|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
0e+00 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 545.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPFILITLGLTS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLGLTS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPALT 240
Cdd:MTH00135 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 241 SLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSSTQ 320
Cdd:MTH00135 241 ALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQ 320
|
330 340
....*....|....*....|....*..
gi 77020020 321 SNLPLALSTTTSILLLPLAPAAMALFT 347
Cdd:MTH00135 321 LTLPLAISTTATLMLLPLTPAILALLT 347
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.44e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 393.52 E-value: 3.44e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPA-DPFILITLGLT 159
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLlNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPAL 239
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 240 TSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLsST 319
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRF-KN 319
|
330 340
....*....|....*....|....*..
gi 77020020 320 QSNLPLALSTTTSILLLPLAPAAMALF 346
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.75e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 344.50 E-value: 6.75e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPA-DPFILITLGLT 159
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSlNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPAL 239
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 240 TSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSST 319
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*..
gi 77020020 320 QSNLpLALSTTTSILLLPLAPAAMALF 346
Cdd:MTH00112 321 KNTL-TATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.27e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 341.44 E-value: 1.27e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPA-DPFILITLGLT 159
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSiNPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPAL 239
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 240 TSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSST 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 77020020 320 QSNLPLALSTTTSILLLPLAPAAMALF 346
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
2.56e-105 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 312.67 E-value: 2.56e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPA-DPFILITLGLT 159
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPAlNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPAL 239
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 240 TSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSST 319
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*...
gi 77020020 320 qSNLPLALSTTTSILLLPLAPAAMALFT 347
Cdd:MTH00200 321 -SNLLVGLLLLLSILGLPLTPQLLFLFF 347
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-340 |
7.47e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 7.47e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQI-QPADPFILITLGLT 159
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPAL 239
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 240 TSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSST 319
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|.
gi 77020020 320 QSNLPLALSTTTSILLLPLAP 340
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLL 341
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-338 |
9.37e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 174.63 E-value: 9.37e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 1 MNPYVLITLLFgLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWL 80
Cdd:MTH00160 3 MNSSKLLFLST-LIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 81 TGqweiqqMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPadPFILITLGLTS 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN--NNFIIIIIILS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPALT 240
Cdd:MTH00160 154 AIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 241 SLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNatgttPWRLSSTQ 320
Cdd:MTH00160 234 FLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKN-----KWNLKKKK 308
|
330
....*....|....*...
gi 77020020 321 SNLPLALSTTTSILLLPL 338
Cdd:MTH00160 309 NKFSLILNFLSFISLFGL 326
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-318 |
5.89e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 159.28 E-value: 5.89e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 10 LFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIqqm 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS--- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 90 thpfpTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADP--FILITLGLTSTLVGGWG 167
Cdd:MTH00144 87 -----MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 168 GLNQTQLRKILAYSSIAHLGWMMLILQFSPtiTLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPALTSLTPLIL 247
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGS--WLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISL 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 77020020 248 LSLGG-LPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAMALTLSPNNATGTTPWRLSS 318
Cdd:MTH00144 240 LLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSS 311
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
15-298 |
4.00e-40 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 144.15 E-value: 4.00e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 15 LGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTnawltgQWEIQQMTHPFP 94
Cdd:MTH00011 17 LGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLKNIT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 95 TTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPFILIT-LGLTSTLVGGWGGLNQTQ 173
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTsMAAMSALAGGLGGMNQTQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 174 LRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPALTSLTPLILLSLGGL 253
Cdd:MTH00011 171 LRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGL 250
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 77020020 254 PPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYA 298
Cdd:MTH00011 251 PPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-338 |
5.64e-35 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 130.18 E-value: 5.64e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 9 LLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLF---ASTTNAWLTgqwe 85
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMggsLSFSNLYLS---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 86 iqqmthPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQpADPFILITLGLTSTLVGG 165
Cdd:MTH00197 79 ------LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNS-SSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 166 WGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITLLTLITYLLMTTSTFLVFKLNKATNIATLAISWTKTPALTSLTPL 245
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 246 ILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRLSYAmalTLSPNNATGTTPWRLSSTQSNLPL 325
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYK---SLILSNWMINFLMKINLLYSGLFI 308
|
330
....*....|...
