09 E-value: 6.36e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 55 LYLATDPLSTPLLVLTCWLLPLMILASQNHLSpeplNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIII 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTL---QYMQPMHLLTWgdklWWAACLLAFLVKMPLY 211
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQTQKW----IFLGIFLAMAVKIPIF 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPL-TKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 291 SVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLAL 370
Cdd:MTH00226 328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 120586734 371 PPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYL 411
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-455 |
5.62e-51 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 180.23 E-value: 5.62e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQNhlspePLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLM--QNDSGTLSMFTL---QYMQPMHLLTWgdklwwAACLLAFLVKMPLY 211
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAELgakSYPLALELLLY------AGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTK-ELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 291 SVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLAL 370
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLAL 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 371 PPLPNLMGELMI---ITSMFNWSYW----TLILTGLGTLITASYSL----YLFLMTQRGPLPSHIIaLEPTHTREHLLIM 439
Cdd:PRK12561 363 PGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLsmlrRVFYGPRSELLPALAV-VEDAKPRELFIAL 441
|
410
....*....|....*.
gi 120586734 440 LHLIPIVLLILKPELM 455
Cdd:PRK12561 442 SLLVPIIGIGFYPKLA 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-411 |
2.89e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.38 E-value: 2.89e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 106 FLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLlmqndsgtLSMFTLQYMQP 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 186 MHLLTWGDKLwwaACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLtkeLAYPFIVL 265
Cdd:MTH00094 146 DFFLSWEMFF---ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 266 ALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLL 345
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 120586734 346 ARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYL 411
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFL 365
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
4.97e-44 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 159.54 E-value: 4.97e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLS-PAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNL---------YLATDPLSTPLLVLT 70
Cdd:COG0651 6 ILPVLLPLLAAALLLLLGrRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALggwpapfgiVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 71 CWLLPLMILASQNHLSPEPlnRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQtERLNAGTYF 150
Cdd:COG0651 86 ALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKY 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 151 LFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQPmHLLTWGDKLWWAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSM 230
Cdd:COG0651 163 LILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 231 ILAAVLLKLGGYGMMRMMVVLDP--LTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPW 308
Cdd:COG0651 242 LLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 309 GFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFN 388
Cdd:COG0651 322 GLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALE 401
|
410 420
....*....|....*....|....*....
gi 120586734 389 -WSYWTLILTGLGTLITASYSLYLFLMTQ 416
Cdd:COG0651 402 aGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-455 |
2.91e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 159.49 E-value: 2.91e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQnhlsPEPLnRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITR 136
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAW----PVTF-KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSmFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGVHLW 216
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPT-FDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 217 LPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYP-FIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHM 295
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 296 GLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPN 375
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 376 LMGELMIITSMFNWSYWTL-------ILTGLGTLITASYSLYL----FLMTQRGPLPSH--IIALEPthtREHLLIMLHL 442
Cdd:PRK02546 396 FVAELMVFVGFATSDAYTLpfrvvvvFLAAVGVILTPIYLLSMlreiFFGPENKELVSHekLVDAEP---REVFIIACLL 472
|
410
....*....|...
gi 120586734 443 IPIVLLILKPELM 455
Cdd:PRK02546 473 VPIIGIGLYPKLV 485
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-458 |
1.12e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 149.08 E-value: 1.12e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 54 NLYLATDPLSTPLLVLTCWLLPLMILASQnhlspEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLII 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 134 ITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGtLSMFTLQYMQPMHLLTWGDKLWWAACLLAFLVKMPLYGV 213
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSG-ASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFivLALWGII--MTGSIC-LRQTDLKSLIAYS 290
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 291 SVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGM---QMILPLMTTWWFMASLAN 367
Cdd:PRK06473 303 SIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMAS 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 368 LALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTREHLLIMLHLIPIVL 447
Cdd:PRK06473 383 AGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVV 462
|
410
....*....|.
