|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
2-116 |
4.75e-63 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 187.45 E-value: 4.75e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 2 INLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQ 81
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 108793316 82 LPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE 116
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
2-116 |
3.14e-47 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 147.37 E-value: 3.14e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 2 INLLIT-LIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWAL 80
Cdd:MTH00136 1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 108793316 81 QLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
4-116 |
7.66e-46 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 143.60 E-value: 7.66e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 4 LLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQLP 83
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 108793316 84 HPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE 116
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
1.40e-44 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 140.40 E-value: 1.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 3 NLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQL 82
Cdd:MTH00113 2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81
|
90 100 110
....*....|....*....|....*....|...
gi 108793316 83 PHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWT 115
Cdd:MTH00113 82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
6.49e-38 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 123.94 E-value: 6.49e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWAL 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 108793316 81 QLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
7.99e-32 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 108.06 E-value: 7.99e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWAL 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|....
gi 108793316 81 QLPHPNMTLVLSycLIVLLTAGLAYEWSQKGLEW 114
Cdd:MTH00203 81 QLSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
19-113 |
9.17e-28 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 97.11 E-value: 9.17e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 19 ILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQLPH-PNMTLVLSYCLIV 97
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIA 78
|
90
....*....|....*.
gi 108793316 98 LLTAGLAYEWSQKGLE 113
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
7.96e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 93.00 E-value: 7.96e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLY-LEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWA 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 108793316 80 LQLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-114 |
1.25e-24 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 89.84 E-value: 1.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 3 NLLITLIVNFMLSTIIILIAFWL-PQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQ 81
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 108793316 82 LPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEW 114
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
4-114 |
5.30e-22 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 83.25 E-value: 5.30e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 4 LLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQLP 83
Cdd:COG0838 8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85
|
90 100 110
....*....|....*....|....*....|..
gi 108793316 84 HPNMTLVLSYCL-IVLLTAGLAYEWSQKGLEW 114
Cdd:COG0838 86 ELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
5.34e-22 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 83.50 E-value: 5.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLP-QLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWA 79
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*
gi 108793316 80 LQLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEW 114
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
1.84e-20 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 79.37 E-value: 1.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWAL 80
Cdd:MTH00055 5 FLGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCV 82
|
90 100 110
....*....|....*....|....*....|....*
gi 108793316 81 QLPHPNMTLV-LSYCLIVLLTAGLAYEWSQKGLEW 114
Cdd:MTH00055 83 VYNQIGLFGFwVMYLFLIILTIGLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
9.70e-20 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 77.59 E-value: 9.70e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLY-LEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWA 79
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTAdREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 108793316 80 LQLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWT 115
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
4-115 |
2.57e-19 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 76.44 E-value: 2.57e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 4 LLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQLP 83
Cdd:PRK06602 11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFR 88
|
90 100 110
....*....|....*....|....*....|...
gi 108793316 84 HPNMT-LVLSYCLIVLLTAGLAYEWSQKGLEWT 115
Cdd:PRK06602 89 EIGWLgFVEAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
2-114 |
7.47e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 75.10 E-value: 7.47e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 2 INLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQ 81
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*..
gi 108793316 82 LphpNMTLVLSYCLIVL----LTAGLAYEWSQKGLEW 114
Cdd:MTH00018 79 Y---NQIAPFGFWTMVGflfiLTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
33-114 |
3.19e-17 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 71.50 E-value: 3.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 33 EKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQLPHPNM-TLVLSYCLIVLLTAGLAYEWSQKG 111
Cdd:MTH00030 42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKGG 119
|
...
gi 108793316 112 LEW 114
Cdd:MTH00030 120 LEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
34-115 |
9.29e-10 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 51.98 E-value: 9.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 34 KSSPYECGFDPLGSARLP--FSLKFFLVAITFLLFDLEIALLLslPWALQLPH-PNMTLVLSYCLIVLLTAGLAYEWSQK 110
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLY--PWAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114
|
....*
gi 108793316 111 GLEWT 115
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
33-114 |
2.52e-08 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 48.20 E-value: 2.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 33 EKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLslPWALQLPHPNM-TLVLSYCLIVLLTAGLAYEWSQKG 111
Cdd:PRK07756 41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLY--PWAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118
|
...
gi 108793316 112 LEW 114
Cdd:PRK07756 119 LQW 121
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
12-115 |
4.59e-08 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 47.67 E-value: 4.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 12 FMLSTIIILIAFWLPQLYLYL----EKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLlsLPWALQLPHPNM 87
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPIskgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*....
gi 108793316 88 TLVLSYCLIVL-LTAGLAYEWSQKGLEWT 115
Cdd:CHL00022 92 SAFIEALIFVLiLIVGLVYAWRKGALEWS 120
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
5.83e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 44.50 E-value: 5.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 1 MINLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLpwal 80
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---- 76
|
90 100 110
....*....|....*....|....*....|....*
gi 108793316 81 qLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWT 115
Cdd:MTH00092 77 -LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
34-114 |
1.02e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 44.27 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793316 34 KSSPYECGFDPLGSARlPFSLKFFLVAITFLLFDLEIALLlsLPWALQLPHPNMTLVLSYCL-IVLLTAGLAYEWSQKGL 112
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFGLIEMLLfIVLLTIGFIYAWKKGAL 123
|
..
gi 108793316 113 EW 114
Cdd:PRK08489 124 EW 125
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-77 |
9.10e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 36.03 E-value: 9.10e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 108793316 36 SPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLP 77
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
| PLN00101 |
PLN00101 |
Photosystem I light-harvesting complex type 4 protein; Provisional |
24-60 |
5.64e-03 |
|
Photosystem I light-harvesting complex type 4 protein; Provisional
Pssm-ID: 215055 [Multi-domain] Cd Length: 250 Bit Score: 34.89 E-value: 5.64e-03
10 20 30
....*....|....*....|....*....|....*....
gi 108793316 24 WLPQLY--LYLEKSSPYECGFDPLGSARLPFSLKFFLVA 60
Cdd:PLN00101 56 WLPGLAspGYLNGSLPGDNGFDPLGLAEDPENLKWFVQA 94
|
|
|