gi 77020020 326 ALSTTTSILLLPL 338
Cdd:MTH00197 309 LLMMMLPLLMIFT 321
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-191 |
1.09e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 94.33 E-value: 1.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 15 LGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHP-RAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQ------ 87
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSyinlvl 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 88 -------QMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPFILItLGLTS 160
Cdd:MTH00196 84 nsgqsfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLI-GGLFS 162
|
170 180 190
....*....|....*....|....*....|.
gi 77020020 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLW 193
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-267 |
2.12e-20 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 89.68 E-value: 2.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 23 SSHWLLAWMGLEINTLAIIPLMT-QHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQQ------MTHPFPT 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDElskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 96 TM-----IILALALKVGLAPMHSWLPEVLQGLSLTTGLIL-STWQKLAPFAL---LLQIQPADPF---ILITLGLTSTLV 163
Cdd:pfam00361 81 LLllfllILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLirrSLLYLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 164 GGWGGLNQTQLRKILAYSSIAHLGWMMLIL----QFSPTITLLTLITYLLMTTSTFLVFKL-----NKATNIATLAISWT 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 77020020 235 KTPALTSLTPLILLSLGGLPPLTGFMPKWLILQ 267
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-191 |
7.74e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 90.08 E-value: 7.74e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 13 LGLGTTITFTSSHWLLAWMGLEINTLAI-IPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQQ--- 88
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGins 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 89 -MTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPFILITLGLtSTLVGGWG 167
Cdd:MTH00199 186 iLTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVL-SIIYGAIG 264
|
170 180
....*....|....*....|....
gi 77020020 168 GLNQTQLRKILAYSSIAHLGWMML 191
Cdd:MTH00199 265 ALNQTKIKRLLAYSGIGHMGFILF 288
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-336 |
4.42e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 69.98 E-value: 4.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 7 ITLLFGLgLGTTITFTSSHWLLAWMGLEINTLAIIPLMT-QHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWE 85
Cdd:TIGR01770 106 ILLLFAL-LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 86 IQQMTHPFPTTM------------IILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPF-- 151
Cdd:TIGR01770 185 FEDLLLFLSNGMlnisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFgf 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 152 ------ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQFSPTITL----------LTLITYLLMTTSTF 215
Cdd:TIGR01770 265 seawqiFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkavlfyifiyALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 216 LVFKLNKATNIATLAISWTKTPALTSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFYLRL 295
Cdd:TIGR01770 345 RSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 77020020 296 SYAMALTlSPNNATGTTPWRLSstqSNLPLALSTTTSILLL 336
Cdd:TIGR01770 425 VKVMYFD-KPERRIPSNPQSKA---QSLLLSISALFILFLG 461
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-299 |
4.61e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 69.76 E-value: 4.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 4 YVLitLLFGLgLGTTITFTSSHWLLAWMGLEINTLAIIPL-MTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTG 82
Cdd:COG1007 105 YAL--LLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLvAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 83 QWEIQQMTHPFPTT------------MIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQI----- 145
Cdd:COG1007 182 SLNLAGIAAALAAGganspllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlveaf 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 146 QPADPF---ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILQ-FSPTITLLTLITYLLMTTSTFLVF--- 218
Cdd:COG1007 262 PGLAADwqlLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAaGTPLGVSAALFYLLAYLFMNLGAFavi 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 219 -----KLNKATNIATLAISWTKTPALT--------SLT--PlillslgglpPLTGFMPKWLILQELTKQDLSTLATLTAL 283
Cdd:COG1007 342 lllsrKGGEAEEIEDLAGLARRSPLLAlamtifllSLAgiP----------PTAGFFGKFYVFSAAVEAGLYWLAVIAVL 411
|
330
....*....|....*.