gi 120586734 448 LILKPELMWGW 458
Cdd:PRK06473 463 LGIQPSWLVRW 473
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-409 |
9.84e-39 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 146.63 E-value: 9.84e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQnhlspePLNRQ-RAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLMQ---NDSGTLSMFTLQYMQ-PMHLltwgDKLWWAACLLAFLVKMPLY 211
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSyPVAL----EILFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVL-ALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 291 SVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERThsRTMLLAR--GMQMILPLMTTWWFMASLANL 368
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 120586734 369 ALPPLPNLMGELM----IITSMfNWSYWTLIL----TGLGTLITASYSL 409
Cdd:CHL00011 387 ALPGMSGFVAELIvffgIITSQ-KYLLMPKILitfvMAIGMILTPIYLL 434
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
9.22e-31 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 114.54 E-value: 9.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 1 MLKILIPTLMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 120586734 81 SQNHLSPEPLNRQRAYISLLVSLQTFLVLA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-458 |
6.32e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 119.05 E-value: 6.32e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 41 WLKWSSETGWSSSnlyLATDPLSTPLLVLTCWLLPLMILASQnhlspEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 121 IMFEATLLPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSmFTLQYMQPMHLLTWGDKLWWAAC 200
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTS-FDYDAISTQNLSLNTQLILLTGL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPfiVLALWGII--MTGS-IC 277
Cdd:PRK07363 212 LLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 278 LRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARG-MQMI--LP 354
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGlMNPIrgLP 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 355 LMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHIIALEPTHTRE 434
Cdd:PRK07363 370 LTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSE 449
|
410 420
....*....|....*....|....
gi 120586734 435 HLLIMLHLIPIVLLILKPELMWGW 458
Cdd:PRK07363 450 KIPALILTALILFLGVQPNWLVRW 473
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-450 |
7.25e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 110.06 E-value: 7.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQNHLSPEPLNRQraYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEW--YYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTL----------QYMQPMHLLTWGDKLWWAACLLAFLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsfpLTGGLAGNPPLALGVALALALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 207 KMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMM-------VVLDPLTKELAYPFIVLALWGIIMTGSICLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 280 QTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 360 WFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGL-GTLITASYSLYLFLMTQRGPLPSHiialEPTHTREHLLI 438
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLiASAISLVGYFRAWYSLFFGKPKSG----EEVEHKESPSM 471
|
410
....*....|..
gi 120586734 439 MLHLIPIVLLIL 450
Cdd:PRK12667 472 SVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-450 |
1.75e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 108.81 E-value: 1.75e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 2 LKILIPtLMLFPTIWLSP----AKWLWTTSIAQSLIIALASLSWLKWSSET------GWSS-SNLYLATDPLSTPLLVLT 70
Cdd:PRK08375 8 LLVAVP-LLAAALIVLLPkrrrLRWALALLVAALTFALAISLLPQVLDGGViayvvgGWPPgIGIELRADSLSALFLLVT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 71 CWLLPLMILASQnhlsPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQtERLNAGTYF 150
Cdd:PRK08375 87 SILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 151 LFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQPmhlltwGDKLWWAA---CLLAFLVKMPLYGVHLWLPKAHVEAPIA 227
Cdd:PRK08375 162 LIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPLHTWLPRAYPAAPPV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 228 GSMILAAVLLKLGGYGMMRMM-VVLDPLTKE---LAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGIL 303
Cdd:PRK08375 236 VTALLSGLVTKVAVYALIRIYfTVFGGDFRFalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 304 IQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMII 383
Cdd:PRK08375 316 LLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLV 395
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 384 T-SMFNWSYWTLILTGLGTLITASYSLYLF--LMTQRGPLPSHIIALEPTHTRehllimlhLIPIVLLIL 450
Cdd:PRK08375 396 VgAVEAGQWLVLAVLLASSLLALLYFLRIWyrAFFGPPPPGSEAPKQEAPLGM--------LAPSLALAL 457
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-396 |
2.18e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 102.32 E-value: 2.18e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLD-PLTKELAYP-FIVLALWGIIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 279 RQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*...
