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Conserved domains on  [gi|2091526577|ref|YP_010164369|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Scyra compressipes]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 7-93 4.20e-19

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 74.42  E-value: 4.20e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577  7 LLSGSLFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSH 86
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*..
gi 2091526577 87 GNDQFSS 93
Cdd:MTH00162  83 GNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 7-93 4.20e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 74.42  E-value: 4.20e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577  7 LLSGSLFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSH 86
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*..
gi 2091526577 87 GNDQFSS 93
Cdd:MTH00162  83 GNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-96 1.88e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.86  E-value: 1.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577  6 VLLSGSLFMVLCGLWGFISNyKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEI--YFSLFFLTFAACEGVLGLSLLILIV 83
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLR-RNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 2091526577 84 RSHGNDQFSSFNL 96
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 7-93 4.20e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 74.42  E-value: 4.20e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577  7 LLSGSLFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSH 86
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*..
gi 2091526577 87 GNDQFSS 93
Cdd:MTH00162  83 GNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 11-96 8.63e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 58.45  E-value: 8.63e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 11 SLFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSHGNDQ 90
Cdd:MTH00188   9 ILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDY 88


                 ....*.
gi 2091526577 91 FSSFNL 96
Cdd:MTH00188  89 VSSLNL 94
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 11-96 1.96e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 54.85  E-value: 1.96e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 11 SLFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSHGNDQ 90
Cdd:MTH00149   9 SLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDY 88


                 ....*.
gi 2091526577 91 FSSFNL 96
Cdd:MTH00149  89 VSSLSS 94
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 18-96 2.92e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 49.58  E-value: 2.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 18 GLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFS--LFFLTFAACEGVLGLSLLILIVRSHGNDQFSSFN 95
Cdd:MTH00126  15 GLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLN 94


                 .
gi 2091526577 96 L 96
Cdd:MTH00126  95 L 95
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 14-96 3.34e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 49.22  E-value: 3.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 14 MVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFSL--FFLTFAACEGVLGLSLLILIVRSHGNDQF 91
Cdd:MTH00067  11 AFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLpmFMLTFSACEASTGLALMVATTRTHGTDHL 90


                 ....*
gi 2091526577 92 SSFNL 96
Cdd:MTH00067  91 KNLNL 95
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 21-96 1.87e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 47.53  E-value: 1.87e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2091526577 21 GFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLG--SEIYFSLFFLTFAACEGVLGLSLLILIVRSHGNDQFSSFNL 96
Cdd:MTH00125  18 GLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQtpSFTPMPIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNL 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 12-96 1.46e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 44.93  E-value: 1.46e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 12 LFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSL--QMTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSHGND 89
Cdd:MTH00181   6 ISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALfsLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTHGSD 85


                 ....*..
gi 2091526577 90 QFSSFNL 96
Cdd:MTH00181  86 HLLKFNL 92
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-96 1.88e-07

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 44.86  E-value: 1.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577  6 VLLSGSLFMVLCGLWGFISNyKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEI--YFSLFFLTFAACEGVLGLSLLILIV 83
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLR-RNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 2091526577 84 RSHGNDQFSSFNL 96
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 12-96 3.71e-07

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 44.14  E-value: 3.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2091526577 12 LFMVLCGLWGFISNYKHLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIY--FSLFFLTFAACEGVLGLSLLILIVRSHGND 89
Cdd:MTH00043   9 LSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNHNSD 88


                 ....*..
gi 2091526577 90 QFSSFNL 96
Cdd:MTH00043  89 LVASLNL 95
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 22-93 7.02e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 40.89  E-value: 7.02e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2091526577 22 FISNYKHLLNTLLSLEFLMLGIFWLVSLQ-MTSLGSEIYFSLFFLTFAACEGVLGLSLLILIVRSHGNDQFSS 93
Cdd:MTH00013  19 LSLQRKHLLMSLLSLEAMILSLALFIPLSlMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKS 91
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 28-96 7.74e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 40.68  E-value: 7.74e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2091526577 28 HLLNTLLSLEFLMLGIFWLVSLQMTSLGSEIYFS--LFFLTFAACEGVLGLSLLILIVRSHGNDQFSSFNL 96
Cdd:MTH00107  25 HLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNL 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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