gi 77020020 284 TALLSLFFYLRLSYAM 299
Cdd:COG1007 412 NSVISAYYYLRVVKAM 427
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-191 |
4.87e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.81 E-value: 4.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 9 LLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAV---------EATTKYFLTQATAAAMLLFASTTNAW 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 80 LTGQ--------------WEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQI 145
Cdd:MTH00198 273 FTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL 352
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 77020020 146 QPADPfILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:MTH00198 353 VITSK-LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILI 397
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
290-340 |
3.74e-11 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 57.65 E-value: 3.74e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 77020020 290 FFYLRLSYAMALTLSPNNATGTTPWRLSSTQSNLPLALSTTTSILLLPLAP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-299 |
4.92e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.69 E-value: 4.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 4 YVLItlLFGLgLGTTITFTSSHWLLAWMGLEINTLAIIPL-MTQHHHPRAVEATTKYFLTQATAAAMLLF--------AS 74
Cdd:PRK05777 106 YLLV--LFAL-LGMMVMVSANDLLTLFLGLELLSLPLYALaALRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 75 TTN----AWLTGQWEIQQMTHPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQI----- 145
Cdd:PRK05777 183 SLSfagiAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvaf 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 146 QPADPF---ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML-ILQFSPTITLLTLITYLLMTTSTFLVF--- 218
Cdd:PRK05777 263 GGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVgLAAGTAEGYSAVLFYLLAYLFMTLGAFgvi 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 219 -----KLNKATNIATLA-ISWTKtPALTSLTPLILLSLGGLPPLTGFMPKWLILQELTKQDLSTLATLTALTALLSLFFY 292
Cdd:PRK05777 343 sllrrKGGEAESISDFAgLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYY 421
|
....*..
gi 77020020 293 LRLSYAM 299
Cdd:PRK05777 422 LRVIKLM 428
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
8-267 |
6.47e-10 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 60.16 E-value: 6.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 8 TLLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQ 87
Cdd:COG0651 111 PLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 88 QMTHPFPT----------TMIILALALKVGLAPMHSWLPE-----------VLQGLSLTTGL--ILSTWQKLAPFALLLQ 144
Cdd:COG0651 191 DLAARLAEldpglllaafALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALF 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 145 IQPadpfILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMMLILqfsptitlltlITYLLMTTSTFLVFKLNKAT 224
Cdd:COG0651 271 LGT----LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGL-----------GLGTPLGLAGALFHLLNHAL 335
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 77020020 225 NIATL------AISWTKTPALTSLTPLILLSLGGLPPLT-------------GFMPKWLILQ 267
Cdd:COG0651 336 AKALLflaagaIERATGTRDLDKLGGLGKRMPLTAAAFLigalalaglpplsGFVSKWLLLQ 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-191 |
6.85e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 53.93 E-value: 6.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 49 HPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQW--EIQQ-MTHPFPTTM-------IILALALKVGLAPMHSWLPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAElAAAPLPLTAqlllflaFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 119 LQGLSLTTGLILS-TWQKLAPFALL---LQIQP--ADPF--ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMM 190
Cdd:COG1008 236 HVEAPTAGSVLLAgVLLKMGGYGLLrfaLPLFPeaSAYFapLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
.
gi 77020020 191 L 191
Cdd:COG1008 316 L 316
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-191 |
1.61e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.79 E-value: 1.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 33 LEINTLAIIPLMTQHHH-PRAVEATTKYFLTQATAAAMLLFASttnAWLTGQWEIQQMTH--------PFPTTMIILA-- 101
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYlavkmsenPTVVAKIALAlf 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 102 ---LALKVGLAPMHSWLPEVLQGL--SLTTGLILSTWQKLAPFALLL------QIQPAD-PFILITLGLTSTLVGGWGGL 169
Cdd:PRK08376 227 iagLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALARVLfsiygpAINLATvGWVIIILGCLTMFVGVAMAV 306
|
170 180
....*....|....*....|..