gi 120586734 359 WWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLIL 396
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
73-382 |
9.22e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 82.74 E-value: 9.22e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 73 LLPLMILASQNHLSPEPLNRQRAYISLLVSLQTFLVLA-FGATEIIMFYIMFEATLLPTLIIITRwGNQTERLNAGTYFL 151
Cdd:PRK08668 76 MISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGvFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 152 FYTLaGSLPLLVALLLMQNDSGTLSMFTLQymQPMHLLTWGDKLWWAACLL--AFLVKMPLYGVHLWLPKAHVEAPIAGS 229
Cdd:PRK08668 155 LSAI-GAYAMLYAIFLIYAKTGTFDFADIS--QGLINDTSTGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 230 MILAAVLLKLGGYGMMRMMVVLdPLTK------------ELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGL 297
Cdd:PRK08668 232 AVLSGQLSKLGAYGFLLVLYVL-PGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 298 VAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLM 377
Cdd:PRK08668 311 ILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
....*
gi 120586734 378 GELMI 382
Cdd:PRK08668 391 SKWLI 395
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-411 |
7.72e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 79.61 E-value: 7.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 91 NRQRAYISLLVSLQTFLVLAFGATEIIMFYIMFEATLLPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 171 DSGTLSMFTLQYMQPMHLltwgdklwwAACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVV 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 251 LDPLTKELAYPFIVLALWGIImtgsICLRQTDLKSLIAYSSVGHMGLVAGGILIqtpwgfsgAIILMIAHGLASSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 331 ANTSYERTHS--RTMLLARGMQMILplmttwwFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYS 408
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWIPL-------TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAASFWKF 381
|
...
gi 120586734 409 LYL 411
Cdd:PRK07234 382 IFL 384
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
7.23e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.08 E-value: 7.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 202 LAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRmmVVLDPLTKELAYPFIVL------ALWGIIMTgs 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 276 icLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSG-----------AIILMIAHGLASSALFCLANTSYERTHSRTML 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 120586734 345 LARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-413 |
1.28e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 75.56 E-value: 1.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVL--DPLTKELAYPFIVLALWGIIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 279 RQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTsYERTHSRTMLLARGMQMILPLMTT 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 120586734 359 WWFMA-SLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLYLFL 413
Cdd:PRK08676 372 WGVILgSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
201-453 |
1.54e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 75.37 E-value: 1.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHlWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSI-CLR 279
Cdd:PRK12663 214 LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgALA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 280 QTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTW 359
Cdd:PRK12663 293 YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGAL 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 360 WFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITASYSLY-LFLMTQRGPLPSHIIALEPTHTREHLLI 438
Cdd:PRK12663 373 FLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFrIFFLAYWGDKDGEEVNFKPIPLYRKLPL 452
|
250
....*....|....*
gi 120586734 439 MLHLIPIVLLILKPE 453
Cdd:PRK12663 453 SILAVVVIAMGIAAE 467
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
57-450 |
1.78e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 72.31 E-value: 1.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 57 LATDPLSTPLLVLTCWLLPLMILASQNHLSP--------EPLNRQRAYISLLVSLQTFLVLAfgaTEIIMFYIMFEATLL 128
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehpvhEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 129 PTLIIITRWGNQTERLNAGTYFLFyTLAGSLPLLVALLLMQNDSGTLSMFTLQymqpmhLLTWGDKLW-WAACLLAFLVK 207
Cdd:PRK06525 148 CSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALS------GLHGSLKYLvFLGILFAAWGK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 208 MPLYGVHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSL 286
Cdd:PRK06525 221 SAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 287 IAYSSVGHMGLVAGGILIQ---TPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMA 363
Cdd:PRK06525 300 LAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVA 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 364 SLANLALPPLPNLMGELMIITSMFNWS--YWTLILTGLGTLITASYSLYLFLMTQRGPLPShiialEPTHTREHLLIMLH 441
Cdd:PRK06525 380 ALAITGVPPFNGFFSKFPIFAAGFELSveYWILLPAMVLLLIESVASFAWFLRWFGRVVFG-----EPSEAVADAAPLPG 454
|
....*....
gi 120586734 442 LIPIVLLIL 450
Cdd:PRK06525 455 SMKLVLIVL 463
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-450 |
1.06e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 70.18 E-value: 1.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRMMVVLDpLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 293 GHMGLVAGGILIQtpwGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLmtTWWFM--ASLANLAL 370
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPI--TAITFliGALSLAGI 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 371 PPLPNLMGELMIITSMF---NWSYWTLILTGLGTLITASYSLYLFLMTQRGPLPSHiialEPTHTREHLLIMlhLIPIVL 447
Cdd:COG1009 384 PPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK----TPKHPHESPWLM--TLPLVV 457
|
...