gi 77020020 170 NQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLL 328
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-191 |
2.14e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.24 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 20 TFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFL------TQATAAAMLLFAS----TTNAWLTGQW-EIQQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANaatvMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 89 MTHPFPTTMIILALAL-------KVGLAPMHSWLPE-----------VLQGLSLTTGLILstwqkLAPFALLLQIQPADP 150
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA-----VLRYYILIDAAIGSD 278
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 77020020 151 F---ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK06458 279 FpgrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-191 |
2.43e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 52.25 E-value: 2.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 50 PRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQ-WEIQQ-MTHPFPTTM-------IILALALKVGLAPMHSWLPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLElLNLPLPFGVqtwlflaFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 77020020 120 QGLSLTTGLILSTWQKLAPFALLLQIQPADP-------FILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-191 |
2.99e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 51.80 E-value: 2.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 33 LEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQQMTHPFP--------TTMIILALAL 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAenptvvtaFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 105 KVGLAPMHSWLPEVLQGLSLTTGLILS-TWQKLAPFALL----------LQIQPADPFILITLGLTSTLVGGWGGLNQTQ 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170
....*....|....*...
gi 77020020 174 LRKILAYSSIAHLGWMML 191
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILL 312
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-191 |
5.38e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.97 E-value: 5.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 50 PRAVEATTKYFL-TQATAAAML---LFASTTNAWLTGQWEIQQ-MTHPFPTTM-------IILALALKVGLAPMHSWLPE 117
Cdd:PRK05846 157 KNRIYAATKFFLyTLLGSLLMLvaiIYLVVVYYNATGTFDIADlLNLPLPPGVqywlflaFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 118 VLQ-----GLSLTTGLILstwqKLAPFALL---LQIQPADP----FILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAH 185
Cdd:PRK05846 237 AHVqaptaGSVLLAGILL----KMGAYGLLrfsLPLFPDAShefaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
....*.
gi 77020020 186 LGWMML 191
Cdd:PRK05846 313 MGFVTL 318
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-191 |
1.43e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 49.97 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 48 HHPRAVEATTKYFLTQATAAAMLLFA--------STTN-----AWLTGQWEIQQMT---HPFPTTMIILALAL-----KV 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfGTLNmadlsAKIRGLSFPLTGGlagNPPLALGVALALALwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 107 GLAPMHSWLPEV-----------LQGLSLTTG---------LILSTWQKLAPFALLLQiqpadpFILITLGLTSTLVGGW 166
Cdd:PRK12667 238 AIFPNHFWLPDAhpaapspvsamLSGLVVNVGayaiirflyTIFGISPSLIDFRAALS------PILIILGAVSAIIGAL 311
|
170 180
....*....|....*....|....*
gi 77020020 167 GGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFM 336
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-191 |
3.03e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.52 E-value: 3.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 17 TTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATA------AAMLLFASTTNAWLTG--QW-EIQ 87
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGtlNWtELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 88 QMTHPFPTTMIILA-------LALKVGLAPMHSWLPE-----------VLQGLSLTTGLilstWQKLAPFALLLQIQPAD 149
Cdd:PRK08676 195 AHASLLSPSVLGASflfifigFLAKSGLVPFHTWLPAayakapsvvsaLLSGTVLNIGI----YGILRLSALLRQSGAAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 77020020 150 PF--ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK08676 271 QFsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-190 |
3.22e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 45.66 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 50 PRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQQM--THPFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTG 127
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGS 218
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 77020020 128 LILSTW-QKLAPFALLLQIQPADpfILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMM 190
Cdd:PRK12668 219 VFLSAFtTKTAVYALARAFPGTE--LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMV 280
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
9-191 |
3.84e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.46 E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 9 LLFGLGLGTTITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEI-- 86