gi 120586734 448 LIL 450
Cdd:COG1009 458 LAV 460
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
198-411 |
2.28e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 68.64 E-value: 2.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 198 AACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLT--KELAYPFIVLALWGIIMTGS 275
Cdd:PRK08377 210 ALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 276 ICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPL 355
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPL 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 120586734 356 MTTWWFMASLANLALPPLPNLMGELMIITSMFNWSY-WTLILTGLGTLITASYSLYL 411
Cdd:PRK08377 370 TALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYtWPVALVLGASVVEAVYYFRL 426
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-459 |
2.45e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.60 E-value: 2.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 9 LMLFPTIWLSPAKWLWTTSIAQSLIIALASLSWLKWSSETGWSSSNLYLAtDPLSTPLLVLTCWLLPLMILASQNHLSPE 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVV-DGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 89 PLNRQRAYISLLVSLQTFLVLAfGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGT-YFLFYTLAgslpllvalll 167
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALS----------- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 168 mqndSGTL----SMF-----TLQYMQPMHLLTWGDK---LWWAACLL---AFLVKMPLYGVHLWLPKAHVEAPIAGSMIL 232
Cdd:COG1007 166 ----SGFLlygiSLLygatgSLNLAGIAAALAAGGAnspLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 233 AAVLlKLGGYGM-MR-MMVVLDPLTKELAYPFIVLALwgIIMT-GSIC-LRQTDLKSLIAYSSVGHMGLVAGGILIQTPW 308
Cdd:COG1007 242 ATAP-KIAAFAAlLRlLVEAFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 309 GFSGAIILMIAHGLASSALF-CLANTSYERTHSRTML----LARGMQMILPLMTTwwFMASLAnlALPPLPNLMGELMII 383
Cdd:COG1007 319 GVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEdlagLARRSPLLALAMTI--FLLSLA--GIPPTAGFFGKFYVF 394
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 384 TSMFNWSYWTLILTG-LGTLITASYSLYL-FLMTQRGPLPSHIIALEPTHTrehLLIMLHLIPIVLLILKPELMWGWC 459
Cdd:COG1007 395 SAAVEAGLYWLAVIAvLNSVISAYYYLRVvKAMYFDEPEEEAPISAPPGLR---VALVIAALLVLLLGIFPGPLLDLA 469
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
107-413 |
2.55e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 65.83 E-value: 2.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 107 LVLAfgaTEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLMQNDSGTLSMFTLqymqpM 186
Cdd:PRK12650 126 LVLA---DDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGI-----L 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 187 HLLTWGDKLWWAAcLLAFLVKMPLYG------VHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVL--DPLTKEL 258
Cdd:PRK12650 196 HSDVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 259 aypFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERT 338
Cdd:PRK12650 275 ---LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQA 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 339 HSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMF-----NWSYWTLILT-GLGTLITASYSLYLF 412
Cdd:PRK12650 352 GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSARLV 431
|
.
gi 120586734 413 L 413
Cdd:PRK12650 432 L 432
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-429 |
4.03e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.73 E-value: 4.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 119 FYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMFTLQYMQPMHLlTWGDKLWWA 198
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENP-TVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 199 ACLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGMMRMM-----VVLDPLTkeLAYPFIVLALWGIIM 272
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfsiygPAINLAT--VGWVIIILGCLTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 273 TGSICLRQTDLKSLIAYSSVGHMG---------LVAGGILIQTPWGF---SGAIILMIAHGLASSALFCLANTSYERTHS 340
Cdd:PRK08376 301 GVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGT 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 341 RTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGLGT-LITASYSLYLFLMTQRGP 419
Cdd:PRK08376 381 RNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFVKVFHTAFFGPP 460
|
330
....*....|
gi 120586734 420 LPSHIIALEP 429
Cdd:PRK08376 461 SEKVMNVKEP 470
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
6.38e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.22 E-value: 6.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 105 TFLVL------AFGATEIIMFYIMFEATLLPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLSMF 178
Cdd:PRK12665 116 TYLILvagvsnAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 179 TLQymQPMHLLTWGDKLWWAACLL-AFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPlTKE 257
Cdd:PRK12665 195 DLA--VRLDELPSGTRTALFAVLLvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 258 LAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYER 337