Cdd:PRK06473 112 LLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdy 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 87 -QQMTHPFPTTM-------IILALALKVGLAPMHSWLPE-----------VLQGLSLTTG----------LILSTWQKLA 137
Cdd:PRK06473 192 ePLRSHTLPLSTqllllapILVGFGIKIPLVPFHTWLPDahveastpvsvLLAGVLLKLGtygllrfgvgLFPEAWVYLA 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 77020020 138 PFalllqiqpadpfiLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK06473 272 PW-------------LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILL 312
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-191 |
1.52e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.55 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 55 ATTKYFLTQATAAAMLLFASTTNAWLTGQWEI---QQMTHPFPT-------TMIILALALKVGLAPMHSWLPEVLQGLSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdydAISTQNLSLntqlillTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 77020020 125 TTGLILS-TWQKLAPFALL---LQIQPADPFI----LITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK07363 238 AVAILLGgVLAKLGTYGLLrfgLQLFPQTWSLvapgLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILV 312
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
152-193 |
1.98e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 43.22 E-value: 1.98e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 77020020 152 ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMMLIL 193
Cdd:COG1009 277 VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-193 |
3.35e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.22 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 98 IILALALKVGLAPMHSWLPEV-----LQGLSLTTGLILstwqKLAPFALLLQIQPADPF-------ILITLGLTSTLVGG 165
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILL----KLGGYGLVRLSWPILPLgaqnlapAVIAMGIVGIVYGS 311
|
90 100
....*....|....*....|....*...
gi 77020020 166 WGGLNQTQLRKILAYSSIAHLGWMMLIL 193
Cdd:MTH00226 312 FATCRQIDVKRLVAYSSVAHMGLVSITL 339
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
78-190 |
4.65e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.82 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 78 AWL---TGQWEIQQMTHPFPTTMI-----ILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQP-- 147
Cdd:MTH00066 185 AWLamnTNSWELQQIFLLNDNSTLpllglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPll 264
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 77020020 148 -ADPFILIT---LGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMM 190
Cdd:MTH00066 265 eNNQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMM 311
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-262 |
5.97e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 41.53 E-value: 5.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 51 RAVEATTKYFLTQATAAAMLLFASTtnaWLTGQ-------WEI------QQMTHPFPT----TMIILALALKVGLAPMHS 113
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFS---WLYGLsggeielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQ 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 114 WLPEVLQGLSLTTGLILSTWQKLAPFALLLQI--------QPADPFILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAH 185
Cdd:CHL00049 236 WTPDVYEGSPTPVVAFLSVTSKVAASALATRIfdipfyfsSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 186 LGWMML-ILQFSP----TITLLTLITYLLMTTSTF---LVFKLNKAT-NIATLAISWTKTPALTSLTPLILLSLGGLPPL 256
Cdd:CHL00049 316 IGYVIIgIIVGDSndgyASMITYMLFYIFMNLGTFaciVLFGLRTGTdNIRDYAGLYTKDPFLALSLALCLLSLGGIPPL 395
|
....*.
gi 77020020 257 TGFMPK 262
Cdd:CHL00049 396 AGFFGK 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-191 |
1.06e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 40.71 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 19 ITFTSSHWLLAWMGLEINTLAIIPLMTQHHHPRAVEATTKYFLTQATA------AAMLLFASTTNAWLTGQweiqQMTHP 92
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAmlfyliGAVLVYQANGTFAFSGL----ATADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 93 FPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILS-TWQKLAPFALL---LQIQPADPfILITLGLTSTLVGGWGG 168
Cdd:PRK07234 185 EAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVrcaLDVPGLDL-IVRIFGVGTALLGVLFA 263
|
170 180
....*....|....*....|...
gi 77020020 169 LNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK07234 264 LLEKDLKRMLAFSTISQLGFILA 286
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-196 |
1.34e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.58 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 48 HHPRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQWEIQQM-----------THPFPTTMIILAL---ALKVGLAPMHS 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselienikGHPLFLITLILIFigaAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 114 WLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQP-----ADPFILIT-LGLTSTLVGGWGGLNQTQLRKILAYSSIAHLG 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPifsgtEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
....*....
gi 77020020 188 WMMLILQFS 196
Cdd:PRK12649 316 YLMTMYGYT 324
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-193 |
1.60e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.29 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 99 ILALAL-KVGLAPMHSWLPE-----------------VLQGLSLTTglilstwqKLAP-FALLLQIQPadpfILITLGLT 159
Cdd:PRK12644 209 ILVGALsKSAIVPFHFWLPGamaaptpvsaylhaaamVKAGIYLVA--------RLAPgFADVPVWRP----TVLVLGLA 276
|
90 100 110
....*....|....*....|....*....|....
gi 77020020 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMMLIL 193
Cdd:PRK12644 277 TMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLV 310
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-191 |
1.89e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.01 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 110 PMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPAD---PFILITLGLTSTL---VGGWGGLNQTQLRKILAYSSI 183
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeqfPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
....*...
gi 77020020 184 AHLGWMML 191
Cdd:PRK07376 325 SQLGYMVM 332
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-191 |
3.40e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 100 LALALKVGLAPMHSWLPE-----------VLQGLSLTTG---LILSTWqKLAPFAlllqIQPADPFILiTLGLTSTLVGG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQahveapvagsvILAGVLLKLGgygFIRFSW-PLLPEA----SEYFSPLIQ-TLSLLAIIYGS 287
|
90 100
....*....|....*....|....*.
gi 77020020 166 WGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVTL 313
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-190 |
3.81e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.35 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 92 PFPTTMIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQP----ADPFILI--TLGLTSTLVGG 165
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPllglSNMYIYIvtFVGLITMLFGS 289
|
90 100
....*....|....*....|....*
gi 77020020 166 WGGLNQTQLRKILAYSSIAHLGWMM 190
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIM 314
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-196 |
4.65e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.90 E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 111 MHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQP---ADPFILITLGLTSTL---VGGWGGLNQTQLRKILAYSSIA 184
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfeQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCS 308
|
90
....*....|..
gi 77020020 185 HLGWMMLILQFS 196
Cdd:MTH00020 309 QLGYMVVACGLS 320
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-191 |
5.49e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.47 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 55 ATTKYFLTQATAAAMLLFASTTNAWLTGQ--WEIQQMTH-PFPTTMIILALA-------LKVGLAPMHSWLPEVLQGLSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAkSYPLALELLLYAgfliafgVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 77020020 125 TTGLILS-TWQKLAPFALL---LQIQPADPF----ILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMML 191
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIrfnVQMLPDAHVyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-189 |
8.23e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 38.10 E-value: 8.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 110 PMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPA---DP---FILITLGLTSTLVGGWGGLNQTQLRKILAYSSI 183
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVfhdVAvwnWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
....*.
gi 77020020 184 AHLGWM 189
Cdd:PRK12650 306 SQLGWI 311
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-262 |
8.90e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 37.72 E-value: 8.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 50 PRAVEATTKYFLTQATAAAMLLFASTTNAWLTGQW----EIQQMTHPFPTTMIILAL-------ALKVGLAPMHSWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGStqlsAIALALITSPSLGLALALvfviagiAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 119 LQGLSLTTGLILSTWQKLAPFALLLQI-QPADP-------FILITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMM 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLlVTAFPsfdeqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 191 LILQF-------SPTITLLTLITYLLMTTSTFLVFKLNKATN-IATLAISWTKTPALTSLTPLILLSLGGLPPLTGFMPK 262
Cdd:PRK02504 317 IGLVAgteagyaSMVFYLLAYLFMNLGAFACVILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
97-196 |
9.98e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.16 E-value: 9.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 77020020 97 MIILALALKVGLAPMHSWLPEVLQGLSLTTGLILSTWQKLAPFALLLQIQPADPFILITLGLTSTLVGGWgglNQTQLRK 176
Cdd:MTH00091 62 FQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQMF---LLKSYKN 138
|
90 100
....*....|....*....|
gi 77020020 177 ILAYSSIAHLGWMMLILQFS 196
Cdd:MTH00091 139 LLILSSTESFNWLILSFFFS 158
|
|
|