Cdd:PRK12665 272 LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 120586734 338 THSRTMLLARGMQMILPLMTTWWFMASLaNLA-LPPLPNLMGELMIITS-MFNWSYWTLILTGlGTLITASYSLY 410
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
1.07e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.78 E-value: 1.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRmmvvLDPLTKELAYPFIVLALWG---IIMTGSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 290 SSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 120586734 370 LPPLPNLMGELMIITSMFNWSYWTLILTGLGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-422 |
9.23e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.60 E-value: 9.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVV---LDPLTKELA--YPFIVLALWGIIMTGS 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFAefNWLIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 276 ICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 120586734 356 MTTWWFMASLANLALPPLPNLMGELMIITSMFNWS-YWTLILTGLGTLITASY-SLYLFLMTQRGPLPS 422
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLKILSSIYKPS 445
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
196-373 |
1.37e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 60.29 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 196 WWA--ACLLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRmmVVLDPL-TKELAYPFIVLALWG 269
Cdd:PRK06521 207 FWAslVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLgAPGWWWGVLVLALGA 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 270 IIMTGSI--CLRQTDLKSLIAYSSVGHMGLV-----------AGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYE 336
Cdd:PRK06521 285 ISAVLGVlyALAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLH 364
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 120586734 337 RTHSRTML----LARGMQMILPLMttwwFMASLANLALPPL 373
Cdd:PRK06521 365 ATGTRDMEklggLIRRMPWTAWAF----LIGCLAISALPPL 401
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-414 |
2.80e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 59.19 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFI-VLALWGIIMTGSICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 280 QTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMtTW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVL-GW 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 120586734 360 WFMASLANLA-LPPLPNLMGELMIITSMF-NWSYWTLILTGLGTLITASYSLYLFLM 414
Cdd:PRK07691 375 MFFIAALSLAgIPPLSGFYGKFFIVEGTFeAGFYVSGIIVLLSSLLVLYSVIKIFLK 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
84-452 |
2.84e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.38 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 84 HLSPEPLNRQRAYISLLVSLQTFLVLAFGATEIIMfYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLV 163
Cdd:PRK12646 101 YLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 164 ALLLMQNDSGTLSMftlqymqpMHLLTWGDKL----WWAACLLAFLV----KMPLYGVHLWLPKAhVEAPIAGSMIL-AA 234
Cdd:PRK12646 180 GFIMLYIMTGTNNI--------TEILGQADHIknhgLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSA 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 235 VLLKLGGYGMMRMMVVLDpLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVA-----GGILIQTPWG 309
Cdd:PRK12646 251 TMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQD 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 310 ----------FSGAIILMiAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGE 379
Cdd:PRK12646 330 aiasiyvfvlFAALFHLM-NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 380 LMIITSMFN---WSYWTLILTGLGTLI-------TASYSLYLFLMTQRGPLPSHIIalepTHTREHLLIMLHLIPIVLLI 449
Cdd:PRK12646 409 EMFLDALTQtgqLSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGKYDSKVF----TKKNIHEPWLFSLPSLILMV 484
|
...
gi 120586734 450 LKP 452
Cdd:PRK12646 485 LVP 487
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-397 |
4.66e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 4.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVV-----LDPLTKELAYPFIVLALWGIIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 276 ICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPL 355
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPK 375
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 120586734 356 MTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILT 397
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
208-388 |
4.88e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 55.22 E-value: 4.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 208 MPLYGvhlWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLI 287
Cdd:PRK08042 197 IPLHG---WVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 288 AYSSVGHMGLV-----AG--GILIQTP----WGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLM 356
Cdd:PRK08042 274 AYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180 190
....*....|....*....|....*....|..
gi 120586734 357 TTWWFMASLANLALPPLPNLMGELMIITSMFN 388
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
5.37e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 55.24 E-value: 5.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGMMRM-MVVLDPLTKELAYPFIVLALWGIIMT---G 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATlafG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 275 SI-CLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMIL 353
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLVERQRGAAADRLAVTPELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 120586734 354 PLMTTW-----------------WFMASLANLALPPLPNLMGELMIITSMFN-------WSYWTLIL-TGLGTLI 403
Cdd:PRK12666 374 LDEEEEeevgvaipatmallgllFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWALVLlSGLAALI 448
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-411 |
7.29e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 54.65 E-value: 7.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 233 AAVLLKLGGYGMMRMMVVLDPLTKELAY------PFIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQT 306
Cdd:PRK06277 234 SALLQTFSKFVLVALMLVIFKLFGGLSYfpsaqgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 307 PWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMllaRGMQMILPLMTTWWFMASLANLAL---PPLPNLMGELMII 383
Cdd:PRK06277 314 PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNL---RKLGGLLPVMPVVAFMVLCAKLAIsgvPPFNGFQSKLMLA 390
|
170 180 190
....*....|....*....|....*....|....*
gi 120586734 384 TSMFNWSYWTL----ILTGLGTLIT---ASYSLYL 411
Cdd:PRK06277 391 QAAMQANMPELaiimIIVSIGTFVSmmkAFYLIYL 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-456 |
1.94e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 53.03 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMV-VLDPLTKELAYPFIVLALWGIIMTGSICLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 280 QTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALF-CLANT-SYERTHSRTMLLARGMQMILPLM- 356
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILa 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 357 -TTWWFMASLAnlALPPLPNLMGELMIITSMFNWSYWTL-ILTGLGTLITASYSLYLfLMTQRGPLPSHIIALEPTHTRE 434
Cdd:TIGR01770 370 iLILIFMFSLA--GIPPLAGFFGKFYVFFALLKSGLYWLaVIAVLTSVIGAFYYLRV-VKVMYFDKPERRIPSNPQSKAQ 446
|
250 260
....*....|....*....|..
gi 120586734 435 HLLIMLHLIPIVLLILKPELMW 456
Cdd:TIGR01770 447 SLLLSISALFILFLGLFPSLIL 468
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-409 |
3.27e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.52 E-value: 3.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAHVEAPIAGSMILAAVLlKLGGYGM-MRMMVV-LDPLTKELAYPFIVLALWGIIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 292 VGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTML-----LARGMQMILPLMTTwwFMASLA 366
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESIsdfagLSKRSPLLAAVMTI--FMLSLA 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 120586734 367 nlALPPLPNLMGELMIITSMFNWSYWTLILTG-LGTLITASYSL 409
Cdd:PRK05777 381 --GIPPTAGFWGKFYVFEAAVEAGLWWLAVIGvLNSAIGAFYYL 422
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
6.69e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 51.46 E-value: 6.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 97 ISLLVSLqTFLVLAFGATEIIMFYIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSGTLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 177 MFTLQYMqpmhlltwGDKLWWAACLLA--FLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRMMVVLDPL 254
Cdd:MTH00062 154 FSDWGSD--------DSVSLIVYYVLSfmFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 255 TKELAYPFIVLALWGIIMTGSICLrqtDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTS 334
Cdd:MTH00062 226 SFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCF 302
|
250
....*....|.
gi 120586734 335 YERTHSRTMLL 345
Cdd:MTH00062 303 YEVSGSRNWVL 313
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-411 |
9.82e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 48.29 E-value: 9.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 94 RAYISLLVSLQTFLVLAFGATEIIMFyIMFEATLLPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLMQNDSG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 174 TLSMFTLQYMQPMHLLTWGDKLWWAACLLAFL------VKMPLYgvhLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 247 MmvvlDPLTKELAYPFIVLALWGII---MTGSICLRQTDLKSLIAYSSV---GHMGLVAGGILIQTP-WGFSGAIILMIA 319
Cdd:PRK12649 267 I----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTIsqlAYLMTMYGYTTYHEPgLGVAAATFHLLN 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 320 HGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSM--------FNWSY 391
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvemgaligGPFTI 422
|
330 340
....*....|....*....|
gi 120586734 392 WTLILTGLGTLITASYSLYL 411
Cdd:PRK12649 423 IIPAVAVLGGVFTFAYSIKL 442
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-406 |
1.33e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 202 LAFLVKMPLYGVHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGMMRM-MVVLDPLTKELAYPFIVLALWGIIMTGSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMtILTQTIPIGYFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 279 RQTDLKSLIAYSSVGHMG--LVAGGILIQTPWGFS--------GAIILMIAHGLASSALFCLANTSYERTHSRTMLLARG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR 325
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 349 MQMILPLMTTwwfmASLAnlALPPLPNLMGELMIITSMFNWSYWTLILTGLGTLITAS 406
Cdd:PRK06459 326 WIELGLTLLA----SSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
2.92e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.95 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMMRMMVvldpLTKELAYPFIVLALWGIIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 281 TDLKSLIAYSSVGHMGLVAGGILIqtpwgfsGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILH-------GSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIIS 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 120586734 361 FMASLAnlALPPLPNLMGELMIITSMFNWSYWTLILTG-LGTLITASYSLYLFLM 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
3.37e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.09 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 197 WAACLLAFLVKM---------PLygvHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMMRMmvvlDPLTKELAYPFIVLA 266
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTPISaLIHAATMVAAGVFLVARM----YPVFEQFPAVMTVIA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 267 LWGII---MTGSICLRQTDLKSLIAYSSVGHMG--LVAGGIliqtpWGFSGAIILMIAHGLASSALFcLANTS------- 334
Cdd:PRK07376 296 WTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLF-LGSGSvihgmee 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 335 ---YERTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNwSYWTLILTGLGTL-ITASYSLY 410
Cdd:PRK07376 370 vvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTAFYMFR 448
|
....*...
gi 120586734 411 LFLMTQRG 418
Cdd:PRK07376 449 MYFLTFEG 456
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-442 |
5.41e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.07 E-value: 5.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 201 LLAFLVKMPLYGVHLWLPkaHVEAPIAGSMILAavllkLGGYGMMRMMVVLDPLTKELAYPFIV-LALWGIIMTGSICLR 279
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSISWTLCLI-----LSTWQKIAPLSILFFFTSHNILPMMTsMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 280 QTDLKSLIAYSSVGHMGLvaggILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARgmqmiLPLMTTW 359
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGW----MTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISS-----MSQTTSM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 360 WFMASLANLA-LPPLPNLMGELMIITSMFNWSYWTLILTGL-GTLITASYslYLFLMTQRGPLPSHIIALEPTHTREHLL 437
Cdd:MTH00011 239 SLFIMLLSLGgLPPFTGFMPKLMAIETLTSNSMILILLVLIvGSLMNLFY--YLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
....*
gi 120586734 438 IMLHL 442
Cdd:MTH00011 317 ILISM 321
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-410 |
5.85e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.60 E-value: 5.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRMMvvldPLTKELA---YPFIVLALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPvwrPTVLVLGLATMLLGGWRALRQHDLKLILAY 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 290 SSVGHMGLVAGGILIQTPWGFSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLMTTWWFMASLANLA 369
Cdd:PRK12644 298 GTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAG 377
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 120586734 370 LPPLPNLMGELMIITSMFN------WSYWTLILTGLGTLITASYSLY 410
Cdd:PRK12644 378 LPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
1.32e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.22 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 212 GVHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMMRMMVVLDPLTKELAYPFIVLALwGIIMTGSICLRQTDLKSLIAYS 290
Cdd:MTH00020 228 GLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 291 SVGHMG--LVAGGIliqtpWGFSGAIILMIAHGLASSALFCLANTS-YERTHSRTMLLARGMQMILPLMTTWWFMASLAN 367
Cdd:MTH00020 306 TCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSL 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 120586734 368 LALPPLPNLMGELMIITSMFNWSYWTLI--LTGLGTLITASYSLYLFLMT 415
Cdd:MTH00020 381 MGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
262-413 |
1.55e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.80 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 262 FIVLALWGIIMTGSICLRQTDLKSLIAYSSVGHMGLVAGGILIQTPWGFSGAIILMIAH------GLASSALFCLantsy 335
Cdd:PRK02504 279 FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYlfmnlgAFACVILFSL----- 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 120586734 336 eRTHSRTMLLARGMQMILPLMTTWWFMASLANLALPPLPNLMGELMIITSMFNWSYWTLILTGlgtLITASYSLYLFL 413
Cdd:PRK02504 354 -RTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVG---LVTSVISIYYYI 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-450 |
2.29e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 40.68 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRMMvvldPLTKELAYPFIVLALWGIIMT--GSI-CLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITLfwGSLnAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 290 SSVGHMGLV-----AGGILIQTPWG--------FSGAIILMIAHGLASSALFCLANTSYERTHSRTMLLARGMQMILPLM 356
Cdd:PRK12645 305 STVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 120586734 357 TTWWFMASLANLALPPLPNLMGELMIITSMFN-----------WSYWTLILTGLGTLITASYSLYLFLMTQRGPL-PSHI 424
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFESMLNateanlfsldtWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYkPEQL 464
|
250 260
....*....|....*....|....*.
gi 120586734 425 ialePTHTREHLLIMLhLIPIVLLIL 450
Cdd:PRK12645 465 ----PKKAHEAPIGML-ISPIILASL 485
|
|
| |
